RLG00000027135

Coronatine-insensitive protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0005027
Physical Location & Seq
Forward (+)
8868414 .. 8871810
3397 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027135

Sequence Viewer

Length: 1773 bp
ATGAATACTGGAATGTCCGATGTGGTAGCCGGCTGCGTTATGCCGTATATCAAAGACTCGAAGGACCGGGACGCCGTGTCGTTGGTGTGCCGACGGTGGTACGAGCTGGACGCGCTCACGCGCGAGCACGTGACCATCGCGCTCTGCTACACGACGACTCCCGAGCGGCTCAGGAGGCGGTTCCGGCAGCTCAAGTCGCTGAAGCTCAAGGGGAAGCCGAGAGCGGCGATGTTTAATCTGATACCGGAGGATTGGGGAGGCTTTGTGACGCCGTGGGTGGAGGAGATTGCCGAGTCGTTTAAGAGCTTGAAGGCCTTGCATTTCCGGAGAATGATTGTGAGGGATTCCGACTTGGAGCTGTTGGCGCGGTCACGCGGCCGTGAGCTCCAATCGCTTAAGCTCGACAAGTGCTCCGGGTTTTCGACTGACGGTCTTGTCCACATCGCCCGCTTCTGCAGGGATTTGAGGACCTTGTTTTTGGAGGAGAGCTCGATAATTGAGAAAGAGGATGAGTGGGGTGAATGGCTACATGAACTTGCTACAAACAACACTGTACTCGAGACTTTAAACTTCTATATGACGGATCTTGGCAGAATCAGATTTGAAGACCTCGAACTCATAGCCAGGAATTGCCCCTCCTTAACCACTGTGAAAATTAGCGATTGTGAAATTTTGGATCTTCTGGGTTTCTTCCGTCATGCAACTGCTTTAGAAGAATTTTGTGGAGGTTCCTTCGATGATCGACCAGAGAATGATCAATCAGAGAAGTACTCAGTTGTATCACTGCCACGAAGGATATGTCTTTTGGGTCTAACGATGTTGGGGAAGAATGAAATGCCTATTGTATTCCCATTAGCAGCTGCTCTCAAAAAGTTGGATCTCCTCTATGCATTGCTCGACACTGAAGACCATTGTACTTTAATTCAAAAGTGCCCCAACTTGGAAGTTCTTGAGACAAGGAATGTCATTGGAGATAGAGGATTAGAAGTCCTTGCTCGGAGTTGCAAGAGACTGAAGAGGCTCCGAATTGAACGAGGTGCTGATGAGCAAGGTATGGAGGACGAAGATGGTGTTGTTTCACAGAGGGGTCTGATGGCTTTGGCACAGGGCTGCCTGGAACTGGAGTACTTGGCTGTCTACGTATCAGATATCACAAATGCATCTCTGGAATACATTGGGACTCACTCTAAAAATCTAAATGATTTTCGCCTTGTCCTGCTTGACCGTGAAGAGACGATAACAGATTTACCACTTGACAATGGCGTTCGAGCTCTATTGAGGGGATGCCAAAAGCTTCGAAGGTTTGCTTTGTATCTCCGTCCTGGGGGTTTGACTGATTTGGGCCTTAGTTACGTGGGCCAGTATAGTCAAAATGTGAGATGGATGCTTCTAGGTTATGTTGGTGAATCTGATGCAGGGCTTTTGGAGTTTTCAAAGGGTTGCCTTAGTCTGCAGAAACTAGAAATGAGGGGCTGTTGCTTCAGTGAGGGTGCACTGGCTGTTGCAGTGATGCAGCTGACTGCGCTAAGGTACTTGTGGGTGCAAGGGTACAGGGGATCCTCAACGGGTCGTGATCTTTTGGCAATGGCTCGCCCGTATTGGAATATTGAGTTGATTCCTCCTAGACGAGTTAATGTTCTTGATCCGAACGGGGAGGCAGTAGTGGCTGAGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGACCAAGAACAGATTTTCCAAGTACTGTTATCCCCTTGGATCCAGAGTCTTTGATTAACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009628 GO:0009639 GO:0009641 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009861 GO:0009867 GO:0009900 GO:0009901 GO:0009908 GO:0009909 GO:0009966 GO:0009987 GO:0010033 GO:0010118 GO:0010218 GO:0010498 GO:0010646 GO:0019538 GO:0019941 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0030163 GO:0031146 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045087 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080134 GO:0090567 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:2000022 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like

