Rmu_sc0000350.1_g000014

Amino acid transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000350.1
Physical Location & Seq
Forward (+)
41101 .. 44404
3304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000350.1_g000014.1.cds

Sequence Viewer

Length: 1611 bp
atgagcagttggacgaagctggatgaggatcttggaccggagcgcggggacgatgattttttaacagatgatgaagagaaccaagcacacagaaacaactatgagccttccgaagccgaaactgaatctgaagtaggcagacctgagggcattgccattagtgcacctaacaataatgcatggcctcagagctactggcagtccatcgatatgtacaccaatgtcatgactcctccttcccttccttcccttacttttatgcgatcaagagggcccagtttcagctccttgtcttcgtttgttaaggggcaacaagcacctgatgataattcttcacagctcagtagcaaattacttgcttccgaagcaagtttagaaaaagaagggcttgcagcatcatctcccccaactctctccgcaaaaaattctgtctgtgaattgccaccgccaaaggaacatagttgttcattttcacaagctgtactcaatggaatcaatgtcttgtgtgggatgggacttattacaacaccatatgcaataaaagaaggagggtggttgagcctcattttacttgcattgtttggtgtgatatgttgctatactggaattttattaatgcgatgtttagaaagttgtcccggactccgaacctatccagatattggccaggctgcttttggctctactggccgtttaattctatctggtgcttgtgtggagtttttgacgatgatgggcgataacttagcggcaatattcccaaacacccacatagcatttgcaggaatccatcttcaaagtcatgaaatttttgccatcacagcgactcttgtagttcttcccactgtatggcttcaaaatcttagtttgctctcttacctctcagttggaggagtaggtgcatcgattctggtggcctttttattgctgtgggttggggctgtgaaccaagttggctttcatcacagtggatccgccttaaacctttccggtttgtctgtcacaattggtatatatggtttcggctacgctggtcattcagtgttcccaaatatctacacatctatgagaaaaccatctcaatttccagcagttctactaacctgtggtgccttttgcttcttcatgtatactggggtagcaatatgtggctatctaatgtttggagactcggtgaggtctcagttcactctaaacatgcccgaagaatttgttgcttcaaaaattgcagtctggacaacaattgtgaacccgatgacaaagtatgccctcacaataacgcccgttgctctgagtttagaggaactctttcctgtagcttggatgggatcacatttggcttcaatccttacaagaacagttctagttctatcaactttggtcgtagcgttgagctttccattctttggtgcggtgatggcattgatgggatccttacttgcaatgttagtggctattatcttcccaggggtctgttatctcatcctacttaaaggtagattaactaagtcgcagattacaacttgcgttttcgttataatgctgggggtgttgtgctctattattggcacatattcatcaattacaaaaatagctgaacaaatggactaa

Protein Analysis

536

Amino Acids

57.63

Weight (kDa)

