Rroxscaffold_4G00287710

Coronatine-insensitive protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005027
Physical Location & Seq
Forward (+)
8700645 .. 8704546
3902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00287710.1

Sequence Viewer

Length: 1728 bp
ATGGAAGATCGGAACGTGAGACTGAATACTGGAATGTCCGATGTGGTAGCCGGCTGCGTGATGCCGTATATCAAAGACTCGAAGGACCGCGACGCCGTGTCGTTGGTGTGCCGACGGTGGTACGAGCTGGACGCGCTCACGCGCGAGCACGTGACCATCGCGCTCTGCTACACGACGACTCCCGAGAGGCTCAGGAGGCGGTTCCGGCAGCTTAAGTCGCTGAAGCTGAAGGGGAAGCCGAGGGCGGCGATGTTTAATCTGATACCGGAGGATTGGGGAGGCTATGTGACGCCGTGGGTGGAGGAGATTGCGGAGTCGTTTAAGAGCTTGAAGGCCTTGCATTTCCGGAGAATGATTGTGAGGGATTCCGACCTGGAGCTATTGGCGCGGTCACGCGGCCGTGAGCTCCAATCGCTTAAGCTCGACAAGTGCTCCGGGTTTTCGACTGACGGCCTTGTCCACATCGCCCGCTTCTGCAGGGATTTGAGGACCTTGTTTTTGGAGGAGAGCTCGATAATTGAGAAAGAGGATGAGTGGGGTGAATGGCTACATGAGCTTGCTACAAACAACACTGTGCTCGAGACTTTAAACTTCTATATGACGGATCTTGGCAGAATCAGATTTGAAGACCTAGAACTCATAGCCAGGAATTGCCCCTCCTTAACCACTGTGAAAATTAGCGATTGTGAAATTTTGGATCTTCTGGGTTTCTTCCGTCATGCAACTGCTTTAGAAGAATTTTGTGGAGGTTCCTTCGATGATCGACCAGAGAATGATCAATCAGAGAAGTACTCAGTTGTATCACTGCCACGAAAGATATGTCTTTTGGGTCTAACGATGTTGGGGAAGAATGAAATGCCTATTGTATTCCCATTAGCAGCTGCTCTCAAAAAGTTGGATCTCCTATATGCATTGCTTGACACTGAAGACCATTGTACTTTAATTCAAAAGTGCCCCAACTTGGAAGTTCTTGAGACAAGGAATGTCATTGGAGATAGAGGTTTAGAAGTCCTTGCTCGGAGTTGCAAGAAACTGCAGAGGCTCCGAATTGAGCGAGGTGCTGATGAGCAAGGTATGGAGGACGAAGATGGTGTTGTTTCACAGAGGGGTCTGATGGCTTTGGCACAGGGCTGCCTGGAACTGGAGTACTTGGCTGTCTACGTATCAGATATCACAAATGCATCTCTGGAATACATTGGGACTCACTCTAAAAATCTAAATGATTTTCGCCTTGTCCTGCTTGACCGTGAAGAGACGATAACAGATTTACCACTTGACAATGGCGTTCGAGCTCTATTGAGGGGATGCCAAAAGCTTCGAAGTCAAAATGTGAGATGGATGCTTCTAGGTTATGTTGGTGAATCTGATGCAGGGCTTTTGGAGTTTTCAAAGGGTTGCCTTAGTCTGCAGAAACTAGAAATGAGGGGCTGTTGCTTCAGTGAGGGTGCACTGGCTGTTGCAGTGATGCAGCTGACTGCGCTAAGGTACTTGTGGGTGCAAGGGTACAGGGGATCCCCAACGGGTCGTGATCTTTTGGCAATGACTCGCCCGTATTGGAATATTGAGTTGATTCCTCCTAGACGAGTTAATGTTCTTGATCCGAACGGGGAGGCAGTAGTGGTTGAGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGACCAAGAACAGATTTTCCAAATACTGTTATCCCCTTGGATCCAGAGTCTTTGATTAACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009628 GO:0009639 GO:0009641 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009861 GO:0009867 GO:0009900 GO:0009901 GO:0009908 GO:0009909 GO:0009966 GO:0009987 GO:0010033 GO:0010118 GO:0010218 GO:0010498 GO:0010646 GO:0019538 GO:0019941 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0030163 GO:0031146 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045087 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080134 GO:0090567 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:2000022 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like

