E3 ubiquitin-protein ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G09770 AT3G09770 |
| fragaria_vesca | FvH4_6g15750 |
| malus_domestica | MD04G1099100.v1.1 MD12G1119700.v1.1 |
| prunus_persica | Prupe.6G237500_v2.0.a1 Prupe.6G237500_v2.0.a1 |
| pyrus_communis | pycom04g09400 |
| rosa_chinensis | RchiOBHm_Chr3g0469461 |
| rosa_laevigata | RLG00000024348 |
| rosa_multiflora | Rmu_sc0005274.1_g000003 Rmu_sc0008852.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00411870 |
| rosa_rugosa | Rorug03G0101900 |
| rosa_samantha | Rh3AG150900 Rh3BG174600 Rh3CG165600 Rh3DG200800 |
| rosa_wichuraiana | Rw3G014250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 555 |
| AccB1I | GGYRCC | 4 cut(s) | 469, 481, 505, 555 |
| AccII | CGCG | 2 cut(s) | 131, 371 |
| AclWI | GGATC | 3 cut(s) | 976, 1063, 1148 |
| AcsI | RAATTY | 2 cut(s) | 217, 1043 |
| AcuI | CTGAAG | 1 cut(s) | 659 |
| AcyI | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| AdeI | CACNNNGTG | 1 cut(s) | 505 |
| AfaI | GTAC | 9 cut(s) | 146, 158, 380, 392, 449, 488, 557, 593, 813 |
| AflIII | ACRYGT | 1 cut(s) | 1221 |
| AgeI | ACCGGT | 1 cut(s) | 558 |
| AgsI | TTSAA | 3 cut(s) | 662, 821, 844 |
| AjnI | CCWGG | 7 cut(s) | 195, 429, 531, 828, 853, 1047, 1156 |
| AluBI | AGCT | 2 cut(s) | 687, 908 |
| AluI | AGCT | 2 cut(s) | 687, 908 |
| Alw21I | GWGCWC | 1 cut(s) | 603 |
| Alw26I | GTCTC | 5 cut(s) | 37, 78, 271, 312, 881 |
| AlwI | GGATC | 3 cut(s) | 976, 1063, 1148 |
| Ama87I | CYCGRG | 2 cut(s) | 451, 680 |
| AoxI | GGCC | 9 cut(s) | 87, 198, 321, 432, 528, 543, 566, 826, 832 |
| ApeKI | GCWGC | 2 cut(s) | 365, 1233 |
| ApoI | RAATTY | 2 cut(s) | 217, 1043 |
| AsiGI | ACCGGT | 1 cut(s) | 558 |
| Asp718I | GGTACC | 1 cut(s) | 555 |
| AspLEI | GCGC | 2 cut(s) | 472, 484 |
| AsuC2I | CCSGG | 8 cut(s) | 149, 383, 452, 453, 503, 527, 681, 682 |
| AsuHPI | GGTGA | 6 cut(s) | 485, 625, 724, 1052, 1063, 1090 |
| AvaI | CYCGRG | 2 cut(s) | 451, 680 |
| AvaII | GGWCC | 2 cut(s) | 523, 1328 |
| AxyI | CCTNAGG | 1 cut(s) | 1332 |
| BanI | GGYRCC | 4 cut(s) | 469, 481, 505, 555 |
| BbsI | GAAGAC | 2 cut(s) | 118, 352 |
| Bbv12I | GWGCWC | 1 cut(s) | 603 |
| BbvI | GCAGC | 2 cut(s) | 352, 1245 |
| BccI | CCATC | 3 cut(s) | 514, 743, 959 |
| BceAI | ACGGC | 4 cut(s) | 127, 361, 469, 574 |
| BciT130I | CCWGG | 7 cut(s) | 197, 431, 533, 830, 855, 1049, 1158 |
| BcnI | CCSGG | 8 cut(s) | 149, 383, 452, 453, 503, 527, 681, 682 |