Protein Analysis

591

Amino Acids

66.77

Weight (kDa)

5.63

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 3 - 43 6.3e-22 F-box
Transp_inhibit PF18791 63 - 108 1.3e-22 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 434
AccBSI CCGCTC 2 cut(s) 166, 224
AccI GTMKAC 1 cut(s) 1137
AccII CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
AccIII TCCGGA 1 cut(s) 324
AciI CCGC 6 cut(s) 166, 178, 224, 367, 375, 448
AclWI GGATC 8 cut(s) 591, 684, 885, 1551, 1564, 1637, 1742, 1755
AcoI YGGCCR 1 cut(s) 376
AcsI RAATTY 2 cut(s) 669, 716
AcuI CTGAAG 4 cut(s) 221, 924, 1034, 1465
AcvI CACGTG 1 cut(s) 130
AcyI GRCGYC 2 cut(s) 72, 269
AfaI GTAC 8 cut(s) 101, 555, 770, 916, 1127, 1532, 1550, 1732
AfiI CCNNNNNNNGG 3 cut(s) 940, 1120, 1324
AflII CTTAAG 1 cut(s) 395
AgsI TTSAA 5 cut(s) 310, 605, 926, 1031, 1434
AhdI GACNNNNNGTC 2 cut(s) 76, 429
AjnI CCWGG 3 cut(s) 623, 1113, 1321
AloI GAACNNNNNNTCC 2 cut(s) 1708, 1740
Alw21I GWGCWC 6 cut(s) 129, 387, 413, 491, 1273, 1495
Alw26I GTCTC 4 cut(s) 554, 947, 1003, 1226
Alw44I GTGCAC 1 cut(s) 1491
AlwI GGATC 8 cut(s) 591, 684, 885, 1551, 1564, 1637, 1742, 1755
Ama87I CYCGRG 2 cut(s) 161, 557
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 4 cut(s) 312, 376, 1342, 1357
ApaLI GTGCAC 1 cut(s) 1491
ApeKI GCWGC 6 cut(s) 33, 187, 857, 860, 1110, 1513
ApoI RAATTY 2 cut(s) 669, 716
ArsI GACNNNNNNTTYG 4 cut(s) 460, 492, 784, 816
AspLEI GCGC 5 cut(s) 115, 123, 142, 367, 1525
AspS9I GGNCC 5 cut(s) 64, 468, 1342, 1357, 1709
AsuC2I CCSGG 2 cut(s) 68, 415
AsuHPI GGTGA 2 cut(s) 530, 1415
AsuII TTCGAA 1 cut(s) 1297
AvaI CYCGRG 2 cut(s) 161, 557
AvaII GGWCC 3 cut(s) 64, 468, 1709
BaeGI GKGCMC 2 cut(s) 935, 1495
BamHI GGATCC 2 cut(s) 1556, 1747
BanII GRGCYC 3 cut(s) 387, 491, 1273
BbrPI CACGTG 1 cut(s) 130
BbsI GAAGAC 2 cut(s) 612, 912
Bbv12I GWGCWC 6 cut(s) 129, 387, 413, 491, 1273, 1495
BbvI GCAGC 6 cut(s) 20, 199, 847, 869, 1097, 1525
BccI CCATC 4 cut(s) 143, 1061, 1087, 1374
BceAI ACGGC 4 cut(s) 28, 59, 256, 363
BciT130I CCWGG 3 cut(s) 625, 1115, 1323
BclI TGATCA 1 cut(s) 754
BcnI CCSGG 2 cut(s) 68, 415
BcoDI GTCTC 4 cut(s) 554, 947, 1003, 1226
BfaI CTAG 3 cut(s) 1391, 1460, 1623
BfmI CTRYAG 2 cut(s) 454, 1451
BfrI CTTAAG 1 cut(s) 395
BisI GCNGC 9 cut(s) 34, 167, 188, 225, 376, 858, 861, 1111, 1514
BlpI GCTNAGC 1 cut(s) 1668
