Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0011681

Physical Location & Seq

Genomic Coordinates Reverse (-)

37331237 .. 37336472

Gene Structure 5236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024593

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1902 bp

ATGAGCAGTTGGACGAAGCTGGATGAGGATCTTGGACCGGAGCGCGGGGACGATGATTTTTTAACAGATGATGAAGAGAACCAAGCACACAGAAACAACTATGAGCCTTCCGAAGCCGAAACTGAATCTGAAGTAGGCAGACCTGAGGGCATTGCCATTAGTGCACCTAACAATAATGCATGGCCTCAGAGCTACTGGCAGTCCATCGATATGTACACCAATGTCATGACTCCTCCTTCCCTTCCTTCCCTTACTTTTATGCGATCAAGAGGGCCCAGTTTCAGCTCCTTGTCTTCGTTTGTTAAATGGCAACAAGCACCTGATGATAATTCTTCACAGCTCAGTGGCAAATTACTTGCTTCCGAAGCAAGTTTAGAAAAAGAAGGGCTTGCAGCTTCATCTCCCCCAACTCTCTCCGCAAAAAATTCTGTCTGTGAATTGCCACCGCCAAAGGAACATAGTTGTTCATTTTCACAAGCTGTACTCAATGGAATCAATGTCTTGTGTGGGATGGGACTAATTACAACACCATATGCAATAAAAGAAGGAGGGTGGTTGAGCCTCATTTTACTTGCATTGTTTGGTGTGATATGTTGCTATACTGGAATTTTATTAATGCGATGTTTAGAAAGTTGTCCTGGACTCCGAACCTATCCAGATATTGGCCAGGCTGCTTTTGGCTCGACTGGCCGTTTAATTCTATCTGGTGCTTGTGTGGAGTTTTTAACGATGATGGGCGATAACTTAGCGGCAATATTCCCAAACACCCACATAGCATTTGCAGGAATCCATCTTCAAAGTCATGAAATTTTTGCCATCACAGCAACTCTTGTAGTTCTTCCCACTGTATGGCTTCAAAATCTTAGTTTGCTCTCTTACCTCTCAGTTGGAGGAGTAGGTGCATCGATTCTGGTGGCCTTTTTATTGCTGTGGGTTGGGGCTGTGAACCAAGTTGGCTTTCATCACAGTGGATCCGCCTTAAACCTTTCCGGGTTGTCTGTCACAATTGGTATATATGGTTTCGGCTACGCTGGTCATTCAGTGTTCCCAAATATCTACACATCTATGAGAAAACCATCTCAATTTCCAGCAGTTCTACTAACCTGTGGTGCCTTTTGCTTCTTCATGTATACTGGGGTAGCAATATGTGGCTATCTAATGTTTGGAGACTCGATCAGGTCTCAGTTCACTCTAAACATGCCCGAAGAATTTGTTGCTTCAAAAATTGCAGTCTGGACAACAATTGTGAACCCGATGACAAAGTATGCCCTCACAATAACGCCGGTTGCTCTGAGTTTAGAGGAACTCTTTCCTGTAGCTTGGATGGGATCTCATTTGGCTTCAATCCTTACAAGAACAGTTCTAGTTCTATCAACTTTGGTCGTAGCGTTGAGCTTTCCGTTCTTTGGTGCGGTGATGGCATTGATGGGATCCTTACTTGCAATGTTAGTGGCTATTATCTTCCCAGGGGTGTGTTATCTCATCCTACTTAAAGGTAGATTAACCAAGTCGCAGTTACCACGTCTAGAGGAGACGGCGGCAACGACAGCACAACACCATCTCCGTCGAGATCATCATGTTGGAACCTGCTCTCTCGACGGCACAACGTTTCGAATGGTCTCTCTCAAGGTGGAACTTGCTCTTGCGAGGGATGTATTTCTAGATAGCATCAGTGGGGTTGATGTAGAAGACCAATTGGTCCTGGAAGATGTTGAGGACGATCACGATGAAGCCGGTGATGCAGCTAAAGGTGAAGTCGCAGGTCCAAAGGCGGTGGGAGGAGGTGAAGAGGAAAGGGAGAGTGAAGATCAGAGAGTGGGTGGGAGTGCCTATGGCTGGGGATGGGAATGGGAGAATGATGAGAAGTTCGACGGCAAAGATTTGTGTTCATCGATGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009536 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0022857 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098656 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

ko04721 ko04723 ko04727 ko05032 ko05033 map04721 map04723 map04727 map05032 map05033