| BcoDI | GTCTC | 5 cut(s) | 37, 78, 271, 312, 881 |
| BfaI | CTAG | 1 cut(s) | 929 |
| BfmI | CTRYAG | 1 cut(s) | 1100 |
| BfoI | RGCGCY | 2 cut(s) | 473, 485 |
| Bme18I | GGWCC | 2 cut(s) | 523, 1328 |
| BmeT110I | CYCGRG | 2 cut(s) | 451, 680 |
| BmiI | GGNNCC | 8 cut(s) | 90, 324, 471, 483, 507, 525, 557, 582 |
| BmrI | ACTGGG | 1 cut(s) | 430 |
| BmsI | GCATC | 4 cut(s) | 520, 700, 738, 956 |
| BmuI | ACTGGG | 1 cut(s) | 430 |
| BpiI | GAAGAC | 2 cut(s) | 118, 352 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 965, 997 |
| Bpu10I | CCTNAGC | 1 cut(s) | 957 |
| BpuMI | CCSGG | 8 cut(s) | 149, 383, 452, 453, 503, 527, 681, 682 |
| BsaAI | YACGTR | 1 cut(s) | 595 |
| BsaBI | GATNNNNATC | 2 cut(s) | 633, 921 |
| BsaHI | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| BsaJI | CCNNGG | 8 cut(s) | 451, 531, 679, 680, 829, 853, 1190, 1245 |
| BsaWI | WCCGGW | 2 cut(s) | 558, 664 |
| Bse118I | RCCGGY | 7 cut(s) | 85, 319, 466, 478, 545, 558, 568 |
| Bse1I | ACTGG | 4 cut(s) | 436, 445, 865, 1292 |
| Bse21I | CCTNAGG | 1 cut(s) | 1332 |
| Bse8I | GATNNNNATC | 2 cut(s) | 633, 921 |
| BseBI | CCWGG | 7 cut(s) | 197, 431, 533, 830, 855, 1049, 1158 |
| BseDI | CCNNGG | 8 cut(s) | 451, 531, 679, 680, 829, 853, 1190, 1245 |
| BseGI | GGATG | 5 cut(s) | 511, 673, 947, 1092, 1141 |
| BseJI | GATNNNNATC | 2 cut(s) | 633, 921 |
| BseMII | CTCAG | 5 cut(s) | 167, 401, 948, 1028, 1323 |
| BseNI | ACTGG | 4 cut(s) | 436, 445, 865, 1292 |
| BseRI | GAGGAG | 3 cut(s) | 22, 256, 785 |
| BseXI | GCAGC | 2 cut(s) | 352, 1245 |
| BseYI | CCCAGC | 1 cut(s) | 722 |
| BsgI | GTGCAG | 1 cut(s) | 1252 |
| Bsh1236I | CGCG | 2 cut(s) | 131, 371 |
| BshFI | GGCC | 9 cut(s) | 89, 200, 323, 434, 530, 545, 568, 828, 834 |
| BshNI | GGYRCC | 4 cut(s) | 469, 481, 505, 555 |
| BshTI | ACCGGT | 1 cut(s) | 558 |
| BsiHKAI | GWGCWC | 1 cut(s) | 603 |
| BsiHKCI | CYCGRG | 2 cut(s) | 451, 680 |
| BsiWI | CGTACG | 2 cut(s) | 486, 591 |
| BslFI | GGGAC | 1 cut(s) | 1208 |
| BsmAI | GTCTC | 5 cut(s) | 37, 78, 271, 312, 881 |
| BsmBI | CGTCTC | 2 cut(s) | 78, 312 |
| BsmFI | GGGAC | 1 cut(s) | 1208 |
| BsmI | GAATGC | 1 cut(s) | 1172 |
| BsnI | GGCC | 9 cut(s) | 89, 200, 323, 434, 530, 545, 568, 828, 834 |
| BsoBI | CYCGRG | 2 cut(s) | 451, 680 |
| Bsp1286I | GDGCHC | 1 cut(s) | 603 |
| Bsp143I | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| BspANI | GGCC | 9 cut(s) | 89, 200, 323, 434, 530, 545, 568, 828, 834 |
