Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001482.1

Orthogroup ID

OG0005027

Physical Location & Seq

Genomic Coordinates Forward (+)

24563 .. 27884

Gene Structure 3322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001482.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

atgaatactggaatgtccgatgtggtagccggctgcgtgatgccgtatatcaaagactcgaaggaccgggacgccgtgtcgttggtgtgccgacggtggtacgagctggacgcgctcacgcgcgagcacgtgaccatcgcgctctgctacacgacgactcccgagaggctcaggaggcggttccggcagctcaagtcgctgaagctcaagggaaagccgagggcggcgatgtttaatctgataccggaggattggggaggctatgtgacgccgtgggtggaggagattgccgagtcgtttaagagcttgaaggccttgcatttccggagaatgattgtgagtgattccgacctggagctattggcgcggtcacgcggccgtgagctccaatcgcttaagctcgacaagtgctccggcttttcgactgacggccttgtccacatcgcccgcttctgcagggatttgaggaccttgtttttggaggagagctcgataattgagaaagaggatgagtggggtgaatggctacatgagcttgctacaaacaacactgtactcgagactttaaacttctatatgacggatcttggcagaatcagatttgaagaccttgaactcatagccaggaattgcccctccttaaccactgtgaaaattagcgattgtgaaattttggatcttctgggtttcttccgccatgcaactgctttagaagaattttgtggaggttccttcgatgatcgatcagaaaatgatcaatcagagaagtactcagttgtatcactgccacgaaagatatgtcttttgggtctaacgatgttggggaagaatgaaatgcctattgtattcccattagcagctgccctcaaaaagttggatctcctatatgcattgctcgacactgaagaccattgtactttaattcaaaagtgccccaacttggaagttcttgagacaaggaatgtcattggagatagaggattagaagtccttgctcggagttgcaagagactgcagaggctccgaattgagcgaggtgctgatgagcaaggtatggaggacgaagatggtgttgtttcacagaggggtctgatggctttggcacagggctgcctggaactggagtacttggctgtctacgtgtcagatatcacaaatgcatctctggaatacattgggactcactctaaaaatctaaatgattttcgccttgtcctgcttgaccgtgaagagacgataacagatttaccacttgacaatggcgttcgagctctattgaggggatgccaaaagcttcgaaggtttgctttgtatctccgtcctgggggtttgactgatttggggcttagttacgtgggccggtatagtcaaaatgtgagatggatgcttctaggttatgttggtgaatctgatgcaggacttttggagttttcaaagggttgccttagtctgcagaacctagaattgaggggctgttgctttagtgagggtgcactggctgttgcagtgatgcagctgactgcgctaaggtacttgtgggtgcaagggtacaggggatcccaaacgggtcgtgatcttttggcaatgactcgcccgtattggaatattgagttgattcctcctagacgagttaatgttcttgatccgaacggggaggcagcagtggctgagcatccagctcatattcttgcatactactctcttgctggaccaagaacagattttccaaatactgttatccccttggatccagagtctttgattaacgcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009628 GO:0009639 GO:0009641 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009861 GO:0009867 GO:0009900 GO:0009901 GO:0009908 GO:0009909 GO:0009966 GO:0009987 GO:0010033 GO:0010118 GO:0010218 GO:0010498 GO:0010646 GO:0019538 GO:0019941 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0030163 GO:0031146 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045087 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080134 GO:0090567 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:2000022 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

F-box-like

Protein Analysis

590

Amino Acids

66.74

Weight (kDa)