Protein Analysis

575

Amino Acids

65.26

Weight (kDa)

5.49

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 10 - 50 6.1e-22 F-box
Transp_inhibit PF18791 70 - 115 3.8e-23 Transport inhibitor response 1 protein domain
DUF7885 PF25372 101 - 409 6.9e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 455
AccI GTMKAC 1 cut(s) 1158
AccII CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
AccIII TCCGGA 1 cut(s) 345
AciI CCGC 7 cut(s) 88, 199, 245, 311, 388, 396, 469
AclWI GGATC 8 cut(s) 612, 705, 906, 1506, 1519, 1592, 1697, 1710
AcoI YGGCCR 1 cut(s) 397
AcsI RAATTY 2 cut(s) 690, 737
AcuI CTGAAG 4 cut(s) 242, 248, 945, 1420
AcvI CACGTG 1 cut(s) 151
AcyI GRCGYC 2 cut(s) 93, 290
AfaI GTAC 6 cut(s) 122, 791, 937, 1148, 1487, 1505
AfiI CCNNNNNNNGG 2 cut(s) 961, 1141
AflII CTTAAG 2 cut(s) 212, 416
AgsI TTSAA 4 cut(s) 331, 626, 947, 1389
AhdI GACNNNNNGTC 1 cut(s) 97
AjnI CCWGG 3 cut(s) 372, 644, 1134
AloI GAACNNNNNNTCC 2 cut(s) 1663, 1695
Alw21I GWGCWC 7 cut(s) 150, 408, 434, 512, 579, 1294, 1450
Alw26I GTCTC 4 cut(s) 13, 575, 968, 1247
Alw44I GTGCAC 1 cut(s) 1446
AlwI GGATC 8 cut(s) 612, 705, 906, 1506, 1519, 1592, 1697, 1710
Ama87I CYCGRG 2 cut(s) 182, 578
Aor13HI TCCGGA 1 cut(s) 345
AoxI GGCC 3 cut(s) 333, 397, 451
ApaLI GTGCAC 1 cut(s) 1446
ApeKI GCWGC 6 cut(s) 54, 208, 878, 881, 1131, 1468
ApoI RAATTY 2 cut(s) 690, 737
ArsI GACNNNNNNTTYG 4 cut(s) 481, 513, 805, 837
AspLEI GCGC 5 cut(s) 136, 144, 163, 388, 1480
AspS9I GGNCC 3 cut(s) 85, 489, 1664
AsuC2I CCSGG 1 cut(s) 436
AsuHPI GGTGA 2 cut(s) 551, 1370
AsuII TTCGAA 1 cut(s) 1318
AvaI CYCGRG 2 cut(s) 182, 578
AvaII GGWCC 3 cut(s) 85, 489, 1664
BaeGI GKGCMC 2 cut(s) 956, 1450
BamHI GGATCC 2 cut(s) 1511, 1702
BanII GRGCYC 3 cut(s) 408, 512, 1294
BbrPI CACGTG 1 cut(s) 151
BbsI GAAGAC 2 cut(s) 633, 933
Bbv12I GWGCWC 7 cut(s) 150, 408, 434, 512, 579, 1294, 1450
BbvI GCAGC 6 cut(s) 41, 220, 868, 890, 1118, 1480
BccI CCATC 4 cut(s) 164, 1082, 1108, 1329
BceAI ACGGC 5 cut(s) 49, 80, 277, 384, 466
