Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0011828

Physical Location & Seq

Genomic Coordinates Forward (+)

34988443 .. 34991292

Gene Structure 2850 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024348

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1107 bp

ATGGGAAACATGGGCAGTAGTAGAGGCAACTCCTCCCGCCGGAGACACCACCACAACCGCCAGAGCCACCCGTCTCCGCCGCCTCCGGCCCCACCACAGCCCGAAATCTCCGCCAACCGCTACGTCTTCGCGGCCGCGACGCCATACCCGGCTCAGTACCCGAACCAAAACCCGCCGCAATACCCGAACCCGAATCAGGCCCAGTATTTCCAGTACCCCGGTTACTACCCGCCGGCGCCACTGCCGGCGCCGTACGATCACCACCACCGGGTGCCGCATCCGCAGATGGACCCGGCCCAGGCGAATTGGGCCGGCGGGAGGTACCGGTGCGGGCCGGTAATGCAGGCTCCGACGCCGTACGTGGAGCACCAGAAGGCGGTGACGATAAGGAACGATGTGAATCTGAAGAAGGAGTCTTTGAGGGTTGAACCGGATGAGGAAAACCCCGGGAGCTTTCTGTTGTCTTTCACTTTTGACGCCACAGTTGCTGGGAGCATCACCATCATCTTCTTTGCAAAGGAAGGCGAGGACTGTAACCTGACACCAACGAAGTTTAACCTCCTCCCACCTGTGACAGTACACTTTCAACAAGGCCTGGGCCAGAAGTTCAAACAACCCCCTGGAACTGGAATTAACTTCTCAATGTTTGACGAGACAGAGTTACTGAAAGTAGCTGGCTTGGATATCTATCCTCTAGCAGTGAAGGCAGAGGCATCCCCACCTGAGCATGATGGATCAGAGGGAAACTCTGTATCTGTAGCAACGAACTCCCAGATAACTCAGGCTGTATTTGAGAGGGAGAAAGGTGAATTCCAGGTAAGGGTTGTCAAGCAGATTCTTTGGGTGAGTGGGATGAGGTATGAACTACAGGAGATATATGGAATTGGTAATTCAGTCGAGGATGACTTGGACGGGAACGATCCAGGAAAAGAATGCGTCATTTGCCTGTCTGAACCACGGGACACAACTGTTCTTCCATGTCGGCACATGTGTATGTGCAGTGGGTGTGCCAAGGTTTTGAGATACCAGACAAATCGATGTCCAATTTGCCGACAACCAGTTGAGAGGCTTTTGGAGATAAAAGTCAACAATGGTCCTGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005829 GO:0005886 GO:0006464 GO:0006513 GO:0006807 GO:0006810 GO:0007034 GO:0007041 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008277 GO:0008333 GO:0008589 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016192 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0032446 GO:0032870 GO:0033993 GO:0036211 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043949 GO:0043951 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045744 GO:0045879 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055081 GO:0065007 GO:0065008 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080144 GO:0097305 GO:0097306 GO:0097708 GO:0140096 GO:1901527 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

369

Amino Acids

41.03

Weight (kDa)