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

634

Amino Acids

68.43

Weight (kDa)

4.78

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	155 - 502	1.2e-59	Transmembrane amino acid transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09330 AT3G09340 AT5G02170 AT5G02170 AT5G02180 AT5G02180
fragaria_vesca	FvH4_6g13370 FvH4_6g13370
malus_domestica	MD12G1144700.v1.1
prunus_persica	Prupe.6G258200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0466251
rosa_laevigata	RLG00000024593
rosa_multiflora	Rmu_sc0000350.1_g000014 Rmu_sc0022084.1_g000006
rosa_roxburghii	Rroxscaffold_6G00414690
rosa_rugosa	Rorug03G0080600
rosa_samantha	Rh3BG148000 Rh3DG148700
rosa_wichuraiana	Rw3G011960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1697
Acc36I	ACCTGC	2 cut(s)	1595, 1751
AccB1I	GGYRCC	1 cut(s)	1109
AccB7I	CCANNNNNTGG	2 cut(s)	662, 849
AccI	GTMKAC	1 cut(s)	1130
AccII	CGCG	1 cut(s)	45
AciI	CCGC	8 cut(s)	45, 417, 446, 749, 975, 1412, 1538, 1772
AclI	AACGTT	1 cut(s)	1607
AclWI	GGATC	6 cut(s)	36, 966, 979, 1336, 1425, 1438
AcoI	YGGCCR	2 cut(s)	664, 688
AcsI	RAATTY	4 cut(s)	424, 606, 807, 1208
AcuI	CTGAAG	1 cut(s)	150
AfaI	GTAC	2 cut(s)	215, 483
AfiI	CCNNNNNNNGG	5 cut(s)	44, 662, 849, 1406, 1836
AgsI	TTSAA	4 cut(s)	797, 857, 1221, 1344
AjiI	CACGTC	1 cut(s)	1523
AjnI	CCWGG	4 cut(s)	637, 666, 1465, 1701
AjuI	GAANNNNNNNTTGG	2 cut(s)	942, 974
AluBI	AGCT	9 cut(s)	19, 192, 285, 340, 395, 479, 1319, 1395, 1745
AluI	AGCT	9 cut(s)	19, 192, 285, 340, 395, 479, 1319, 1395, 1745
Alw21I	GWGCWC	1 cut(s)	166
Alw26I	GTCTC	4 cut(s)	1161, 1185, 1526, 1624
Alw44I	GTGCAC	1 cut(s)	162
AlwI	GGATC	6 cut(s)	36, 966, 979, 1336, 1425, 1438
AoxI	GGCC	5 cut(s)	182, 272, 664, 688, 915
ApaI	GGGCCC	1 cut(s)	276
ApaLI	GTGCAC	1 cut(s)	162
ApeKI	GCWGC	3 cut(s)	392, 671, 1742
ApoI	RAATTY	4 cut(s)	424, 606, 807, 1208
AseI	ATTAAT	1 cut(s)	614
Asp700I	GAANNNNTTC	1 cut(s)	1308
AspLEI	GCGC	1 cut(s)	45
AspS9I	GGNCC	5 cut(s)	35, 272, 273, 1699, 1763
AsuC2I	CCSGG	1 cut(s)	991
AsuHPI	GGTGA	4 cut(s)	1426, 1748, 1763, 1796
AsuII	TTCGAA	1 cut(s)	1612
AvaII	GGWCC	3 cut(s)	35, 1699, 1763
AxyI	CCTNAGG	1 cut(s)	144
BaeGI	GKGCMC	2 cut(s)	166, 276
BalI	TGGCCA	1 cut(s)	666
BamHI	GGATCC	2 cut(s)	971, 1430
BanI	GGYRCC	1 cut(s)	1109
BanII	GRGCYC	1 cut(s)	276