5.48

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005027)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39940
fragaria_vesca	FvH4_7g24000 FvH4_7g24000 FvH4_7g24000
malus_domestica	MD01G1147000.v1.1 MD07G1213600.v1.1
prunus_persica	Prupe.2G246000_v2.0.a1
pyrus_communis	pycom01g16610 pycom07g19640
rosa_chinensis	RchiOBHm_Chr1g0369351 RchiOBHm_Chr1g0369371 RchiOBHm_Chr1g0369381
rosa_laevigata	RLG00000027134 RLG00000027135
rosa_multiflora	Rmu_sc0001482.1_g000008 Rmu_sc0003612.1_g000021
rosa_roxburghii	Rroxscaffold_4G00287690 Rroxscaffold_4G00287710
rosa_rugosa	Rorug01G0349700 Rorug01G0349700
rosa_samantha	Rh1AG357000 Rh1AG357300 Rh1BG321000 Rh1BG321300 Rh1CG335000 Rh1CG335200 Rh1DG351700 Rh1DG352000
rosa_wichuraiana	Rw1G031520 Rw1G031530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	434
AccI	GTMKAC	1 cut(s)	1137
AccII	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
AccIII	TCCGGA	1 cut(s)	324
AciI	CCGC	6 cut(s)	178, 224, 367, 375, 448, 694
AclWI	GGATC	8 cut(s)	591, 684, 885, 1551, 1564, 1637, 1742, 1755
AcoI	YGGCCR	1 cut(s)	376
AcsI	RAATTY	2 cut(s)	669, 716
AcuI	CTGAAG	2 cut(s)	221, 924
AcvI	CACGTG	1 cut(s)	130
AcyI	GRCGYC	2 cut(s)	72, 269
AfaI	GTAC	7 cut(s)	101, 555, 770, 916, 1127, 1532, 1550
AfiI	CCNNNNNNNGG	3 cut(s)	940, 1120, 1324
AflII	CTTAAG	1 cut(s)	395
AflIII	ACRYGT	1 cut(s)	1140
AgsI	TTSAA	5 cut(s)	310, 605, 614, 926, 1434
AhdI	GACNNNNNGTC	1 cut(s)	76
AjnI	CCWGG	4 cut(s)	351, 623, 1113, 1321
AloI	GAACNNNNNNTCC	2 cut(s)	1708, 1740
Alw21I	GWGCWC	6 cut(s)	129, 387, 413, 491, 1273, 1495
Alw26I	GTCTC	4 cut(s)	554, 947, 1003, 1226
Alw44I	GTGCAC	1 cut(s)	1491
AlwI	GGATC	8 cut(s)	591, 684, 885, 1551, 1564, 1637, 1742, 1755
AlwNI	CAGNNNCTG	1 cut(s)	1667
Ama87I	CYCGRG	2 cut(s)	161, 557
Aor13HI	TCCGGA	1 cut(s)	324
AoxI	GGCC	4 cut(s)	312, 376, 430, 1357
ApaLI	GTGCAC	1 cut(s)	1491
ApeKI	GCWGC	7 cut(s)	33, 187, 857, 860, 1110, 1513, 1658
ApoI	RAATTY	2 cut(s)	669, 716
ArsI	GACNNNNNNTTYG	4 cut(s)	460, 492, 784, 816
AspLEI	GCGC	5 cut(s)	115, 123, 142, 367, 1525
AspS9I	GGNCC	4 cut(s)	64, 468, 1357, 1709
AsuC2I	CCSGG	1 cut(s)	68