BlsI GCNGC 9 cut(s) 35, 168, 189, 226, 377, 859, 862, 1112, 1515
BmcAI AGTACT 3 cut(s) 770, 1127, 1732
Bme1390I CCNGG 5 cut(s) 68, 415, 625, 1115, 1323
Bme18I GGWCC 3 cut(s) 64, 468, 1709
BmeRI GACNNNNNGTC 2 cut(s) 76, 429
BmeT110I CYCGRG 2 cut(s) 161, 557
BmgT120I GGNCC 5 cut(s) 64, 468, 1342, 1357, 1709
BmiI GGNNCC 5 cut(s) 182, 730, 1022, 1558, 1749
BmrFI CCNGG 5 cut(s) 68, 415, 625, 1115, 1323
BmsI GCATC 6 cut(s) 1169, 1274, 1374, 1402, 1500, 1681
BpiI GAAGAC 2 cut(s) 612, 912
BplI GAGNNNNNCTC 4 cut(s) 473, 505, 755, 787
BpmI CTGGAG 1 cut(s) 1142
Bpu10I CCTNAGC 2 cut(s) 170, 1526
Bpu1102I GCTNAGC 1 cut(s) 1668
Bpu14I TTCGAA 1 cut(s) 1297
BpuEI CTTGAG 3 cut(s) 176, 191, 971
BpuMI CCSGG 2 cut(s) 68, 415
BsaAI YACGTR 3 cut(s) 130, 1141, 1354
BsaHI GRCGYC 2 cut(s) 72, 269
BsaJI CCNNGG 3 cut(s) 272, 1322, 1743
BsaWI WCCGGW 2 cut(s) 244, 324
BsaXI ACNNNNNCTCC 6 cut(s) 142, 172, 249, 279, 395, 425
Bsc4I CCNNNNNNNGG 3 cut(s) 940, 1120, 1324
Bse118I RCCGGY 1 cut(s) 29
Bse1I ACTGG 4 cut(s) 13, 1125, 1360, 1500
Bse3DI GCAATG 2 cut(s) 890, 1590
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 3 cut(s) 625, 1115, 1323
BseDI CCNNGG 3 cut(s) 272, 1322, 1743
BseGI GGATG 4 cut(s) 514, 1289, 1389, 1672
BseLI CCNNNNNNNGG 3 cut(s) 940, 1120, 1324
BseMI GCAATG 2 cut(s) 890, 1590
BseMII CTCAG 3 cut(s) 184, 786, 1659
BseNI ACTGG 4 cut(s) 13, 1125, 1360, 1500
BseRI GAGGAG 3 cut(s) 296, 497, 872
BseSI GKGCMC 2 cut(s) 935, 1495
BseX3I CGGCCG 1 cut(s) 376
BseXI GCAGC 6 cut(s) 20, 199, 847, 869, 1097, 1525
Bsh1236I CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
Bsh1285I CGRYCG 1 cut(s) 379
BshFI GGCC 4 cut(s) 314, 378, 1344, 1359
BsiEI CGRYCG 1 cut(s) 379
BsiHKAI GWGCWC 6 cut(s) 129, 387, 413, 491, 1273, 1495
BsiHKCI CYCGRG 2 cut(s) 161, 557
BsiSI CCGG 6 cut(s) 30, 67, 184, 245, 325, 414
BslFI GGGAC 2 cut(s) 83, 1192
BslI CCNNNNNNNGG 3 cut(s) 940, 1120, 1324
BsmAI GTCTC 4 cut(s) 554, 947, 1003, 1226
BsmBI CGTCTC 1 cut(s) 1226
BsmFI GGGAC 2 cut(s) 83, 1192
BsnI GGCC 4 cut(s) 314, 378, 1344, 1359
BsoBI CYCGRG 2 cut(s) 161, 557
Bsp119I TTCGAA 1 cut(s) 1297
Bsp1286I GDGCHC 7 cut(s) 129, 387, 413, 491, 935, 1273, 1495
Bsp13I TCCGGA 1 cut(s) 324
Bsp143I GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
Bsp1720I GCTNAGC 1 cut(s) 1668
BspACI CCGC 6 cut(s) 166, 178, 224, 367, 375, 448
BspANI GGCC 4 cut(s) 314, 378, 1344, 1359
BspCNI CTCAG 3 cut(s) 183, 785, 1660
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
