RLG00000027134

Coronatine-insensitive protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0005027
Physical Location & Seq
Forward (+)
8852897 .. 8858193
5297 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027134

Sequence Viewer

Length: 2250 bp
ATGTTTAATCTGATACCGGAGGATTGGGGAGGCTTTGTGACGCCGTGGGTGGAGGAGATTGCCGAGTCGTTTAAGAGCTTGAAGGCTTTGTATTTCCGGAGAATGATTGTGAGGGATTCCGACTTGGAGCTATTGGCGCGGTCACGCGGCAGTGAGCTCCAATCGCTTAAGCTCGACAAGTGCTCCGGGTTTTCAACTGACGGCCTTGTCCACATCGCCCGCTCCTGCAGCTTGATAATTGAGAAAGAGGATGAGTGGGGTGAATGGCTACATGAGCTTGCTACAAACAACACTGTACTCGAGACTTTAAACTTCTATATGACGGATCTTGGCAGAATCAGATTTGAAGACCTCGAACTCATAGCCAGGAATTGCCCCTCCTTAACCACTGTGAAAATTAGCAATTGTGAAATTTTGGATCTTCTGGGTTTCTTCTGTCATGCAACTGCTTTAGAAGAATTTTGTGGAGGTTCCTTCGATGATCGATTAGAGAATGATCAATCAGAGAAGTACTCAGTTGTATCACTGCCACGAAAGATATGTCTTTTGGGTCTAACGATGATGGGGAAGAATGAATTGCCTATTGTATTCCCATTAGCAGCTGCCCTCAAAAAGTTGGATCTCCTTTATGCATTGCTCGGCACTGAAGACCATTGTACTTTAATTCAAAAAGGATTAGAAGTCCTTGCTCAGAGTCGCAAGAGACTGAAGAGGCTTCGAATTGAGCGAGGTGCTGTTGAGCATGGTATGCAGGACGAAGATGGTGTTGTTTCACAGAGGGGTCTGATGGCTTTGGCACTGGGCTGCCTGGAACTGGAGTACTTGGCTGTCTACATATCAGATATCACAAATGCATCTTTGGAATACATTGGGACTCACTCTAAAAATCTAAATGATTTTCGCCTTGTCCTGCTTGACCGTGAAGAGATGATAACAGATCTACCACTTGACAATGGCTATAGTCAAAATGTGAGGTGGATGCTTCTAGGTTATGTTGGTGAATCTGATGTAGGGCTTTTGGAGTTTTCAAAGGGTTGCCCTAGTCTGCAGAAACTAGAAATGAGGGGCTGTTGCTTCAGTGAGCGTGCACTGGCTGTTGCAGTGATGCAGCTGACTGCGCTAAGGTACTTGTGGGTGCAAGGGTACAGGGGATCTCCAACTGGTCGTGATCTTTTGGCAATGGCTCGCCCGTATTGGAATATTGAGTTGATTCCTCCTAGACGAGTTGATGTTCTTGATCTGATCGGGAAGGCAGTAGTGGTTGAGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGACCAAGAACAGATTTTCCAGATACTTTGCCAATGCCAACTTCTCAGCAGATCCCAACCTTCAATCCTTTGATTTGTGATCCGATTGTTCACATTCCAGTTATGGATATTTGCTCTTCCGGTCAAGGCTACTTTGTCAGTGCTGGCCTCGCTATTTCAACTGGCATTCCTCCCTTGCACTCAAACCTTATGAATCCATTGATTCCTCAAACTGATTCCATGTTGGAGAAGGGGTTTAAGAATCCTCTTCCTCAAGGCGGCAGCTTCTCAAATTCTCGCCGTTGCTCGTCAATAGCGGTTATGGCAGATTGTGGTCTGCTTATTCTCTTCCTCGTTGCGCTGGGTAGCGCTGAGGCTGTGTTGATGTCGGGAGTTGGGGGCGCTGTTGGATCTGCGTCCAAGCTTAACGGTGAAGTGCAAGATGTGGCCTCGTTTGCGGGGATGGCATCTAGGTGGCGGATGAGTAGTGATCCGGTCTTGTGTTGGTCAAGATCGGATCGGAAGAGTCAATTCCGATTAGGTCGAAGGGACGATGGTGCACCTACTACAGGTGCTGATATTTGGTGTGCCGCCATCGTGGAAGGTGTGCTGCTTTGCTCAGACTCGGGGATTGCTGCTTTTGATGGCGGTGCTCTCGGGTATAATGGCTGCAAGTGTGGAGGCAAGGGCGGCTGTCAAATTGTATCGACTACCAGAGGTAAGGACGGCTCGGACCCTTCTTTGGCGGGGATGATAGCTTGGTTCTACTCGACAATGGCTAGTACAACGGCAAGATCTACGACATCAGTGGTGGCGGCAGCGGTTTGCAAATTGGAGACGATGATGGGCTGGAATAGGGGGTGGAGTCTATGGGGTGTCCTTAGCAATCTCTACTTGGGCCCTCTGGGCTTCATTCTGGTCTGTGAGCATTACTTGTTGGGCTTGCGTGGGCTGGGCCCTCAGCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009628 GO:0009639 GO:0009641 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009861 GO:0009867 GO:0009900 GO:0009901 GO:0009908 GO:0009909 GO:0009966 GO:0009987 GO:0010033 GO:0010118 GO:0010218 GO:0010498 GO:0010646 GO:0019538 GO:0019941 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0030163 GO:0031146 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045087 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080134 GO:0090567 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:2000022 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like

Protein Analysis

750

Amino Acids

81.98

Weight (kDa)

5.38

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transp_inhibit PF18791 1 - 32 1.2e-11 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccBSI CCGCTC 1 cut(s) 222
AccI GTMKAC 1 cut(s) 831
AccII CGCG 2 cut(s) 139, 147
AccIII TCCGGA 1 cut(s) 96
AclWI GGATC 9 cut(s) 333, 426, 627, 1159, 1348, 1376, 1699, 1766, 1806
AcsI RAATTY 3 cut(s) 411, 458, 1573
AcuI CTGAAG 3 cut(s) 666, 728, 1060
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 7 cut(s) 297, 512, 658, 821, 1127, 1145, 2065
AfeI AGCGCT 1 cut(s) 1651
AfiI CCNNNNNNNGG 4 cut(s) 814, 1559, 1850, 2023
AflII CTTAAG 1 cut(s) 167
AgsI TTSAA 7 cut(s) 82, 195, 347, 668, 1029, 1366, 1461
AjnI CCWGG 2 cut(s) 365, 807
AjuI GAANNNNNNNTTGG 2 cut(s) 1327, 1359
AloI GAACNNNNNNTCC 2 cut(s) 1303, 1335
Alw21I GWGCWC 5 cut(s) 159, 185, 1090, 1843, 1936
Alw26I GTCTC 3 cut(s) 296, 697, 2111
Alw44I GTGCAC 2 cut(s) 1086, 1839
AlwI GGATC 9 cut(s) 333, 426, 627, 1159, 1348, 1376, 1699, 1766, 1806
AlwNI CAGNNNCTG 1 cut(s) 1856
Ama87I CYCGRG 3 cut(s) 299, 1906, 1937
Aor13HI TCCGGA 1 cut(s) 96
Aor51HI AGCGCT 1 cut(s) 1651
AoxI GGCC 5 cut(s) 202, 1447, 1728, 2179, 2236
ApaI GGGCCC 2 cut(s) 2183, 2240
ApaLI GTGCAC 2 cut(s) 1086, 1839
ApoI RAATTY 3 cut(s) 411, 458, 1573
ArsI GACNNNNNNTTYG 2 cut(s) 526, 558