AsuHPI	GGTGA	2 cut(s)	530, 1415
AsuII	TTCGAA	1 cut(s)	1297
AvaI	CYCGRG	2 cut(s)	161, 557
AvaII	GGWCC	3 cut(s)	64, 468, 1709
BaeGI	GKGCMC	2 cut(s)	935, 1495
BamHI	GGATCC	2 cut(s)	1556, 1747
BanII	GRGCYC	3 cut(s)	387, 491, 1273
BbrPI	CACGTG	1 cut(s)	130
BbsI	GAAGAC	2 cut(s)	612, 912
Bbv12I	GWGCWC	6 cut(s)	129, 387, 413, 491, 1273, 1495
BbvI	GCAGC	7 cut(s)	20, 199, 847, 869, 1097, 1525, 1670
BccI	CCATC	4 cut(s)	143, 1061, 1087, 1374
BceAI	ACGGC	5 cut(s)	28, 59, 256, 363, 445
BciT130I	CCWGG	4 cut(s)	353, 625, 1115, 1323
BclI	TGATCA	1 cut(s)	754
BcnI	CCSGG	1 cut(s)	68
BcoDI	GTCTC	4 cut(s)	554, 947, 1003, 1226
BfaI	CTAG	3 cut(s)	1391, 1460, 1623
BfmI	CTRYAG	3 cut(s)	454, 1013, 1451
BfrI	CTTAAG	1 cut(s)	395
BisI	GCNGC	9 cut(s)	34, 188, 225, 376, 858, 861, 1111, 1514, 1659
BlpI	GCTNAGC	1 cut(s)	1668
BlsI	GCNGC	9 cut(s)	35, 189, 226, 377, 859, 862, 1112, 1515, 1660
BmcAI	AGTACT	2 cut(s)	770, 1127
Bme1390I	CCNGG	5 cut(s)	68, 353, 625, 1115, 1323
Bme18I	GGWCC	3 cut(s)	64, 468, 1709
BmeRI	GACNNNNNGTC	1 cut(s)	76
BmeT110I	CYCGRG	2 cut(s)	161, 557
BmgT120I	GGNCC	4 cut(s)	64, 468, 1357, 1709
BmiI	GGNNCC	5 cut(s)	182, 730, 1022, 1558, 1749
BmrFI	CCNGG	5 cut(s)	68, 353, 625, 1115, 1323
BmsI	GCATC	7 cut(s)	30, 1169, 1274, 1374, 1402, 1500, 1681
BpiI	GAAGAC	2 cut(s)	612, 912
BplI	GAGNNNNNCTC	4 cut(s)	473, 505, 755, 787
BpmI	CTGGAG	2 cut(s)	374, 1142
Bpu10I	CCTNAGC	2 cut(s)	170, 1526
Bpu1102I	GCTNAGC	1 cut(s)	1668
Bpu14I	TTCGAA	1 cut(s)	1297
BpuEI	CTTGAG	3 cut(s)	176, 191, 971
BpuMI	CCSGG	1 cut(s)	68
Bsa29I	ATCGAT	1 cut(s)	742
BsaAI	YACGTR	3 cut(s)	130, 1141, 1354
BsaHI	GRCGYC	2 cut(s)	72, 269
BsaJI	CCNNGG	4 cut(s)	218, 272, 1322, 1743
BsaWI	WCCGGW	2 cut(s)	244, 324
BsaXI	ACNNNNNCTCC	6 cut(s)	142, 172, 249, 279, 395, 425
Bsc4I	CCNNNNNNNGG	3 cut(s)	940, 1120, 1324
Bse118I	RCCGGY	2 cut(s)	29, 1359
Bse1I	ACTGG	3 cut(s)	13, 1125, 1500
Bse3DI	GCAATG	2 cut(s)	890, 1590
BseAI	TCCGGA	1 cut(s)	324
BseBI	CCWGG	4 cut(s)	353, 625, 1115, 1323
BseCI	ATCGAT	1 cut(s)	742
BseDI	CCNNGG	4 cut(s)	218, 272, 1322, 1743
BseGI	GGATG	4 cut(s)	514, 1289, 1389, 1672
BseLI	CCNNNNNNNGG	3 cut(s)	940, 1120, 1324
