Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0011933

Physical Location & Seq

Genomic Coordinates Forward (+)

11764607 .. 11766502

Gene Structure 1896 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022759

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGATTGGTGCCATTTCTGTATCAAAAACTAGCATAACCGTGACTTGTTCAGTCTCCGGCATTCTTCAAAAACCCAGCAAACCTCTAACTCCCTCAACTCTCAAATGGCTTGCAAAATCCGGCAAACTAGAAGAGGCCATTCGCCTGATCGAAGCCTTACCCTCCAAATTGACGGCCGCCGAGTCCGACATCGGGGCCTACTCCCTCCTCCTCCACACCTGTATCCCCCAAAAATCATTAGAGCATGGCCAGAGGCTTTACCTACAGTTTCTTCTCTCAGAAGACAAAGTGAACCACAACCTCGTCAACAATCCCACCTTGAAAACCAAGCTCATTACTCTCTACTCTGTCTGCGGCCGAGTTGACGACGCCCACTCTGTTTTCGTCGACTTCTGGCTGGGGAATTTCACATTCTCGATGCCGTTGAAGGCCTGTGCAGAGTTGTCTGAGCTTAAAGTCGGGAGAGCCGTCCATGCCCAGATTGTGAAATCCAATGAAAAGCCGGATCAAGTGGTGAATAATGCTCTTCTGAGATTGTACTCAGAGCAGGGGTGCTTTGGGGATGCCTTGAAGGTGTTCGAAACAATGCCTCAACGAAACGTTGTTTCTTGGAACTCTTTGATTGAAAGTTTTGTTCTACGAGACCGAGTGTTTGAGTCACTCGAGTGTTTTAGAAGGATGCAAGGAGAGGGGATGGGGTTCACTTGGGTCACCCTCACCACAGTTTTACCAATCTGCGCTAGAATGACTGCACTATATAGTGGGAAGGAGATACATGCCCAGATAATCAAGTCCACCAAGATACCTGATAGGGTGTTTGACAATATGCACTGTAAAGATTTGACATCTTGGAATCCTGTTCTTACAGGGTATGCGGTGAATGGGTTTGTTGAACAAGGAATGATATTGTTTGATAAGATGGTGGAGTCTGGAATCAGACCAGACGGAGTGACCTTTATAGCTCTGTTATCTGGCTGTAGCCATGCGGGGCTTACTGACCAAGGACGGAGATTGTTTGATAAAATGAAGTTGGGTTATGGCATATCCCCAACTGTTGAGCATTATGCTTGTCTTCCGTCTGGAAGCATATGGGGTTCATTACTCAACTCATGCCGGCTCCAAGGCAAAGTTGCTCTTGCGGAGCGTGCTGCAATGGAGTTGTTTGAGCTTGAACCTAACAATCCCAGGAACTATGTGGTGCTCTCAAATGTTTATGCAAACGCAGGGATGTGGGAGGGCGTCAGTAGGGTTCGAGAACTTATGAAGGAGAGGGGACATAAAAAGGAGGCTGGATGCAGTTGGTTGCAAATGGGGAGTAGGATCCACACGTTTGTAGTGGGTGGGGGTTTTCAGTTTTGTAATTCAGTTGAGTTTAAGAAAGTTTGGAATGAATTGACGGATGCTATGGAAGAGGTTGGGTATATTGCTGACACAAGTGTTGTCTTACATGATGTAAATGAAGAAGTGAAATCGATGTGGGTTTGCGGGCACAGTGAAAGAGTAGCAATTACTTTTGCACTAGTTCACACTGCTGCTGGAATGCCAATTAGGATTACAAAGAATATTCGTATTTGTGCAGATTGCCACTCCTGGGTAAAAATAGTTTCAATGGTTACAGGTGGAGTCATTGTTTTGAGAGACACAAATCGCTTCCACCATTTCAAAGGAGGAGCATGTACTTGTAAGGACTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

566

Amino Acids

62.89

Weight (kDa)

8.44