AspLEI GCGC 5 cut(s) 139, 1120, 1642, 1652, 1685
AspS9I GGNCC 6 cut(s) 1304, 2014, 2179, 2180, 2236, 2237
AsuC2I CCSGG 1 cut(s) 187
AsuHPI GGTGA 3 cut(s) 272, 1010, 1724
AsuII TTCGAA 1 cut(s) 718
AvaI CYCGRG 3 cut(s) 299, 1906, 1937
AvaII GGWCC 2 cut(s) 1304, 2014
BaeGI GKGCMC 4 cut(s) 1090, 1843, 2183, 2240
BanII GRGCYC 3 cut(s) 159, 2183, 2240
BbsI GAAGAC 2 cut(s) 354, 654
Bbv12I GWGCWC 5 cut(s) 159, 185, 1090, 1843, 1936
BbvCI CCTCAGC 2 cut(s) 1653, 2241
BccI CCATC 8 cut(s) 556, 755, 781, 1738, 1829, 1883, 1919, 2119
BceAI ACGGC 5 cut(s) 28, 217, 1566, 2023, 2085
BciT130I CCWGG 2 cut(s) 367, 809
BclI TGATCA 1 cut(s) 496
BcnI CCSGG 1 cut(s) 187
BcoDI GTCTC 3 cut(s) 296, 697, 2111
BfaI CTAG 6 cut(s) 986, 1041, 1055, 1218, 1752, 2061
BfmI CTRYAG 4 cut(s) 226, 958, 1046, 1848
BfoI RGCGCY 2 cut(s) 1653, 1686
BfrI CTTAAG 1 cut(s) 167
BglI GCCNNNNNGGC 1 cut(s) 2187
BglII AGATCT 2 cut(s) 937, 2075
BmcAI AGTACT 2 cut(s) 512, 821
Bme1390I CCNGG 3 cut(s) 187, 367, 809
Bme18I GGWCC 2 cut(s) 1304, 2014
BmeT110I CYCGRG 3 cut(s) 299, 1906, 1937
BmgT120I GGNCC 6 cut(s) 1304, 2014, 2179, 2180, 2236, 2237
BmiI GGNNCC 4 cut(s) 472, 2016, 2181, 2238
BmrFI CCNGG 3 cut(s) 187, 367, 809
BmrI ACTGGG 1 cut(s) 809
BmsI GCATC 5 cut(s) 863, 969, 1095, 1276, 1757
BmuI ACTGGG 1 cut(s) 809
BpiI GAAGAC 2 cut(s) 354, 654
BplI GAGNNNNNCTC 2 cut(s) 497, 529
BpmI CTGGAG 1 cut(s) 836
Bpu10I CCTNAGC 4 cut(s) 1121, 1653, 2162, 2241
Bpu14I TTCGAA 1 cut(s) 718
BpuEI CTTGAG 1 cut(s) 1539
BpuMI CCSGG 1 cut(s) 187
Bsa29I ATCGAT 1 cut(s) 484
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 1 cut(s) 44
BsaWI WCCGGW 4 cut(s) 16, 96, 1421, 1774
BsaXI ACNNNNNCTCC 6 cut(s) 21, 51, 167, 197, 1520, 1550
Bsc4I CCNNNNNNNGG 4 cut(s) 814, 1559, 1850, 2023
Bse1I ACTGG 6 cut(s) 804, 819, 1095, 1165, 1400, 1468
Bse3DI GCAATG 2 cut(s) 632, 1185
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 2 cut(s) 367, 809
BseCI ATCGAT 1 cut(s) 484
BseDI CCNNGG 1 cut(s) 44
BseGI GGATG 6 cut(s) 256, 984, 1267, 1749, 1767, 2037
BseLI CCNNNNNNNGG 4 cut(s) 814, 1559, 1850, 2023
BseMI GCAATG 2 cut(s) 632, 1185
BseMII CTCAG 5 cut(s) 528, 704, 1361, 1644, 1914
BseNI ACTGG 6 cut(s) 804, 819, 1095, 1165, 1400, 1468
BseRI GAGGAG 1 cut(s) 68