BciT130I CCWGG 3 cut(s) 374, 646, 1136
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 1 cut(s) 436
BcoDI GTCTC 4 cut(s) 13, 575, 968, 1247
BfaI CTAG 4 cut(s) 632, 1346, 1415, 1578
BfmI CTRYAG 3 cut(s) 475, 1034, 1406
BfrI CTTAAG 2 cut(s) 212, 416
BisI GCNGC 8 cut(s) 55, 209, 246, 397, 879, 882, 1132, 1469
BlsI GCNGC 8 cut(s) 56, 210, 247, 398, 880, 883, 1133, 1470
BmcAI AGTACT 2 cut(s) 791, 1148
Bme1390I CCNGG 4 cut(s) 374, 436, 646, 1136
Bme18I GGWCC 3 cut(s) 85, 489, 1664
BmeRI GACNNNNNGTC 1 cut(s) 97
BmeT110I CYCGRG 2 cut(s) 182, 578
BmgT120I GGNCC 3 cut(s) 85, 489, 1664
BmiI GGNNCC 5 cut(s) 203, 751, 1043, 1513, 1704
BmrFI CCNGG 4 cut(s) 374, 436, 646, 1136
BmsI GCATC 7 cut(s) 51, 1190, 1295, 1329, 1357, 1455, 1636
BpiI GAAGAC 2 cut(s) 633, 933
BplI GAGNNNNNCTC 4 cut(s) 494, 526, 776, 808
BpmI CTGGAG 2 cut(s) 395, 1163
Bpu10I CCTNAGC 2 cut(s) 191, 1481
Bpu14I TTCGAA 1 cut(s) 1318
BpuEI CTTGAG 1 cut(s) 992
BpuMI CCSGG 1 cut(s) 436
BsaAI YACGTR 2 cut(s) 151, 1162
BsaHI GRCGYC 2 cut(s) 93, 290
BsaJI CCNNGG 3 cut(s) 239, 293, 1698
BsaWI WCCGGW 2 cut(s) 265, 345
BsaXI ACNNNNNCTCC 6 cut(s) 163, 193, 270, 300, 416, 446
Bsc4I CCNNNNNNNGG 2 cut(s) 961, 1141
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 34, 1146, 1455
Bse3DI GCAATG 2 cut(s) 911, 1545
BseAI TCCGGA 1 cut(s) 345
BseBI CCWGG 3 cut(s) 374, 646, 1136
BseDI CCNNGG 3 cut(s) 239, 293, 1698
BseGI GGATG 4 cut(s) 535, 1310, 1344, 1627
BseLI CCNNNNNNNGG 2 cut(s) 961, 1141
BseMI GCAATG 2 cut(s) 911, 1545
BseMII CTCAG 2 cut(s) 205, 807
BseNI ACTGG 3 cut(s) 34, 1146, 1455
BseRI GAGGAG 2 cut(s) 317, 518
BseSI GKGCMC 2 cut(s) 956, 1450
BseX3I CGGCCG 1 cut(s) 397
BseXI GCAGC 6 cut(s) 41, 220, 868, 890, 1118, 1480
Bsh1236I CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 3 cut(s) 335, 399, 453
BsiEI CGRYCG 1 cut(s) 400
BsiHKAI GWGCWC 7 cut(s) 150, 408, 434, 512, 579, 1294, 1450
BsiHKCI CYCGRG 2 cut(s) 182, 578
BsiSI CCGG 5 cut(s) 51, 205, 266, 346, 435
BslFI GGGAC 1 cut(s) 1213
BslI CCNNNNNNNGG 2 cut(s) 961, 1141
BsmAI GTCTC 4 cut(s) 13, 575, 968, 1247
BsmBI CGTCTC 1 cut(s) 1247
BsmFI GGGAC 1 cut(s) 1213
BsnI GGCC 3 cut(s) 335, 399, 453
BsoBI CYCGRG 2 cut(s) 182, 578
Bsp119I TTCGAA 1 cut(s) 1318
Bsp1286I GDGCHC 8 cut(s) 150, 408, 434, 512, 579, 956, 1294, 1450
Bsp13I TCCGGA 1 cut(s) 345
