Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0010255

Physical Location & Seq

Genomic Coordinates Forward (+)

89186183 .. 89189986

Gene Structure 3804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG683500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGGCGAGCAGGTACTGGGTGGTGTCTCTGCCTGTCCAAAACTCGGCGTCGTCTTTATGGAACCGCCTCCAGGATCAAATCTCCAAGCATTCCTTCGACACTCCCCTCTACAGATTCAATATTCCCAATCTCCGCGTCGGAACCCTCGATTCTCTTCTCTCCCTCAGCGACGATCTCTTAAAGTCCAACAACTTCGTAGAGGGTGTTTCTCACAAGATCAGGCGCCAGATCGAGGACCTAGAGAAGGTTTCTGGAGTCGAGAGCAGCTCTCTCACCGTGGATGGAGTACCAGTCGATTCATACCTCACTAGGTTCGTTTGGGATGAAGCTAAGTTCCCGACAATGTCTCCTTTGAAGGAGGTCATCGACAGCATTCATGGTCAAGTTGCAAAGATCGAGGATGATCTCAAGGTTCGGGTAGCTGAGTATAACAATGTTCGCAGTCAACTTAATGCTATCAACCGAAAGCAGAGTGGAAGCTTAGCAGTCCGTGATCTTTCCAATTTAGTGAAATCAGAGGACATCGTTGTCTCGGAACATCTGGTGACCCTCCTTGCAATTGTTCCCAAGTACTCTCAGAAGGATTGGCTGTCAAGCTATGAGACCTTGACTAGTTATGTGGTCCCTAGGTCCTCTAAGAAGTTGTTTGAAGATAACGAATATGCTCTTTACAGTGTAACACTGTTTGGTCGAGTTGCAGATAATTTTAGAACAAGCGCTCGTGAAAAGGGATTCCAAATTCGTGATTTTGAATATAGTTCTGAAGCACAAGAAAGTCGAAAGCAGGAGTTGGAAAAATTGGTACAAGACCAAGAAAATTTAAGAAGCTCGCTTTTGCAGTGGTGCTATACCAGTTATGGGGAGGTGTTCAGCTCCTGGATGCATTTTTGTGCTGTACGTGTGTTTGCTGAGAGTATTCTGAGATATGGCTTACCACCATCTTTCTTGGCATGTGTTTTAGCTCCAGTTACAAAAAGTGAGAAGAAAGTACGATCAATCCTTGAGGGGCTGTGCGACAGTTCTAACAGTACTTTCTGGAAAACTGAAGATGAAGTGGGGGGAGGGATGGCTGGTCTAGCAGGTGATGCGGATGCACATCCGTATGTTTCATTTACAATCAATCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000221 GO:0000325 GO:0000902 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008553 GO:0009507 GO:0009536 GO:0009653 GO:0009826 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016049 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031090 GO:0032502 GO:0032989 GO:0032991 GO:0033176 GO:0033178 GO:0033180 GO:0034220 GO:0036442 GO:0040007 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0071840 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098796 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323

Pfam Domains

Protein Families

V-ATPase_C

Protein Analysis

376

Amino Acids

42.49

Weight (kDa)

5.55

Isoelectric Point (pI)

