DYW family of nucleic acid deaminases
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G14330 |
| fragaria_vesca | FvH4_1g28620 |
| malus_domestica | MD17G1262400.v1.1 |
| prunus_persica | Prupe.3G163800_v2.0.a1 |
| pyrus_communis | pycom17g26230 |
| rosa_chinensis | RchiOBHm_Chr3g0492571 |
| rosa_laevigata | RLG00000022759 |
| rosa_multiflora | Rmu_sc0000831.1_g000061 Rmu_sc0008694.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00325000 Rroxscaffold_4G00325010 |
| rosa_rugosa | Rorug03G0254500 |
| rosa_samantha | Rh3BG340900 Rh3BG341000 Rh3BG341100 Rh3CG338400 Rh3DG340200 Rh3DG340300 Rh5BG302200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 32 |
| AccI | GTMKAC | 1 cut(s) | 253 |
| AciI | CCGC | 1 cut(s) | 265 |
| AclI | AACGTT | 1 cut(s) | 24 |
| AcoI | YGGCCR | 3 cut(s) | 157, 342, 348 |
| AcsI | RAATTY | 1 cut(s) | 433 |
| AfaI | GTAC | 1 cut(s) | 475 |
| AgsI | TTSAA | 4 cut(s) | 20, 47, 232, 363 |
| AhlI | ACTAGT | 1 cut(s) | 418 |
| AluBI | AGCT | 5 cut(s) | 6, 16, 154, 241, 480 |
| AluI | AGCT | 5 cut(s) | 6, 16, 154, 241, 480 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Ama87I | CYCGRG | 1 cut(s) | 32 |
| AoxI | GGCC | 3 cut(s) | 157, 342, 348 |
| ApoI | RAATTY | 1 cut(s) | 433 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 1 cut(s) | 20 |
| AvaI | CYCGRG | 1 cut(s) | 32 |
| BalI | TGGCCA | 3 cut(s) | 159, 344, 350 |
| BanII | GRGCYC | 2 cut(s) | 8, 306 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BccI | CCATC | 2 cut(s) | 233, 293 |
| BcuI | ACTAGT | 1 cut(s) | 418 |
| BfaI | CTAG | 2 cut(s) | 74, 419 |
| BmeT110I | CYCGRG | 1 cut(s) | 32 |
| BmiI | GGNNCC | 1 cut(s) | 305 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 375, 407 |
| BsaJI | CCNNGG | 1 cut(s) | 345 |
| Bse3DI | GCAATG | 1 cut(s) | 351 |
| BseDI | CCNNGG | 1 cut(s) | 345 |
| BseMI | GCAATG | 1 cut(s) | 351 |
| BseRI | GAGGAG | 4 cut(s) | 92, 95, 98, 101 |
| BshFI | GGCC | 3 cut(s) | 159, 344, 350 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 1 cut(s) | 32 |
| BsmI | GAATGC | 1 cut(s) | 440 |
| BsnI | GGCC | 3 cut(s) | 159, 344, 350 |
| BsoBI | CYCGRG | 1 cut(s) | 32 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 306 |
| Bsp19I | CCATGG | 1 cut(s) | 345 |
| BspACI | CCGC | 1 cut(s) | 265 |
| BspANI | GGCC | 3 cut(s) | 159, 344, 350 |
| BspLI | GGNNCC | 1 cut(s) | 305 |
| BsrDI | GCAATG | 1 cut(s) | 351 |
| BssECI | CCNNGG | 1 cut(s) | 345 |
| BssT1I | CCWWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 1 cut(s) | 177 |
| BstDEI | CTNAG | 1 cut(s) | 376 |
| BstDSI | CCRYGG | 1 cut(s) | 345 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 458 |
| BstNSI | RCATGY | 2 cut(s) | 325, 465 |
| BsuRI | GGCC | 3 cut(s) | 159, 344, 350 |
| BtgI | CCRYGG | 1 cut(s) | 345 |
| Csp6I | GTAC | 1 cut(s) | 474 |
| CviAII | CATG | 3 cut(s) | 322, 346, 462 |
| CviQI | GTAC | 1 cut(s) | 474 |
| DdeI | CTNAG | 1 cut(s) | 376 |
| EaeI | YGGCCR | 3 cut(s) | 157, 342, 348 |
| Ecl136II | GAGCTC | 1 cut(s) | 6 |
| Eco130I | CCWWGG | 1 cut(s) | 345 |
| Eco24I | GRGCYC | 2 cut(s) | 8, 306 |
| Eco53kI | GAGCTC | 1 cut(s) | 6 |
| Eco88I | CYCGRG | 1 cut(s) | 32 |
| EcoICRI | GAGCTC | 1 cut(s) | 6 |
| EcoT14I | CCWWGG | 1 cut(s) | 345 |
| EcoT38I | GRGCYC | 2 cut(s) | 8, 306 |
| ErhI | CCWWGG | 1 cut(s) | 345 |
| FaeI | CATG | 3 cut(s) | 325, 349, 465 |
