Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0011828

Physical Location & Seq

Genomic Coordinates Forward (+)

18226203 .. 18230179

Gene Structure 3977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG200800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGGGAAACATGGGCAGTAGTAGAGGCAACTCCTCCCGCCGGAGACACCACCACAACCGCCAGAGCCACCCGTCTCCGCCGCCACCGGCCCCACCACAGCCCGAAATCTCCGCCAACCGCTACGTCTTCGCGGCCGCGACGCCGTACCCGGCTCAGTACTCGAACCAAAACCCGCCGCAATACCCGAACCCGAACCAGGCCCAGTATTTCCAGTACCCGGGTTACTACCCGCCGGCGCCACTGCCGGCGCCGTACGATCACCACCACCACCGGGTGCCGCATCCGCAAATGGACCCGGCCCAGGCGAATTGGGCCGGCGGGAGGTACCGGTGCGGGCCGGTAATGCAGGCTCCGACGCCGTACGTGGAGCACCAGAAGGCGGTGACGATAAGGAACGATGTGAATCTGAAGAAGGAGTCTTTGAGGGTTGAACCGGATGAGGAAAACCCCGGGAGCTTTCTGTTGTCTTTCACTTTTGACGCCACAGTTGCTGGGAGCATCACCATCATCTTCTTTGCAAAGGAAGGCGAGGACTGTAACCTGACACCAACGAAGTTTAACCTCCTCCCACCTGTGACAGTACACTTTCAACAAGGCCTGGGCCAGAAGTTCAAACAACCCCCTGGAACTGGAATTAACTTCTCAATGTTTGACGAGACAGAGTTACTGAAAGTAGCTGGCTTGGATATCTATCCTCTGGCAGTGAAGGCAGAGGCATCCCCACCTGAGCATGATGGATCAGAGGGAAACTCTGTATCTGTAGCAACGAACTCCCAGATAACTCAGGCTGTATTTGAGAGGGAGAAAGGTGAATTCCAGGTGAGGGTTGTCAAGCAGATTCTTTGGGTGAGTGGGATGAGGTATGAACTACAGGAGATATATGGAATTGGTAATTCAGTCGAGGATGACTTGGACGGGAACGATCCAGGAAAAGAATGCGTCATTTGCCTGTCTGAACCACGGGACACAACTGTTCTTCCATGTCGGCACATGTGTATGTGCAGTGGGTGTGCCAAGGTTTTGAGATACCAGACAAACCGATGTCCAATTTGCCGACAACCAGTTGAGAGGCTTTTGGAGATAAAGGTCAACAATGGTCCTGAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005769 GO:0005829 GO:0005886 GO:0006464 GO:0006513 GO:0006807 GO:0006810 GO:0007034 GO:0007041 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008277 GO:0008333 GO:0008589 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016192 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0032446 GO:0032870 GO:0033993 GO:0036211 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043949 GO:0043951 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045744 GO:0045879 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055081 GO:0065007 GO:0065008 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080144 GO:0097305 GO:0097306 GO:0097708 GO:0140096 GO:1901527 GO:1901564 GO:1901700 GO:1901701 GO:1902531 GO:1902532

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

369

Amino Acids

41.16

Weight (kDa)