50.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
V-ATPase_C	PF03223	5 - 369	3.1e-129	V-ATPase subunit C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12840
fragaria_vesca	FvH4_6g54180 FvH4_6g54180 FvH4_6g54180
malus_domestica	MD09G1004500.v1.1 MD17G1008500.v1.1
prunus_persica	Prupe.3G312200_v2.0.a1 Prupe.3G312200_v2.0.a1
pyrus_communis	pycom111g00330 pycom17g00350
rosa_chinensis	RchiOBHm_Chr2g0176361
rosa_laevigata	RLG00000022406
rosa_multiflora	Rmu_sc0009140.1_g000001 Rmu_sc0027060.1_g000004 Rmu_sc0035399.1_g000001
rosa_roxburghii	Rroxscaffold_2G00076540
rosa_rugosa	Rorug02G0593500
rosa_samantha	Rh2AG672000 Rh2BG683500 Rh2DG697000
rosa_wichuraiana	Rw2G055110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1070
AasI	GACNNNNNNGTC	1 cut(s)	527
Acc36I	ACCTGC	1 cut(s)	1070
AccB1I	GGYRCC	1 cut(s)	222
AccII	CGCG	1 cut(s)	135
AciI	CCGC	3 cut(s)	64, 133, 1088
AclWI	GGATC	1 cut(s)	81
AcsI	RAATTY	2 cut(s)	738, 817
AcuI	CTGAAG	2 cut(s)	783, 1065
AcyI	GRCGYC	2 cut(s)	47, 223
AfaI	GTAC	7 cut(s)	14, 288, 572, 804, 897, 990, 1030
AfeI	AGCGCT	1 cut(s)	718
AfiI	CCNNNNNNNGG	5 cut(s)	43, 70, 232, 244, 858
AflIII	ACRYGT	1 cut(s)	898
AgsI	TTSAA	4 cut(s)	118, 355, 650, 752
AhlI	ACTAGT	1 cut(s)	611
AjnI	CCWGG	2 cut(s)	69, 875
AjuI	GAANNNNNNNTTGG	2 cut(s)	77, 109
AluBI	AGCT	8 cut(s)	267, 329, 422, 480, 597, 828, 873, 962
AluI	AGCT	8 cut(s)	267, 329, 422, 480, 597, 828, 873, 962
Alw26I	GTCTC	4 cut(s)	30, 351, 535, 596
AlwI	GGATC	1 cut(s)	81
AlwNI	CAGNNNCTG	2 cut(s)	15, 876
Aor51HI	AGCGCT	1 cut(s)	718
ApeKI	GCWGC	1 cut(s)	264
ApoI	RAATTY	2 cut(s)	738, 817
AspA2I	CCTAGG	1 cut(s)	626
AspLEI	GCGC	2 cut(s)	225, 719
AspS9I	GGNCC	3 cut(s)	235, 622, 630
AsuHPI	GGTGA	3 cut(s)	265, 556, 1094
AvaII	GGWCC	3 cut(s)	235, 622, 630
AvrII	CCTAGG	1 cut(s)	626
BanI	GGYRCC	1 cut(s)	222
BauI	CACGAG	1 cut(s)	720
BbvCI	CCTCAGC	1 cut(s)	164
BbvI	GCAGC	1 cut(s)	276
BccI	CCATC	3 cut(s)	275, 946, 1060
BciT130I	CCWGG	2 cut(s)	71, 877
BcoDI	GTCTC	4 cut(s)	30, 351, 535, 596
BcuI	ACTAGT	1 cut(s)	611
BfaI	CTAG	5 cut(s)	239, 309, 612, 627, 1076
BfmI	CTRYAG	1 cut(s)	109
BfoI	RGCGCY	2 cut(s)	226, 720
BfuAI	ACCTGC	1 cut(s)	1070
BisI	GCNGC	1 cut(s)	265
BlnI	CCTAGG	1 cut(s)	626
BlpI	GCTNAGC	1 cut(s)	481
BlsI	GCNGC	1 cut(s)	266