Isoelectric Point (pI)

32.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	280 - 327	9.6e-09	PPR repeat family
PPR_3	PF13812	303 - 357	8.9e-07	Pentatricopeptide repeat domain
E_motif	PF20431	377 - 436	1.3e-20	E motif
DYW_deaminase	PF14432	473 - 565	2.3e-35	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011933)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14330
fragaria_vesca	FvH4_1g28620
malus_domestica	MD17G1262400.v1.1
prunus_persica	Prupe.3G163800_v2.0.a1
pyrus_communis	pycom17g26230
rosa_chinensis	RchiOBHm_Chr3g0492571
rosa_laevigata	RLG00000022759
rosa_multiflora	Rmu_sc0000831.1_g000061 Rmu_sc0008694.1_g000001
rosa_roxburghii	Rroxscaffold_4G00325000 Rroxscaffold_4G00325010
rosa_rugosa	Rorug03G0254500
rosa_samantha	Rh3BG340900 Rh3BG341000 Rh3BG341100 Rh3CG338400 Rh3DG340200 Rh3DG340300 Rh5BG302200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	8
AccI	GTMKAC	1 cut(s)	387
AciI	CCGC	6 cut(s)	177, 354, 875, 986, 1139, 1485
AclI	AACGTT	1 cut(s)	600
AclWI	GGATC	3 cut(s)	513, 1315, 1328
AcoI	YGGCCR	3 cut(s)	174, 247, 355
AcsI	RAATTY	1 cut(s)	403
AcyI	GRCGYC	2 cut(s)	369, 1239
AfaI	GTAC	2 cut(s)	539, 1678
AfiI	CCNNNNNNNGG	2 cut(s)	192, 1591
AflIII	ACRYGT	1 cut(s)	1326
AgsI	TTSAA	9 cut(s)	68, 322, 427, 571, 626, 893, 1172, 1608, 1663
AhlI	ACTAGT	1 cut(s)	1519
AjnI	CCWGG	2 cut(s)	1184, 1589
AleI	CACNNNNGTG	1 cut(s)	664
AluBI	AGCT	4 cut(s)	331, 451, 962, 1168
AluI	AGCT	4 cut(s)	331, 451, 962, 1168
Alw21I	GWGCWC	1 cut(s)	1203
Alw26I	GTCTC	3 cut(s)	58, 636, 1632
AlwI	GGATC	3 cut(s)	513, 1315, 1328
Ama87I	CYCGRG	1 cut(s)	662
AoxI	GGCC	6 cut(s)	135, 174, 195, 247, 355, 429
ApeKI	GCWGC	2 cut(s)	1148, 1532
ApoI	RAATTY	1 cut(s)	403
ArsI	GACNNNNNNTTYG	2 cut(s)	635, 667
Asp700I	GAANNNNTTC	1 cut(s)	575
AspLEI	GCGC	1 cut(s)	740
AspS9I	GGNCC	1 cut(s)	195
AsuHPI	GGTGA	4 cut(s)	526, 703, 709, 889
AsuII	TTCGAA	1 cut(s)	579
AvaI	CYCGRG	1 cut(s)	662
BaeGI	GKGCMC	1 cut(s)	1491
BaeI	ACNNNNGTAYC	2 cut(s)	205, 238
BalI	TGGCCA	1 cut(s)	249
BamHI	GGATCC	1 cut(s)	1320
BanI	GGYRCC	1 cut(s)	8
BbsI	GAAGAC	2 cut(s)	288, 1064