5.15

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011681)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1538
AccB1I GGYRCC 1 cut(s) 1109
AccB7I CCANNNNNTGG 3 cut(s) 662, 849, 1406
AccI GTMKAC 1 cut(s) 1130
AccII CGCG 1 cut(s) 45
AciI CCGC 6 cut(s) 45, 417, 446, 749, 975, 1412
AclWI GGATC 6 cut(s) 36, 966, 979, 1336, 1425, 1438
AcoI YGGCCR 2 cut(s) 664, 688
AcsI RAATTY 4 cut(s) 424, 606, 807, 1208
AcuI CTGAAG 1 cut(s) 150
AfaI GTAC 2 cut(s) 215, 483
AfiI CCNNNNNNNGG 4 cut(s) 44, 662, 849, 1406
AgsI TTSAA 4 cut(s) 797, 857, 1221, 1344
AjnI CCWGG 2 cut(s) 666, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 942, 974
AluBI AGCT 8 cut(s) 19, 192, 285, 340, 479, 1319, 1395, 1595
AluI AGCT 8 cut(s) 19, 192, 285, 340, 479, 1319, 1395, 1595
Alw21I GWGCWC 2 cut(s) 166, 1559
Alw26I GTCTC 2 cut(s) 1161, 1185
Alw44I GTGCAC 1 cut(s) 162
AlwI GGATC 6 cut(s) 36, 966, 979, 1336, 1425, 1438
AoxI GGCC 5 cut(s) 182, 272, 664, 688, 915
ApaI GGGCCC 1 cut(s) 276
ApaLI GTGCAC 1 cut(s) 162
ApeKI GCWGC 2 cut(s) 392, 671
ApoI RAATTY 4 cut(s) 424, 606, 807, 1208
AseI ATTAAT 1 cut(s) 614
Asp700I GAANNNNTTC 1 cut(s) 1308
AspLEI GCGC 1 cut(s) 45
AspS9I GGNCC 3 cut(s) 35, 272, 273
AsuC2I CCSGG 1 cut(s) 639
AsuHPI GGTGA 2 cut(s) 1186, 1426
AvaII GGWCC 1 cut(s) 35
AxyI CCTNAGG 1 cut(s) 144
BaeGI GKGCMC 2 cut(s) 166, 276
BalI TGGCCA 1 cut(s) 666
BamHI GGATCC 2 cut(s) 971, 1430
BanI GGYRCC 1 cut(s) 1109
BanII GRGCYC 1 cut(s) 276
BbsI GAAGAC 1 cut(s) 285
Bbv12I GWGCWC 2 cut(s) 166, 1559
BbvI GCAGC 2 cut(s) 404, 658
BccI CCATC 9 cut(s) 212, 505, 727, 798, 824, 1084, 1318, 1411, 1420
BceAI ACGGC 1 cut(s) 675
BciT130I CCWGG 2 cut(s) 668, 1467
BcnI CCSGG 1 cut(s) 639
BcoDI GTCTC 2 cut(s) 1161, 1185
BfaI CTAG 1 cut(s) 1364
BfmI CTRYAG 1 cut(s) 1314
BisI GCNGC 3 cut(s) 393, 672, 750
BlsI GCNGC 3 cut(s) 394, 673, 751
Bme1390I CCNGG 3 cut(s) 639, 668, 1467
Bme18I GGWCC 1 cut(s) 35
BmgT120I GGNCC 3 cut(s) 35, 272, 273
BmiI GGNNCC 4 cut(s) 274, 973, 1111, 1432
BmrFI CCNGG 3 cut(s) 639, 668, 1467
BmrI ACTGGG 2 cut(s) 270, 1143
BmsI GCATC 2 cut(s) 404, 911
BmuI ACTGGG 2 cut(s) 270, 1143
BpiI GAAGAC 1 cut(s) 285
BpuMI CCSGG 1 cut(s) 639
Bsa29I ATCGAT 2 cut(s) 207, 905
BsaBI GATNNNNATC 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 1185
BsaJI CCNNGG 2 cut(s) 1465, 1466
BsaWI WCCGGW 2 cut(s) 37, 989
BsaXI ACNNNNNCTCC 2 cut(s) 1158, 1188
Bsc4I CCNNNNNNNGG 4 cut(s) 44, 662, 849, 1406
Bse1I ACTGG 5 cut(s) 200, 276, 607, 691, 1138
Bse21I CCTNAGG 1 cut(s) 144
Bse3DI GCAATG 2 cut(s) 150, 1449
Bse8I GATNNNNATC 1 cut(s) 27
BseBI CCWGG 2 cut(s) 668, 1467
BseCI ATCGAT 2 cut(s) 207, 905
BseDI CCNNGG 2 cut(s) 1465, 1466
BseGI GGATG 4 cut(s) 28, 516, 1329, 1482