| FaiI | YATR | 5 cut(s) | 323, 347, 397, 449, 463 |
| FatI | CATG | 3 cut(s) | 321, 345, 461 |
| FblI | GTMKAC | 1 cut(s) | 253 |
| FriOI | GRGCYC | 2 cut(s) | 8, 306 |
| FspBI | CTAG | 2 cut(s) | 74, 419 |
| HaeIII | GGCC | 3 cut(s) | 159, 344, 350 |
| Hin1II | CATG | 3 cut(s) | 325, 349, 465 |
| HincII | GTYRAC | 1 cut(s) | 217 |
| HindII | GTYRAC | 1 cut(s) | 217 |
| HindIII | AAGCTT | 1 cut(s) | 152 |
| HinfI | GANTC | 1 cut(s) | 138 |
| HphI | GGTGA | 1 cut(s) | 20 |
| Hpy166II | GTNNAC | 4 cut(s) | 28, 202, 217, 254 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 129 |
| Hpy188III | TCNNGA | 3 cut(s) | 142, 229, 363 |
| Hpy8I | GTNNAC | 4 cut(s) | 28, 202, 217, 254 |
| Hpy99I | CGWCG | 2 cut(s) | 14, 299 |
| HpyCH4III | ACNGT | 1 cut(s) | 177 |
| HpyCH4IV | ACGT | 2 cut(s) | 24, 198 |
| HpyCH4V | TGCA | 3 cut(s) | 270, 325, 440 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 458 |
| HpyF3I | CTNAG | 1 cut(s) | 376 |
| HpySE526I | ACGT | 2 cut(s) | 24, 198 |
| Hsp92II | CATG | 3 cut(s) | 325, 349, 465 |
| LmnI | GCTCC | 2 cut(s) | 11, 309 |
| LpnPI | CCDG | 2 cut(s) | 313, 409 |
| MaeI | CTAG | 2 cut(s) | 74, 419 |
| MaeII | ACGT | 2 cut(s) | 24, 198 |
| MboII | GAAGA | 9 cut(s) | 103, 112, 115, 118, 121, 124, 127, 159, 173 |
| MhlI | GDGCHC | 2 cut(s) | 8, 306 |
| MlsI | TGGCCA | 3 cut(s) | 159, 344, 350 |
| MluCI | AATT | 3 cut(s) | 68, 131, 433 |
| MluNI | TGGCCA | 3 cut(s) | 159, 344, 350 |
| MmeI | TCCRAC | 1 cut(s) | 33 |
| MnlI | CCTC | 6 cut(s) | 28, 41, 70, 73, 76, 79 |
| Mox20I | TGGCCA | 3 cut(s) | 159, 344, 350 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MscI | TGGCCA | 3 cut(s) | 159, 344, 350 |
| MseI | TTAA | 1 cut(s) | 455 |
| Msp20I | TGGCCA | 3 cut(s) | 159, 344, 350 |
| Mva1269I | GAATGC | 1 cut(s) | 440 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 458 |
| NcoI | CCATGG | 1 cut(s) | 345 |
| NlaIII | CATG | 3 cut(s) | 325, 349, 465 |
| NlaIV | GGNNCC | 1 cut(s) | 305 |
| NspI | RCATGY | 2 cut(s) | 325, 465 |
| PaeR7I | CTCGAG | 1 cut(s) | 32 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 30 |
| PctI | GAATGC | 1 cut(s) | 440 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PfeI | GAWTC | 1 cut(s) | 138 |
| Psp124BI | GAGCTC | 1 cut(s) | 8 |
| Psp1406I | AACGTT | 1 cut(s) | 24 |
| PspN4I | GGNNCC | 1 cut(s) | 305 |
| PspXI | VCTCGAGB | 1 cut(s) | 32 |
| RsaI | GTAC | 1 cut(s) | 475 |
| RsaNI | GTAC | 1 cut(s) | 474 |
| SacI | GAGCTC | 1 cut(s) | 8 |
| SaqAI | TTAA | 1 cut(s) | 455 |
| SduI | GDGCHC | 2 cut(s) | 8, 306 |
| Sfr274I | CTCGAG | 1 cut(s) | 32 |
| SlaI | CTCGAG | 1 cut(s) | 32 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| SpeI | ACTAGT | 1 cut(s) | 418 |
| Sse9I | AATT | 3 cut(s) | 68, 131, 433 |
| SsiI | CCGC | 1 cut(s) | 265 |
| SspMI | CTAG | 2 cut(s) | 74, 419 |
| SstI | GAGCTC | 1 cut(s) | 8 |
| StyI | CCWWGG | 1 cut(s) | 345 |
| TaaI | ACNGT | 1 cut(s) | 177 |
| TaiI | ACGT | 2 cut(s) | 27, 201 |
| TaqI | TCGA | 5 cut(s) | 33, 54, 141, 172, 297 |
| TasI | AATT | 3 cut(s) | 68, 131, 433 |
| TfiI | GAWTC | 1 cut(s) | 138 |
| Tru1I | TTAA | 1 cut(s) | 455 |
| Tru9I | TTAA | 1 cut(s) | 455 |
| XapI | RAATTY | 1 cut(s) | 433 |
| XceI | RCATGY | 2 cut(s) | 325, 465 |
| XhoI | CTCGAG | 1 cut(s) | 32 |
| XmiI | GTMKAC | 1 cut(s) | 253 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |
| XspI | CTAG | 2 cut(s) | 74, 419 |