BseSI GKGCMC 4 cut(s) 1090, 1843, 2183, 2240
BseYI CCCAGC 2 cut(s) 1642, 2233
Bsh1236I CGCG 2 cut(s) 139, 147
BshFI GGCC 5 cut(s) 204, 1449, 1730, 2181, 2238
BshVI ATCGAT 1 cut(s) 484
BsiHKAI GWGCWC 5 cut(s) 159, 185, 1090, 1843, 1936
BsiHKCI CYCGRG 3 cut(s) 299, 1906, 1937
BsiSI CCGG 5 cut(s) 17, 97, 186, 1422, 1775
BslFI GGGAC 2 cut(s) 886, 1844
BslI CCNNNNNNNGG 4 cut(s) 814, 1559, 1850, 2023
BsmAI GTCTC 3 cut(s) 296, 697, 2111
BsmBI CGTCTC 1 cut(s) 2111
BsmFI GGGAC 2 cut(s) 886, 1844
BsmI GAATGC 1 cut(s) 1467
BsnI GGCC 5 cut(s) 204, 1449, 1730, 2181, 2238
BsoBI CYCGRG 3 cut(s) 299, 1906, 1937
Bsp119I TTCGAA 1 cut(s) 718
Bsp120I GGGCCC 2 cut(s) 2179, 2236
Bsp1286I GDGCHC 7 cut(s) 159, 185, 1090, 1843, 1936, 2183, 2240
Bsp13I TCCGGA 1 cut(s) 96
BspANI GGCC 5 cut(s) 204, 1449, 1730, 2181, 2238
BspCNI CTCAG 5 cut(s) 527, 703, 1360, 1645, 1913
BspDI ATCGAT 1 cut(s) 484
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 2 cut(s) 139, 147
BspLI GGNNCC 4 cut(s) 472, 2016, 2181, 2238
BspMAI CTGCAG 2 cut(s) 230, 1050
BspPI GGATC 9 cut(s) 333, 426, 627, 1159, 1348, 1376, 1699, 1766, 1806
BspQI GCTCTTC 1 cut(s) 1423
BspT104I TTCGAA 1 cut(s) 718
BspTI CTTAAG 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 222
BsrDI GCAATG 2 cut(s) 632, 1185
BsrI ACTGG 6 cut(s) 804, 819, 1095, 1165, 1400, 1468
BssECI CCNNGG 1 cut(s) 44
BssNI GRCGYC 1 cut(s) 41
Bst2UI CCWGG 2 cut(s) 367, 809
Bst4CI ACNGT 4 cut(s) 295, 391, 920, 1712
Bst6I CTCTTC 6 cut(s) 704, 918, 1423, 1554, 1634, 1799
BstACI GRCGYC 1 cut(s) 41
BstAFI CTTAAG 1 cut(s) 167
BstAPI GCANNNNNTGC 1 cut(s) 748
BstBI TTCGAA 1 cut(s) 718
BstC8I GCNNGC 6 cut(s) 220, 279, 1086, 1186, 1447, 2225
BstDEI CTNAG 8 cut(s) 514, 690, 1121, 1347, 1653, 1900, 2162, 2241
BstDSI CCRYGG 1 cut(s) 44
BstENI CCTNNNNNAGG 1 cut(s) 1848
BstF5I GGATG 6 cut(s) 256, 984, 1267, 1749, 1767, 2037
BstFNI CGCG 2 cut(s) 139, 147
BstH2I RGCGCY 2 cut(s) 1653, 1686
BstHHI GCGC 5 cut(s) 139, 1120, 1642, 1652, 1685
BstMAI GTCTC 3 cut(s) 296, 697, 2111
BstNI CCWGG 2 cut(s) 367, 809
BstSCI CCNGG 3 cut(s) 185, 365, 807
BstSFI CTRYAG 4 cut(s) 226, 958, 1046, 1848
BstSLI GKGCMC 4 cut(s) 1090, 1843, 2183, 2240
BstUI CGCG 2 cut(s) 139, 147
BstV2I GAAGAC 2 cut(s) 354, 654
BstX2I RGATCY 8 cut(s) 325, 418, 619, 937, 1151, 1353, 1691, 2075