BspACI CCGC 7 cut(s) 88, 199, 245, 311, 388, 396, 469
BspANI GGCC 3 cut(s) 335, 399, 453
BspCNI CTCAG 2 cut(s) 204, 806
BspEI TCCGGA 1 cut(s) 345
BspFNI CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
BspLI GGNNCC 5 cut(s) 203, 751, 1043, 1513, 1704
BspMAI CTGCAG 3 cut(s) 479, 1038, 1410
BspPI GGATC 8 cut(s) 612, 705, 906, 1506, 1519, 1592, 1697, 1710
BspT104I TTCGAA 1 cut(s) 1318
BspTI CTTAAG 2 cut(s) 212, 416
BsrDI GCAATG 2 cut(s) 911, 1545
BsrFI RCCGGY 1 cut(s) 50
BsrI ACTGG 3 cut(s) 34, 1146, 1455
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 3 cut(s) 239, 293, 1698
BssNI GRCGYC 2 cut(s) 93, 290
BssT1I CCWWGG 1 cut(s) 1698
Bst2UI CCWGG 3 cut(s) 374, 646, 1136
Bst4CI ACNGT 5 cut(s) 117, 574, 670, 1247, 1690
Bst6I CTCTTC 1 cut(s) 1245
BstACI GRCGYC 2 cut(s) 93, 290
BstAFI CTTAAG 2 cut(s) 212, 416
BstBAI YACGTR 2 cut(s) 151, 1162
BstBI TTCGAA 1 cut(s) 1318
BstC8I GCNNGC 4 cut(s) 52, 146, 469, 558
BstDEI CTNAG 4 cut(s) 191, 793, 1400, 1481
BstDSI CCRYGG 1 cut(s) 293
BstF5I GGATG 4 cut(s) 535, 1310, 1344, 1627
BstFNI CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
BstHHI GCGC 5 cut(s) 136, 144, 163, 388, 1480
BstMAI GTCTC 4 cut(s) 13, 575, 968, 1247
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 8 cut(s) 133, 196, 205, 217, 385, 412, 553, 1477
BstNI CCWGG 3 cut(s) 374, 646, 1136
BstSCI CCNGG 4 cut(s) 372, 434, 644, 1134
BstSFI CTRYAG 3 cut(s) 475, 1034, 1406
BstSLI GKGCMC 2 cut(s) 956, 1450
BstSNI TACGTA 1 cut(s) 1162
BstUI CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
BstV1I GCAGC 6 cut(s) 41, 220, 868, 890, 1118, 1480
BstV2I GAAGAC 2 cut(s) 633, 933
BstX2I RGATCY 5 cut(s) 604, 697, 898, 1511, 1702
BstYI RGATCY 5 cut(s) 604, 697, 898, 1511, 1702
BstZI CGGCCG 1 cut(s) 397
BsuRI GGCC 3 cut(s) 335, 399, 453
BtgI CCRYGG 1 cut(s) 293
BtgZI GCGATG 3 cut(s) 142, 263, 448
BtsCI GGATG 4 cut(s) 535, 1310, 1344, 1627
BtsI GCAGTG 2 cut(s) 803, 1467
BtsIMutI CAGTG 7 cut(s) 570, 666, 803, 921, 1444, 1448, 1467
Cac8I GCNNGC 4 cut(s) 52, 146, 469, 558
CfoI GCGC 5 cut(s) 136, 144, 163, 388, 1480
Cfr10I RCCGGY 1 cut(s) 50
Cfr13I GGNCC 3 cut(s) 85, 489, 1664
CseI GACGC 3 cut(s) 101, 140, 298
Csp6I GTAC 6 cut(s) 121, 790, 936, 1147, 1486, 1504
CviAII CATG 2 cut(s) 551, 719
CviQI GTAC 6 cut(s) 121, 790, 936, 1147, 1486, 1504
DdeI CTNAG 4 cut(s) 191, 793, 1400, 1481