6.24

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNF157-like_N	PF26192	134 - 290	1.2e-69	RNF157-like N-terminal domain
zf-C3HC4_3	PF13920	311 - 357	1.6e-16	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	312 - 352	4.3e-07	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09770 AT3G09770
fragaria_vesca	FvH4_6g15750
malus_domestica	MD04G1099100.v1.1 MD12G1119700.v1.1
prunus_persica	Prupe.6G237500_v2.0.a1 Prupe.6G237500_v2.0.a1
pyrus_communis	pycom04g09400
rosa_chinensis	RchiOBHm_Chr3g0469461
rosa_laevigata	RLG00000024348
rosa_multiflora	Rmu_sc0005274.1_g000003 Rmu_sc0008852.1_g000003
rosa_roxburghii	Rroxscaffold_6G00411870
rosa_rugosa	Rorug03G0101900
rosa_samantha	Rh3AG150900 Rh3BG174600 Rh3CG165600 Rh3DG200800
rosa_wichuraiana	Rw3G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	324
AccB1I	GGYRCC	4 cut(s)	235, 247, 274, 324
AccII	CGCG	2 cut(s)	131, 137
AclWI	GGATC	2 cut(s)	745, 917
AcoI	YGGCCR	1 cut(s)	132
AcsI	RAATTY	1 cut(s)	812
AcuI	CTGAAG	1 cut(s)	428
AcyI	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
AdeI	CACNNNGTG	1 cut(s)	274
AfaI	GTAC	7 cut(s)	146, 158, 215, 254, 326, 362, 582
AfiI	CCNNNNNNNGG	9 cut(s)	39, 196, 217, 271, 301, 321, 379, 629, 823
AflIII	ACRYGT	1 cut(s)	990
AgeI	ACCGGT	1 cut(s)	327
AgsI	TTSAA	3 cut(s)	431, 590, 613
AjnI	CCWGG	6 cut(s)	195, 300, 597, 622, 816, 925
AluBI	AGCT	2 cut(s)	456, 677
AluI	AGCT	2 cut(s)	456, 677
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	3 cut(s)	37, 78, 650
AlwI	GGATC	2 cut(s)	745, 917
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	2 cut(s)	217, 449
AoxI	GGCC	8 cut(s)	87, 132, 198, 297, 312, 335, 595, 601
ApoI	RAATTY	1 cut(s)	812
AsiGI	ACCGGT	1 cut(s)	327
Asp718I	GGTACC	1 cut(s)	324
AspLEI	GCGC	2 cut(s)	238, 250
AspS9I	GGNCC	8 cut(s)	88, 199, 292, 298, 312, 335, 601, 1097
AsuC2I	CCSGG	7 cut(s)	149, 218, 219, 272, 296, 450, 451
AsuHPI	GGTGA	6 cut(s)	251, 394, 493, 821, 832, 859
AvaI	CYCGRG	2 cut(s)	217, 449
AvaII	GGWCC	2 cut(s)	292, 1097
AxyI	CCTNAGG	1 cut(s)	1101
BanI	GGYRCC	4 cut(s)	235, 247, 274, 324
BbsI	GAAGAC	1 cut(s)	118
Bbv12I	GWGCWC	1 cut(s)	372
BccI	CCATC	2 cut(s)	512, 728
BceAI	ACGGC	3 cut(s)	127, 235, 343
BciT130I	CCWGG	6 cut(s)	197, 302, 599, 624, 818, 927
BcnI	CCSGG	7 cut(s)	149, 218, 219, 272, 296, 450, 451
BcoDI	GTCTC	3 cut(s)	37, 78, 650
BfmI	CTRYAG	2 cut(s)	759, 869
BfoI	RGCGCY	2 cut(s)	239, 251
BisI	GCNGC	5 cut(s)	80, 132, 135, 176, 278
BlsI	GCNGC	5 cut(s)	81, 133, 136, 177, 279