BstYI RGATCY 8 cut(s) 325, 418, 619, 937, 1151, 1353, 1691, 2075
Bsu15I ATCGAT 1 cut(s) 484
BsuRI GGCC 5 cut(s) 204, 1449, 1730, 2181, 2238
BsuTUI ATCGAT 1 cut(s) 484
BtgI CCRYGG 1 cut(s) 44
BtgZI GCGATG 1 cut(s) 199
BtsCI GGATG 6 cut(s) 256, 984, 1267, 1749, 1767, 2037
BtsI GCAGTG 3 cut(s) 157, 524, 1107
Cac8I GCNNGC 6 cut(s) 220, 279, 1086, 1186, 1447, 2225
CaiI CAGNNNCTG 1 cut(s) 1856
CfoI GCGC 5 cut(s) 139, 1120, 1642, 1652, 1685
Cfr13I GGNCC 6 cut(s) 1304, 2014, 2179, 2180, 2236, 2237
ClaI ATCGAT 1 cut(s) 484
CseI GACGC 2 cut(s) 49, 1686
Csp6I GTAC 7 cut(s) 296, 511, 657, 820, 1126, 1144, 2064
CviAII CATG 4 cut(s) 272, 440, 743, 1522
CviQI GTAC 7 cut(s) 296, 511, 657, 820, 1126, 1144, 2064
DdeI CTNAG 8 cut(s) 514, 690, 1121, 1347, 1653, 1900, 2162, 2241
DraI TTTAAA 1 cut(s) 309
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
Eam1104I CTCTTC 6 cut(s) 704, 918, 1423, 1554, 1634, 1799
EarI CTCTTC 6 cut(s) 704, 918, 1423, 1554, 1634, 1799
EciI GGCGGA 1 cut(s) 1774
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 3 cut(s) 159, 2183, 2240
Eco32I GATATC 1 cut(s) 844
Eco47I GGWCC 2 cut(s) 1304, 2014
Eco47III AGCGCT 1 cut(s) 1651
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 3 cut(s) 666, 728, 1060
Eco88I CYCGRG 3 cut(s) 299, 1906, 1937
EcoICRI GAGCTC 1 cut(s) 157
EcoNI CCTNNNNNAGG 1 cut(s) 1848
EcoO109I RGGNCCY 2 cut(s) 2180, 2237
EcoRII CCWGG 2 cut(s) 365, 807
EcoRV GATATC 1 cut(s) 844
EcoT22I ATGCAT 2 cut(s) 634, 856
EcoT38I GRGCYC 3 cut(s) 159, 2183, 2240
Esp3I CGTCTC 1 cut(s) 2111
FaeI CATG 4 cut(s) 275, 443, 746, 1525
FaqI GGGAC 2 cut(s) 886, 1844
FatI CATG 4 cut(s) 271, 439, 742, 1521
FauI CCCGC 3 cut(s) 227, 1732, 2020
FbaI TGATCA 1 cut(s) 496
FblI GTMKAC 1 cut(s) 831
FokI GGATG 6 cut(s) 263, 991, 1254, 1756, 1774, 2044
FriOI GRGCYC 3 cut(s) 159, 2183, 2240
FspBI CTAG 6 cut(s) 986, 1041, 1055, 1218, 1752, 2061
GlaI GCGC 5 cut(s) 138, 1119, 1641, 1651, 1684
GsaI CCCAGC 2 cut(s) 1646, 2237
GsuI CTGGAG 1 cut(s) 836
HaeII RGCGCY 2 cut(s) 1653, 1686
HaeIII GGCC 5 cut(s) 204, 1449, 1730, 2181, 2238
HapII CCGG 5 cut(s) 17, 97, 186, 1422, 1775
HgaI GACGC 2 cut(s) 49, 1686
HhaI GCGC 5 cut(s) 139, 1120, 1642, 1652, 1685