BseMI	GCAATG	2 cut(s)	890, 1590
BseMII	CTCAG	3 cut(s)	184, 786, 1659
BseNI	ACTGG	3 cut(s)	13, 1125, 1500
BseRI	GAGGAG	2 cut(s)	296, 497
BseSI	GKGCMC	2 cut(s)	935, 1495
BseX3I	CGGCCG	1 cut(s)	376
BseXI	GCAGC	7 cut(s)	20, 199, 847, 869, 1097, 1525, 1670
Bsh1236I	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
Bsh1285I	CGRYCG	1 cut(s)	379
BshFI	GGCC	4 cut(s)	314, 378, 432, 1359
BshVI	ATCGAT	1 cut(s)	742
BsiEI	CGRYCG	1 cut(s)	379
BsiHKAI	GWGCWC	6 cut(s)	129, 387, 413, 491, 1273, 1495
BsiHKCI	CYCGRG	2 cut(s)	161, 557
BsiSI	CCGG	7 cut(s)	30, 67, 184, 245, 325, 414, 1360
BslFI	GGGAC	2 cut(s)	83, 1192
BslI	CCNNNNNNNGG	3 cut(s)	940, 1120, 1324
BsmAI	GTCTC	4 cut(s)	554, 947, 1003, 1226
BsmBI	CGTCTC	1 cut(s)	1226
BsmFI	GGGAC	2 cut(s)	83, 1192
BsnI	GGCC	4 cut(s)	314, 378, 432, 1359
BsoBI	CYCGRG	2 cut(s)	161, 557
Bsp119I	TTCGAA	1 cut(s)	1297
Bsp1286I	GDGCHC	7 cut(s)	129, 387, 413, 491, 935, 1273, 1495
Bsp13I	TCCGGA	1 cut(s)	324
Bsp1720I	GCTNAGC	1 cut(s)	1668
BspACI	CCGC	6 cut(s)	178, 224, 367, 375, 448, 694
BspANI	GGCC	4 cut(s)	314, 378, 432, 1359
BspCNI	CTCAG	3 cut(s)	183, 785, 1660
BspDI	ATCGAT	1 cut(s)	742
BspEI	TCCGGA	1 cut(s)	324
BspFNI	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
BspLI	GGNNCC	5 cut(s)	182, 730, 1022, 1558, 1749
BspMAI	CTGCAG	3 cut(s)	458, 1017, 1455
BspPI	GGATC	8 cut(s)	591, 684, 885, 1551, 1564, 1637, 1742, 1755
BspT104I	TTCGAA	1 cut(s)	1297
BspTI	CTTAAG	1 cut(s)	395
BsrDI	GCAATG	2 cut(s)	890, 1590
BsrFI	RCCGGY	2 cut(s)	29, 1359
BsrI	ACTGG	3 cut(s)	13, 1125, 1500
BssAI	RCCGGY	2 cut(s)	29, 1359
BssECI	CCNNGG	4 cut(s)	218, 272, 1322, 1743
BssNI	GRCGYC	2 cut(s)	72, 269
BssT1I	CCWWGG	1 cut(s)	1743
Bst2UI	CCWGG	4 cut(s)	353, 625, 1115, 1323
Bst4CI	ACNGT	5 cut(s)	96, 553, 649, 1226, 1735
Bst6I	CTCTTC	1 cut(s)	1224
BstACI	GRCGYC	2 cut(s)	72, 269
BstAFI	CTTAAG	1 cut(s)	395
BstBAI	YACGTR	3 cut(s)	130, 1141, 1354
BstBI	TTCGAA	1 cut(s)	1297
BstC8I	GCNNGC	4 cut(s)	31, 125, 448, 537
BstDEI	CTNAG	6 cut(s)	170, 772, 1346, 1445, 1526, 1668
BstDSI	CCRYGG	1 cut(s)	272
BstF5I	GGATG	4 cut(s)	514, 1289, 1389, 1672
BstFNI	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