BmcAI	AGTACT	1 cut(s)	158
Bme18I	GGWCC	2 cut(s)	292, 1097
BmeT110I	CYCGRG	2 cut(s)	217, 449
BmgT120I	GGNCC	8 cut(s)	88, 199, 292, 298, 312, 335, 601, 1097
BmiI	GGNNCC	7 cut(s)	90, 237, 249, 276, 294, 326, 351
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	3 cut(s)	289, 507, 725
BmuI	ACTGGG	1 cut(s)	196
BpiI	GAAGAC	1 cut(s)	118
BplI	GAGNNNNNCTC	2 cut(s)	734, 766
Bpu10I	CCTNAGC	1 cut(s)	726
BpuMI	CCSGG	7 cut(s)	149, 218, 219, 272, 296, 450, 451
BsaAI	YACGTR	1 cut(s)	364
BsaBI	GATNNNNATC	2 cut(s)	402, 690
BsaHI	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
BsaJI	CCNNGG	8 cut(s)	217, 300, 448, 449, 598, 622, 959, 1014
BsaWI	WCCGGW	2 cut(s)	327, 433
Bsc4I	CCNNNNNNNGG	9 cut(s)	39, 196, 217, 271, 301, 321, 379, 629, 823
Bse118I	RCCGGY	6 cut(s)	85, 232, 244, 314, 327, 337
Bse1I	ACTGG	4 cut(s)	202, 211, 634, 1061
Bse21I	CCTNAGG	1 cut(s)	1101
Bse8I	GATNNNNATC	2 cut(s)	402, 690
BseBI	CCWGG	6 cut(s)	197, 302, 599, 624, 818, 927
BseDI	CCNNGG	8 cut(s)	217, 300, 448, 449, 598, 622, 959, 1014
BseGI	GGATG	5 cut(s)	280, 442, 716, 861, 910
BseJI	GATNNNNATC	2 cut(s)	402, 690
BseLI	CCNNNNNNNGG	9 cut(s)	39, 196, 217, 271, 301, 321, 379, 629, 823
BseMII	CTCAG	4 cut(s)	167, 717, 797, 1092
BseNI	ACTGG	4 cut(s)	202, 211, 634, 1061
BseRI	GAGGAG	2 cut(s)	22, 554
BseX3I	CGGCCG	1 cut(s)	132
BseYI	CCCAGC	1 cut(s)	491
BsgI	GTGCAG	1 cut(s)	1021
Bsh1236I	CGCG	2 cut(s)	131, 137
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	8 cut(s)	89, 134, 200, 299, 314, 337, 597, 603
BshNI	GGYRCC	4 cut(s)	235, 247, 274, 324
BshTI	ACCGGT	1 cut(s)	327
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	372
BsiHKCI	CYCGRG	2 cut(s)	217, 449
BsiWI	CGTACG	2 cut(s)	252, 360
BslFI	GGGAC	1 cut(s)	977
BslI	CCNNNNNNNGG	9 cut(s)	39, 196, 217, 271, 301, 321, 379, 629, 823
BsmAI	GTCTC	3 cut(s)	37, 78, 650
BsmBI	CGTCTC	1 cut(s)	78
BsmFI	GGGAC	1 cut(s)	977
BsmI	GAATGC	1 cut(s)	941
BsnI	GGCC	8 cut(s)	89, 134, 200, 299, 314, 337, 597, 603
BsoBI	CYCGRG	2 cut(s)	217, 449
Bsp1286I	GDGCHC	1 cut(s)	372
Bsp143I	GATC	3 cut(s)	256, 737, 922
BspANI	GGCC	8 cut(s)	89, 134, 200, 299, 314, 337, 597, 603
BspCNI	CTCAG	4 cut(s)	166, 718, 796, 1093
BspFNI	CGCG	2 cut(s)	131, 137
BspLI	GGNNCC	7 cut(s)	90, 237, 249, 276, 294, 326, 351
BspPI	GGATC	2 cut(s)	745, 917
BspT107I	GGYRCC	4 cut(s)	235, 247, 274, 324
BsrFI	RCCGGY	6 cut(s)	85, 232, 244, 314, 327, 337
BsrI	ACTGG	4 cut(s)	202, 211, 634, 1061
BssAI	RCCGGY	6 cut(s)	85, 232, 244, 314, 327, 337