BspLI GGNNCC 5 cut(s) 182, 730, 1022, 1558, 1749
BspMAI CTGCAG 2 cut(s) 458, 1455
BspPI GGATC 8 cut(s) 591, 684, 885, 1551, 1564, 1637, 1742, 1755
BspT104I TTCGAA 1 cut(s) 1297
BspTI CTTAAG 1 cut(s) 395
BsrBI CCGCTC 2 cut(s) 166, 224
BsrDI GCAATG 2 cut(s) 890, 1590
BsrFI RCCGGY 1 cut(s) 29
BsrI ACTGG 4 cut(s) 13, 1125, 1360, 1500
BssAI RCCGGY 1 cut(s) 29
BssECI CCNNGG 3 cut(s) 272, 1322, 1743
BssMI GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
BssNI GRCGYC 2 cut(s) 72, 269
BssT1I CCWWGG 1 cut(s) 1743
Bst2UI CCWGG 3 cut(s) 625, 1115, 1323
Bst4CI ACNGT 6 cut(s) 96, 431, 553, 649, 1226, 1735
Bst6I CTCTTC 2 cut(s) 1010, 1224
BstACI GRCGYC 2 cut(s) 72, 269
BstAFI CTTAAG 1 cut(s) 395
BstBAI YACGTR 3 cut(s) 130, 1141, 1354
BstBI TTCGAA 1 cut(s) 1297
BstC8I GCNNGC 4 cut(s) 31, 125, 448, 1591
BstDEI CTNAG 6 cut(s) 170, 772, 1346, 1445, 1526, 1668
BstDSI CCRYGG 1 cut(s) 272
BstF5I GGATG 4 cut(s) 514, 1289, 1389, 1672
BstFNI CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
BstHHI GCGC 5 cut(s) 115, 123, 142, 367, 1525
BstKTI GATC 9 cut(s) 586, 679, 742, 757, 880, 1559, 1576, 1645, 1750
BstMAI GTCTC 4 cut(s) 554, 947, 1003, 1226
BstMBI GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
BstMCI CGRYCG 1 cut(s) 379
BstMWI GCNNNNNNNGC 8 cut(s) 112, 175, 184, 196, 364, 391, 1522, 1664
BstNI CCWGG 3 cut(s) 625, 1115, 1323
BstSCI CCNGG 5 cut(s) 66, 413, 623, 1113, 1321
BstSFI CTRYAG 2 cut(s) 454, 1451
BstSLI GKGCMC 2 cut(s) 935, 1495
BstSNI TACGTA 1 cut(s) 1141
BstUI CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
BstV1I GCAGC 6 cut(s) 20, 199, 847, 869, 1097, 1525
BstV2I GAAGAC 2 cut(s) 612, 912
BstX2I RGATCY 5 cut(s) 583, 676, 877, 1556, 1747
BstYI RGATCY 5 cut(s) 583, 676, 877, 1556, 1747
BstZI CGGCCG 1 cut(s) 376
BsuRI GGCC 4 cut(s) 314, 378, 1344, 1359
BtgI CCRYGG 1 cut(s) 272
BtgZI GCGATG 3 cut(s) 121, 242, 427
BtsCI GGATG 4 cut(s) 514, 1289, 1389, 1672
BtsI GCAGTG 2 cut(s) 782, 1512
BtsIMutI CAGTG 7 cut(s) 549, 645, 782, 900, 1489, 1493, 1512
Cac8I GCNNGC 4 cut(s) 31, 125, 448, 1591
CfoI GCGC 5 cut(s) 115, 123, 142, 367, 1525
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 5 cut(s) 64, 468, 1342, 1357, 1709
CseI GACGC 3 cut(s) 80, 119, 277
Csp6I GTAC 8 cut(s) 100, 554, 769, 915, 1126, 1531, 1549, 1731
CviAII CATG 2 cut(s) 530, 698
CviQI GTAC 8 cut(s) 100, 554, 769, 915, 1126, 1531, 1549, 1731
DdeI CTNAG 6 cut(s) 170, 772, 1346, 1445, 1526, 1668
DpnI GATC 9 cut(s) 585, 678, 741, 756, 879, 1558, 1575, 1644, 1749