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 4 cut(s) 275, 443, 746, 1525
Hin6I GCGC 5 cut(s) 137, 1118, 1640, 1650, 1683
HinP1I GCGC 5 cut(s) 137, 1118, 1640, 1650, 1683
HindIII AAGCTT 1 cut(s) 1703
HpaII CCGG 5 cut(s) 17, 97, 186, 1422, 1775
HphI GGTGA 3 cut(s) 272, 1010, 1724
Hpy166II GTNNAC 5 cut(s) 211, 832, 1088, 1393, 1841
Hpy188III TCNNGA 8 cut(s) 97, 301, 1166, 1235, 1246, 1322, 1671, 1791
Hpy8I GTNNAC 5 cut(s) 211, 832, 1088, 1393, 1841
HpyAV CCTTC 8 cut(s) 76, 484, 1243, 1372, 1525, 1821, 1877, 2028
HpyCH4III ACNGT 4 cut(s) 295, 391, 920, 1712
HpyF3I CTNAG 8 cut(s) 514, 690, 1121, 1347, 1653, 1900, 2162, 2241
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 4 cut(s) 275, 443, 746, 1525
HspAI GCGC 5 cut(s) 137, 1118, 1640, 1650, 1683
Kpn2I TCCGGA 1 cut(s) 96
Ksp22I TGATCA 1 cut(s) 496
LguI GCTCTTC 1 cut(s) 1423
LmnI GCTCC 4 cut(s) 127, 162, 188, 227
LweI GCATC 5 cut(s) 863, 969, 1095, 1276, 1757
MaeI CTAG 6 cut(s) 986, 1041, 1055, 1218, 1752, 2061
MaeIII GTNAC 2 cut(s) 37, 141
MbiI CCGCTC 1 cut(s) 222
MfeI CAATTG 1 cut(s) 403
MflI RGATCY 8 cut(s) 325, 418, 619, 937, 1151, 1353, 1691, 2075
MhlI GDGCHC 7 cut(s) 159, 185, 1090, 1843, 1936, 2183, 2240
MlyI GAGTC 6 cut(s) 74, 703, 868, 1816, 1898, 2155
MmeI TCCRAC 5 cut(s) 144, 597, 1181, 1506, 1669
Mph1103I ATGCAT 2 cut(s) 634, 856
MroI TCCGGA 1 cut(s) 96
MseI TTAA 9 cut(s) 6, 72, 168, 308, 383, 662, 1539, 1707, 2248
MslI CAYNNNNRTG 1 cut(s) 1753
MspA1I CMGCKG 3 cut(s) 602, 1111, 2102
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 5 cut(s) 17, 97, 186, 1422, 1775
MspR9I CCNGG 3 cut(s) 187, 367, 809
MunI CAATTG 1 cut(s) 403
Mva1269I GAATGC 1 cut(s) 1467
MvaI CCWGG 2 cut(s) 367, 809
MvnI CGCG 2 cut(s) 139, 147
NciI CCSGG 1 cut(s) 187
NlaIII CATG 4 cut(s) 275, 443, 746, 1525
NlaIV GGNNCC 4 cut(s) 472, 2016, 2181, 2238
NmeAIII GCCGAG 2 cut(s) 88, 618
NmuCI GTSAC 2 cut(s) 37, 141
NsiI ATGCAT 2 cut(s) 634, 856
NspV TTCGAA 1 cut(s) 718
PaeR7I CTCGAG 1 cut(s) 299
PciSI GCTCTTC 1 cut(s) 1423
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 1 cut(s) 1467
PfeI GAWTC 8 cut(s) 116, 336, 1001, 1210, 1495, 1504, 1517, 1543
PleI GAGTC 6 cut(s) 73, 702, 868, 1815, 1898, 2154
PpsI GAGTC 6 cut(s) 73, 702, 868, 1815, 1898, 2154
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 2 cut(s) 365, 807