Bbv12I	GWGCWC	1 cut(s)	1203
BbvI	GCAGC	2 cut(s)	1135, 1519
BccI	CCATC	2 cut(s)	688, 913
BceAI	ACGGC	3 cut(s)	189, 406, 452
BciT130I	CCWGG	2 cut(s)	1186, 1591
BciVI	GTATCC	1 cut(s)	233
BcoDI	GTCTC	3 cut(s)	58, 636, 1632
BcuI	ACTAGT	1 cut(s)	1519
BfaI	CTAG	4 cut(s)	30, 128, 741, 1520
BfmI	CTRYAG	2 cut(s)	263, 976
BfuI	GTATCC	1 cut(s)	233
BisI	GCNGC	4 cut(s)	177, 355, 1149, 1533
BlsI	GCNGC	4 cut(s)	178, 356, 1150, 1534
Bme1390I	CCNGG	2 cut(s)	1186, 1591
BmeT110I	CYCGRG	1 cut(s)	662
BmgT120I	GGNCC	1 cut(s)	195
BmiI	GGNNCC	4 cut(s)	10, 196, 1118, 1322
BmrFI	CCNGG	2 cut(s)	1186, 1591
BmsI	GCATC	5 cut(s)	408, 553, 669, 1283, 1390
BpiI	GAAGAC	2 cut(s)	288, 1064
Bpu14I	TTCGAA	1 cut(s)	579
Bsa29I	ATCGAT	1 cut(s)	1472
BsaHI	GRCGYC	2 cut(s)	369, 1239
BsaI	GGTCTC	1 cut(s)	636
BsaJI	CCNNGG	4 cut(s)	1000, 1120, 1184, 1590
BsaXI	ACNNNNNCTCC	2 cut(s)	1614, 1644
Bsc4I	CCNNNNNNNGG	2 cut(s)	192, 1591
Bse118I	RCCGGY	1 cut(s)	1113
Bse1I	ACTGG	1 cut(s)	1697
Bse3DI	GCAATG	1 cut(s)	1158
BseBI	CCWGG	2 cut(s)	1186, 1591
BseCI	ATCGAT	1 cut(s)	1472
BseDI	CCNNGG	4 cut(s)	1000, 1120, 1184, 1590
BseGI	GGATG	6 cut(s)	568, 684, 699, 1233, 1298, 1405
BseLI	CCNNNNNNNGG	2 cut(s)	192, 1591
BseMI	GCAATG	1 cut(s)	1158
BseMII	CTCAG	4 cut(s)	291, 438, 521, 555
BseNI	ACTGG	1 cut(s)	1697
BseRI	GAGGAG	3 cut(s)	197, 200, 1683
BseSI	GKGCMC	1 cut(s)	1491
BseX3I	CGGCCG	2 cut(s)	174, 355
BseXI	GCAGC	2 cut(s)	1135, 1519
BseYI	CCCAGC	2 cut(s)	74, 397
BsgI	GTGCAG	3 cut(s)	456, 735, 1596
Bsh1285I	CGRYCG	2 cut(s)	177, 358
BshFI	GGCC	6 cut(s)	137, 176, 197, 249, 357, 431
BshNI	GGYRCC	1 cut(s)	8
BshVI	ATCGAT	1 cut(s)	1472
BsiEI	CGRYCG	2 cut(s)	177, 358
BsiHKAI	GWGCWC	1 cut(s)	1203
BsiHKCI	CYCGRG	1 cut(s)	662
BsiSI	CCGG	4 cut(s)	57, 120, 503, 1114
BslFI	GGGAC	1 cut(s)	1287
BslI	CCNNNNNNNGG	2 cut(s)	192, 1591
BsmAI	GTCTC	3 cut(s)	58, 636, 1632
BsmFI	GGGAC	1 cut(s)	1287
BsmI	GAATGC	2 cut(s)	60, 1545
BsnI	GGCC	6 cut(s)	137, 176, 197, 249, 357, 431
Bso31I	GGTCTC	1 cut(s)	636
BsoBI	CYCGRG	1 cut(s)	662
Bsp119I	TTCGAA	1 cut(s)	579
Bsp1286I	GDGCHC	2 cut(s)	1203, 1491
Bsp143I	GATC	3 cut(s)	147, 505, 1320