DraI TTTAAA 1 cut(s) 588
DrdI GACNNNNNNGTC 1 cut(s) 455
DriI GACNNNNNGTC 1 cut(s) 97
DseDI GACNNNNNNGTC 1 cut(s) 455
EaeI YGGCCR 1 cut(s) 397
EagI CGGCCG 1 cut(s) 397
Eam1104I CTCTTC 1 cut(s) 1245
Eam1105I GACNNNNNGTC 1 cut(s) 97
EarI CTCTTC 1 cut(s) 1245
Ecl136II GAGCTC 3 cut(s) 406, 510, 1292
EclXI CGGCCG 1 cut(s) 397
Eco105I TACGTA 1 cut(s) 1162
Eco130I CCWWGG 1 cut(s) 1698
Eco147I AGGCCT 1 cut(s) 335
Eco24I GRGCYC 3 cut(s) 408, 512, 1294
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 3 cut(s) 85, 489, 1664
Eco52I CGGCCG 1 cut(s) 397
Eco53kI GAGCTC 3 cut(s) 406, 510, 1292
Eco57I CTGAAG 4 cut(s) 242, 248, 945, 1420
Eco72I CACGTG 1 cut(s) 151
Eco88I CYCGRG 2 cut(s) 182, 578
EcoICRI GAGCTC 3 cut(s) 406, 510, 1292
EcoO109I RGGNCCY 1 cut(s) 489
EcoRII CCWGG 3 cut(s) 372, 644, 1134
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 1 cut(s) 1698
EcoT22I ATGCAT 2 cut(s) 913, 1183
EcoT38I GRGCYC 3 cut(s) 408, 512, 1294
ErhI CCWWGG 1 cut(s) 1698
Esp3I CGTCTC 1 cut(s) 1247
FaeI CATG 2 cut(s) 554, 722
FaqI GGGAC 1 cut(s) 1213
FatI CATG 2 cut(s) 550, 718
FauI CCCGC 1 cut(s) 476
FbaI TGATCA 1 cut(s) 775
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 8 cut(s) 55, 209, 246, 397, 879, 882, 1132, 1469
FokI GGATG 4 cut(s) 542, 1317, 1351, 1614
FriOI GRGCYC 3 cut(s) 408, 512, 1294
Fsp4HI GCNGC 8 cut(s) 55, 209, 246, 397, 879, 882, 1132, 1469
FspBI CTAG 4 cut(s) 632, 1346, 1415, 1578
GlaI GCGC 5 cut(s) 135, 143, 162, 387, 1479
GluI GCNGC 8 cut(s) 55, 209, 246, 397, 879, 882, 1132, 1469
GsuI CTGGAG 2 cut(s) 395, 1163
HaeIII GGCC 3 cut(s) 335, 399, 453
HapII CCGG 5 cut(s) 51, 205, 266, 346, 435
HgaI GACGC 3 cut(s) 101, 140, 298
HhaI GCGC 5 cut(s) 136, 144, 163, 388, 1480
Hin1I GRCGYC 2 cut(s) 93, 290
Hin1II CATG 2 cut(s) 554, 722
Hin6I GCGC 5 cut(s) 134, 142, 161, 386, 1478
HinP1I GCGC 5 cut(s) 134, 142, 161, 386, 1478
HindIII AAGCTT 1 cut(s) 1313
HpaII CCGG 5 cut(s) 51, 205, 266, 346, 435
HphI GGTGA 2 cut(s) 551, 1370
Hpy166II GTNNAC 3 cut(s) 460, 1159, 1448
Hpy188III TCNNGA 9 cut(s) 182, 193, 346, 580, 971, 1187, 1526, 1595, 1706
Hpy8I GTNNAC 3 cut(s) 460, 1159, 1448
Hpy99I CGWCG 3 cut(s) 95, 117, 178
HpyAV CCTTC 4 cut(s) 76, 223, 325, 763
HpyCH4III ACNGT 5 cut(s) 117, 574, 670, 1247, 1690
HpyCH4IV ACGT 3 cut(s) 15, 150, 1161