6.19

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNF157-like_N	PF26192	133 - 289	1.2e-69	RNF157-like N-terminal domain
zf-C3HC4_3	PF13920	310 - 356	1.6e-16	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	311 - 351	4.2e-07	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09770 AT3G09770
fragaria_vesca	FvH4_6g15750
malus_domestica	MD04G1099100.v1.1 MD12G1119700.v1.1
prunus_persica	Prupe.6G237500_v2.0.a1 Prupe.6G237500_v2.0.a1
pyrus_communis	pycom04g09400
rosa_chinensis	RchiOBHm_Chr3g0469461
rosa_laevigata	RLG00000024348
rosa_multiflora	Rmu_sc0005274.1_g000003 Rmu_sc0008852.1_g000003
rosa_roxburghii	Rroxscaffold_6G00411870
rosa_rugosa	Rorug03G0101900
rosa_samantha	Rh3AG150900 Rh3BG174600 Rh3CG165600 Rh3DG200800
rosa_wichuraiana	Rw3G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	321
AccB1I	GGYRCC	4 cut(s)	235, 247, 271, 321
AccII	CGCG	2 cut(s)	131, 137
AclWI	GGATC	2 cut(s)	742, 914
AcoI	YGGCCR	1 cut(s)	132
AcsI	RAATTY	1 cut(s)	809
AcuI	CTGAAG	1 cut(s)	425
AcyI	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
AdeI	CACNNNGTG	1 cut(s)	271
AfaI	GTAC	6 cut(s)	158, 215, 254, 323, 359, 579
AfiI	CCNNNNNNNGG	8 cut(s)	39, 196, 268, 298, 318, 376, 626, 820
AflIII	ACRYGT	1 cut(s)	987
AgeI	ACCGGT	1 cut(s)	324
AgsI	TTSAA	3 cut(s)	428, 587, 610
AjnI	CCWGG	5 cut(s)	297, 594, 619, 813, 922
AluBI	AGCT	2 cut(s)	453, 674
AluI	AGCT	2 cut(s)	453, 674
Alw21I	GWGCWC	1 cut(s)	369
Alw26I	GTCTC	3 cut(s)	37, 78, 647
AlwI	GGATC	2 cut(s)	742, 914
AlwNI	CAGNNNCTG	1 cut(s)	488
Ama87I	CYCGRG	1 cut(s)	446
AoxI	GGCC	8 cut(s)	87, 132, 198, 294, 309, 332, 592, 598
ApoI	RAATTY	1 cut(s)	809
AsiGI	ACCGGT	1 cut(s)	324
Asp718I	GGTACC	1 cut(s)	321
AspLEI	GCGC	2 cut(s)	238, 250
AspS9I	GGNCC	8 cut(s)	88, 199, 289, 295, 309, 332, 598, 1094
AsuC2I	CCSGG	6 cut(s)	149, 219, 269, 293, 447, 448
AsuHPI	GGTGA	5 cut(s)	251, 391, 490, 818, 856
AvaI	CYCGRG	1 cut(s)	446
AvaII	GGWCC	2 cut(s)	289, 1094
AxyI	CCTNAGG	1 cut(s)	1098
BanI	GGYRCC	4 cut(s)	235, 247, 271, 321
BbsI	GAAGAC	1 cut(s)	118
Bbv12I	GWGCWC	1 cut(s)	369
BccI	CCATC	3 cut(s)	280, 509, 725
BceAI	ACGGC	2 cut(s)	235, 340
BciT130I	CCWGG	5 cut(s)	299, 596, 621, 815, 924
BcnI	CCSGG	6 cut(s)	149, 219, 269, 293, 447, 448
BcoDI	GTCTC	3 cut(s)	37, 78, 647
BfaI	CTAG	1 cut(s)	695
BfmI	CTRYAG	2 cut(s)	756, 866
BfoI	RGCGCY	2 cut(s)	239, 251
BisI	GCNGC	5 cut(s)	80, 132, 135, 176, 275
BlsI	GCNGC	5 cut(s)	81, 133, 136, 177, 276
Bme18I	GGWCC	2 cut(s)	289, 1094
BmeT110I	CYCGRG	1 cut(s)	446