BspACI	CCGC	6 cut(s)	177, 354, 875, 986, 1139, 1485
BspANI	GGCC	6 cut(s)	137, 176, 197, 249, 357, 431
BspCNI	CTCAG	4 cut(s)	290, 439, 522, 554
BspDI	ATCGAT	1 cut(s)	1472
BspLI	GGNNCC	4 cut(s)	10, 196, 1118, 1322
BspPI	GGATC	3 cut(s)	513, 1315, 1328
BspQI	GCTCTTC	1 cut(s)	531
BspT104I	TTCGAA	1 cut(s)	579
BspT107I	GGYRCC	1 cut(s)	8
BspTNI	GGTCTC	1 cut(s)	636
BsrDI	GCAATG	1 cut(s)	1158
BsrFI	RCCGGY	1 cut(s)	1113
BsrI	ACTGG	1 cut(s)	1697
BssAI	RCCGGY	1 cut(s)	1113
BssECI	CCNNGG	4 cut(s)	1000, 1120, 1184, 1590
BssMI	GATC	3 cut(s)	147, 505, 1320
BssNI	GRCGYC	2 cut(s)	369, 1239
BssT1I	CCWWGG	2 cut(s)	1000, 1120
Bst2UI	CCWGG	2 cut(s)	1186, 1591
Bst4CI	ACNGT	6 cut(s)	40, 267, 724, 833, 1054, 1493
Bst6I	CTCTTC	3 cut(s)	126, 531, 1404
BstACI	GRCGYC	2 cut(s)	369, 1239
BstBI	TTCGAA	1 cut(s)	579
BstC8I	GCNNGC	4 cut(s)	111, 1115, 1146, 1487
BstDEI	CTNAG	4 cut(s)	277, 447, 530, 541
BstEII	GGTNACC	1 cut(s)	709
BstF5I	GGATG	6 cut(s)	568, 684, 699, 1233, 1298, 1405
BstHHI	GCGC	1 cut(s)	740
BstKTI	GATC	3 cut(s)	150, 508, 1323
BstMAI	GTCTC	3 cut(s)	58, 636, 1632
BstMBI	GATC	3 cut(s)	147, 505, 1320
BstMCI	CGRYCG	2 cut(s)	177, 358
BstMWI	GCNNNNNNNGC	2 cut(s)	473, 1145
BstNI	CCWGG	2 cut(s)	1186, 1591
BstNSI	RCATGY	2 cut(s)	779, 1677
BstPI	GGTNACC	1 cut(s)	709
BstSCI	CCNGG	2 cut(s)	1184, 1589
BstSFI	CTRYAG	2 cut(s)	263, 976
BstSLI	GKGCMC	1 cut(s)	1491
BstV1I	GCAGC	2 cut(s)	1135, 1519
BstV2I	GAAGAC	2 cut(s)	288, 1064
BstX2I	RGATCY	1 cut(s)	1320
BstYI	RGATCY	1 cut(s)	1320
BstZI	CGGCCG	2 cut(s)	174, 355
Bsu15I	ATCGAT	1 cut(s)	1472
BsuI	GTATCC	1 cut(s)	233
BsuRI	GGCC	6 cut(s)	137, 176, 197, 249, 357, 431
BsuTUI	ATCGAT	1 cut(s)	1472
BtsCI	GGATG	6 cut(s)	568, 684, 699, 1233, 1298, 1405
BtsI	GCAGTG	1 cut(s)	1527
BtsIMutI	CAGTG	3 cut(s)	829, 1498, 1527
Cac8I	GCNNGC	4 cut(s)	111, 1115, 1146, 1487
CfoI	GCGC	1 cut(s)	740
Cfr10I	RCCGGY	1 cut(s)	1113
Cfr13I	GGNCC	1 cut(s)	195
ClaI	ATCGAT	1 cut(s)	1472
CseI	GACGC	2 cut(s)	377, 1228
Csp6I	GTAC	2 cut(s)	538, 1677
CviAII	CATG	7 cut(s)	245, 473, 776, 983, 1110, 1448, 1674
CviQI	GTAC	2 cut(s)	538, 1677