DpnII GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
DraI TTTAAA 1 cut(s) 567
DrdI GACNNNNNNGTC 1 cut(s) 434
DriI GACNNNNNGTC 2 cut(s) 76, 429
DseDI GACNNNNNNGTC 1 cut(s) 434
EaeI YGGCCR 1 cut(s) 376
EagI CGGCCG 1 cut(s) 376
Eam1104I CTCTTC 2 cut(s) 1010, 1224
Eam1105I GACNNNNNGTC 2 cut(s) 76, 429
EarI CTCTTC 2 cut(s) 1010, 1224
Ecl136II GAGCTC 3 cut(s) 385, 489, 1271
EclXI CGGCCG 1 cut(s) 376
Eco105I TACGTA 1 cut(s) 1141
Eco130I CCWWGG 1 cut(s) 1743
Eco147I AGGCCT 1 cut(s) 314
Eco24I GRGCYC 3 cut(s) 387, 491, 1273
Eco32I GATATC 1 cut(s) 1150
Eco47I GGWCC 3 cut(s) 64, 468, 1709
Eco52I CGGCCG 1 cut(s) 376
Eco53kI GAGCTC 3 cut(s) 385, 489, 1271
Eco57I CTGAAG 4 cut(s) 221, 924, 1034, 1465
Eco72I CACGTG 1 cut(s) 130
Eco88I CYCGRG 2 cut(s) 161, 557
EcoICRI GAGCTC 3 cut(s) 385, 489, 1271
EcoO109I RGGNCCY 1 cut(s) 468
EcoRII CCWGG 3 cut(s) 623, 1113, 1321
EcoRV GATATC 1 cut(s) 1150
EcoT14I CCWWGG 1 cut(s) 1743
EcoT22I ATGCAT 2 cut(s) 892, 1162
EcoT38I GRGCYC 3 cut(s) 387, 491, 1273
ErhI CCWWGG 1 cut(s) 1743
Esp3I CGTCTC 1 cut(s) 1226
FaeI CATG 2 cut(s) 533, 701
FalI AAGNNNNNCTT 2 cut(s) 1291, 1323
FaqI GGGAC 2 cut(s) 83, 1192
FatI CATG 2 cut(s) 529, 697
FauI CCCGC 1 cut(s) 455
FbaI TGATCA 1 cut(s) 754
FblI GTMKAC 1 cut(s) 1137
Fnu4HI GCNGC 9 cut(s) 34, 167, 188, 225, 376, 858, 861, 1111, 1514
FokI GGATG 4 cut(s) 521, 1296, 1396, 1659
FriOI GRGCYC 3 cut(s) 387, 491, 1273
Fsp4HI GCNGC 9 cut(s) 34, 167, 188, 225, 376, 858, 861, 1111, 1514
FspBI CTAG 3 cut(s) 1391, 1460, 1623
GlaI GCGC 5 cut(s) 114, 122, 141, 366, 1524
GluI GCNGC 9 cut(s) 34, 167, 188, 225, 376, 858, 861, 1111, 1514
GsuI CTGGAG 1 cut(s) 1142
HaeIII GGCC 4 cut(s) 314, 378, 1344, 1359
HapII CCGG 6 cut(s) 30, 67, 184, 245, 325, 414
HgaI GACGC 3 cut(s) 80, 119, 277
HhaI GCGC 5 cut(s) 115, 123, 142, 367, 1525
Hin1I GRCGYC 2 cut(s) 72, 269
Hin1II CATG 2 cut(s) 533, 701
Hin6I GCGC 5 cut(s) 113, 121, 140, 365, 1523
HinP1I GCGC 5 cut(s) 113, 121, 140, 365, 1523
HindIII AAGCTT 1 cut(s) 1292
HinfI GANTC 9 cut(s) 56, 157, 293, 344, 594, 1180, 1406, 1615, 1754
HpaII CCGG 6 cut(s) 30, 67, 184, 245, 325, 414
HphI GGTGA 2 cut(s) 530, 1415
Hpy166II GTNNAC 3 cut(s) 439, 1138, 1493
Hpy188III TCNNGA 9 cut(s) 161, 172, 325, 559, 950, 1166, 1571, 1640, 1751
Hpy8I GTNNAC 3 cut(s) 439, 1138, 1493
Hpy99I CGWCG 2 cut(s) 96, 157
HpyAV CCTTC 5 cut(s) 55, 304, 742, 786, 1293
HpyCH4III ACNGT 6 cut(s) 96, 431, 553, 649, 1226, 1735
HpyCH4IV ACGT 3 cut(s) 129, 1140, 1353
HpyF10VI GCNNNNNNNGC 8 cut(s) 112, 175, 184, 196, 364, 391, 1522, 1664