BstHHI	GCGC	5 cut(s)	115, 123, 142, 367, 1525
BstMAI	GTCTC	4 cut(s)	554, 947, 1003, 1226
BstMCI	CGRYCG	1 cut(s)	379
BstMWI	GCNNNNNNNGC	9 cut(s)	112, 175, 184, 196, 364, 391, 532, 1522, 1664
BstNI	CCWGG	4 cut(s)	353, 625, 1115, 1323
BstSCI	CCNGG	5 cut(s)	66, 351, 623, 1113, 1321
BstSFI	CTRYAG	3 cut(s)	454, 1013, 1451
BstSLI	GKGCMC	2 cut(s)	935, 1495
BstUI	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
BstV1I	GCAGC	7 cut(s)	20, 199, 847, 869, 1097, 1525, 1670
BstV2I	GAAGAC	2 cut(s)	612, 912
BstX2I	RGATCY	5 cut(s)	583, 676, 877, 1556, 1747
BstYI	RGATCY	5 cut(s)	583, 676, 877, 1556, 1747
BstZI	CGGCCG	1 cut(s)	376
Bsu15I	ATCGAT	1 cut(s)	742
BsuRI	GGCC	4 cut(s)	314, 378, 432, 1359
BsuTUI	ATCGAT	1 cut(s)	742
BtgI	CCRYGG	1 cut(s)	272
BtgZI	GCGATG	3 cut(s)	121, 242, 427
BtsCI	GGATG	4 cut(s)	514, 1289, 1389, 1672
BtsI	GCAGTG	3 cut(s)	782, 1512, 1668
BtsIMutI	CAGTG	7 cut(s)	549, 645, 782, 900, 1493, 1512, 1668
Cac8I	GCNNGC	4 cut(s)	31, 125, 448, 537
CaiI	CAGNNNCTG	1 cut(s)	1667
CfoI	GCGC	5 cut(s)	115, 123, 142, 367, 1525
Cfr10I	RCCGGY	2 cut(s)	29, 1359
Cfr13I	GGNCC	4 cut(s)	64, 468, 1357, 1709
ClaI	ATCGAT	1 cut(s)	742
CseI	GACGC	3 cut(s)	80, 119, 277
Csp6I	GTAC	7 cut(s)	100, 554, 769, 915, 1126, 1531, 1549
CviAII	CATG	2 cut(s)	530, 698
CviQI	GTAC	7 cut(s)	100, 554, 769, 915, 1126, 1531, 1549
DdeI	CTNAG	6 cut(s)	170, 772, 1346, 1445, 1526, 1668
DraI	TTTAAA	1 cut(s)	567
DrdI	GACNNNNNNGTC	1 cut(s)	434
DriI	GACNNNNNGTC	1 cut(s)	76
DseDI	GACNNNNNNGTC	1 cut(s)	434
EaeI	YGGCCR	1 cut(s)	376
EagI	CGGCCG	1 cut(s)	376
Eam1104I	CTCTTC	1 cut(s)	1224
Eam1105I	GACNNNNNGTC	1 cut(s)	76
EarI	CTCTTC	1 cut(s)	1224
EciI	GGCGGA	1 cut(s)	683
Ecl136II	GAGCTC	3 cut(s)	385, 489, 1271
EclXI	CGGCCG	1 cut(s)	376
Eco130I	CCWWGG	1 cut(s)	1743
Eco147I	AGGCCT	1 cut(s)	314
Eco24I	GRGCYC	3 cut(s)	387, 491, 1273
Eco32I	GATATC	1 cut(s)	1150
Eco47I	GGWCC	3 cut(s)	64, 468, 1709
Eco52I	CGGCCG	1 cut(s)	376
Eco53kI	GAGCTC	3 cut(s)	385, 489, 1271
Eco57I	CTGAAG	2 cut(s)	221, 924
Eco72I	CACGTG	1 cut(s)	130
Eco88I	CYCGRG	2 cut(s)	161, 557
EcoICRI	GAGCTC	3 cut(s)	385, 489, 1271
EcoO109I	RGGNCCY	1 cut(s)	468