BmgT120I	GGNCC	8 cut(s)	88, 199, 289, 295, 309, 332, 598, 1094
BmiI	GGNNCC	7 cut(s)	90, 237, 249, 273, 291, 323, 348
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	3 cut(s)	286, 504, 722
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	1 cut(s)	118
BplI	GAGNNNNNCTC	2 cut(s)	731, 763
Bpu10I	CCTNAGC	1 cut(s)	723
BpuMI	CCSGG	6 cut(s)	149, 219, 269, 293, 447, 448
Bsa29I	ATCGAT	1 cut(s)	1036
BsaAI	YACGTR	1 cut(s)	361
BsaBI	GATNNNNATC	2 cut(s)	399, 687
BsaHI	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
BsaJI	CCNNGG	8 cut(s)	217, 297, 445, 446, 595, 619, 956, 1011
BsaWI	WCCGGW	2 cut(s)	324, 430
Bsc4I	CCNNNNNNNGG	8 cut(s)	39, 196, 268, 298, 318, 376, 626, 820
Bse118I	RCCGGY	5 cut(s)	232, 244, 311, 324, 334
Bse1I	ACTGG	4 cut(s)	202, 211, 631, 1058
Bse21I	CCTNAGG	1 cut(s)	1098
Bse8I	GATNNNNATC	2 cut(s)	399, 687
BseBI	CCWGG	5 cut(s)	299, 596, 621, 815, 924
BseCI	ATCGAT	1 cut(s)	1036
BseDI	CCNNGG	8 cut(s)	217, 297, 445, 446, 595, 619, 956, 1011
BseGI	GGATG	5 cut(s)	277, 439, 713, 858, 907
BseJI	GATNNNNATC	2 cut(s)	399, 687
BseLI	CCNNNNNNNGG	8 cut(s)	39, 196, 268, 298, 318, 376, 626, 820
BseMII	CTCAG	4 cut(s)	167, 714, 794, 1089
BseNI	ACTGG	4 cut(s)	202, 211, 631, 1058
BseRI	GAGGAG	2 cut(s)	22, 551
BseX3I	CGGCCG	1 cut(s)	132
BseYI	CCCAGC	1 cut(s)	488
BsgI	GTGCAG	1 cut(s)	1018
Bsh1236I	CGCG	2 cut(s)	131, 137
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	8 cut(s)	89, 134, 200, 296, 311, 334, 594, 600
BshNI	GGYRCC	4 cut(s)	235, 247, 271, 321
BshTI	ACCGGT	1 cut(s)	324
BshVI	ATCGAT	1 cut(s)	1036
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	369
BsiHKCI	CYCGRG	1 cut(s)	446
BsiWI	CGTACG	2 cut(s)	252, 357
BslFI	GGGAC	1 cut(s)	974
BslI	CCNNNNNNNGG	8 cut(s)	39, 196, 268, 298, 318, 376, 626, 820
BsmAI	GTCTC	3 cut(s)	37, 78, 647
BsmBI	CGTCTC	1 cut(s)	78
BsmFI	GGGAC	1 cut(s)	974
BsmI	GAATGC	1 cut(s)	938
BsnI	GGCC	8 cut(s)	89, 134, 200, 296, 311, 334, 594, 600
BsoBI	CYCGRG	1 cut(s)	446
Bsp1286I	GDGCHC	1 cut(s)	369
Bsp143I	GATC	3 cut(s)	256, 734, 919
BspANI	GGCC	8 cut(s)	89, 134, 200, 296, 311, 334, 594, 600
BspCNI	CTCAG	4 cut(s)	166, 715, 793, 1090
BspDI	ATCGAT	1 cut(s)	1036
BspFNI	CGCG	2 cut(s)	131, 137
BspLI	GGNNCC	7 cut(s)	90, 237, 249, 273, 291, 323, 348
BspPI	GGATC	2 cut(s)	742, 914
BspT107I	GGYRCC	4 cut(s)	235, 247, 271, 321
BsrFI	RCCGGY	5 cut(s)	232, 244, 311, 324, 334
BsrI	ACTGG	4 cut(s)	202, 211, 631, 1058
BssAI	RCCGGY	5 cut(s)	232, 244, 311, 324, 334
BssECI	CCNNGG	8 cut(s)	217, 297, 445, 446, 595, 619, 956, 1011
