Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0011933

Physical Location & Seq

Genomic Coordinates Reverse (-)

37831165 .. 37834680

Gene Structure 3516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG338400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGATTGGCGCCATTTCTGTGTCAACTAGCACAACTGTGACTTGTTCAGTCTCCGGCATTTCTCAAAAACCCAGCAAGCCTCTAACTCCCTCAACTCTCAAATGGCTTGCAAAATCCGGCAAACTAGAAGAGGCCATTCGCCTGATCGAAGCCTCACCCTCCAAATTGACGGCCACTGAGTCCGACATCGAGGCCTACTCCCTCCTCCTCCACACCTGTATCTCCCAAAAATCCTTAGAGCATGGCCAAAGGCTTTACCTACAGTTTCTTGTCTCAGAAGACAAAGTGAACCACAGCCTCGTCAACAATCCCACCTTGAAAACCAAGCTCATTACTCTCTACTCTGTCTGCGGCCGAGTTGACGACGCCCACTCTGTTTTCGTCGACGGTGAACACGCGCCTGAGGAGTCGGTGTGGGTGGCCATGGCCATTGCGTATTTGAGAAATGGCTACTTGGAGAAAGCGTTGCTCTTATATTGTGAAATGTTGTGCCGGCTAGTCTGGCCGGGGAATTTCGCATTCTCGATGGCGTTGAAGGCCTCTGCAGAGTTGTCTGAGCTTAGAGTCGGGAGAGTAGTCCATGCCCAGATTGTGAAATCCAATGAAAAGCCTGATCAAGTGGTCAATAATGCTCTTCTGAGATTGTACTCAGAGCAGGGGTGCTTTGGGGATGCCTTGAAGGTGTTCGAAACAATGCCTCAACGAAATGTTGTTTCTTGGAACTCATTGATTGCAAGTTTTGTTCGACGAGACCGAGTGTTTGAGTCACTCGAGTGTTTTAGAAGGATGCAAGGAGAGGGGATGGGGTTCACTTGGGTCACCCTCACGACAGTGTTACCAATATGTGCTAGACTGACTGCACTATATAGTGGGAAGGAGATACATGCCCTGATAGTCAAGTCCACCAAGAGACCTGATGTCCCTGTACTGAACTCACTCATGGACATGTATGCAAAATGCGGAGCGATTGATTACTGTAAGAGGGTGTTTGACAATATGCACTGTAAAGATTTGACATCTTGGAATACTGTTCTTACAGGGTATGCGGTGAATGGGTTTATTGAACAAGGCATGATATTGTTTGATCAGATGGTAGAGTCTGGAATCAGACCAGATGGAGTGACCTTTATAGCTCTGTTATCTGGCTGTAGCCATGCGGGGCTTACTGACCAAGGACGGAGATTGTTTGATAAAATGAAGTTGGGTTATGGCATATCCCCAACTGTTGAGCATTATGGTTGTCTTGTAGATCTCTTGGGAAGAGCTGGTAGAATTGAGGAGGCCTTAGATGTAGTGGAAAACATGCCTGTGAAGCCATCTGGAAGCATATGGGGTTCATTACTCAACTCGTGCTGGCTCCAAGGCAAAGTTGCTCTTGCGGAGCGTGCTGCAATGGAGTTGTTTGAGCTTGAACCTAACAATCCTGGGAACTATGTGGTGCTCTCAAATGTTTATGCAAATGCAGGGATGTGGGAGGGCGTCAATAGGGTTCGAGAACTTATGAAGGAGAGGGGACTTGAAAAGGAGGCTGGATGCAGTTGGTTGGGAGTAGGATCCACACGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

522

Amino Acids

57.76

Weight (kDa)

6.8

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	337 - 384	5.9e-10	PPR repeat family
PPR	PF01535	340 - 369	9.8e-06	PPR repeat