EcoRII	CCWGG	4 cut(s)	351, 623, 1113, 1321
EcoRV	GATATC	1 cut(s)	1150
EcoT14I	CCWWGG	1 cut(s)	1743
EcoT22I	ATGCAT	2 cut(s)	892, 1162
EcoT38I	GRGCYC	3 cut(s)	387, 491, 1273
ErhI	CCWWGG	1 cut(s)	1743
Esp3I	CGTCTC	1 cut(s)	1226
FaeI	CATG	2 cut(s)	533, 701
FalI	AAGNNNNNCTT	2 cut(s)	1291, 1323
FaqI	GGGAC	2 cut(s)	83, 1192
FatI	CATG	2 cut(s)	529, 697
FauI	CCCGC	1 cut(s)	455
FbaI	TGATCA	1 cut(s)	754
FblI	GTMKAC	1 cut(s)	1137
Fnu4HI	GCNGC	9 cut(s)	34, 188, 225, 376, 858, 861, 1111, 1514, 1659
FokI	GGATG	4 cut(s)	521, 1296, 1396, 1659
FriOI	GRGCYC	3 cut(s)	387, 491, 1273
Fsp4HI	GCNGC	9 cut(s)	34, 188, 225, 376, 858, 861, 1111, 1514, 1659
FspBI	CTAG	3 cut(s)	1391, 1460, 1623
GlaI	GCGC	5 cut(s)	114, 122, 141, 366, 1524
GluI	GCNGC	9 cut(s)	34, 188, 225, 376, 858, 861, 1111, 1514, 1659
GsuI	CTGGAG	2 cut(s)	374, 1142
HaeIII	GGCC	4 cut(s)	314, 378, 432, 1359
HapII	CCGG	7 cut(s)	30, 67, 184, 245, 325, 414, 1360
HgaI	GACGC	3 cut(s)	80, 119, 277
HhaI	GCGC	5 cut(s)	115, 123, 142, 367, 1525
Hin1I	GRCGYC	2 cut(s)	72, 269
Hin1II	CATG	2 cut(s)	533, 701
Hin6I	GCGC	5 cut(s)	113, 121, 140, 365, 1523
HinP1I	GCGC	5 cut(s)	113, 121, 140, 365, 1523
HindIII	AAGCTT	1 cut(s)	1292
HpaII	CCGG	7 cut(s)	30, 67, 184, 245, 325, 414, 1360
HphI	GGTGA	2 cut(s)	530, 1415
Hpy166II	GTNNAC	3 cut(s)	439, 1138, 1493
Hpy188III	TCNNGA	9 cut(s)	161, 172, 325, 559, 950, 1166, 1571, 1640, 1751
Hpy8I	GTNNAC	3 cut(s)	439, 1138, 1493
Hpy99I	CGWCG	2 cut(s)	96, 157
HpyAV	CCTTC	4 cut(s)	55, 304, 742, 1293
HpyCH4III	ACNGT	5 cut(s)	96, 553, 649, 1226, 1735
HpyCH4IV	ACGT	3 cut(s)	129, 1140, 1353
HpyF10VI	GCNNNNNNNGC	9 cut(s)	112, 175, 184, 196, 364, 391, 532, 1522, 1664
HpyF3I	CTNAG	6 cut(s)	170, 772, 1346, 1445, 1526, 1668
HpySE526I	ACGT	3 cut(s)	129, 1140, 1353
Hsp92I	GRCGYC	2 cut(s)	72, 269
Hsp92II	CATG	2 cut(s)	533, 701
HspAI	GCGC	5 cut(s)	113, 121, 140, 365, 1523
Kpn2I	TCCGGA	1 cut(s)	324
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Ksp22I	TGATCA	1 cut(s)	754
LmnI	GCTCC	4 cut(s)	355, 390, 416, 1026
Lsp1109I	GCAGC	7 cut(s)	20, 199, 847, 869, 1097, 1525, 1670
LweI	GCATC	7 cut(s)	30, 1169, 1274, 1374, 1402, 1500, 1681