BssMI	GATC	3 cut(s)	256, 734, 919
BssNI	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
BssT1I	CCWWGG	1 cut(s)	1011
Bst2UI	CCWGG	5 cut(s)	299, 596, 621, 815, 924
Bst4CI	ACNGT	4 cut(s)	484, 533, 577, 970
BstACI	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
BstBAI	YACGTR	1 cut(s)	361
BstC8I	GCNNGC	6 cut(s)	234, 246, 313, 332, 345, 676
BstDEI	CTNAG	4 cut(s)	153, 723, 780, 1098
BstDSI	CCRYGG	1 cut(s)	956
BstF5I	GGATG	5 cut(s)	277, 439, 713, 858, 907
BstFNI	CGCG	2 cut(s)	131, 137
BstH2I	RGCGCY	2 cut(s)	239, 251
BstHHI	GCGC	2 cut(s)	238, 250
BstKTI	GATC	3 cut(s)	259, 737, 922
BstMAI	GTCTC	3 cut(s)	37, 78, 647
BstMBI	GATC	3 cut(s)	256, 734, 919
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	6 cut(s)	280, 308, 340, 485, 704, 942
BstNI	CCWGG	5 cut(s)	299, 596, 621, 815, 924
BstNSI	RCATGY	1 cut(s)	991
BstSFI	CTRYAG	2 cut(s)	756, 866
BstUI	CGCG	2 cut(s)	131, 137
BstV2I	GAAGAC	1 cut(s)	118
BstZI	CGGCCG	1 cut(s)	132
Bsu15I	ATCGAT	1 cut(s)	1036
Bsu36I	CCTNAGG	1 cut(s)	1098
BsuRI	GGCC	8 cut(s)	89, 134, 200, 296, 311, 334, 594, 600
BsuTUI	ATCGAT	1 cut(s)	1036
BtgI	CCRYGG	1 cut(s)	956
BtsCI	GGATG	5 cut(s)	277, 439, 713, 858, 907
BtsI	GCAGTG	3 cut(s)	239, 705, 1006
BtsIMutI	CAGTG	3 cut(s)	239, 705, 1006
Cac8I	GCNNGC	6 cut(s)	234, 246, 313, 332, 345, 676
CaiI	CAGNNNCTG	1 cut(s)	488
CciNI	GCGGCCGC	1 cut(s)	132
CfoI	GCGC	2 cut(s)	238, 250
Cfr10I	RCCGGY	5 cut(s)	232, 244, 311, 324, 334
Cfr13I	GGNCC	8 cut(s)	88, 199, 289, 295, 309, 332, 598, 1094
Cfr9I	CCCGGG	1 cut(s)	446
ClaI	ATCGAT	1 cut(s)	1036
CseI	GACGC	4 cut(s)	148, 361, 485, 925
Csp6I	GTAC	6 cut(s)	157, 214, 253, 322, 358, 578
CspAI	ACCGGT	1 cut(s)	324
CviAII	CATG	4 cut(s)	10, 728, 978, 988
CviQI	GTAC	6 cut(s)	157, 214, 253, 322, 358, 578
DdeI	CTNAG	4 cut(s)	153, 723, 780, 1098
DinI	GGCGCC	2 cut(s)	237, 249
DpnI	GATC	3 cut(s)	258, 736, 921
DpnII	GATC	3 cut(s)	256, 734, 919
DraIII	CACNNNGTG	1 cut(s)	271
EaeI	YGGCCR	1 cut(s)	132
EagI	CGGCCG	1 cut(s)	132
EciI	GGCGGA	2 cut(s)	66, 100
EclXI	CGGCCG	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	1011
Eco147I	AGGCCT	1 cut(s)	594
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	2 cut(s)	289, 1094
Eco52I	CGGCCG	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	425
Eco81I	CCTNAGG	1 cut(s)	1098
Eco88I	CYCGRG	1 cut(s)	446
EcoRI	GAATTC	1 cut(s)	809
EcoRII	CCWGG	5 cut(s)	297, 594, 619, 813, 922
EcoRV	GATATC	1 cut(s)	685
EcoT14I	CCWWGG	1 cut(s)	1011
EgeI	GGCGCC	2 cut(s)	237, 249