BmcAI	AGTACT	2 cut(s)	572, 1030
Bme1390I	CCNGG	2 cut(s)	71, 877
Bme18I	GGWCC	3 cut(s)	235, 622, 630
BmgT120I	GGNCC	3 cut(s)	235, 622, 630
BmiI	GGNNCC	4 cut(s)	62, 142, 224, 624
BmrFI	CCNGG	2 cut(s)	71, 877
BmrI	ACTGGG	1 cut(s)	25
BmsI	GCATC	3 cut(s)	870, 1075, 1081
BmuI	ACTGGG	1 cut(s)	25
BplI	GAGNNNNNCTC	4 cut(s)	251, 283, 253, 285
BpmI	CTGGAG	3 cut(s)	53, 273, 948
Bpu10I	CCTNAGC	1 cut(s)	164
Bpu1102I	GCTNAGC	1 cut(s)	481
BpuEI	CTTGAG	2 cut(s)	392, 1022
BsaAI	YACGTR	1 cut(s)	899
BsaBI	GATNNNNATC	1 cut(s)	1095
BsaHI	GRCGYC	2 cut(s)	47, 223
BsaI	GGTCTC	1 cut(s)	596
BsaJI	CCNNGG	2 cut(s)	276, 626
BsaXI	ACNNNNNCTCC	4 cut(s)	276, 306, 331, 361
Bsc4I	CCNNNNNNNGG	5 cut(s)	43, 70, 232, 244, 858
Bse1I	ACTGG	4 cut(s)	20, 290, 852, 965
Bse8I	GATNNNNATC	1 cut(s)	1095
BseBI	CCWGG	2 cut(s)	71, 877
BseDI	CCNNGG	2 cut(s)	276, 626
BseGI	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BseJI	GATNNNNATC	1 cut(s)	1095
BseLI	CCNNNNNNNGG	5 cut(s)	43, 70, 232, 244, 858
BseMII	CTCAG	5 cut(s)	178, 414, 590, 900, 911
BseNI	ACTGG	4 cut(s)	20, 290, 852, 965
BseXI	GCAGC	1 cut(s)	276
Bsh1236I	CGCG	1 cut(s)	135
BshNI	GGYRCC	1 cut(s)	222
BslFI	GGGAC	1 cut(s)	608
BslI	CCNNNNNNNGG	5 cut(s)	43, 70, 232, 244, 858
BsmAI	GTCTC	4 cut(s)	30, 351, 535, 596
BsmFI	GGGAC	1 cut(s)	608
BsmI	GAATGC	2 cut(s)	88, 372
Bso31I	GGTCTC	1 cut(s)	596
Bsp143I	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
Bsp1720I	GCTNAGC	1 cut(s)	481
BspACI	CCGC	3 cut(s)	64, 133, 1088
BspCNI	CTCAG	5 cut(s)	177, 415, 589, 901, 912
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	4 cut(s)	62, 142, 224, 624
BspMI	ACCTGC	1 cut(s)	1070
BspPI	GGATC	1 cut(s)	81
BspT107I	GGYRCC	1 cut(s)	222
BspTNI	GGTCTC	1 cut(s)	596
BsrI	ACTGG	4 cut(s)	20, 290, 852, 965
BssECI	CCNNGG	2 cut(s)	276, 626
BssMI	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
BssNI	GRCGYC	2 cut(s)	47, 223
BssSI	CACGAG	1 cut(s)	720
BssT1I	CCWWGG	1 cut(s)	626
Bst2BI	CACGAG	1 cut(s)	720
Bst2UI	CCWGG	2 cut(s)	71, 877
Bst4CI	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
Bst6I	CTCTTC	1 cut(s)	159
BstACI	GRCGYC	2 cut(s)	47, 223
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstBAI	YACGTR	1 cut(s)	899
BstC8I	GCNNGC	2 cut(s)	7, 830
BstDEI	CTNAG	8 cut(s)	164, 330, 423, 481, 576, 636, 909, 920