MaeI	CTAG	3 cut(s)	1391, 1460, 1623
MaeII	ACGT	3 cut(s)	129, 1140, 1353
MaeIII	GTNAC	4 cut(s)	130, 265, 369, 1349
MboII	GAAGA	8 cut(s)	617, 671, 682, 725, 838, 917, 1076, 1241
MflI	RGATCY	5 cut(s)	583, 676, 877, 1556, 1747
MhlI	GDGCHC	7 cut(s)	129, 387, 413, 491, 935, 1273, 1495
MluCI	AATT	8 cut(s)	495, 628, 654, 669, 716, 921, 1026, 1463
MlyI	GAGTC	6 cut(s)	50, 151, 302, 1174, 1582, 1763
MmeI	TCCRAC	2 cut(s)	372, 855
Mph1103I	ATGCAT	2 cut(s)	892, 1162
MroI	TCCGGA	1 cut(s)	324
MroNI	GCCGGC	1 cut(s)	29
MseI	TTAA	8 cut(s)	234, 300, 396, 566, 641, 920, 1632, 1764
MspA1I	CMGCKG	2 cut(s)	860, 1516
MspCI	CTTAAG	1 cut(s)	395
MspI	CCGG	7 cut(s)	30, 67, 184, 245, 325, 414, 1360
MspR9I	CCNGG	5 cut(s)	68, 353, 625, 1115, 1323
MvaI	CCWGG	4 cut(s)	353, 625, 1115, 1323
MvnI	CGCG	6 cut(s)	113, 121, 123, 140, 367, 375
MwoI	GCNNNNNNNGC	9 cut(s)	112, 175, 184, 196, 364, 391, 532, 1522, 1664
NaeI	GCCGGC	1 cut(s)	31
NciI	CCSGG	1 cut(s)	68
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	2 cut(s)	533, 701
NlaIV	GGNNCC	5 cut(s)	182, 730, 1022, 1558, 1749
NmeAIII	GCCGAG	2 cut(s)	243, 316
NmuCI	GTSAC	3 cut(s)	130, 265, 369
NsiI	ATGCAT	2 cut(s)	892, 1162
NspV	TTCGAA	1 cut(s)	1297
PaeR7I	CTCGAG	1 cut(s)	557
PceI	AGGCCT	1 cut(s)	314
PdiI	GCCGGC	1 cut(s)	31
PfeI	GAWTC	4 cut(s)	344, 594, 1406, 1615
PkrI	GCNGC	9 cut(s)	35, 189, 226, 377, 859, 862, 1112, 1515, 1660
PleI	GAGTC	6 cut(s)	50, 151, 301, 1174, 1582, 1762
PmaCI	CACGTG	1 cut(s)	130
PmlI	CACGTG	1 cut(s)	130
PpsI	GAGTC	6 cut(s)	50, 151, 301, 1174, 1582, 1762
Ppu21I	YACGTR	3 cut(s)	130, 1141, 1354
PpuMI	RGGWCCY	1 cut(s)	468
Psp124BI	GAGCTC	3 cut(s)	387, 491, 1273
Psp5II	RGGWCCY	1 cut(s)	468
Psp6I	CCWGG	4 cut(s)	351, 623, 1113, 1321
PspCI	CACGTG	1 cut(s)	130
PspGI	CCWGG	4 cut(s)	351, 623, 1113, 1321
PspN4I	GGNNCC	5 cut(s)	182, 730, 1022, 1558, 1749
PspPI	GGNCC	4 cut(s)	64, 468, 1357, 1709
PspPPI	RGGWCCY	1 cut(s)	468
PstI	CTGCAG	3 cut(s)	458, 1017, 1455
PstNI	CAGNNNCTG	1 cut(s)	1667
PsuI	RGATCY	5 cut(s)	583, 676, 877, 1556, 1747
PvuII	CAGCTG	2 cut(s)	860, 1516
RsaI	GTAC	7 cut(s)	101, 555, 770, 916, 1127, 1532, 1550