| BspCNI | CTCAG | 5 cut(s) | 166, 400, 949, 1027, 1324 |
| BspFNI | CGCG | 2 cut(s) | 131, 371 |
| BspLI | GGNNCC | 8 cut(s) | 90, 324, 471, 483, 507, 525, 557, 582 |
| BspPI | GGATC | 3 cut(s) | 976, 1063, 1148 |
| BspT107I | GGYRCC | 4 cut(s) | 469, 481, 505, 555 |
| BsrFI | RCCGGY | 7 cut(s) | 85, 319, 466, 478, 545, 558, 568 |
| BsrI | ACTGG | 4 cut(s) | 436, 445, 865, 1292 |
| BssAI | RCCGGY | 7 cut(s) | 85, 319, 466, 478, 545, 558, 568 |
| BssECI | CCNNGG | 8 cut(s) | 451, 531, 679, 680, 829, 853, 1190, 1245 |
| BssMI | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| BssNI | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| BssT1I | CCWWGG | 1 cut(s) | 1245 |
| Bst2UI | CCWGG | 7 cut(s) | 197, 431, 533, 830, 855, 1049, 1158 |
| Bst4CI | ACNGT | 4 cut(s) | 718, 767, 811, 1204 |
| BstACI | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| BstBAI | YACGTR | 1 cut(s) | 595 |
| BstC8I | GCNNGC | 6 cut(s) | 468, 480, 547, 566, 579, 910 |
| BstDEI | CTNAG | 5 cut(s) | 153, 387, 957, 1014, 1332 |
| BstDSI | CCRYGG | 1 cut(s) | 1190 |
| BstF5I | GGATG | 5 cut(s) | 511, 673, 947, 1092, 1141 |
| BstFNI | CGCG | 2 cut(s) | 131, 371 |
| BstH2I | RGCGCY | 2 cut(s) | 473, 485 |
| BstHHI | GCGC | 2 cut(s) | 472, 484 |
| BstKTI | GATC | 4 cut(s) | 493, 971, 1071, 1156 |
| BstMAI | GTCTC | 5 cut(s) | 37, 78, 271, 312, 881 |
| BstMBI | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 514, 542, 574, 719, 938, 1176 |
| BstNI | CCWGG | 7 cut(s) | 197, 431, 533, 830, 855, 1049, 1158 |
| BstNSI | RCATGY | 1 cut(s) | 1225 |
| BstSFI | CTRYAG | 1 cut(s) | 1100 |
| BstUI | CGCG | 2 cut(s) | 131, 371 |
| BstV1I | GCAGC | 2 cut(s) | 352, 1245 |
| BstV2I | GAAGAC | 2 cut(s) | 118, 352 |
| BstX2I | RGATCY | 1 cut(s) | 1068 |
| BstYI | RGATCY | 1 cut(s) | 1068 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1332 |
| BsuRI | GGCC | 9 cut(s) | 89, 200, 323, 434, 530, 545, 568, 828, 834 |
| BtgI | CCRYGG | 1 cut(s) | 1190 |
| BtsCI | GGATG | 5 cut(s) | 511, 673, 947, 1092, 1141 |
| BtsI | GCAGTG | 2 cut(s) | 473, 939 |
| BtsIMutI | CAGTG | 3 cut(s) | 473, 714, 939 |
| Cac8I | GCNNGC | 6 cut(s) | 468, 480, 547, 566, 579, 910 |
| CfoI | GCGC | 2 cut(s) | 472, 484 |
| Cfr10I | RCCGGY | 7 cut(s) | 85, 319, 466, 478, 545, 558, 568 |
| Cfr9I | CCCGGG | 2 cut(s) | 451, 680 |
| CseI | GACGC | 4 cut(s) | 148, 382, 595, 1159 |
| Csp6I | GTAC | 9 cut(s) | 145, 157, 379, 391, 448, 487, 556, 592, 812 |