BstDSI	CCRYGG	1 cut(s)	276
BstEII	GGTNACC	1 cut(s)	544
BstENI	CCTNNNNNAGG	1 cut(s)	242
BstF5I	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BstFNI	CGCG	1 cut(s)	135
BstH2I	RGCGCY	2 cut(s)	226, 720
BstHHI	GCGC	2 cut(s)	225, 719
BstKTI	GATC	8 cut(s)	76, 175, 219, 231, 396, 406, 496, 995
BstMAI	GTCTC	4 cut(s)	30, 351, 535, 596
BstMBI	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
BstMWI	GCNNNNNNNGC	2 cut(s)	1076, 1085
BstNI	CCWGG	2 cut(s)	71, 877
BstNSI	RCATGY	1 cut(s)	954
BstPI	GGTNACC	1 cut(s)	544
BstSCI	CCNGG	2 cut(s)	69, 875
BstSFI	CTRYAG	1 cut(s)	109
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	1 cut(s)	276
BtgI	CCRYGG	1 cut(s)	276
BtsCI	GGATG	7 cut(s)	286, 328, 406, 885, 1071, 1096, 1096
BtsI	GCAGTG	1 cut(s)	845
BtsIMutI	CAGTG	3 cut(s)	679, 680, 845
BveI	ACCTGC	1 cut(s)	1070
Cac8I	GCNNGC	2 cut(s)	7, 830
CaiI	CAGNNNCTG	2 cut(s)	15, 876
CfoI	GCGC	2 cut(s)	225, 719
Cfr13I	GGNCC	3 cut(s)	235, 622, 630
CseI	GACGC	2 cut(s)	36, 124
Csp6I	GTAC	7 cut(s)	13, 287, 571, 803, 896, 989, 1029
CviAII	CATG	2 cut(s)	377, 951
CviQI	GTAC	7 cut(s)	13, 287, 571, 803, 896, 989, 1029
DdeI	CTNAG	8 cut(s)	164, 330, 423, 481, 576, 636, 909, 920
DinI	GGCGCC	1 cut(s)	224
DpnI	GATC	8 cut(s)	75, 174, 218, 230, 395, 405, 495, 994
DpnII	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
DrdI	GACNNNNNNGTC	1 cut(s)	527
DseDI	GACNNNNNNGTC	1 cut(s)	527
Eam1104I	CTCTTC	1 cut(s)	159
EarI	CTCTTC	1 cut(s)	159
Eco130I	CCWWGG	1 cut(s)	626
Eco31I	GGTCTC	1 cut(s)	596
Eco47I	GGWCC	3 cut(s)	235, 622, 630
Eco47III	AGCGCT	1 cut(s)	718
Eco57I	CTGAAG	2 cut(s)	783, 1065
Eco91I	GGTNACC	1 cut(s)	544
EcoNI	CCTNNNNNAGG	1 cut(s)	242
EcoO109I	RGGNCCY	2 cut(s)	235, 630
EcoO65I	GGTNACC	1 cut(s)	544
EcoRII	CCWGG	2 cut(s)	69, 875
EcoT14I	CCWWGG	1 cut(s)	626
EcoT22I	ATGCAT	1 cut(s)	885
EgeI	GGCGCC	1 cut(s)	224
EheI	GGCGCC	1 cut(s)	224
ErhI	CCWWGG	1 cut(s)	626
FaeI	CATG	2 cut(s)	380, 954
FalI	AAGNNNNNCTT	2 cut(s)	77, 109
FaqI	GGGAC	1 cut(s)	608
FatI	CATG	2 cut(s)	376, 950
Fnu4HI	GCNGC	1 cut(s)	265
FokI	GGATG	7 cut(s)	293, 335, 413, 892, 1078, 1083, 1103
Fsp4HI	GCNGC	1 cut(s)	265
FspBI	CTAG	5 cut(s)	239, 309, 612, 627, 1076
GlaI	GCGC	2 cut(s)	224, 718
GluI	GCNGC	1 cut(s)	265
GsuI	CTGGAG	3 cut(s)	53, 273, 948
HaeII	RGCGCY	2 cut(s)	226, 720