BbsI	GAAGAC	2 cut(s)	285, 1695
Bbv12I	GWGCWC	1 cut(s)	166
BbvI	GCAGC	3 cut(s)	404, 658, 1754
BceAI	ACGGC	4 cut(s)	675, 1551, 1615, 1888
BciT130I	CCWGG	4 cut(s)	639, 668, 1467, 1703
BcnI	CCSGG	1 cut(s)	991
BcoDI	GTCTC	4 cut(s)	1161, 1185, 1526, 1624
BfaI	CTAG	3 cut(s)	1364, 1526, 1661
BfmI	CTRYAG	1 cut(s)	1314
BfuAI	ACCTGC	2 cut(s)	1595, 1751
BisI	GCNGC	5 cut(s)	393, 672, 750, 1539, 1743
BlsI	GCNGC	5 cut(s)	394, 673, 751, 1540, 1744
Bme1390I	CCNGG	5 cut(s)	639, 668, 991, 1467, 1703
Bme18I	GGWCC	3 cut(s)	35, 1699, 1763
BmgBI	CACGTC	1 cut(s)	1523
BmgT120I	GGNCC	5 cut(s)	35, 272, 273, 1699, 1763
BmiI	GGNNCC	5 cut(s)	274, 973, 1111, 1432, 1585
BmrFI	CCNGG	5 cut(s)	639, 668, 991, 1467, 1703
BmrI	ACTGGG	2 cut(s)	270, 1143
BmsI	GCATC	3 cut(s)	911, 1677, 1729
BmuI	ACTGGG	2 cut(s)	270, 1143
BpiI	GAAGAC	2 cut(s)	285, 1695
Bpu14I	TTCGAA	1 cut(s)	1612
BpuEI	CTTGAG	1 cut(s)	1610
BpuMI	CCSGG	1 cut(s)	991
Bsa29I	ATCGAT	3 cut(s)	207, 905, 1892
BsaBI	GATNNNNATC	1 cut(s)	27
BsaI	GGTCTC	2 cut(s)	1185, 1624
BsaJI	CCNNGG	2 cut(s)	1465, 1466
BsaWI	WCCGGW	1 cut(s)	37
BsaXI	ACNNNNNCTCC	2 cut(s)	1545, 1575
Bsc4I	CCNNNNNNNGG	5 cut(s)	44, 662, 849, 1406, 1836
Bse118I	RCCGGY	2 cut(s)	1282, 1733
Bse1I	ACTGG	5 cut(s)	200, 276, 607, 691, 1138
Bse21I	CCTNAGG	1 cut(s)	144
Bse3DI	GCAATG	2 cut(s)	150, 1449
Bse8I	GATNNNNATC	1 cut(s)	27
BseBI	CCWGG	4 cut(s)	639, 668, 1467, 1703
BseCI	ATCGAT	3 cut(s)	207, 905, 1892
BseDI	CCNNGG	2 cut(s)	1465, 1466
BseGI	GGATG	6 cut(s)	28, 516, 1329, 1482, 1657, 1847
BseJI	GATNNNNATC	1 cut(s)	27
BseLI	CCNNNNNNNGG	5 cut(s)	44, 662, 849, 1406, 1836
BseMI	GCAATG	2 cut(s)	150, 1449
BseMII	CTCAG	6 cut(s)	135, 200, 355, 897, 1196, 1283
BseNI	ACTGG	5 cut(s)	200, 276, 607, 691, 1138
BseRI	GAGGAG	4 cut(s)	222, 906, 1544, 1794
BseSI	GKGCMC	2 cut(s)	166, 276
BseXI	GCAGC	3 cut(s)	404, 658, 1754
BseYI	CCCAGC	1 cut(s)	1836
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	5 cut(s)	184, 274, 666, 690, 917
BshNI	GGYRCC	1 cut(s)	1109
BshVI	ATCGAT	3 cut(s)	207, 905, 1892
BsiHKAI	GWGCWC	1 cut(s)	166
BsiSI	CCGG	4 cut(s)	38, 990, 1283, 1734
BslFI	GGGAC	2 cut(s)	62, 528
BslI	CCNNNNNNNGG	5 cut(s)	44, 662, 849, 1406, 1836
BsmAI	GTCTC	4 cut(s)	1161, 1185, 1526, 1624
BsmBI	CGTCTC	1 cut(s)	1526
BsmFI	GGGAC	2 cut(s)	62, 528