DdeI	CTNAG	4 cut(s)	277, 447, 530, 541
DpnI	GATC	3 cut(s)	149, 507, 1322
DpnII	GATC	3 cut(s)	147, 505, 1320
EaeI	YGGCCR	3 cut(s)	174, 247, 355
EagI	CGGCCG	2 cut(s)	174, 355
Eam1104I	CTCTTC	3 cut(s)	126, 531, 1404
EarI	CTCTTC	3 cut(s)	126, 531, 1404
EclXI	CGGCCG	2 cut(s)	174, 355
Eco130I	CCWWGG	2 cut(s)	1000, 1120
Eco147I	AGGCCT	1 cut(s)	431
Eco31I	GGTCTC	1 cut(s)	636
Eco52I	CGGCCG	2 cut(s)	174, 355
Eco88I	CYCGRG	1 cut(s)	662
Eco91I	GGTNACC	1 cut(s)	709
EcoO109I	RGGNCCY	1 cut(s)	195
EcoO65I	GGTNACC	1 cut(s)	709
EcoRII	CCWGG	2 cut(s)	1184, 1589
EcoT14I	CCWWGG	2 cut(s)	1000, 1120
ErhI	CCWWGG	2 cut(s)	1000, 1120
FaeI	CATG	7 cut(s)	248, 476, 779, 986, 1113, 1451, 1677
FalI	AAGNNNNNCTT	2 cut(s)	1119, 1151
FaqI	GGGAC	1 cut(s)	1287
FatI	CATG	7 cut(s)	244, 472, 775, 982, 1109, 1447, 1673
FauI	CCCGC	2 cut(s)	979, 1478
FauNDI	CATATG	1 cut(s)	1088
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	4 cut(s)	177, 355, 1149, 1533
FokI	GGATG	6 cut(s)	575, 691, 706, 1240, 1305, 1412
Fsp4HI	GCNGC	4 cut(s)	177, 355, 1149, 1533
FspBI	CTAG	4 cut(s)	30, 128, 741, 1520
GlaI	GCGC	1 cut(s)	739
GluI	GCNGC	4 cut(s)	177, 355, 1149, 1533
GsaI	CCCAGC	2 cut(s)	78, 401
HaeIII	GGCC	6 cut(s)	137, 176, 197, 249, 357, 431
HapII	CCGG	4 cut(s)	57, 120, 503, 1114
HgaI	GACGC	2 cut(s)	377, 1228
HhaI	GCGC	1 cut(s)	740
Hin1I	GRCGYC	2 cut(s)	369, 1239
Hin1II	CATG	7 cut(s)	248, 476, 779, 986, 1113, 1451, 1677
Hin6I	GCGC	1 cut(s)	738
HinP1I	GCGC	1 cut(s)	738
HincII	GTYRAC	3 cut(s)	307, 364, 388
HindII	GTYRAC	3 cut(s)	307, 364, 388
HinfI	GANTC	6 cut(s)	182, 656, 853, 926, 933, 1623
HpaII	CCGG	4 cut(s)	57, 120, 503, 1114
HphI	GGTGA	4 cut(s)	526, 703, 709, 889
Hpy166II	GTNNAC	7 cut(s)	292, 307, 364, 388, 702, 795, 1525
Hpy188I	TCNGA	6 cut(s)	187, 280, 448, 531, 544, 938
Hpy188III	TCNNGA	5 cut(s)	415, 460, 930, 1080, 1253
Hpy8I	GTNNAC	7 cut(s)	292, 307, 364, 388, 702, 795, 1525
Hpy99I	CGWCG	2 cut(s)	371, 389
HpyAV	CCTTC	5 cut(s)	421, 565, 669, 760, 1258
HpyCH4III	ACNGT	6 cut(s)	40, 267, 724, 833, 1054, 1493
HpyCH4IV	ACGT	2 cut(s)	600, 1328
HpyF10VI	GCNNNNNNNGC	2 cut(s)	473, 1145