PspFI CCCAGC 2 cut(s) 1642, 2233
PspGI CCWGG 2 cut(s) 365, 807
PspN4I GGNNCC 4 cut(s) 472, 2016, 2181, 2238
PspOMI GGGCCC 2 cut(s) 2179, 2236
PspPI GGNCC 6 cut(s) 1304, 2014, 2179, 2180, 2236, 2237
PstI CTGCAG 2 cut(s) 230, 1050
PstNI CAGNNNCTG 1 cut(s) 1856
PsuI RGATCY 8 cut(s) 325, 418, 619, 937, 1151, 1353, 1691, 2075
PvuII CAGCTG 2 cut(s) 602, 1111
RsaI GTAC 7 cut(s) 297, 512, 658, 821, 1127, 1145, 2065
RsaNI GTAC 7 cut(s) 296, 511, 657, 820, 1126, 1144, 2064
RseI CAYNNNNRTG 1 cut(s) 1753
SacI GAGCTC 1 cut(s) 159
SapI GCTCTTC 1 cut(s) 1423
SaqAI TTAA 9 cut(s) 6, 72, 168, 308, 383, 662, 1539, 1707, 2248
Sau96I GGNCC 6 cut(s) 1304, 2014, 2179, 2180, 2236, 2237
ScaI AGTACT 2 cut(s) 512, 821
SchI GAGTC 6 cut(s) 74, 703, 868, 1816, 1898, 2155
ScrFI CCNGG 3 cut(s) 187, 367, 809
SduI GDGCHC 7 cut(s) 159, 185, 1090, 1843, 1936, 2183, 2240
SfaNI GCATC 5 cut(s) 863, 969, 1095, 1276, 1757
SfcI CTRYAG 4 cut(s) 226, 958, 1046, 1848
Sfr274I CTCGAG 1 cut(s) 299
SfuI TTCGAA 1 cut(s) 718
SinI GGWCC 2 cut(s) 1304, 2014
SlaI CTCGAG 1 cut(s) 299
SmiMI CAYNNNNRTG 1 cut(s) 1753
SmlI CTYRAG 3 cut(s) 167, 299, 1554
SmoI CTYRAG 3 cut(s) 167, 299, 1554
SspI AATATT 1 cut(s) 1201
SspMI CTAG 6 cut(s) 986, 1041, 1055, 1218, 1752, 2061
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 3 cut(s) 185, 365, 807
TaaI ACNGT 4 cut(s) 295, 391, 920, 1712
TaqI TCGA 9 cut(s) 174, 300, 354, 477, 484, 718, 1825, 1988, 2051
TatI WGTACW 5 cut(s) 295, 510, 656, 819, 2063
TauI GCSGC 5 cut(s) 150, 1563, 1874, 1974, 2099
TfiI GAWTC 8 cut(s) 116, 336, 1001, 1210, 1495, 1504, 1517, 1543
Tru1I TTAA 9 cut(s) 6, 72, 168, 308, 383, 662, 1539, 1707, 2248
Tru9I TTAA 9 cut(s) 6, 72, 168, 308, 383, 662, 1539, 1707, 2248
TseFI GTSAC 2 cut(s) 37, 141
Tsp45I GTSAC 2 cut(s) 37, 141
TspDTI ATGAA 3 cut(s) 588, 1508, 2182
TspGWI ACGGA 1 cut(s) 338
Vha464I CTTAAG 1 cut(s) 167
VneI GTGCAC 2 cut(s) 1086, 1839
VpaK11BI GGWCC 2 cut(s) 1304, 2014
XagI CCTNNNNNAGG 1 cut(s) 1848
XapI RAATTY 3 cut(s) 411, 458, 1573
XhoI CTCGAG 1 cut(s) 299
XmiI GTMKAC 1 cut(s) 831
XspI CTAG 6 cut(s) 986, 1041, 1055, 1218, 1752, 2061
ZrmI AGTACT 2 cut(s) 512, 821
Zsp2I ATGCAT 2 cut(s) 634, 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.