BsnI	GGCC	5 cut(s)	184, 274, 666, 690, 917
Bso31I	GGTCTC	2 cut(s)	1185, 1624
Bsp119I	TTCGAA	1 cut(s)	1612
Bsp120I	GGGCCC	1 cut(s)	272
Bsp1286I	GDGCHC	2 cut(s)	166, 276
Bsp1407I	TGTACA	1 cut(s)	213
Bsp143I	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
BspACI	CCGC	8 cut(s)	45, 417, 446, 749, 975, 1412, 1538, 1772
BspANI	GGCC	5 cut(s)	184, 274, 666, 690, 917
BspCNI	CTCAG	6 cut(s)	136, 199, 354, 896, 1195, 1284
BspDI	ATCGAT	3 cut(s)	207, 905, 1892
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	2 cut(s)	225, 802
BspLI	GGNNCC	5 cut(s)	274, 973, 1111, 1432, 1585
BspMI	ACCTGC	2 cut(s)	1595, 1751
BspPI	GGATC	6 cut(s)	36, 966, 979, 1336, 1425, 1438
BspT104I	TTCGAA	1 cut(s)	1612
BspT107I	GGYRCC	1 cut(s)	1109
BspTNI	GGTCTC	2 cut(s)	1185, 1624
BsrDI	GCAATG	2 cut(s)	150, 1449
BsrFI	RCCGGY	2 cut(s)	1282, 1733
BsrGI	TGTACA	1 cut(s)	213
BsrI	ACTGG	5 cut(s)	200, 276, 607, 691, 1138
BssAI	RCCGGY	2 cut(s)	1282, 1733
BssECI	CCNNGG	2 cut(s)	1465, 1466
BssMI	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
BssNAI	GTATAC	1 cut(s)	1131
Bst1107I	GTATAC	1 cut(s)	1131
Bst2UI	CCWGG	4 cut(s)	639, 668, 1467, 1703
Bst4CI	ACNGT	3 cut(s)	847, 968, 1360
Bst6I	CTCTTC	2 cut(s)	69, 1782
BstAUI	TGTACA	1 cut(s)	213
BstBI	TTCGAA	1 cut(s)	1612
BstC8I	GCNNGC	1 cut(s)	390
BstDEI	CTNAG	8 cut(s)	144, 186, 341, 745, 863, 883, 1182, 1292
BstF5I	GGATG	6 cut(s)	28, 516, 1329, 1482, 1657, 1847
BstFNI	CGCG	1 cut(s)	45
BstHHI	GCGC	1 cut(s)	45
BstKTI	GATC	9 cut(s)	31, 266, 974, 1176, 1331, 1433, 1573, 1723, 1810
BstMAI	GTCTC	4 cut(s)	1161, 1185, 1526, 1624
BstMBI	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
BstMWI	GCNNNNNNNGC	7 cut(s)	161, 365, 687, 821, 1418, 1547, 1739
BstNI	CCWGG	4 cut(s)	639, 668, 1467, 1703
BstNSI	RCATGY	1 cut(s)	1201
BstSCI	CCNGG	5 cut(s)	637, 666, 989, 1465, 1701
BstSFI	CTRYAG	1 cut(s)	1314
BstSLI	GKGCMC	2 cut(s)	166, 276
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	3 cut(s)	404, 658, 1754
BstV2I	GAAGAC	2 cut(s)	285, 1695
BstX2I	RGATCY	4 cut(s)	28, 971, 1328, 1430
BstYI	RGATCY	4 cut(s)	28, 971, 1328, 1430
BstZ17I	GTATAC	1 cut(s)	1131
Bsu15I	ATCGAT	3 cut(s)	207, 905, 1892
Bsu36I	CCTNAGG	1 cut(s)	144
BsuRI	GGCC	5 cut(s)	184, 274, 666, 690, 917
BsuTUI	ATCGAT	3 cut(s)	207, 905, 1892