BssECI	CCNNGG	8 cut(s)	217, 300, 448, 449, 598, 622, 959, 1014
BssMI	GATC	3 cut(s)	256, 737, 922
BssNI	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
BssT1I	CCWWGG	1 cut(s)	1014
Bst2UI	CCWGG	6 cut(s)	197, 302, 599, 624, 818, 927
Bst4CI	ACNGT	4 cut(s)	487, 536, 580, 973
BstACI	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
BstBAI	YACGTR	1 cut(s)	364
BstC8I	GCNNGC	6 cut(s)	234, 246, 316, 335, 348, 679
BstDEI	CTNAG	4 cut(s)	153, 726, 783, 1101
BstDSI	CCRYGG	1 cut(s)	959
BstF5I	GGATG	5 cut(s)	280, 442, 716, 861, 910
BstFNI	CGCG	2 cut(s)	131, 137
BstH2I	RGCGCY	2 cut(s)	239, 251
BstHHI	GCGC	2 cut(s)	238, 250
BstKTI	GATC	3 cut(s)	259, 740, 925
BstMAI	GTCTC	3 cut(s)	37, 78, 650
BstMBI	GATC	3 cut(s)	256, 737, 922
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	6 cut(s)	283, 311, 343, 488, 707, 945
BstNI	CCWGG	6 cut(s)	197, 302, 599, 624, 818, 927
BstNSI	RCATGY	1 cut(s)	994
BstSFI	CTRYAG	2 cut(s)	759, 869
BstUI	CGCG	2 cut(s)	131, 137
BstV2I	GAAGAC	1 cut(s)	118
BstZI	CGGCCG	1 cut(s)	132
Bsu36I	CCTNAGG	1 cut(s)	1101
BsuRI	GGCC	8 cut(s)	89, 134, 200, 299, 314, 337, 597, 603
BtgI	CCRYGG	1 cut(s)	959
BtsCI	GGATG	5 cut(s)	280, 442, 716, 861, 910
BtsI	GCAGTG	3 cut(s)	239, 708, 1009
BtsIMutI	CAGTG	3 cut(s)	239, 708, 1009
Cac8I	GCNNGC	6 cut(s)	234, 246, 316, 335, 348, 679
CaiI	CAGNNNCTG	1 cut(s)	491
CciNI	GCGGCCGC	1 cut(s)	132
CfoI	GCGC	2 cut(s)	238, 250
Cfr10I	RCCGGY	6 cut(s)	85, 232, 244, 314, 327, 337
Cfr13I	GGNCC	8 cut(s)	88, 199, 292, 298, 312, 335, 601, 1097
Cfr9I	CCCGGG	2 cut(s)	217, 449
CseI	GACGC	4 cut(s)	148, 364, 488, 928
Csp6I	GTAC	7 cut(s)	145, 157, 214, 253, 325, 361, 581
CspAI	ACCGGT	1 cut(s)	327
CviAII	CATG	4 cut(s)	10, 731, 981, 991
CviQI	GTAC	7 cut(s)	145, 157, 214, 253, 325, 361, 581
DdeI	CTNAG	4 cut(s)	153, 726, 783, 1101
DinI	GGCGCC	2 cut(s)	237, 249
DpnI	GATC	3 cut(s)	258, 739, 924
DpnII	GATC	3 cut(s)	256, 737, 922
DraIII	CACNNNGTG	1 cut(s)	274
EaeI	YGGCCR	1 cut(s)	132
EagI	CGGCCG	1 cut(s)	132
EciI	GGCGGA	2 cut(s)	66, 100
EclXI	CGGCCG	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	1014
Eco147I	AGGCCT	1 cut(s)	597
Eco32I	GATATC	1 cut(s)	688
Eco47I	GGWCC	2 cut(s)	292, 1097
Eco52I	CGGCCG	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	428
Eco81I	CCTNAGG	1 cut(s)	1101
Eco88I	CYCGRG	2 cut(s)	217, 449
EcoRI	GAATTC	1 cut(s)	812
EcoRII	CCWGG	6 cut(s)	195, 300, 597, 622, 816, 925
EcoRV	GATATC	1 cut(s)	688
EcoT14I	CCWWGG	1 cut(s)	1014
EgeI	GGCGCC	2 cut(s)	237, 249
EheI	GGCGCC	2 cut(s)	237, 249