| CspAI | ACCGGT | 1 cut(s) | 558 |
| CviAII | CATG | 5 cut(s) | 10, 244, 962, 1212, 1222 |
| CviQI | GTAC | 9 cut(s) | 145, 157, 379, 391, 448, 487, 556, 592, 812 |
| DdeI | CTNAG | 5 cut(s) | 153, 387, 957, 1014, 1332 |
| DinI | GGCGCC | 2 cut(s) | 471, 483 |
| DpnI | GATC | 4 cut(s) | 492, 970, 1070, 1155 |
| DpnII | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| DraI | TTTAAA | 1 cut(s) | 222 |
| DraIII | CACNNNGTG | 1 cut(s) | 505 |
| EciI | GGCGGA | 4 cut(s) | 66, 100, 300, 334 |
| Eco130I | CCWWGG | 1 cut(s) | 1245 |
| Eco147I | AGGCCT | 1 cut(s) | 828 |
| Eco32I | GATATC | 1 cut(s) | 919 |
| Eco47I | GGWCC | 2 cut(s) | 523, 1328 |
| Eco57I | CTGAAG | 1 cut(s) | 659 |
| Eco81I | CCTNAGG | 1 cut(s) | 1332 |
| Eco88I | CYCGRG | 2 cut(s) | 451, 680 |
| EcoRI | GAATTC | 1 cut(s) | 1043 |
| EcoRII | CCWGG | 7 cut(s) | 195, 429, 531, 828, 853, 1047, 1156 |
| EcoRV | GATATC | 1 cut(s) | 919 |
| EcoT14I | CCWWGG | 1 cut(s) | 1245 |
| EgeI | GGCGCC | 2 cut(s) | 471, 483 |
| EheI | GGCGCC | 2 cut(s) | 471, 483 |
| ErhI | CCWWGG | 1 cut(s) | 1245 |
| Esp3I | CGTCTC | 2 cut(s) | 78, 312 |
| FaeI | CATG | 5 cut(s) | 13, 247, 965, 1215, 1225 |
| FaqI | GGGAC | 1 cut(s) | 1208 |
| FatI | CATG | 5 cut(s) | 9, 243, 961, 1211, 1221 |
| FauI | CCCGC | 8 cut(s) | 44, 180, 278, 414, 471, 542, 557, 1229 |
| FokI | GGATG | 5 cut(s) | 498, 680, 934, 1099, 1148 |
| FspBI | CTAG | 1 cut(s) | 929 |
| GlaI | GCGC | 2 cut(s) | 471, 483 |
| GsaI | CCCAGC | 1 cut(s) | 726 |
| HaeII | RGCGCY | 2 cut(s) | 473, 485 |
| HaeIII | GGCC | 9 cut(s) | 89, 200, 323, 434, 530, 545, 568, 828, 834 |
| HgaI | GACGC | 4 cut(s) | 148, 382, 595, 1159 |
| HhaI | GCGC | 2 cut(s) | 472, 484 |
| Hin1I | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| Hin1II | CATG | 5 cut(s) | 13, 247, 965, 1215, 1225 |
| Hin6I | GCGC | 2 cut(s) | 470, 482 |
| HinP1I | GCGC | 2 cut(s) | 470, 482 |
| HincII | GTYRAC | 1 cut(s) | 1321 |
| HindII | GTYRAC | 1 cut(s) | 1321 |
| HinfI | GANTC | 2 cut(s) | 634, 647 |
| HphI | GGTGA | 6 cut(s) | 485, 625, 724, 1052, 1063, 1090 |
| Hpy166II | GTNNAC | 2 cut(s) | 814, 1321 |
| Hpy188I | TCNGA | 4 cut(s) | 585, 639, 973, 1186 |
| Hpy188III | TCNNGA | 1 cut(s) | 1331 |
| Hpy8I | GTNNAC | 2 cut(s) | 814, 1321 |
| Hpy99I | CGWCG | 3 cut(s) | 142, 376, 589 |
| HpyAV | CCTTC | 4 cut(s) | 601, 637, 749, 931 |
| HpyCH4III | ACNGT | 4 cut(s) | 718, 767, 811, 1204 |
| HpyCH4IV | ACGT | 3 cut(s) | 123, 357, 594 |