BseJI GATNNNNATC 1 cut(s) 27
BseLI CCNNNNNNNGG 4 cut(s) 44, 662, 849, 1406
BseMI GCAATG 2 cut(s) 150, 1449
BseMII CTCAG 6 cut(s) 135, 200, 355, 897, 1196, 1283
BseNI ACTGG 5 cut(s) 200, 276, 607, 691, 1138
BseRI GAGGAG 2 cut(s) 222, 906
BseSI GKGCMC 2 cut(s) 166, 276
BseXI GCAGC 2 cut(s) 404, 658
BseYI CCCAGC 1 cut(s) 1543
Bsh1236I CGCG 1 cut(s) 45
BshFI GGCC 5 cut(s) 184, 274, 666, 690, 917
BshNI GGYRCC 1 cut(s) 1109
BshVI ATCGAT 2 cut(s) 207, 905
BsiHKAI GWGCWC 2 cut(s) 166, 1559
BsiSI CCGG 3 cut(s) 38, 639, 990
BslFI GGGAC 3 cut(s) 62, 528, 621
BslI CCNNNNNNNGG 4 cut(s) 44, 662, 849, 1406
BsmAI GTCTC 2 cut(s) 1161, 1185
BsmFI GGGAC 3 cut(s) 62, 528, 621
BsnI GGCC 5 cut(s) 184, 274, 666, 690, 917
Bso31I GGTCTC 1 cut(s) 1185
Bsp120I GGGCCC 1 cut(s) 272
Bsp1286I GDGCHC 3 cut(s) 166, 276, 1559
Bsp1407I TGTACA 1 cut(s) 213
Bsp143I GATC 5 cut(s) 28, 263, 971, 1328, 1430
BspACI CCGC 6 cut(s) 45, 417, 446, 749, 975, 1412
BspANI GGCC 5 cut(s) 184, 274, 666, 690, 917
BspCNI CTCAG 6 cut(s) 136, 199, 354, 896, 1195, 1284
BspDI ATCGAT 2 cut(s) 207, 905
BspFNI CGCG 1 cut(s) 45
BspHI TCATGA 2 cut(s) 225, 802
BspLI GGNNCC 4 cut(s) 274, 973, 1111, 1432
BspPI GGATC 6 cut(s) 36, 966, 979, 1336, 1425, 1438
BspT107I GGYRCC 1 cut(s) 1109
BspTNI GGTCTC 1 cut(s) 1185
BsrDI GCAATG 2 cut(s) 150, 1449
BsrGI TGTACA 1 cut(s) 213
BsrI ACTGG 5 cut(s) 200, 276, 607, 691, 1138
BssECI CCNNGG 2 cut(s) 1465, 1466
BssMI GATC 5 cut(s) 28, 263, 971, 1328, 1430
BssNAI GTATAC 1 cut(s) 1131
Bst1107I GTATAC 1 cut(s) 1131
Bst2UI CCWGG 2 cut(s) 668, 1467
Bst4CI ACNGT 3 cut(s) 847, 968, 1360
Bst6I CTCTTC 1 cut(s) 69
BstAUI TGTACA 1 cut(s) 213
BstC8I GCNNGC 1 cut(s) 390
BstDEI CTNAG 9 cut(s) 144, 186, 341, 745, 863, 883, 1182, 1292, 1506
BstF5I GGATG 4 cut(s) 28, 516, 1329, 1482
BstFNI CGCG 1 cut(s) 45
BstHHI GCGC 1 cut(s) 45
BstKTI GATC 5 cut(s) 31, 266, 974, 1331, 1433
BstMAI GTCTC 2 cut(s) 1161, 1185
BstMBI GATC 5 cut(s) 28, 263, 971, 1328, 1430
BstMWI GCNNNNNNNGC 5 cut(s) 161, 365, 687, 821, 1418
BstNI CCWGG 2 cut(s) 668, 1467
BstNSI RCATGY 1 cut(s) 1201
BstSCI CCNGG 3 cut(s) 637, 666, 1465
BstSFI CTRYAG 1 cut(s) 1314
BstSLI GKGCMC 2 cut(s) 166, 276
BstUI CGCG 1 cut(s) 45
BstV1I GCAGC 2 cut(s) 404, 658
BstV2I GAAGAC 1 cut(s) 285
BstX2I RGATCY 3 cut(s) 28, 971, 1430
BstYI RGATCY 3 cut(s) 28, 971, 1430
BstZ17I GTATAC 1 cut(s) 1131
Bsu15I ATCGAT 2 cut(s) 207, 905
Bsu36I CCTNAGG 1 cut(s) 144
BsuRI GGCC 5 cut(s) 184, 274, 666, 690, 917
BsuTUI ATCGAT 2 cut(s) 207, 905
BtgZI GCGATG 1 cut(s) 634
BtsCI GGATG 4 cut(s) 28, 516, 1329, 1482
BtsIMutI CAGTG 3 cut(s) 843, 973, 1047
Cac8I GCNNGC 1 cut(s) 390
CciI TCATGA 2 cut(s) 225, 802
CfoI GCGC 1 cut(s) 45
Cfr13I GGNCC 3 cut(s) 35, 272, 273