ErhI	CCWWGG	1 cut(s)	1014
Esp3I	CGTCTC	1 cut(s)	78
FaeI	CATG	4 cut(s)	13, 734, 984, 994
FaiI	YATR	8 cut(s)	11, 732, 864, 880, 882, 982, 992, 998
FaqI	GGGAC	1 cut(s)	977
FatI	CATG	4 cut(s)	9, 730, 980, 990
FauI	CCCGC	5 cut(s)	44, 180, 237, 311, 326
Fnu4HI	GCNGC	5 cut(s)	80, 132, 135, 176, 278
FokI	GGATG	5 cut(s)	267, 449, 703, 868, 917
Fsp4HI	GCNGC	5 cut(s)	80, 132, 135, 176, 278
GlaI	GCGC	2 cut(s)	237, 249
GluI	GCNGC	5 cut(s)	80, 132, 135, 176, 278
GsaI	CCCAGC	1 cut(s)	495
HaeII	RGCGCY	2 cut(s)	239, 251
HaeIII	GGCC	8 cut(s)	89, 134, 200, 299, 314, 337, 597, 603
HgaI	GACGC	4 cut(s)	148, 364, 488, 928
HhaI	GCGC	2 cut(s)	238, 250
Hin1I	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
Hin1II	CATG	4 cut(s)	13, 734, 984, 994
Hin6I	GCGC	2 cut(s)	236, 248
HinP1I	GCGC	2 cut(s)	236, 248
HincII	GTYRAC	1 cut(s)	1090
HindII	GTYRAC	1 cut(s)	1090
HinfI	GANTC	3 cut(s)	403, 416, 838
HphI	GGTGA	6 cut(s)	251, 394, 493, 821, 832, 859
Hpy166II	GTNNAC	2 cut(s)	583, 1090
Hpy188I	TCNGA	4 cut(s)	354, 408, 742, 955
Hpy188III	TCNNGA	1 cut(s)	1100
Hpy8I	GTNNAC	2 cut(s)	583, 1090
Hpy99I	CGWCG	2 cut(s)	142, 358
HpyAV	CCTTC	4 cut(s)	370, 406, 518, 700
HpyCH4III	ACNGT	4 cut(s)	487, 536, 580, 973
HpyCH4IV	ACGT	2 cut(s)	123, 363
HpyCH4V	TGCA	3 cut(s)	346, 518, 1002
HpyF10VI	GCNNNNNNNGC	6 cut(s)	283, 311, 343, 488, 707, 945
HpyF3I	CTNAG	4 cut(s)	153, 726, 783, 1101
HpySE526I	ACGT	2 cut(s)	123, 363
Hsp92I	GRCGYC	5 cut(s)	140, 236, 248, 356, 480
Hsp92II	CATG	4 cut(s)	13, 734, 984, 994
HspAI	GCGC	2 cut(s)	236, 248
KasI	GGCGCC	2 cut(s)	235, 247
KpnI	GGTACC	1 cut(s)	328
KroI	GCCGGC	3 cut(s)	232, 244, 314
KroNI	GCCGGC	3 cut(s)	234, 246, 316
Kzo9I	GATC	3 cut(s)	256, 737, 922
LmnI	GCTCC	4 cut(s)	355, 367, 453, 495
LweI	GCATC	3 cut(s)	289, 507, 725
MaeII	ACGT	2 cut(s)	123, 363
MaeIII	GTNAC	5 cut(s)	221, 382, 536, 574, 663
MalI	GATC	3 cut(s)	258, 739, 924
MboI	GATC	3 cut(s)	256, 737, 922
MboII	GAAGA	4 cut(s)	118, 421, 502, 968
MhlI	GDGCHC	1 cut(s)	372
MluCI	AATT	6 cut(s)	307, 633, 812, 885, 892, 1047
Mly113I	GGCGCC	2 cut(s)	236, 248
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	1 cut(s)	377
MreI	CGCCGGCG	1 cut(s)	232
MroNI	GCCGGC	3 cut(s)	232, 244, 314
MseI	TTAA	2 cut(s)	558, 636
MslI	CAYNNNNRTG	1 cut(s)	995
Mva1269I	GAATGC	1 cut(s)	941
MvaI	CCWGG	6 cut(s)	197, 302, 599, 624, 818, 927
MvnI	CGCG	2 cut(s)	131, 137
MwoI	GCNNNNNNNGC	6 cut(s)	283, 311, 343, 488, 707, 945
NaeI	GCCGGC	3 cut(s)	234, 246, 316
NarI	GGCGCC	2 cut(s)	236, 248