| HpyCH4V | TGCA | 3 cut(s) | 577, 749, 1233 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 514, 542, 574, 719, 938, 1176 |
| HpyF3I | CTNAG | 5 cut(s) | 153, 387, 957, 1014, 1332 |
| HpySE526I | ACGT | 3 cut(s) | 123, 357, 594 |
| Hsp92I | GRCGYC | 5 cut(s) | 140, 374, 470, 482, 587 |
| Hsp92II | CATG | 5 cut(s) | 13, 247, 965, 1215, 1225 |
| HspAI | GCGC | 2 cut(s) | 470, 482 |
| KasI | GGCGCC | 2 cut(s) | 469, 481 |
| KpnI | GGTACC | 1 cut(s) | 559 |
| KroI | GCCGGC | 3 cut(s) | 466, 478, 545 |
| KroNI | GCCGGC | 3 cut(s) | 468, 480, 547 |
| Kzo9I | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| LmnI | GCTCC | 4 cut(s) | 586, 598, 684, 726 |
| Lsp1109I | GCAGC | 2 cut(s) | 352, 1245 |
| LweI | GCATC | 4 cut(s) | 520, 700, 738, 956 |
| MaeI | CTAG | 1 cut(s) | 929 |
| MaeII | ACGT | 3 cut(s) | 123, 357, 594 |
| MaeIII | GTNAC | 6 cut(s) | 455, 613, 767, 805, 894, 991 |
| MalI | GATC | 4 cut(s) | 492, 970, 1070, 1155 |
| MboI | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| MboII | GAAGA | 5 cut(s) | 118, 352, 652, 733, 1199 |
| MflI | RGATCY | 1 cut(s) | 1068 |
| MhlI | GDGCHC | 1 cut(s) | 603 |
| MluCI | AATT | 8 cut(s) | 203, 217, 538, 864, 1043, 1116, 1123, 1278 |
| Mly113I | GGCGCC | 2 cut(s) | 470, 482 |
| MlyI | GAGTC | 1 cut(s) | 656 |
| MmeI | TCCRAC | 1 cut(s) | 608 |
| MreI | CGCCGGCG | 1 cut(s) | 466 |
| MroNI | GCCGGC | 3 cut(s) | 466, 478, 545 |
| MseI | TTAA | 3 cut(s) | 221, 789, 867 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1226 |
| MspA1I | CMGCKG | 1 cut(s) | 1236 |
| Mva1269I | GAATGC | 1 cut(s) | 1172 |
| MvaI | CCWGG | 7 cut(s) | 197, 431, 533, 830, 855, 1049, 1158 |
| MvnI | CGCG | 2 cut(s) | 131, 371 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 514, 542, 574, 719, 938, 1176 |
| NaeI | GCCGGC | 3 cut(s) | 468, 480, 547 |
| NarI | GGCGCC | 2 cut(s) | 470, 482 |
| NciI | CCSGG | 8 cut(s) | 149, 383, 452, 453, 503, 527, 681, 682 |
| NdeII | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| NgoMIV | GCCGGC | 3 cut(s) | 466, 478, 545 |
| NlaIII | CATG | 5 cut(s) | 13, 247, 965, 1215, 1225 |
| NlaIV | GGNNCC | 8 cut(s) | 90, 324, 471, 483, 507, 525, 557, 582 |
| NmuCI | GTSAC | 2 cut(s) | 613, 805 |
| NspI | RCATGY | 1 cut(s) | 1225 |
| PceI | AGGCCT | 1 cut(s) | 828 |
| PciI | ACATGT | 1 cut(s) | 1221 |
| PctI | GAATGC | 1 cut(s) | 1172 |
| PdiI | GCCGGC | 3 cut(s) | 468, 480, 547 |
| PfeI | GAWTC | 1 cut(s) | 634 |