PPR_3	PF13812	360 - 420	3.2e-07	Pentatricopeptide repeat domain
E_motif	PF20431	457 - 515	1.6e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011933)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14330
fragaria_vesca	FvH4_1g28620
malus_domestica	MD17G1262400.v1.1
prunus_persica	Prupe.3G163800_v2.0.a1
pyrus_communis	pycom17g26230
rosa_chinensis	RchiOBHm_Chr3g0492571
rosa_laevigata	RLG00000022759
rosa_multiflora	Rmu_sc0000831.1_g000061 Rmu_sc0008694.1_g000001
rosa_roxburghii	Rroxscaffold_4G00325000 Rroxscaffold_4G00325010
rosa_rugosa	Rorug03G0254500
rosa_samantha	Rh3BG340900 Rh3BG341000 Rh3BG341100 Rh3CG338400 Rh3DG340200 Rh3DG340300 Rh5BG302200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	8
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	1 cut(s)	398
AciI	CCGC	5 cut(s)	351, 960, 1046, 1157, 1379
AclWI	GGATC	2 cut(s)	1548, 1561
AcoI	YGGCCR	6 cut(s)	171, 244, 352, 420, 426, 503
AcsI	RAATTY	1 cut(s)	511
AcyI	GRCGYC	3 cut(s)	9, 366, 1479
AfaI	GTAC	2 cut(s)	647, 927
AflIII	ACRYGT	2 cut(s)	945, 1559
AgsI	TTSAA	6 cut(s)	319, 535, 679, 1064, 1412, 1520
AhdI	GACNNNNNGTC	1 cut(s)	917
AjnI	CCWGG	1 cut(s)	1423
AleI	CACNNNNGTG	3 cut(s)	35, 772, 830
AluBI	AGCT	5 cut(s)	328, 559, 1133, 1265, 1408
AluI	AGCT	5 cut(s)	328, 559, 1133, 1265, 1408
Alw21I	GWGCWC	1 cut(s)	1443
Alw26I	GTCTC	4 cut(s)	55, 277, 744, 904
AlwI	GGATC	2 cut(s)	1548, 1561
Ama87I	CYCGRG	1 cut(s)	770
ApeKI	GCWGC	1 cut(s)	1388
ApoI	RAATTY	1 cut(s)	511
ArsI	GACNNNNNNTTYG	2 cut(s)	743, 775
Asp700I	GAANNNNTTC	1 cut(s)	683
AspLEI	GCGC	2 cut(s)	11, 400
AsuC2I	CCSGG	1 cut(s)	507
AsuHPI	GGTGA	4 cut(s)	147, 401, 811, 1060
AsuII	TTCGAA	1 cut(s)	687
AvaI	CYCGRG	1 cut(s)	770
AxyI	CCTNAGG	1 cut(s)	402
BaeI	ACNNNNGTAYC	2 cut(s)	202, 235
BalI	TGGCCA	3 cut(s)	246, 422, 428
BamHI	GGATCC	1 cut(s)	1553
BanI	GGYRCC	1 cut(s)	8
BauI	CACGAG	1 cut(s)	1348
BbsI	GAAGAC	1 cut(s)	285
Bbv12I	GWGCWC	1 cut(s)	1443
BbvI	GCAGC	1 cut(s)	1375
BccI	CCATC	5 cut(s)	520, 796, 1084, 1109, 1324
BceAI	ACGGC	1 cut(s)	186
BciT130I	CCWGG	1 cut(s)	1425
BclI	TGATCA	2 cut(s)	613, 1084
BcnI	CCSGG	1 cut(s)	507
BcoDI	GTCTC	4 cut(s)	55, 277, 744, 904