BtgZI	GCGATG	1 cut(s)	634
BtrI	CACGTC	1 cut(s)	1523
BtsCI	GGATG	6 cut(s)	28, 516, 1329, 1482, 1657, 1847
BtsIMutI	CAGTG	5 cut(s)	349, 843, 973, 1047, 1678
BveI	ACCTGC	2 cut(s)	1595, 1751
Cac8I	GCNNGC	1 cut(s)	390
CciI	TCATGA	2 cut(s)	225, 802
CfoI	GCGC	1 cut(s)	45
Cfr10I	RCCGGY	2 cut(s)	1282, 1733
Cfr13I	GGNCC	5 cut(s)	35, 272, 273, 1699, 1763
ClaI	ATCGAT	3 cut(s)	207, 905, 1892
Csp6I	GTAC	2 cut(s)	214, 482
CspCI	CAANNNNNGTGG	4 cut(s)	1431, 1466, 1755, 1790
CviAII	CATG	6 cut(s)	180, 226, 803, 1126, 1198, 1577
CviQI	GTAC	2 cut(s)	214, 482
DdeI	CTNAG	8 cut(s)	144, 186, 341, 745, 863, 883, 1182, 1292
DpnI	GATC	9 cut(s)	30, 265, 973, 1175, 1330, 1432, 1572, 1722, 1809
DpnII	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
DrdI	GACNNNNNNGTC	1 cut(s)	1697
DseDI	GACNNNNNNGTC	1 cut(s)	1697
EaeI	YGGCCR	2 cut(s)	664, 688
Eam1104I	CTCTTC	2 cut(s)	69, 1782
EarI	CTCTTC	2 cut(s)	69, 1782
EciI	GGCGGA	1 cut(s)	964
Eco24I	GRGCYC	1 cut(s)	276
Eco31I	GGTCTC	2 cut(s)	1185, 1624
Eco47I	GGWCC	3 cut(s)	35, 1699, 1763
Eco57I	CTGAAG	1 cut(s)	150
Eco81I	CCTNAGG	1 cut(s)	144
EcoO109I	RGGNCCY	1 cut(s)	272
EcoRII	CCWGG	4 cut(s)	637, 666, 1465, 1701
EcoT22I	ATGCAT	1 cut(s)	181
EcoT38I	GRGCYC	1 cut(s)	276
Esp3I	CGTCTC	1 cut(s)	1526
FaeI	CATG	6 cut(s)	183, 229, 806, 1129, 1201, 1580
FalI	AAGNNNNNCTT	2 cut(s)	372, 404
FaqI	GGGAC	2 cut(s)	62, 528
FatI	CATG	6 cut(s)	179, 225, 802, 1125, 1197, 1576
FauI	CCCGC	1 cut(s)	38
FauNDI	CATATG	1 cut(s)	532
FblI	GTMKAC	1 cut(s)	1130
Fnu4HI	GCNGC	5 cut(s)	393, 672, 750, 1539, 1743
FokI	GGATG	6 cut(s)	35, 523, 1336, 1469, 1664, 1854
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	5 cut(s)	393, 672, 750, 1539, 1743
FspBI	CTAG	3 cut(s)	1364, 1526, 1661
GlaI	GCGC	1 cut(s)	44
GluI	GCNGC	5 cut(s)	393, 672, 750, 1539, 1743
GsaI	CCCAGC	1 cut(s)	1840
HaeIII	GGCC	5 cut(s)	184, 274, 666, 690, 917
HapII	CCGG	4 cut(s)	38, 990, 1283, 1734
HhaI	GCGC	1 cut(s)	45
Hin1II	CATG	6 cut(s)	183, 229, 806, 1129, 1201, 1580
Hin6I	GCGC	1 cut(s)	43
HinP1I	GCGC	1 cut(s)	43
HinfI	GANTC	7 cut(s)	125, 229, 492, 642, 786, 907, 1169
HpaII	CCGG	4 cut(s)	38, 990, 1283, 1734
HphI	GGTGA	4 cut(s)	1426, 1748, 1763, 1796
Hpy166II	GTNNAC	6 cut(s)	164, 216, 946, 1131, 1188, 1249
Hpy188I	TCNGA	7 cut(s)	112, 130, 189, 364, 647, 1293, 1812