HpyF3I CTNAG 6 cut(s) 170, 772, 1346, 1445, 1526, 1668
HpySE526I ACGT 3 cut(s) 129, 1140, 1353
Hsp92I GRCGYC 2 cut(s) 72, 269
Hsp92II CATG 2 cut(s) 533, 701
HspAI GCGC 5 cut(s) 113, 121, 140, 365, 1523
Kpn2I TCCGGA 1 cut(s) 324
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
Ksp22I TGATCA 1 cut(s) 754
Kzo9I GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
LmnI GCTCC 4 cut(s) 355, 390, 416, 1026
Lsp1109I GCAGC 6 cut(s) 20, 199, 847, 869, 1097, 1525
LweI GCATC 6 cut(s) 1169, 1274, 1374, 1402, 1500, 1681
MaeI CTAG 3 cut(s) 1391, 1460, 1623
MaeII ACGT 3 cut(s) 129, 1140, 1353
MaeIII GTNAC 4 cut(s) 130, 265, 369, 1349
MalI GATC 9 cut(s) 585, 678, 741, 756, 879, 1558, 1575, 1644, 1749
MbiI CCGCTC 2 cut(s) 166, 224
MboI GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
MboII GAAGA 9 cut(s) 617, 671, 682, 725, 838, 917, 1027, 1076, 1241
MflI RGATCY 5 cut(s) 583, 676, 877, 1556, 1747
MhlI GDGCHC 7 cut(s) 129, 387, 413, 491, 935, 1273, 1495
MluCI AATT 7 cut(s) 495, 628, 654, 669, 716, 921, 1026
MlyI GAGTC 5 cut(s) 50, 151, 302, 1174, 1763
MmeI TCCRAC 2 cut(s) 372, 855
Mph1103I ATGCAT 2 cut(s) 892, 1162
MroI TCCGGA 1 cut(s) 324
MroNI GCCGGC 1 cut(s) 29
MseI TTAA 8 cut(s) 234, 300, 396, 566, 641, 920, 1632, 1764
MspA1I CMGCKG 2 cut(s) 860, 1516
MspCI CTTAAG 1 cut(s) 395
MspI CCGG 6 cut(s) 30, 67, 184, 245, 325, 414
MspR9I CCNGG 5 cut(s) 68, 415, 625, 1115, 1323
MvaI CCWGG 3 cut(s) 625, 1115, 1323
MvnI CGCG 6 cut(s) 113, 121, 123, 140, 367, 375
MwoI GCNNNNNNNGC 8 cut(s) 112, 175, 184, 196, 364, 391, 1522, 1664
NaeI GCCGGC 1 cut(s) 31
NciI CCSGG 2 cut(s) 68, 415
NdeII GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
NgoMIV GCCGGC 1 cut(s) 29
NlaIII CATG 2 cut(s) 533, 701
NlaIV GGNNCC 5 cut(s) 182, 730, 1022, 1558, 1749
NmeAIII GCCGAG 2 cut(s) 243, 316
NmuCI GTSAC 3 cut(s) 130, 265, 369
NsiI ATGCAT 2 cut(s) 892, 1162
NspV TTCGAA 1 cut(s) 1297
PaeR7I CTCGAG 1 cut(s) 557
PceI AGGCCT 1 cut(s) 314
PdiI GCCGGC 1 cut(s) 31
PfeI GAWTC 4 cut(s) 344, 594, 1406, 1615
PkrI GCNGC 9 cut(s) 35, 168, 189, 226, 377, 859, 862, 1112, 1515
PleI GAGTC 5 cut(s) 50, 151, 301, 1174, 1762
PmaCI CACGTG 1 cut(s) 130
PmlI CACGTG 1 cut(s) 130
PpsI GAGTC 5 cut(s) 50, 151, 301, 1174, 1762
Ppu21I YACGTR 3 cut(s) 130, 1141, 1354
PpuMI RGGWCCY 1 cut(s) 468
Psp124BI GAGCTC 3 cut(s) 387, 491, 1273
Psp5II RGGWCCY 1 cut(s) 468
Psp6I CCWGG 3 cut(s) 623, 1113, 1321
PspCI CACGTG 1 cut(s) 130
PspGI CCWGG 3 cut(s) 623, 1113, 1321