ClaI ATCGAT 2 cut(s) 207, 905
Csp6I GTAC 2 cut(s) 214, 482
CspCI CAANNNNNGTGG 2 cut(s) 1431, 1466
CviAII CATG 5 cut(s) 180, 226, 803, 1126, 1198
CviQI GTAC 2 cut(s) 214, 482
DdeI CTNAG 9 cut(s) 144, 186, 341, 745, 863, 883, 1182, 1292, 1506
DpnI GATC 5 cut(s) 30, 265, 973, 1330, 1432
DpnII GATC 5 cut(s) 28, 263, 971, 1328, 1430
EaeI YGGCCR 2 cut(s) 664, 688
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
EciI GGCGGA 1 cut(s) 964
Eco24I GRGCYC 1 cut(s) 276
Eco31I GGTCTC 1 cut(s) 1185
Eco47I GGWCC 1 cut(s) 35
Eco57I CTGAAG 1 cut(s) 150
Eco81I CCTNAGG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 272
EcoRII CCWGG 2 cut(s) 666, 1465
EcoT22I ATGCAT 1 cut(s) 181
EcoT38I GRGCYC 1 cut(s) 276
FaeI CATG 5 cut(s) 183, 229, 806, 1129, 1201
FalI AAGNNNNNCTT 2 cut(s) 372, 404
FaqI GGGAC 3 cut(s) 62, 528, 621
FatI CATG 5 cut(s) 179, 225, 802, 1125, 1197
FauI CCCGC 1 cut(s) 38
FauNDI CATATG 1 cut(s) 532
FblI GTMKAC 1 cut(s) 1130
Fnu4HI GCNGC 3 cut(s) 393, 672, 750
FokI GGATG 4 cut(s) 35, 523, 1336, 1469
FriOI GRGCYC 1 cut(s) 276
Fsp4HI GCNGC 3 cut(s) 393, 672, 750
FspBI CTAG 1 cut(s) 1364
GlaI GCGC 1 cut(s) 44
GluI GCNGC 3 cut(s) 393, 672, 750
GsaI CCCAGC 1 cut(s) 1547
HaeIII GGCC 5 cut(s) 184, 274, 666, 690, 917
HapII CCGG 3 cut(s) 38, 639, 990
HhaI GCGC 1 cut(s) 45
Hin1II CATG 5 cut(s) 183, 229, 806, 1129, 1201
Hin6I GCGC 1 cut(s) 43
HinP1I GCGC 1 cut(s) 43
HinfI GANTC 8 cut(s) 125, 229, 492, 642, 786, 826, 907, 1169
HpaII CCGG 3 cut(s) 38, 639, 990
HphI GGTGA 2 cut(s) 1186, 1426
Hpy166II GTNNAC 6 cut(s) 164, 216, 946, 1131, 1188, 1249
Hpy188I TCNGA 6 cut(s) 112, 130, 189, 364, 647, 1293
Hpy188III TCNNGA 5 cut(s) 226, 267, 656, 803, 1234
Hpy8I GTNNAC 6 cut(s) 164, 216, 946, 1131, 1188, 1249
HpyAV CCTTC 6 cut(s) 117, 246, 251, 255, 377, 539
HpyCH4III ACNGT 3 cut(s) 847, 968, 1360
HpyCH4V TGCA 9 cut(s) 164, 179, 392, 536, 575, 782, 902, 1229, 1442
HpyF10VI GCNNNNNNNGC 5 cut(s) 161, 365, 687, 821, 1418
HpyF3I CTNAG 9 cut(s) 144, 186, 341, 745, 863, 883, 1182, 1292, 1506
Hsp92II CATG 5 cut(s) 183, 229, 806, 1129, 1201
HspAI GCGC 1 cut(s) 43
Kzo9I GATC 5 cut(s) 28, 263, 971, 1328, 1430
LmnI GCTCC 2 cut(s) 40, 290
Lsp1109I GCAGC 2 cut(s) 404, 658
LweI GCATC 2 cut(s) 404, 911
MaeI CTAG 1 cut(s) 1364
MaeIII GTNAC 1 cut(s) 1000
MalI GATC 5 cut(s) 30, 265, 973, 1330, 1432
MboI GATC 5 cut(s) 28, 263, 971, 1328, 1430
MboII GAAGA 8 cut(s) 86, 285, 324, 785, 830, 1114, 1217, 1453
MfeI CAATTG 2 cut(s) 1005, 1242
MflI RGATCY 3 cut(s) 28, 971, 1430
MhlI GDGCHC 3 cut(s) 166, 276, 1559
MlsI TGGCCA 1 cut(s) 666
MluNI TGGCCA 1 cut(s) 666
MlyI GAGTC 4 cut(s) 223, 636, 820, 1163
MmeI TCCRAC 1 cut(s) 868
Mox20I TGGCCA 1 cut(s) 666
Mph1103I ATGCAT 1 cut(s) 181
MroXI GAANNNNTTC 1 cut(s) 1308