BfaI	CTAG	4 cut(s)	27, 125, 497, 849
BfmI	CTRYAG	3 cut(s)	260, 543, 1147
BfoI	RGCGCY	1 cut(s)	12
BglII	AGATCT	1 cut(s)	1249
BisI	GCNGC	2 cut(s)	352, 1389
BlsI	GCNGC	2 cut(s)	353, 1390
Bme1390I	CCNGG	2 cut(s)	507, 1425
BmeRI	GACNNNNNGTC	1 cut(s)	917
BmeT110I	CYCGRG	1 cut(s)	770
BmiI	GGNNCC	3 cut(s)	10, 1358, 1555
BmrFI	CCNGG	2 cut(s)	507, 1425
BmsI	GCATC	3 cut(s)	661, 777, 1523
BpiI	GAAGAC	1 cut(s)	285
BplI	GAGNNNNNCTC	2 cut(s)	182, 214
Bpu14I	TTCGAA	1 cut(s)	687
BpuMI	CCSGG	1 cut(s)	507
BsaHI	GRCGYC	3 cut(s)	9, 366, 1479
BsaI	GGTCTC	2 cut(s)	744, 904
BsaJI	CCNNGG	5 cut(s)	423, 506, 1171, 1360, 1424
BsaXI	ACNNNNNCTCC	4 cut(s)	398, 428, 449, 479
Bse118I	RCCGGY	1 cut(s)	492
Bse21I	CCTNAGG	1 cut(s)	402
Bse3DI	GCAATG	2 cut(s)	429, 1398
BseBI	CCWGG	1 cut(s)	1425
BseDI	CCNNGG	5 cut(s)	423, 506, 1171, 1360, 1424
BseGI	GGATG	5 cut(s)	676, 792, 807, 1473, 1538
BseMI	GCAATG	2 cut(s)	429, 1398
BseMII	CTCAG	6 cut(s)	168, 288, 393, 546, 629, 663
BseRI	GAGGAG	4 cut(s)	194, 197, 419, 1292
BseX3I	CGGCCG	1 cut(s)	352
BseXI	GCAGC	1 cut(s)	1375
BseYI	CCCAGC	1 cut(s)	71
BsgI	GTGCAG	1 cut(s)	843
Bsh1236I	CGCG	1 cut(s)	398
Bsh1285I	CGRYCG	1 cut(s)	355
BshNI	GGYRCC	1 cut(s)	8
BsiEI	CGRYCG	1 cut(s)	355
BsiHKAI	GWGCWC	1 cut(s)	1443
BsiHKCI	CYCGRG	1 cut(s)	770
BsiSI	CCGG	4 cut(s)	54, 117, 493, 506
BslFI	GGGAC	2 cut(s)	905, 1527
BsmAI	GTCTC	4 cut(s)	55, 277, 744, 904
BsmFI	GGGAC	2 cut(s)	905, 1527
BsmI	GAATGC	1 cut(s)	518
Bso31I	GGTCTC	2 cut(s)	744, 904
BsoBI	CYCGRG	1 cut(s)	770
Bsp119I	TTCGAA	1 cut(s)	687
Bsp1286I	GDGCHC	1 cut(s)	1443
Bsp143I	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
Bsp19I	CCATGG	1 cut(s)	423
BspACI	CCGC	5 cut(s)	351, 960, 1046, 1157, 1379
BspCNI	CTCAG	6 cut(s)	169, 287, 394, 547, 630, 662
BspFNI	CGCG	1 cut(s)	398
BspLI	GGNNCC	3 cut(s)	10, 1358, 1555
BspMAI	CTGCAG	1 cut(s)	547
BspPI	GGATC	2 cut(s)	1548, 1561
BspQI	GCTCTTC	2 cut(s)	639, 1255
BspT104I	TTCGAA	1 cut(s)	687
BspT107I	GGYRCC	1 cut(s)	8
BspTNI	GGTCTC	2 cut(s)	744, 904
BsrDI	GCAATG	2 cut(s)	429, 1398
BsrFI	RCCGGY	1 cut(s)	492
BssAI	RCCGGY	1 cut(s)	492