RsaNI	GTAC	7 cut(s)	100, 554, 769, 915, 1126, 1531, 1549
SacI	GAGCTC	3 cut(s)	387, 491, 1273
SaqAI	TTAA	8 cut(s)	234, 300, 396, 566, 641, 920, 1632, 1764
SatI	GCNGC	9 cut(s)	34, 188, 225, 376, 858, 861, 1111, 1514, 1659
Sau96I	GGNCC	4 cut(s)	64, 468, 1357, 1709
ScaI	AGTACT	2 cut(s)	770, 1127
SchI	GAGTC	6 cut(s)	50, 151, 302, 1174, 1582, 1763
ScrFI	CCNGG	5 cut(s)	68, 353, 625, 1115, 1323
SduI	GDGCHC	7 cut(s)	129, 387, 413, 491, 935, 1273, 1495
SfaNI	GCATC	7 cut(s)	30, 1169, 1274, 1374, 1402, 1500, 1681
SfcI	CTRYAG	3 cut(s)	454, 1013, 1451
Sfr274I	CTCGAG	1 cut(s)	557
SfuI	TTCGAA	1 cut(s)	1297
SinI	GGWCC	3 cut(s)	64, 468, 1709
SlaI	CTCGAG	1 cut(s)	557
SmlI	CTYRAG	5 cut(s)	191, 206, 395, 557, 950
SmoI	CTYRAG	5 cut(s)	191, 206, 395, 557, 950
Sse9I	AATT	8 cut(s)	495, 628, 654, 669, 716, 921, 1026, 1463
SseBI	AGGCCT	1 cut(s)	314
SsiI	CCGC	6 cut(s)	178, 224, 367, 375, 448, 694
SspI	AATATT	1 cut(s)	1606
SspMI	CTAG	3 cut(s)	1391, 1460, 1623
SstI	GAGCTC	3 cut(s)	387, 491, 1273
StuI	AGGCCT	1 cut(s)	314
StyD4I	CCNGG	5 cut(s)	66, 351, 623, 1113, 1321
StyI	CCWWGG	1 cut(s)	1743
TaaI	ACNGT	5 cut(s)	96, 553, 649, 1226, 1735
TaiI	ACGT	3 cut(s)	132, 1143, 1356
TasI	AATT	8 cut(s)	495, 628, 654, 669, 716, 921, 1026, 1463
TatI	WGTACW	4 cut(s)	553, 768, 914, 1125
TauI	GCSGC	2 cut(s)	227, 378
TfiI	GAWTC	4 cut(s)	344, 594, 1406, 1615
Tru1I	TTAA	8 cut(s)	234, 300, 396, 566, 641, 920, 1632, 1764
Tru9I	TTAA	8 cut(s)	234, 300, 396, 566, 641, 920, 1632, 1764
TscAI	CASTG	7 cut(s)	556, 652, 789, 907, 1500, 1512, 1668
TseFI	GTSAC	3 cut(s)	130, 265, 369
TseI	GCWGC	7 cut(s)	33, 187, 857, 860, 1110, 1513, 1658
Tsp45I	GTSAC	3 cut(s)	130, 265, 369
TspDTI	ATGAA	2 cut(s)	17, 846
TspGWI	ACGGA	2 cut(s)	596, 1307
TspRI	CASTG	7 cut(s)	556, 652, 789, 907, 1500, 1512, 1668
Vha464I	CTTAAG	1 cut(s)	395
VneI	GTGCAC	1 cut(s)	1491
VpaK11BI	GGWCC	3 cut(s)	64, 468, 1709
XapI	RAATTY	2 cut(s)	669, 716
XhoI	CTCGAG	1 cut(s)	557
XmiI	GTMKAC	1 cut(s)	1137
XspI	CTAG	3 cut(s)	1391, 1460, 1623
ZrmI	AGTACT	2 cut(s)	770, 1127
Zsp2I	ATGCAT	2 cut(s)	892, 1162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.