Hpy8I	GTNNAC	6 cut(s)	164, 216, 946, 1131, 1188, 1249
Hpy99I	CGWCG	3 cut(s)	1569, 1601, 1874
HpyAV	CCTTC	6 cut(s)	117, 246, 251, 255, 377, 539
HpyCH4III	ACNGT	3 cut(s)	847, 968, 1360
HpyCH4IV	ACGT	2 cut(s)	1522, 1607
HpyF10VI	GCNNNNNNNGC	7 cut(s)	161, 365, 687, 821, 1418, 1547, 1739
HpyF3I	CTNAG	8 cut(s)	144, 186, 341, 745, 863, 883, 1182, 1292
HpySE526I	ACGT	2 cut(s)	1522, 1607
Hsp92II	CATG	6 cut(s)	183, 229, 806, 1129, 1201, 1580
HspAI	GCGC	1 cut(s)	43
Kzo9I	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
LmnI	GCTCC	2 cut(s)	40, 290
Lsp1109I	GCAGC	3 cut(s)	404, 658, 1754
LweI	GCATC	3 cut(s)	911, 1677, 1729
MaeI	CTAG	3 cut(s)	1364, 1526, 1661
MaeII	ACGT	2 cut(s)	1522, 1607
MaeIII	GTNAC	2 cut(s)	1000, 1515
MalI	GATC	9 cut(s)	30, 265, 973, 1175, 1330, 1432, 1572, 1722, 1809
MboI	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
MfeI	CAATTG	3 cut(s)	1005, 1242, 1694
MflI	RGATCY	4 cut(s)	28, 971, 1328, 1430
MhlI	GDGCHC	2 cut(s)	166, 276
MlsI	TGGCCA	1 cut(s)	666
MluNI	TGGCCA	1 cut(s)	666
MlyI	GAGTC	3 cut(s)	223, 636, 1163
MmeI	TCCRAC	2 cut(s)	868, 1561
Mox20I	TGGCCA	1 cut(s)	666
Mph1103I	ATGCAT	1 cut(s)	181
MroXI	GAANNNNTTC	1 cut(s)	1308
MscI	TGGCCA	1 cut(s)	666
MseI	TTAA	8 cut(s)	62, 303, 614, 695, 725, 980, 1491, 1502
MslI	CAYNNNNRTG	3 cut(s)	209, 966, 1064
Msp20I	TGGCCA	1 cut(s)	666
MspI	CCGG	4 cut(s)	38, 990, 1283, 1734
MspR9I	CCNGG	5 cut(s)	639, 668, 991, 1467, 1703
MunI	CAATTG	3 cut(s)	1005, 1242, 1694
MvaI	CCWGG	4 cut(s)	639, 668, 1467, 1703
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	7 cut(s)	161, 365, 687, 821, 1418, 1547, 1739
NciI	CCSGG	1 cut(s)	991
NdeI	CATATG	1 cut(s)	532
NdeII	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
NlaIII	CATG	6 cut(s)	183, 229, 806, 1129, 1201, 1580
NlaIV	GGNNCC	5 cut(s)	274, 973, 1111, 1432, 1585
NmuCI	GTSAC	1 cut(s)	1000
NsiI	ATGCAT	1 cut(s)	181
NspI	RCATGY	1 cut(s)	1201
NspV	TTCGAA	1 cut(s)	1612
PagI	TCATGA	2 cut(s)	225, 802
PasI	CCCWGGG	1 cut(s)	1466
PcsI	WCGNNNNNNNCGW	1 cut(s)	1541
PdmI	GAANNNNTTC	1 cut(s)	1308
PfeI	GAWTC	4 cut(s)	125, 492, 786, 907
PflMI	CCANNNNNTGG	2 cut(s)	662, 849
PfoI	TCCNGGA	2 cut(s)	637, 1701
PkrI	GCNGC	5 cut(s)	394, 673, 751, 1540, 1744
PleI	GAGTC	3 cut(s)	223, 636, 1163
PpsI	GAGTC	3 cut(s)	223, 636, 1163