HgaI	GACGC	2 cut(s)	36, 124
HhaI	GCGC	2 cut(s)	225, 719
Hin1I	GRCGYC	2 cut(s)	47, 223
Hin1II	CATG	2 cut(s)	380, 954
Hin6I	GCGC	2 cut(s)	223, 717
HinP1I	GCGC	2 cut(s)	223, 717
HincII	GTYRAC	1 cut(s)	446
HindII	GTYRAC	1 cut(s)	446
HindIII	AAGCTT	1 cut(s)	478
HinfI	GANTC	5 cut(s)	114, 149, 255, 296, 732
HphI	GGTGA	3 cut(s)	265, 556, 1094
Hpy166II	GTNNAC	1 cut(s)	446
Hpy188I	TCNGA	6 cut(s)	140, 517, 535, 579, 763, 921
Hpy188III	TCNNGA	6 cut(s)	252, 259, 337, 722, 743, 1036
Hpy8I	GTNNAC	1 cut(s)	446
Hpy99I	CGWCG	3 cut(s)	52, 140, 173
HpyAV	CCTTC	4 cut(s)	103, 238, 349, 574
HpyCH4III	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
HpyCH4IV	ACGT	1 cut(s)	898
HpyCH4V	TGCA	6 cut(s)	389, 557, 698, 838, 883, 1094
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1076, 1085
HpyF3I	CTNAG	8 cut(s)	164, 330, 423, 481, 576, 636, 909, 920
HpySE526I	ACGT	1 cut(s)	898
Hsp92I	GRCGYC	2 cut(s)	47, 223
Hsp92II	CATG	2 cut(s)	380, 954
HspAI	GCGC	2 cut(s)	223, 717
KasI	GGCGCC	1 cut(s)	222
Kzo9I	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
LmnI	GCTCC	2 cut(s)	878, 967
Lsp1109I	GCAGC	1 cut(s)	276
LweI	GCATC	3 cut(s)	870, 1075, 1081
MaeI	CTAG	5 cut(s)	239, 309, 612, 627, 1076
MaeII	ACGT	1 cut(s)	898
MaeIII	GTNAC	3 cut(s)	544, 676, 967
MalI	GATC	8 cut(s)	75, 174, 218, 230, 395, 405, 495, 994
MboI	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
MboII	GAAGA	4 cut(s)	146, 662, 994, 1058
MfeI	CAATTG	1 cut(s)	558
MluCI	AATT	6 cut(s)	502, 558, 703, 738, 797, 817
Mly113I	GGCGCC	1 cut(s)	223
MlyI	GAGTC	1 cut(s)	264
MmeI	TCCRAC	3 cut(s)	118, 210, 771
Mph1103I	ATGCAT	1 cut(s)	885
MseI	TTAA	3 cut(s)	179, 450, 821
MslI	CAYNNNNRTG	2 cut(s)	888, 1101
MspR9I	CCNGG	2 cut(s)	71, 877
MunI	CAATTG	1 cut(s)	558
Mva1269I	GAATGC	2 cut(s)	88, 372
MvaI	CCWGG	2 cut(s)	71, 877
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	2 cut(s)	1076, 1085
NarI	GGCGCC	1 cut(s)	223
NdeII	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
NlaIII	CATG	2 cut(s)	380, 954
NlaIV	GGNNCC	4 cut(s)	62, 142, 224, 624
NmeAIII	GCCGAG	1 cut(s)	23
NmuCI	GTSAC	1 cut(s)	544
NsiI	ATGCAT	1 cut(s)	885
NspI	RCATGY	1 cut(s)	954
PaqCI	CACCTGC	1 cut(s)	1070
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	2 cut(s)	88, 372
PfeI	GAWTC	4 cut(s)	114, 149, 296, 732