HpyF10VI GCNNNNNNNGC 8 cut(s) 133, 196, 205, 217, 385, 412, 553, 1477
HpyF3I CTNAG 4 cut(s) 191, 793, 1400, 1481
HpySE526I ACGT 3 cut(s) 15, 150, 1161
Hsp92I GRCGYC 2 cut(s) 93, 290
Hsp92II CATG 2 cut(s) 554, 722
HspAI GCGC 5 cut(s) 134, 142, 161, 386, 1478
Kpn2I TCCGGA 1 cut(s) 345
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 775
LmnI GCTCC 4 cut(s) 376, 411, 437, 1047
Lsp1109I GCAGC 6 cut(s) 41, 220, 868, 890, 1118, 1480
LweI GCATC 7 cut(s) 51, 1190, 1295, 1329, 1357, 1455, 1636
MaeI CTAG 4 cut(s) 632, 1346, 1415, 1578
MaeII ACGT 3 cut(s) 15, 150, 1161
MaeIII GTNAC 3 cut(s) 151, 286, 390
MboII GAAGA 9 cut(s) 17, 638, 692, 703, 746, 859, 938, 1097, 1262
MflI RGATCY 5 cut(s) 604, 697, 898, 1511, 1702
MhlI GDGCHC 8 cut(s) 150, 408, 434, 512, 579, 956, 1294, 1450
MluCI AATT 7 cut(s) 516, 649, 675, 690, 737, 942, 1047
MlyI GAGTC 6 cut(s) 71, 172, 323, 1195, 1537, 1718
MmeI TCCRAC 2 cut(s) 393, 876
Mph1103I ATGCAT 2 cut(s) 913, 1183
MroI TCCGGA 1 cut(s) 345
MroNI GCCGGC 1 cut(s) 50
MseI TTAA 9 cut(s) 213, 255, 321, 417, 587, 662, 941, 1587, 1719
MspA1I CMGCKG 2 cut(s) 881, 1471
MspCI CTTAAG 2 cut(s) 212, 416
MspI CCGG 5 cut(s) 51, 205, 266, 346, 435
MspR9I CCNGG 4 cut(s) 374, 436, 646, 1136
MvaI CCWGG 3 cut(s) 374, 646, 1136
MvnI CGCG 7 cut(s) 90, 134, 142, 144, 161, 388, 396
MwoI GCNNNNNNNGC 8 cut(s) 133, 196, 205, 217, 385, 412, 553, 1477
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 436
NgoMIV GCCGGC 1 cut(s) 50
NlaIII CATG 2 cut(s) 554, 722
NlaIV GGNNCC 5 cut(s) 203, 751, 1043, 1513, 1704
NmeAIII GCCGAG 1 cut(s) 264
NmuCI GTSAC 3 cut(s) 151, 286, 390
NsiI ATGCAT 2 cut(s) 913, 1183
NspV TTCGAA 1 cut(s) 1318
PaeR7I CTCGAG 1 cut(s) 578
PceI AGGCCT 1 cut(s) 335
PdiI GCCGGC 1 cut(s) 52
PfeI GAWTC 4 cut(s) 365, 615, 1361, 1570
PkrI GCNGC 8 cut(s) 56, 210, 247, 398, 880, 883, 1133, 1470
PleI GAGTC 6 cut(s) 71, 172, 322, 1195, 1537, 1717
PmaCI CACGTG 1 cut(s) 151
PmlI CACGTG 1 cut(s) 151
PpsI GAGTC 6 cut(s) 71, 172, 322, 1195, 1537, 1717
Ppu21I YACGTR 2 cut(s) 151, 1162
PpuMI RGGWCCY 1 cut(s) 489
Psp124BI GAGCTC 3 cut(s) 408, 512, 1294
Psp5II RGGWCCY 1 cut(s) 489
Psp6I CCWGG 3 cut(s) 372, 644, 1134
PspCI CACGTG 1 cut(s) 151
PspGI CCWGG 3 cut(s) 372, 644, 1134
PspN4I GGNNCC 5 cut(s) 203, 751, 1043, 1513, 1704
PspPI GGNCC 3 cut(s) 85, 489, 1664
PspPPI RGGWCCY 1 cut(s) 489