BssECI	CCNNGG	5 cut(s)	423, 506, 1171, 1360, 1424
BssMI	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
BssNI	GRCGYC	3 cut(s)	9, 366, 1479
BssSI	CACGAG	1 cut(s)	1348
BssT1I	CCWWGG	3 cut(s)	423, 1171, 1360
Bst2BI	CACGAG	1 cut(s)	1348
Bst2UI	CCWGG	1 cut(s)	1425
Bst4CI	ACNGT	8 cut(s)	37, 264, 389, 832, 977, 1004, 1030, 1225
Bst6I	CTCTTC	3 cut(s)	123, 639, 1255
BstACI	GRCGYC	3 cut(s)	9, 366, 1479
BstBI	TTCGAA	1 cut(s)	687
BstC8I	GCNNGC	5 cut(s)	77, 108, 494, 1355, 1386
BstDEI	CTNAG	9 cut(s)	177, 235, 274, 402, 555, 560, 638, 649, 1285
BstDSI	CCRYGG	1 cut(s)	423
BstEII	GGTNACC	1 cut(s)	817
BstF5I	GGATG	5 cut(s)	676, 792, 807, 1473, 1538
BstFNI	CGCG	1 cut(s)	398
BstH2I	RGCGCY	1 cut(s)	12
BstHHI	GCGC	2 cut(s)	11, 400
BstKTI	GATC	5 cut(s)	147, 616, 1087, 1252, 1556
BstMAI	GTCTC	4 cut(s)	55, 277, 744, 904
BstMBI	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
BstMCI	CGRYCG	1 cut(s)	355
BstMWI	GCNNNNNNNGC	4 cut(s)	502, 536, 1312, 1385
BstNI	CCWGG	1 cut(s)	1425
BstNSI	RCATGY	3 cut(s)	887, 949, 1306
BstPI	GGTNACC	1 cut(s)	817
BstSCI	CCNGG	2 cut(s)	505, 1423
BstSFI	CTRYAG	3 cut(s)	260, 543, 1147
BstUI	CGCG	1 cut(s)	398
BstV1I	GCAGC	1 cut(s)	1375
BstV2I	GAAGAC	1 cut(s)	285
BstX2I	RGATCY	2 cut(s)	1249, 1553
BstYI	RGATCY	2 cut(s)	1249, 1553
BstZI	CGGCCG	1 cut(s)	352
Bsu36I	CCTNAGG	1 cut(s)	402
BtgI	CCRYGG	1 cut(s)	423
BtsCI	GGATG	5 cut(s)	676, 792, 807, 1473, 1538
BtsIMutI	CAGTG	3 cut(s)	174, 837, 1000
Cac8I	GCNNGC	5 cut(s)	77, 108, 494, 1355, 1386
CfoI	GCGC	2 cut(s)	11, 400
Cfr10I	RCCGGY	1 cut(s)	492
CseI	GACGC	2 cut(s)	374, 1468
Csp6I	GTAC	2 cut(s)	646, 926
CviAII	CATG	9 cut(s)	242, 424, 581, 884, 940, 946, 1072, 1154, 1303
CviQI	GTAC	2 cut(s)	646, 926
DdeI	CTNAG	9 cut(s)	177, 235, 274, 402, 555, 560, 638, 649, 1285
DinI	GGCGCC	1 cut(s)	10
DpnI	GATC	5 cut(s)	146, 615, 1086, 1251, 1555
DpnII	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
DriI	GACNNNNNGTC	1 cut(s)	917
EaeI	YGGCCR	6 cut(s)	171, 244, 352, 420, 426, 503
EagI	CGGCCG	1 cut(s)	352
Eam1104I	CTCTTC	3 cut(s)	123, 639, 1255
Eam1105I	GACNNNNNGTC	1 cut(s)	917
EarI	CTCTTC	3 cut(s)	123, 639, 1255