EheI	GGCGCC	2 cut(s)	237, 249
ErhI	CCWWGG	1 cut(s)	1011
Esp3I	CGTCTC	1 cut(s)	78
FaeI	CATG	4 cut(s)	13, 731, 981, 991
FaiI	YATR	9 cut(s)	11, 145, 729, 861, 877, 879, 979, 989, 995
FaqI	GGGAC	1 cut(s)	974
FatI	CATG	4 cut(s)	9, 727, 977, 987
FauI	CCCGC	5 cut(s)	44, 180, 237, 308, 323
Fnu4HI	GCNGC	5 cut(s)	80, 132, 135, 176, 275
FokI	GGATG	5 cut(s)	264, 446, 700, 865, 914
Fsp4HI	GCNGC	5 cut(s)	80, 132, 135, 176, 275
FspBI	CTAG	1 cut(s)	695
GlaI	GCGC	2 cut(s)	237, 249
GluI	GCNGC	5 cut(s)	80, 132, 135, 176, 275
GsaI	CCCAGC	1 cut(s)	492
HaeII	RGCGCY	2 cut(s)	239, 251
HaeIII	GGCC	8 cut(s)	89, 134, 200, 296, 311, 334, 594, 600
HgaI	GACGC	4 cut(s)	148, 361, 485, 925
HhaI	GCGC	2 cut(s)	238, 250
Hin1I	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
Hin1II	CATG	4 cut(s)	13, 731, 981, 991
Hin6I	GCGC	2 cut(s)	236, 248
HinP1I	GCGC	2 cut(s)	236, 248
HincII	GTYRAC	1 cut(s)	1087
HindII	GTYRAC	1 cut(s)	1087
HinfI	GANTC	4 cut(s)	193, 400, 413, 835
HphI	GGTGA	5 cut(s)	251, 391, 490, 818, 856
Hpy166II	GTNNAC	2 cut(s)	580, 1087
Hpy188I	TCNGA	4 cut(s)	351, 405, 739, 952
Hpy188III	TCNNGA	1 cut(s)	1097
Hpy8I	GTNNAC	2 cut(s)	580, 1087
Hpy99I	CGWCG	2 cut(s)	142, 355
HpyAV	CCTTC	4 cut(s)	367, 403, 515, 697
HpyCH4III	ACNGT	4 cut(s)	484, 533, 577, 970
HpyCH4IV	ACGT	2 cut(s)	123, 360
HpyCH4V	TGCA	3 cut(s)	343, 515, 999
HpyF10VI	GCNNNNNNNGC	6 cut(s)	280, 308, 340, 485, 704, 942
HpyF3I	CTNAG	4 cut(s)	153, 723, 780, 1098
HpySE526I	ACGT	2 cut(s)	123, 360
Hsp92I	GRCGYC	5 cut(s)	140, 236, 248, 353, 477
Hsp92II	CATG	4 cut(s)	13, 731, 981, 991
HspAI	GCGC	2 cut(s)	236, 248
KasI	GGCGCC	2 cut(s)	235, 247
KpnI	GGTACC	1 cut(s)	325
KroI	GCCGGC	3 cut(s)	232, 244, 311
KroNI	GCCGGC	3 cut(s)	234, 246, 313
Kzo9I	GATC	3 cut(s)	256, 734, 919
LmnI	GCTCC	4 cut(s)	352, 364, 450, 492
LweI	GCATC	3 cut(s)	286, 504, 722
MaeI	CTAG	1 cut(s)	695
MaeII	ACGT	2 cut(s)	123, 360
MaeIII	GTNAC	5 cut(s)	221, 379, 533, 571, 660
MalI	GATC	3 cut(s)	258, 736, 921
MboI	GATC	3 cut(s)	256, 734, 919
MboII	GAAGA	4 cut(s)	118, 418, 499, 965
MhlI	GDGCHC	1 cut(s)	369
MluCI	AATT	6 cut(s)	304, 630, 809, 882, 889, 1044
Mly113I	GGCGCC	2 cut(s)	236, 248
MlyI	GAGTC	1 cut(s)	422
MmeI	TCCRAC	1 cut(s)	374
MreI	CGCCGGCG	1 cut(s)	232
MroNI	GCCGGC	3 cut(s)	232, 244, 311
MseI	TTAA	2 cut(s)	555, 633
MslI	CAYNNNNRTG	1 cut(s)	992
Mva1269I	GAATGC	1 cut(s)	938
MvaI	CCWGG	5 cut(s)	299, 596, 621, 815, 924
MvnI	CGCG	2 cut(s)	131, 137
MwoI	GCNNNNNNNGC	6 cut(s)	280, 308, 340, 485, 704, 942