PstI CTGCAG 3 cut(s) 479, 1038, 1410
PsuI RGATCY 5 cut(s) 604, 697, 898, 1511, 1702
PvuII CAGCTG 2 cut(s) 881, 1471
RsaI GTAC 6 cut(s) 122, 791, 937, 1148, 1487, 1505
RsaNI GTAC 6 cut(s) 121, 790, 936, 1147, 1486, 1504
SacI GAGCTC 3 cut(s) 408, 512, 1294
SaqAI TTAA 9 cut(s) 213, 255, 321, 417, 587, 662, 941, 1587, 1719
SatI GCNGC 8 cut(s) 55, 209, 246, 397, 879, 882, 1132, 1469
Sau96I GGNCC 3 cut(s) 85, 489, 1664
ScaI AGTACT 2 cut(s) 791, 1148
SchI GAGTC 6 cut(s) 71, 172, 323, 1195, 1537, 1718
ScrFI CCNGG 4 cut(s) 374, 436, 646, 1136
SduI GDGCHC 8 cut(s) 150, 408, 434, 512, 579, 956, 1294, 1450
SfaNI GCATC 7 cut(s) 51, 1190, 1295, 1329, 1357, 1455, 1636
SfcI CTRYAG 3 cut(s) 475, 1034, 1406
Sfr274I CTCGAG 1 cut(s) 578
SfuI TTCGAA 1 cut(s) 1318
SinI GGWCC 3 cut(s) 85, 489, 1664
SlaI CTCGAG 1 cut(s) 578
SmlI CTYRAG 4 cut(s) 212, 416, 578, 971
SmoI CTYRAG 4 cut(s) 212, 416, 578, 971
SnaBI TACGTA 1 cut(s) 1162
Sse9I AATT 7 cut(s) 516, 649, 675, 690, 737, 942, 1047
SseBI AGGCCT 1 cut(s) 335
SsiI CCGC 7 cut(s) 88, 199, 245, 311, 388, 396, 469
SspI AATATT 1 cut(s) 1561
SspMI CTAG 4 cut(s) 632, 1346, 1415, 1578
SstI GAGCTC 3 cut(s) 408, 512, 1294
StuI AGGCCT 1 cut(s) 335
StyD4I CCNGG 4 cut(s) 372, 434, 644, 1134
StyI CCWWGG 1 cut(s) 1698
TaaI ACNGT 5 cut(s) 117, 574, 670, 1247, 1690
TaiI ACGT 3 cut(s) 18, 153, 1164
TaqI TCGA 9 cut(s) 80, 423, 443, 512, 579, 756, 763, 1288, 1318
TasI AATT 7 cut(s) 516, 649, 675, 690, 737, 942, 1047
TatI WGTACW 3 cut(s) 789, 935, 1146
TauI GCSGC 2 cut(s) 248, 399
TfiI GAWTC 4 cut(s) 365, 615, 1361, 1570
Tru1I TTAA 9 cut(s) 213, 255, 321, 417, 587, 662, 941, 1587, 1719
Tru9I TTAA 9 cut(s) 213, 255, 321, 417, 587, 662, 941, 1587, 1719
TscAI CASTG 7 cut(s) 577, 673, 810, 928, 1444, 1455, 1467
TseFI GTSAC 3 cut(s) 151, 286, 390
TseI GCWGC 6 cut(s) 54, 208, 878, 881, 1131, 1468
Tsp45I GTSAC 3 cut(s) 151, 286, 390
TspDTI ATGAA 1 cut(s) 867
TspGWI ACGGA 2 cut(s) 617, 704
TspRI CASTG 7 cut(s) 577, 673, 810, 928, 1444, 1455, 1467
Vha464I CTTAAG 2 cut(s) 212, 416
VneI GTGCAC 1 cut(s) 1446
VpaK11BI GGWCC 3 cut(s) 85, 489, 1664
XapI RAATTY 2 cut(s) 690, 737
XhoI CTCGAG 1 cut(s) 578
XmiI GTMKAC 1 cut(s) 1158
XspI CTAG 4 cut(s) 632, 1346, 1415, 1578
ZrmI AGTACT 2 cut(s) 791, 1148
Zsp2I ATGCAT 2 cut(s) 913, 1183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.