PspN4I GGNNCC 5 cut(s) 182, 730, 1022, 1558, 1749
PspPI GGNCC 5 cut(s) 64, 468, 1342, 1357, 1709
PspPPI RGGWCCY 1 cut(s) 468
PstI CTGCAG 2 cut(s) 458, 1455
PsuI RGATCY 5 cut(s) 583, 676, 877, 1556, 1747
PvuII CAGCTG 2 cut(s) 860, 1516
RsaI GTAC 8 cut(s) 101, 555, 770, 916, 1127, 1532, 1550, 1732
RsaNI GTAC 8 cut(s) 100, 554, 769, 915, 1126, 1531, 1549, 1731
SacI GAGCTC 3 cut(s) 387, 491, 1273
SaqAI TTAA 8 cut(s) 234, 300, 396, 566, 641, 920, 1632, 1764
SatI GCNGC 9 cut(s) 34, 167, 188, 225, 376, 858, 861, 1111, 1514
Sau3AI GATC 9 cut(s) 583, 676, 739, 754, 877, 1556, 1573, 1642, 1747
Sau96I GGNCC 5 cut(s) 64, 468, 1342, 1357, 1709
ScaI AGTACT 3 cut(s) 770, 1127, 1732
SchI GAGTC 5 cut(s) 50, 151, 302, 1174, 1763
ScrFI CCNGG 5 cut(s) 68, 415, 625, 1115, 1323
SduI GDGCHC 7 cut(s) 129, 387, 413, 491, 935, 1273, 1495
SfaNI GCATC 6 cut(s) 1169, 1274, 1374, 1402, 1500, 1681
SfcI CTRYAG 2 cut(s) 454, 1451
Sfr274I CTCGAG 1 cut(s) 557
SfuI TTCGAA 1 cut(s) 1297
SinI GGWCC 3 cut(s) 64, 468, 1709
SlaI CTCGAG 1 cut(s) 557
SmlI CTYRAG 5 cut(s) 191, 206, 395, 557, 950
SmoI CTYRAG 5 cut(s) 191, 206, 395, 557, 950
SnaBI TACGTA 1 cut(s) 1141
Sse9I AATT 7 cut(s) 495, 628, 654, 669, 716, 921, 1026
SseBI AGGCCT 1 cut(s) 314
SsiI CCGC 6 cut(s) 166, 178, 224, 367, 375, 448
SspI AATATT 1 cut(s) 1606
SspMI CTAG 3 cut(s) 1391, 1460, 1623
SstI GAGCTC 3 cut(s) 387, 491, 1273
StuI AGGCCT 1 cut(s) 314
StyD4I CCNGG 5 cut(s) 66, 413, 623, 1113, 1321
StyI CCWWGG 1 cut(s) 1743
TaaI ACNGT 6 cut(s) 96, 431, 553, 649, 1226, 1735
TaiI ACGT 3 cut(s) 132, 1143, 1356
TasI AATT 7 cut(s) 495, 628, 654, 669, 716, 921, 1026
TatI WGTACW 5 cut(s) 553, 768, 914, 1125, 1730
TauI GCSGC 3 cut(s) 169, 227, 378
TfiI GAWTC 4 cut(s) 344, 594, 1406, 1615
Tru1I TTAA 8 cut(s) 234, 300, 396, 566, 641, 920, 1632, 1764
Tru9I TTAA 8 cut(s) 234, 300, 396, 566, 641, 920, 1632, 1764
TscAI CASTG 7 cut(s) 556, 652, 789, 907, 1489, 1500, 1512
TseFI GTSAC 3 cut(s) 130, 265, 369
TseI GCWGC 6 cut(s) 33, 187, 857, 860, 1110, 1513
Tsp45I GTSAC 3 cut(s) 130, 265, 369
TspDTI ATGAA 3 cut(s) 17, 546, 846
TspGWI ACGGA 3 cut(s) 596, 683, 1307
TspRI CASTG 7 cut(s) 556, 652, 789, 907, 1489, 1500, 1512
Vha464I CTTAAG 1 cut(s) 395
VneI GTGCAC 1 cut(s) 1491
VpaK11BI GGWCC 3 cut(s) 64, 468, 1709
XapI RAATTY 2 cut(s) 669, 716
XhoI CTCGAG 1 cut(s) 557
XmiI GTMKAC 1 cut(s) 1137
XspI CTAG 3 cut(s) 1391, 1460, 1623
ZrmI AGTACT 3 cut(s) 770, 1127, 1732
Zsp2I ATGCAT 2 cut(s) 892, 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.