PflFI	GACNNNGTC	1 cut(s)	343
PfoI	TCCNGGA	2 cut(s)	69, 875
PkrI	GCNGC	1 cut(s)	266
PleI	GAGTC	1 cut(s)	263
PluTI	GGCGCC	1 cut(s)	226
PpsI	GAGTC	1 cut(s)	263
Ppu21I	YACGTR	1 cut(s)	899
PpuMI	RGGWCCY	2 cut(s)	235, 630
Psp5II	RGGWCCY	2 cut(s)	235, 630
Psp6I	CCWGG	2 cut(s)	69, 875
PspEI	GGTNACC	1 cut(s)	544
PspGI	CCWGG	2 cut(s)	69, 875
PspN4I	GGNNCC	4 cut(s)	62, 142, 224, 624
PspPI	GGNCC	3 cut(s)	235, 622, 630
PspPPI	RGGWCCY	2 cut(s)	235, 630
PstNI	CAGNNNCTG	2 cut(s)	15, 876
PsyI	GACNNNGTC	1 cut(s)	343
RsaI	GTAC	7 cut(s)	14, 288, 572, 804, 897, 990, 1030
RsaNI	GTAC	7 cut(s)	13, 287, 571, 803, 896, 989, 1029
RseI	CAYNNNNRTG	2 cut(s)	888, 1101
SaqAI	TTAA	3 cut(s)	179, 450, 821
SatI	GCNGC	1 cut(s)	265
Sau3AI	GATC	8 cut(s)	73, 172, 216, 228, 393, 403, 493, 992
Sau96I	GGNCC	3 cut(s)	235, 622, 630
ScaI	AGTACT	2 cut(s)	572, 1030
SchI	GAGTC	1 cut(s)	264
ScrFI	CCNGG	2 cut(s)	71, 877
SfaNI	GCATC	3 cut(s)	870, 1075, 1081
SfcI	CTRYAG	1 cut(s)	109
SfoI	GGCGCC	1 cut(s)	224
SinI	GGWCC	3 cut(s)	235, 622, 630
SmiMI	CAYNNNNRTG	2 cut(s)	888, 1101
SmlI	CTYRAG	2 cut(s)	407, 1001
SmoI	CTYRAG	2 cut(s)	407, 1001
SpeI	ACTAGT	1 cut(s)	611
Sse9I	AATT	6 cut(s)	502, 558, 703, 738, 797, 817
SsiI	CCGC	3 cut(s)	64, 133, 1088
SspDI	GGCGCC	1 cut(s)	222
SspI	AATATT	1 cut(s)	121
SspMI	CTAG	5 cut(s)	239, 309, 612, 627, 1076
StyD4I	CCNGG	2 cut(s)	69, 875
StyI	CCWWGG	1 cut(s)	626
TaaI	ACNGT	5 cut(s)	277, 674, 684, 1019, 1028
TaiI	ACGT	1 cut(s)	901
TaqI	TCGA	9 cut(s)	96, 147, 231, 258, 294, 366, 396, 691, 778
TasI	AATT	6 cut(s)	502, 558, 703, 738, 797, 817
TatI	WGTACW	2 cut(s)	570, 1028
TfiI	GAWTC	4 cut(s)	114, 149, 296, 732
Tru1I	TTAA	3 cut(s)	179, 450, 821
Tru9I	TTAA	3 cut(s)	179, 450, 821
TscAI	CASTG	3 cut(s)	679, 687, 845
TseFI	GTSAC	1 cut(s)	544
TseI	GCWGC	1 cut(s)	264
Tsp45I	GTSAC	1 cut(s)	544
TspDTI	ATGAA	5 cut(s)	288, 339, 365, 1065, 1098
TspGWI	ACGGA	2 cut(s)	479, 1089
TspRI	CASTG	3 cut(s)	679, 687, 845
Tth111I	GACNNNGTC	1 cut(s)	343
VpaK11BI	GGWCC	3 cut(s)	235, 622, 630
XagI	CCTNNNNNAGG	1 cut(s)	242
XapI	RAATTY	2 cut(s)	738, 817
XceI	RCATGY	1 cut(s)	954
XmaJI	CCTAGG	1 cut(s)	626
XspI	CTAG	5 cut(s)	239, 309, 612, 627, 1076
ZrmI	AGTACT	2 cut(s)	572, 1030
Zsp2I	ATGCAT	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.