HpyF3I	CTNAG	4 cut(s)	277, 447, 530, 541
HpySE526I	ACGT	2 cut(s)	600, 1328
Hsp92I	GRCGYC	2 cut(s)	369, 1239
Hsp92II	CATG	7 cut(s)	248, 476, 779, 986, 1113, 1451, 1677
HspAI	GCGC	1 cut(s)	738
KroI	GCCGGC	1 cut(s)	1113
KroNI	GCCGGC	1 cut(s)	1115
Kzo9I	GATC	3 cut(s)	147, 505, 1320
LguI	GCTCTTC	1 cut(s)	531
LmnI	GCTCC	3 cut(s)	1122, 1141, 1670
Lsp1109I	GCAGC	2 cut(s)	1135, 1519
LweI	GCATC	5 cut(s)	408, 553, 669, 1283, 1390
MaeI	CTAG	4 cut(s)	30, 128, 741, 1520
MaeII	ACGT	2 cut(s)	600, 1328
MaeIII	GTNAC	5 cut(s)	40, 657, 709, 949, 1612
MalI	GATC	3 cut(s)	149, 507, 1322
MboI	GATC	3 cut(s)	147, 505, 1320
MboII	GAAGA	8 cut(s)	56, 143, 263, 293, 518, 1064, 1421, 1472
MflI	RGATCY	1 cut(s)	1320
MhlI	GDGCHC	2 cut(s)	1203, 1491
MlsI	TGGCCA	1 cut(s)	249
MluCI	AATT	6 cut(s)	167, 403, 1360, 1391, 1506, 1545
MluNI	TGGCCA	1 cut(s)	249
MlyI	GAGTC	4 cut(s)	191, 665, 935, 1632
MmeI	TCCRAC	1 cut(s)	210
Mox20I	TGGCCA	1 cut(s)	249
MroNI	GCCGGC	1 cut(s)	1113
MroXI	GAANNNNTTC	1 cut(s)	575
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	2 cut(s)	453, 1374
MslI	CAYNNNNRTG	2 cut(s)	38, 664
Msp20I	TGGCCA	1 cut(s)	249
MspI	CCGG	4 cut(s)	57, 120, 503, 1114
MspR9I	CCNGG	2 cut(s)	1186, 1591
Mva1269I	GAATGC	2 cut(s)	60, 1545
MvaI	CCWGG	2 cut(s)	1186, 1591
MwoI	GCNNNNNNNGC	2 cut(s)	473, 1145
NaeI	GCCGGC	1 cut(s)	1115
NdeI	CATATG	1 cut(s)	1088
NdeII	GATC	3 cut(s)	147, 505, 1320
NgoMIV	GCCGGC	1 cut(s)	1113
NlaIII	CATG	7 cut(s)	248, 476, 779, 986, 1113, 1451, 1677
NlaIV	GGNNCC	4 cut(s)	10, 196, 1118, 1322
NmeAIII	GCCGAG	2 cut(s)	205, 383
NmuCI	GTSAC	4 cut(s)	40, 657, 709, 949
NspI	RCATGY	2 cut(s)	779, 1677
NspV	TTCGAA	1 cut(s)	579
OliI	CACNNNNGTG	1 cut(s)	664
PaeR7I	CTCGAG	1 cut(s)	662
PceI	AGGCCT	1 cut(s)	431
PciSI	GCTCTTC	1 cut(s)	531
PcsI	WCGNNNNNNNCGW	1 cut(s)	465
PctI	GAATGC	2 cut(s)	60, 1545
PdiI	GCCGGC	1 cut(s)	1115
PdmI	GAANNNNTTC	1 cut(s)	575
PfeI	GAWTC	2 cut(s)	853, 933
PkrI	GCNGC	4 cut(s)	178, 356, 1150, 1534
PleI	GAGTC	4 cut(s)	190, 664, 934, 1631
PpsI	GAGTC	4 cut(s)	190, 664, 934, 1631
Psp1406I	AACGTT	1 cut(s)	600
Psp6I	CCWGG	2 cut(s)	1184, 1589