MscI TGGCCA 1 cut(s) 666
MseI TTAA 7 cut(s) 62, 303, 614, 695, 980, 1491, 1502
MslI CAYNNNNRTG 3 cut(s) 209, 966, 1064
Msp20I TGGCCA 1 cut(s) 666
MspI CCGG 3 cut(s) 38, 639, 990
MspR9I CCNGG 3 cut(s) 639, 668, 1467
MunI CAATTG 2 cut(s) 1005, 1242
MvaI CCWGG 2 cut(s) 668, 1467
MvnI CGCG 1 cut(s) 45
MwoI GCNNNNNNNGC 5 cut(s) 161, 365, 687, 821, 1418
NciI CCSGG 1 cut(s) 639
NdeI CATATG 1 cut(s) 532
NdeII GATC 5 cut(s) 28, 263, 971, 1328, 1430
NlaIII CATG 5 cut(s) 183, 229, 806, 1129, 1201
NlaIV GGNNCC 4 cut(s) 274, 973, 1111, 1432
NmuCI GTSAC 1 cut(s) 1000
NsiI ATGCAT 1 cut(s) 181
NspI RCATGY 1 cut(s) 1201
PagI TCATGA 2 cut(s) 225, 802
PasI CCCWGGG 1 cut(s) 1466
PdmI GAANNNNTTC 1 cut(s) 1308
PfeI GAWTC 4 cut(s) 125, 492, 786, 907
PflMI CCANNNNNTGG 3 cut(s) 662, 849, 1406
PfoI TCCNGGA 1 cut(s) 637
PkrI GCNGC 3 cut(s) 394, 673, 751
PleI GAGTC 4 cut(s) 223, 636, 820, 1163
PpsI GAGTC 4 cut(s) 223, 636, 820, 1163
PshBI ATTAAT 1 cut(s) 614
PsiI TTATAA 1 cut(s) 1538
Psp6I CCWGG 2 cut(s) 666, 1465
PspFI CCCAGC 1 cut(s) 1543
PspGI CCWGG 2 cut(s) 666, 1465
PspN4I GGNNCC 4 cut(s) 274, 973, 1111, 1432
PspOMI GGGCCC 1 cut(s) 272
PspPI GGNCC 3 cut(s) 35, 272, 273
PsuI RGATCY 3 cut(s) 28, 971, 1430
RsaI GTAC 2 cut(s) 215, 483
RsaNI GTAC 2 cut(s) 214, 482
RseI CAYNNNNRTG 3 cut(s) 209, 966, 1064
SaqAI TTAA 7 cut(s) 62, 303, 614, 695, 980, 1491, 1502
SatI GCNGC 3 cut(s) 393, 672, 750
Sau3AI GATC 5 cut(s) 28, 263, 971, 1328, 1430
Sau96I GGNCC 3 cut(s) 35, 272, 273
SchI GAGTC 4 cut(s) 223, 636, 820, 1163
ScrFI CCNGG 3 cut(s) 639, 668, 1467
SduI GDGCHC 3 cut(s) 166, 276, 1559
SfaNI GCATC 2 cut(s) 404, 911
SfcI CTRYAG 1 cut(s) 1314
SinI GGWCC 1 cut(s) 35
SmiMI CAYNNNNRTG 3 cut(s) 209, 966, 1064
SsiI CCGC 6 cut(s) 45, 417, 446, 749, 975, 1412
SspI AATATT 1 cut(s) 756
SspMI CTAG 1 cut(s) 1364
StyD4I CCNGG 3 cut(s) 637, 666, 1465
TaaI ACNGT 3 cut(s) 847, 968, 1360
TaqI TCGA 2 cut(s) 207, 905
TatI WGTACW 2 cut(s) 213, 481
TauI GCSGC 1 cut(s) 752
TfiI GAWTC 4 cut(s) 125, 492, 786, 907
Tru1I TTAA 7 cut(s) 62, 303, 614, 695, 980, 1491, 1502
Tru9I TTAA 7 cut(s) 62, 303, 614, 695, 980, 1491, 1502
TscAI CASTG 3 cut(s) 850, 973, 1047
TseFI GTSAC 1 cut(s) 1000
TseI GCWGC 2 cut(s) 392, 671
Tsp45I GTSAC 1 cut(s) 1000
TspDTI ATGAA 6 cut(s) 87, 456, 819, 950, 1114, 1566
TspRI CASTG 3 cut(s) 850, 973, 1047
Van91I CCANNNNNTGG 3 cut(s) 662, 849, 1406
VneI GTGCAC 1 cut(s) 162
VpaK11BI GGWCC 1 cut(s) 35
VspI ATTAAT 1 cut(s) 614
XapI RAATTY 4 cut(s) 424, 606, 807, 1208
XceI RCATGY 1 cut(s) 1201
XcmI CCANNNNNNNNNTGG 1 cut(s) 674
XmiI GTMKAC 1 cut(s) 1130
XmnI GAANNNNTTC 1 cut(s) 1308
XspI CTAG 1 cut(s) 1364
Zsp2I ATGCAT 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.