| Pfl23II | CGTACG | 2 cut(s) | 486, 591 |
| PfoI | TCCNGGA | 1 cut(s) | 1156 |
| PinAI | ACCGGT | 1 cut(s) | 558 |
| PleI | GAGTC | 1 cut(s) | 655 |
| PluTI | GGCGCC | 2 cut(s) | 473, 485 |
| PpsI | GAGTC | 1 cut(s) | 655 |
| Ppu21I | YACGTR | 1 cut(s) | 595 |
| PscI | ACATGT | 1 cut(s) | 1221 |
| Psp6I | CCWGG | 7 cut(s) | 195, 429, 531, 828, 853, 1047, 1156 |
| PspFI | CCCAGC | 1 cut(s) | 722 |
| PspGI | CCWGG | 7 cut(s) | 195, 429, 531, 828, 853, 1047, 1156 |
| PspLI | CGTACG | 2 cut(s) | 486, 591 |
| PspN4I | GGNNCC | 8 cut(s) | 90, 324, 471, 483, 507, 525, 557, 582 |
| PsuI | RGATCY | 1 cut(s) | 1068 |
| RsaI | GTAC | 9 cut(s) | 146, 158, 380, 392, 449, 488, 557, 593, 813 |
| RsaNI | GTAC | 9 cut(s) | 145, 157, 379, 391, 448, 487, 556, 592, 812 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1226 |
| SaqAI | TTAA | 3 cut(s) | 221, 789, 867 |
| Sau3AI | GATC | 4 cut(s) | 490, 968, 1068, 1153 |
| SchI | GAGTC | 1 cut(s) | 656 |
| SduI | GDGCHC | 1 cut(s) | 603 |
| SfaNI | GCATC | 4 cut(s) | 520, 700, 738, 956 |
| SfcI | CTRYAG | 1 cut(s) | 1100 |
| SfoI | GGCGCC | 2 cut(s) | 471, 483 |
| SgrAI | CRCCGGYG | 1 cut(s) | 466 |
| SinI | GGWCC | 2 cut(s) | 523, 1328 |
| SmaI | CCCGGG | 2 cut(s) | 453, 682 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1226 |
| Sse9I | AATT | 8 cut(s) | 203, 217, 538, 864, 1043, 1116, 1123, 1278 |
| SseBI | AGGCCT | 1 cut(s) | 828 |
| SspDI | GGCGCC | 2 cut(s) | 469, 481 |
| SspMI | CTAG | 1 cut(s) | 929 |
| StuI | AGGCCT | 1 cut(s) | 828 |
| StyI | CCWWGG | 1 cut(s) | 1245 |
| TaaI | ACNGT | 4 cut(s) | 718, 767, 811, 1204 |
| TaiI | ACGT | 3 cut(s) | 126, 360, 597 |
| TaqI | TCGA | 1 cut(s) | 1131 |
| TasI | AATT | 8 cut(s) | 203, 217, 538, 864, 1043, 1116, 1123, 1278 |
| TatI | WGTACW | 1 cut(s) | 811 |
| TauI | GCSGC | 8 cut(s) | 82, 134, 137, 178, 316, 371, 412, 511 |
| TfiI | GAWTC | 1 cut(s) | 634 |
| Tru1I | TTAA | 3 cut(s) | 221, 789, 867 |
| Tru9I | TTAA | 3 cut(s) | 221, 789, 867 |
| TscAI | CASTG | 3 cut(s) | 480, 721, 939 |
| TseFI | GTSAC | 2 cut(s) | 613, 805 |
| TseI | GCWGC | 2 cut(s) | 365, 1233 |
| Tsp45I | GTSAC | 2 cut(s) | 613, 805 |
| TspDTI | ATGAA | 1 cut(s) | 1110 |
| TspMI | CCCGGG | 2 cut(s) | 451, 680 |
| TspRI | CASTG | 3 cut(s) | 480, 721, 939 |
| VpaK11BI | GGWCC | 2 cut(s) | 523, 1328 |
| XapI | RAATTY | 2 cut(s) | 217, 1043 |
| XceI | RCATGY | 1 cut(s) | 1225 |
| XmaI | CCCGGG | 2 cut(s) | 451, 680 |
| XspI | CTAG | 1 cut(s) | 929 |