PspEI	GGTNACC	1 cut(s)	709
PspFI	CCCAGC	2 cut(s)	74, 397
PspGI	CCWGG	2 cut(s)	1184, 1589
PspN4I	GGNNCC	4 cut(s)	10, 196, 1118, 1322
PspPI	GGNCC	1 cut(s)	195
PspXI	VCTCGAGB	1 cut(s)	662
PsuI	RGATCY	1 cut(s)	1320
RsaI	GTAC	2 cut(s)	539, 1678
RsaNI	GTAC	2 cut(s)	538, 1677
RseI	CAYNNNNRTG	2 cut(s)	38, 664
SalI	GTCGAC	1 cut(s)	386
SapI	GCTCTTC	1 cut(s)	531
SaqAI	TTAA	2 cut(s)	453, 1374
SatI	GCNGC	4 cut(s)	177, 355, 1149, 1533
Sau3AI	GATC	3 cut(s)	147, 505, 1320
Sau96I	GGNCC	1 cut(s)	195
SchI	GAGTC	4 cut(s)	191, 665, 935, 1632
ScrFI	CCNGG	2 cut(s)	1186, 1591
SduI	GDGCHC	2 cut(s)	1203, 1491
SfaNI	GCATC	5 cut(s)	408, 553, 669, 1283, 1390
SfcI	CTRYAG	2 cut(s)	263, 976
Sfr274I	CTCGAG	1 cut(s)	662
SfuI	TTCGAA	1 cut(s)	579
SlaI	CTCGAG	1 cut(s)	662
SmiMI	CAYNNNNRTG	2 cut(s)	38, 664
SmlI	CTYRAG	1 cut(s)	662
SmoI	CTYRAG	1 cut(s)	662
SpeI	ACTAGT	1 cut(s)	1519
Sse9I	AATT	6 cut(s)	167, 403, 1360, 1391, 1506, 1545
SseBI	AGGCCT	1 cut(s)	431
SsiI	CCGC	6 cut(s)	177, 354, 875, 986, 1139, 1485
SspI	AATATT	1 cut(s)	1564
SspMI	CTAG	4 cut(s)	30, 128, 741, 1520
StuI	AGGCCT	1 cut(s)	431
StyD4I	CCNGG	2 cut(s)	1184, 1589
StyI	CCWWGG	2 cut(s)	1000, 1120
TaaI	ACNGT	6 cut(s)	40, 267, 724, 833, 1054, 1493
TaiI	ACGT	2 cut(s)	603, 1331
TaqI	TCGA	7 cut(s)	150, 387, 416, 579, 663, 1252, 1472
TaqII	GACCGA	1 cut(s)	660
TasI	AATT	6 cut(s)	167, 403, 1360, 1391, 1506, 1545
TatI	WGTACW	2 cut(s)	537, 1676
TauI	GCSGC	2 cut(s)	179, 357
TfiI	GAWTC	2 cut(s)	853, 933
Tru1I	TTAA	2 cut(s)	453, 1374
Tru9I	TTAA	2 cut(s)	453, 1374
TscAI	CASTG	3 cut(s)	836, 1498, 1534
TseFI	GTSAC	4 cut(s)	40, 657, 709, 949
TseI	GCWGC	2 cut(s)	1148, 1532
Tsp45I	GTSAC	4 cut(s)	40, 657, 709, 949
TspDTI	ATGAA	6 cut(s)	510, 1040, 1086, 1277, 1404, 1473
TspGWI	ACGGA	4 cut(s)	960, 1021, 1065, 1412
TspRI	CASTG	3 cut(s)	836, 1498, 1534
XapI	RAATTY	1 cut(s)	403
XceI	RCATGY	2 cut(s)	779, 1677
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1192
XhoI	CTCGAG	1 cut(s)	662
XmiI	GTMKAC	1 cut(s)	387
XmnI	GAANNNNTTC	1 cut(s)	575
XspI	CTAG	4 cut(s)	30, 128, 741, 1520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.