NaeI	GCCGGC	3 cut(s)	234, 246, 313
NarI	GGCGCC	2 cut(s)	236, 248
NciI	CCSGG	6 cut(s)	149, 219, 269, 293, 447, 448
NdeII	GATC	3 cut(s)	256, 734, 919
NgoMIV	GCCGGC	3 cut(s)	232, 244, 311
NlaIII	CATG	4 cut(s)	13, 731, 981, 991
NlaIV	GGNNCC	7 cut(s)	90, 237, 249, 273, 291, 323, 348
NmuCI	GTSAC	2 cut(s)	379, 571
NotI	GCGGCCGC	1 cut(s)	132
NspI	RCATGY	1 cut(s)	991
PceI	AGGCCT	1 cut(s)	594
PciI	ACATGT	1 cut(s)	987
PctI	GAATGC	1 cut(s)	938
PdiI	GCCGGC	3 cut(s)	234, 246, 313
PfeI	GAWTC	3 cut(s)	193, 400, 835
Pfl23II	CGTACG	2 cut(s)	252, 357
PfoI	TCCNGGA	1 cut(s)	922
PinAI	ACCGGT	1 cut(s)	324
PkrI	GCNGC	5 cut(s)	81, 133, 136, 177, 276
PleI	GAGTC	1 cut(s)	421
PluTI	GGCGCC	2 cut(s)	239, 251
PpsI	GAGTC	1 cut(s)	421
Ppu21I	YACGTR	1 cut(s)	361
PscI	ACATGT	1 cut(s)	987
Psp6I	CCWGG	5 cut(s)	297, 594, 619, 813, 922
PspFI	CCCAGC	1 cut(s)	488
PspGI	CCWGG	5 cut(s)	297, 594, 619, 813, 922
PspLI	CGTACG	2 cut(s)	252, 357
PspN4I	GGNNCC	7 cut(s)	90, 237, 249, 273, 291, 323, 348
PspPI	GGNCC	8 cut(s)	88, 199, 289, 295, 309, 332, 598, 1094
PstNI	CAGNNNCTG	1 cut(s)	488
RsaI	GTAC	6 cut(s)	158, 215, 254, 323, 359, 579
RsaNI	GTAC	6 cut(s)	157, 214, 253, 322, 358, 578
RseI	CAYNNNNRTG	1 cut(s)	992
SaqAI	TTAA	2 cut(s)	555, 633
SatI	GCNGC	5 cut(s)	80, 132, 135, 176, 275
Sau3AI	GATC	3 cut(s)	256, 734, 919
Sau96I	GGNCC	8 cut(s)	88, 199, 289, 295, 309, 332, 598, 1094
SchI	GAGTC	1 cut(s)	422
SduI	GDGCHC	1 cut(s)	369
SfaNI	GCATC	3 cut(s)	286, 504, 722
SfcI	CTRYAG	2 cut(s)	756, 866
SfoI	GGCGCC	2 cut(s)	237, 249
SgrAI	CRCCGGYG	1 cut(s)	232
SinI	GGWCC	2 cut(s)	289, 1094
SmaI	CCCGGG	1 cut(s)	448
SmiMI	CAYNNNNRTG	1 cut(s)	992
Sse9I	AATT	6 cut(s)	304, 630, 809, 882, 889, 1044
SseBI	AGGCCT	1 cut(s)	594
SspDI	GGCGCC	2 cut(s)	235, 247
SspMI	CTAG	1 cut(s)	695
StuI	AGGCCT	1 cut(s)	594
StyI	CCWWGG	1 cut(s)	1011
TaaI	ACNGT	4 cut(s)	484, 533, 577, 970
TaiI	ACGT	2 cut(s)	126, 363
TaqI	TCGA	2 cut(s)	897, 1036
TasI	AATT	6 cut(s)	304, 630, 809, 882, 889, 1044
TatI	WGTACW	1 cut(s)	577
TauI	GCSGC	5 cut(s)	82, 134, 137, 178, 277
TfiI	GAWTC	3 cut(s)	193, 400, 835
Tru1I	TTAA	2 cut(s)	555, 633
Tru9I	TTAA	2 cut(s)	555, 633
TscAI	CASTG	3 cut(s)	246, 705, 1006
TseFI	GTSAC	2 cut(s)	379, 571
Tsp45I	GTSAC	2 cut(s)	379, 571
TspDTI	ATGAA	1 cut(s)	876
TspMI	CCCGGG	1 cut(s)	446
TspRI	CASTG	3 cut(s)	246, 705, 1006
VpaK11BI	GGWCC	2 cut(s)	289, 1094
XapI	RAATTY	1 cut(s)	809
XceI	RCATGY	1 cut(s)	991
XmaI	CCCGGG	1 cut(s)	446
XspI	CTAG	1 cut(s)	695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.