EclXI	CGGCCG	1 cut(s)	352
Eco130I	CCWWGG	3 cut(s)	423, 1171, 1360
Eco147I	AGGCCT	3 cut(s)	194, 539, 1283
Eco31I	GGTCTC	2 cut(s)	744, 904
Eco52I	CGGCCG	1 cut(s)	352
Eco81I	CCTNAGG	1 cut(s)	402
Eco88I	CYCGRG	1 cut(s)	770
Eco91I	GGTNACC	1 cut(s)	817
EcoO65I	GGTNACC	1 cut(s)	817
EcoRII	CCWGG	1 cut(s)	1423
EcoT14I	CCWWGG	3 cut(s)	423, 1171, 1360
EgeI	GGCGCC	1 cut(s)	10
EheI	GGCGCC	1 cut(s)	10
ErhI	CCWWGG	3 cut(s)	423, 1171, 1360
FaeI	CATG	9 cut(s)	245, 427, 584, 887, 943, 949, 1075, 1157, 1306
FalI	AAGNNNNNCTT	2 cut(s)	1359, 1391
FaqI	GGGAC	2 cut(s)	905, 1527
FatI	CATG	9 cut(s)	241, 423, 580, 883, 939, 945, 1071, 1153, 1302
FauI	CCCGC	1 cut(s)	1150
FauNDI	CATATG	1 cut(s)	1328
FbaI	TGATCA	2 cut(s)	613, 1084
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	2 cut(s)	352, 1389
FokI	GGATG	5 cut(s)	683, 799, 814, 1480, 1545
Fsp4HI	GCNGC	2 cut(s)	352, 1389
FspBI	CTAG	4 cut(s)	27, 125, 497, 849
GlaI	GCGC	2 cut(s)	10, 399
GluI	GCNGC	2 cut(s)	352, 1389
GsaI	CCCAGC	1 cut(s)	75
HaeII	RGCGCY	1 cut(s)	12
HapII	CCGG	4 cut(s)	54, 117, 493, 506
HgaI	GACGC	2 cut(s)	374, 1468
HhaI	GCGC	2 cut(s)	11, 400
Hin1I	GRCGYC	3 cut(s)	9, 366, 1479
Hin1II	CATG	9 cut(s)	245, 427, 584, 887, 943, 949, 1075, 1157, 1306
Hin6I	GCGC	2 cut(s)	9, 398
HinP1I	GCGC	2 cut(s)	9, 398
HincII	GTYRAC	4 cut(s)	24, 304, 361, 385
HindII	GTYRAC	4 cut(s)	24, 304, 361, 385
HinfI	GANTC	6 cut(s)	179, 407, 564, 764, 1097, 1104
HpaII	CCGG	4 cut(s)	54, 117, 493, 506
HphI	GGTGA	4 cut(s)	147, 401, 811, 1060
Hpy166II	GTNNAC	8 cut(s)	24, 289, 304, 361, 385, 392, 810, 903
Hpy188I	TCNGA	7 cut(s)	184, 277, 556, 639, 652, 1089, 1109
Hpy188III	TCNNGA	6 cut(s)	523, 568, 826, 1101, 1320, 1493
Hpy8I	GTNNAC	8 cut(s)	24, 289, 304, 361, 385, 392, 810, 903
Hpy99I	CGWCG	4 cut(s)	368, 386, 389, 750
HpyAV	CCTTC	5 cut(s)	529, 673, 777, 868, 1498
HpyCH4III	ACNGT	8 cut(s)	37, 264, 389, 832, 977, 1004, 1030, 1225
HpyCH4IV	ACGT	1 cut(s)	1561
HpyF10VI	GCNNNNNNNGC	4 cut(s)	502, 536, 1312, 1385
HpyF3I	CTNAG	9 cut(s)	177, 235, 274, 402, 555, 560, 638, 649, 1285
HpySE526I	ACGT	1 cut(s)	1561
Hsp92I	GRCGYC	3 cut(s)	9, 366, 1479