PshBI	ATTAAT	1 cut(s)	614
Psp1406I	AACGTT	1 cut(s)	1607
Psp6I	CCWGG	4 cut(s)	637, 666, 1465, 1701
PspFI	CCCAGC	1 cut(s)	1836
PspGI	CCWGG	4 cut(s)	637, 666, 1465, 1701
PspN4I	GGNNCC	5 cut(s)	274, 973, 1111, 1432, 1585
PspOMI	GGGCCC	1 cut(s)	272
PspPI	GGNCC	5 cut(s)	35, 272, 273, 1699, 1763
PsuI	RGATCY	4 cut(s)	28, 971, 1328, 1430
RsaI	GTAC	2 cut(s)	215, 483
RsaNI	GTAC	2 cut(s)	214, 482
RseI	CAYNNNNRTG	3 cut(s)	209, 966, 1064
SaqAI	TTAA	8 cut(s)	62, 303, 614, 695, 725, 980, 1491, 1502
SatI	GCNGC	5 cut(s)	393, 672, 750, 1539, 1743
Sau3AI	GATC	9 cut(s)	28, 263, 971, 1173, 1328, 1430, 1570, 1720, 1807
Sau96I	GGNCC	5 cut(s)	35, 272, 273, 1699, 1763
SchI	GAGTC	3 cut(s)	223, 636, 1163
ScrFI	CCNGG	5 cut(s)	639, 668, 991, 1467, 1703
SduI	GDGCHC	2 cut(s)	166, 276
SfaNI	GCATC	3 cut(s)	911, 1677, 1729
SfcI	CTRYAG	1 cut(s)	1314
SfuI	TTCGAA	1 cut(s)	1612
SinI	GGWCC	3 cut(s)	35, 1699, 1763
SmiMI	CAYNNNNRTG	3 cut(s)	209, 966, 1064
SmlI	CTYRAG	1 cut(s)	1625
SmoI	CTYRAG	1 cut(s)	1625
SsiI	CCGC	8 cut(s)	45, 417, 446, 749, 975, 1412, 1538, 1772
SspI	AATATT	1 cut(s)	756
SspMI	CTAG	3 cut(s)	1364, 1526, 1661
StyD4I	CCNGG	5 cut(s)	637, 666, 989, 1465, 1701
TaaI	ACNGT	3 cut(s)	847, 968, 1360
TaiI	ACGT	2 cut(s)	1525, 1610
TaqI	TCGA	9 cut(s)	207, 683, 905, 1172, 1567, 1596, 1612, 1869, 1892
TatI	WGTACW	2 cut(s)	213, 481
TauI	GCSGC	2 cut(s)	752, 1541
TfiI	GAWTC	4 cut(s)	125, 492, 786, 907
Tru1I	TTAA	8 cut(s)	62, 303, 614, 695, 725, 980, 1491, 1502
Tru9I	TTAA	8 cut(s)	62, 303, 614, 695, 725, 980, 1491, 1502
TscAI	CASTG	5 cut(s)	349, 850, 973, 1047, 1678
TseFI	GTSAC	1 cut(s)	1000
TseI	GCWGC	3 cut(s)	392, 671, 1742
Tsp45I	GTSAC	1 cut(s)	1000
TspDTI	ATGAA	8 cut(s)	87, 387, 456, 819, 950, 1114, 1743, 1878
TspGWI	ACGGA	2 cut(s)	1389, 1553
TspRI	CASTG	5 cut(s)	349, 850, 973, 1047, 1678
Van91I	CCANNNNNTGG	2 cut(s)	662, 849
VneI	GTGCAC	1 cut(s)	162
VpaK11BI	GGWCC	3 cut(s)	35, 1699, 1763
VspI	ATTAAT	1 cut(s)	614
XapI	RAATTY	4 cut(s)	424, 606, 807, 1208
XbaI	TCTAGA	2 cut(s)	1525, 1660
XceI	RCATGY	1 cut(s)	1201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	674
XmiI	GTMKAC	1 cut(s)	1130
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	3 cut(s)	1364, 1526, 1661
Zsp2I	ATGCAT	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.