NciI	CCSGG	7 cut(s)	149, 218, 219, 272, 296, 450, 451
NdeII	GATC	3 cut(s)	256, 737, 922
NgoMIV	GCCGGC	3 cut(s)	232, 244, 314
NlaIII	CATG	4 cut(s)	13, 734, 984, 994
NlaIV	GGNNCC	7 cut(s)	90, 237, 249, 276, 294, 326, 351
NmuCI	GTSAC	2 cut(s)	382, 574
NotI	GCGGCCGC	1 cut(s)	132
NspI	RCATGY	1 cut(s)	994
PceI	AGGCCT	1 cut(s)	597
PciI	ACATGT	1 cut(s)	990
PctI	GAATGC	1 cut(s)	941
PdiI	GCCGGC	3 cut(s)	234, 246, 316
PfeI	GAWTC	2 cut(s)	403, 838
Pfl23II	CGTACG	2 cut(s)	252, 360
PfoI	TCCNGGA	1 cut(s)	925
PinAI	ACCGGT	1 cut(s)	327
PkrI	GCNGC	5 cut(s)	81, 133, 136, 177, 279
PleI	GAGTC	1 cut(s)	424
PluTI	GGCGCC	2 cut(s)	239, 251
PpsI	GAGTC	1 cut(s)	424
Ppu21I	YACGTR	1 cut(s)	364
PscI	ACATGT	1 cut(s)	990
Psp6I	CCWGG	6 cut(s)	195, 300, 597, 622, 816, 925
PspFI	CCCAGC	1 cut(s)	491
PspGI	CCWGG	6 cut(s)	195, 300, 597, 622, 816, 925
PspLI	CGTACG	2 cut(s)	252, 360
PspN4I	GGNNCC	7 cut(s)	90, 237, 249, 276, 294, 326, 351
PspPI	GGNCC	8 cut(s)	88, 199, 292, 298, 312, 335, 601, 1097
PstNI	CAGNNNCTG	1 cut(s)	491
RsaI	GTAC	7 cut(s)	146, 158, 215, 254, 326, 362, 582
RsaNI	GTAC	7 cut(s)	145, 157, 214, 253, 325, 361, 581
RseI	CAYNNNNRTG	1 cut(s)	995
SaqAI	TTAA	2 cut(s)	558, 636
SatI	GCNGC	5 cut(s)	80, 132, 135, 176, 278
Sau3AI	GATC	3 cut(s)	256, 737, 922
Sau96I	GGNCC	8 cut(s)	88, 199, 292, 298, 312, 335, 601, 1097
ScaI	AGTACT	1 cut(s)	158
SchI	GAGTC	1 cut(s)	425
SduI	GDGCHC	1 cut(s)	372
SfaNI	GCATC	3 cut(s)	289, 507, 725
SfcI	CTRYAG	2 cut(s)	759, 869
SfoI	GGCGCC	2 cut(s)	237, 249
SgrAI	CRCCGGYG	1 cut(s)	232
SinI	GGWCC	2 cut(s)	292, 1097
SmaI	CCCGGG	2 cut(s)	219, 451
SmiMI	CAYNNNNRTG	1 cut(s)	995
Sse9I	AATT	6 cut(s)	307, 633, 812, 885, 892, 1047
SseBI	AGGCCT	1 cut(s)	597
SspDI	GGCGCC	2 cut(s)	235, 247
StuI	AGGCCT	1 cut(s)	597
StyI	CCWWGG	1 cut(s)	1014
TaaI	ACNGT	4 cut(s)	487, 536, 580, 973
TaiI	ACGT	2 cut(s)	126, 366
TaqI	TCGA	2 cut(s)	161, 900
TasI	AATT	6 cut(s)	307, 633, 812, 885, 892, 1047
TatI	WGTACW	2 cut(s)	156, 580
TauI	GCSGC	5 cut(s)	82, 134, 137, 178, 280
TfiI	GAWTC	2 cut(s)	403, 838
Tru1I	TTAA	2 cut(s)	558, 636
Tru9I	TTAA	2 cut(s)	558, 636
TscAI	CASTG	3 cut(s)	246, 708, 1009
TseFI	GTSAC	2 cut(s)	382, 574
Tsp45I	GTSAC	2 cut(s)	382, 574
TspDTI	ATGAA	1 cut(s)	879
TspMI	CCCGGG	2 cut(s)	217, 449
TspRI	CASTG	3 cut(s)	246, 708, 1009
VpaK11BI	GGWCC	2 cut(s)	292, 1097
XapI	RAATTY	1 cut(s)	812
XceI	RCATGY	1 cut(s)	994
XmaI	CCCGGG	2 cut(s)	217, 449
ZrmI	AGTACT	1 cut(s)	158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.