Hsp92II	CATG	9 cut(s)	245, 427, 584, 887, 943, 949, 1075, 1157, 1306
HspAI	GCGC	2 cut(s)	9, 398
KasI	GGCGCC	1 cut(s)	8
KroI	GCCGGC	1 cut(s)	492
KroNI	GCCGGC	1 cut(s)	494
Ksp22I	TGATCA	2 cut(s)	613, 1084
Kzo9I	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
LguI	GCTCTTC	2 cut(s)	639, 1255
LmnI	GCTCC	3 cut(s)	962, 1362, 1381
Lsp1109I	GCAGC	1 cut(s)	1375
LweI	GCATC	3 cut(s)	661, 777, 1523
MaeI	CTAG	4 cut(s)	27, 125, 497, 849
MaeII	ACGT	1 cut(s)	1561
MaeIII	GTNAC	5 cut(s)	37, 765, 817, 834, 1120
MalI	GATC	5 cut(s)	146, 615, 1086, 1251, 1555
MboI	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
MboII	GAAGA	4 cut(s)	140, 290, 626, 1272
MflI	RGATCY	2 cut(s)	1249, 1553
MhlI	GDGCHC	1 cut(s)	1443
MlsI	TGGCCA	3 cut(s)	246, 422, 428
MluCI	AATT	3 cut(s)	164, 511, 1272
MluNI	TGGCCA	3 cut(s)	246, 422, 428
Mly113I	GGCGCC	1 cut(s)	9
MlyI	GAGTC	5 cut(s)	188, 416, 573, 773, 1106
MmeI	TCCRAC	1 cut(s)	207
Mox20I	TGGCCA	3 cut(s)	246, 422, 428
MroNI	GCCGGC	1 cut(s)	492
MroXI	GAANNNNTTC	1 cut(s)	683
MscI	TGGCCA	3 cut(s)	246, 422, 428
MslI	CAYNNNNRTG	6 cut(s)	17, 35, 772, 830, 944, 1307
Msp20I	TGGCCA	3 cut(s)	246, 422, 428
MspI	CCGG	4 cut(s)	54, 117, 493, 506
MspR9I	CCNGG	2 cut(s)	507, 1425
Mva1269I	GAATGC	1 cut(s)	518
MvaI	CCWGG	1 cut(s)	1425
MvnI	CGCG	1 cut(s)	398
MwoI	GCNNNNNNNGC	4 cut(s)	502, 536, 1312, 1385
NaeI	GCCGGC	1 cut(s)	494
NarI	GGCGCC	1 cut(s)	9
NciI	CCSGG	1 cut(s)	507
NcoI	CCATGG	1 cut(s)	423
NdeI	CATATG	1 cut(s)	1328
NdeII	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
NgoMIV	GCCGGC	1 cut(s)	492
NlaIII	CATG	9 cut(s)	245, 427, 584, 887, 943, 949, 1075, 1157, 1306
NlaIV	GGNNCC	3 cut(s)	10, 1358, 1555
NmeAIII	GCCGAG	1 cut(s)	380
NmuCI	GTSAC	4 cut(s)	37, 765, 817, 1120
NspI	RCATGY	3 cut(s)	887, 949, 1306
NspV	TTCGAA	1 cut(s)	687
OliI	CACNNNNGTG	3 cut(s)	35, 772, 830
PaeR7I	CTCGAG	1 cut(s)	770
PceI	AGGCCT	3 cut(s)	194, 539, 1283
PciI	ACATGT	1 cut(s)	945
PciSI	GCTCTTC	2 cut(s)	639, 1255
PcsI	WCGNNNNNNNCGW	1 cut(s)	751
PctI	GAATGC	1 cut(s)	518
PdiI	GCCGGC	1 cut(s)	494
PdmI	GAANNNNTTC	1 cut(s)	683
PfeI	GAWTC	1 cut(s)	1104
PkrI	GCNGC	2 cut(s)	353, 1390
PleI	GAGTC	5 cut(s)	187, 415, 572, 772, 1105
PluTI	GGCGCC	1 cut(s)	12
PpsI	GAGTC	5 cut(s)	187, 415, 572, 772, 1105
PscI	ACATGT	1 cut(s)	945
Psp6I	CCWGG	1 cut(s)	1423
PspEI	GGTNACC	1 cut(s)	817
PspFI	CCCAGC	1 cut(s)	71
PspGI	CCWGG	1 cut(s)	1423
PspN4I	GGNNCC	3 cut(s)	10, 1358, 1555
PspXI	VCTCGAGB	1 cut(s)	770
PstI	CTGCAG	1 cut(s)	547
PsuI	RGATCY	2 cut(s)	1249, 1553
RsaI	GTAC	2 cut(s)	647, 927
RsaNI	GTAC	2 cut(s)	646, 926
RseI	CAYNNNNRTG	6 cut(s)	17, 35, 772, 830, 944, 1307
SalI	GTCGAC	1 cut(s)	383
SapI	GCTCTTC	2 cut(s)	639, 1255
SatI	GCNGC	2 cut(s)	352, 1389
Sau3AI	GATC	5 cut(s)	144, 613, 1084, 1249, 1553
SchI	GAGTC	5 cut(s)	188, 416, 573, 773, 1106
ScrFI	CCNGG	2 cut(s)	507, 1425
SduI	GDGCHC	1 cut(s)	1443
SfaNI	GCATC	3 cut(s)	661, 777, 1523
SfcI	CTRYAG	3 cut(s)	260, 543, 1147
SfoI	GGCGCC	1 cut(s)	10
Sfr274I	CTCGAG	1 cut(s)	770
SfuI	TTCGAA	1 cut(s)	687
SgrDI	CGTCGACG	1 cut(s)	383
SlaI	CTCGAG	1 cut(s)	770
SmiMI	CAYNNNNRTG	6 cut(s)	17, 35, 772, 830, 944, 1307
SmlI	CTYRAG	1 cut(s)	770
SmoI	CTYRAG	1 cut(s)	770
Sse9I	AATT	3 cut(s)	164, 511, 1272
SseBI	AGGCCT	3 cut(s)	194, 539, 1283
SsiI	CCGC	5 cut(s)	351, 960, 1046, 1157, 1379
SspDI	GGCGCC	1 cut(s)	8
SspMI	CTAG	4 cut(s)	27, 125, 497, 849
StuI	AGGCCT	3 cut(s)	194, 539, 1283
StyD4I	CCNGG	2 cut(s)	505, 1423
StyI	CCWWGG	3 cut(s)	423, 1171, 1360
TaaI	ACNGT	8 cut(s)	37, 264, 389, 832, 977, 1004, 1030, 1225
TaiI	ACGT	1 cut(s)	1564
TaqI	TCGA	8 cut(s)	147, 189, 384, 524, 687, 745, 771, 1492
TaqII	GACCGA	1 cut(s)	768
TasI	AATT	3 cut(s)	164, 511, 1272
TatI	WGTACW	2 cut(s)	645, 925
TauI	GCSGC	1 cut(s)	354
TfiI	GAWTC	1 cut(s)	1104
TscAI	CASTG	3 cut(s)	181, 837, 1007
TseFI	GTSAC	4 cut(s)	37, 765, 817, 1120
TseI	GCWGC	1 cut(s)	1388
Tsp45I	GTSAC	4 cut(s)	37, 765, 817, 1120
TspDTI	ATGAA	4 cut(s)	618, 1211, 1326, 1517
TspGWI	ACGGA	1 cut(s)	1192
TspRI	CASTG	3 cut(s)	181, 837, 1007
XapI	RAATTY	1 cut(s)	511
XceI	RCATGY	3 cut(s)	887, 949, 1306
XhoI	CTCGAG	1 cut(s)	770
XmiI	GTMKAC	1 cut(s)	384
XmnI	GAANNNNTTC	1 cut(s)	683
XspI	CTAG	4 cut(s)	27, 125, 497, 849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.