Rroxscaffold_4G00287690

Coronatine-insensitive protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005027
Physical Location & Seq
Forward (+)
8683536 .. 8688455
4920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00287690.1

Sequence Viewer

Length: 1779 bp
ATGGAAGATCGAAACGTGAGAATGAATACCGGAATGTCCCATGTGATGCCGTATATCAAAGACTCGAAGGACCGGGACGCCGTGTCGTTGGTGTGCCGACGGTGGTACGAGCTGGACGCGCTCACGCGCGAGCACGTGACCATCGCGCTCTGCTACACGACGACTCCCGAGAGGCTCAGGAGGCGGTTCCGGCAGCTCAAGTCGCTGAAGCTCAAGGGGAAGCCGAGGGCGGCGATGTTTAATCTGATGCCGGAGGATTGGGGAGGCTTTGTGACGCCGTGGGTGGAGGAGATTGCTGAGTCGTTTAAGAGCTTGAAGGCTTTGCATTTCCGGAGAATGATTGTGAGGGATTCCGACCTGGAGCTATTGGCGCGGTCACGCGGCCGTGAGCTCCAATCGCTTAAGCTCGACAAGTGCTCCGGGTTTTCAACTGACGGCCTTGTCCACATCGCCCGCTCCTGCAGGGATTTGAGGACCTTGTTTTTGGAGGAGAGCTTGATAATTGAGAAAGAGGATGAGTGGGGTGAATGGCTACATGAGCTTGCTACAAACAACACTGTACTCGAGACTTTAAACTTCTATATGACAGATCTTGGCAGATTCAGATTTGAAGACCTCGAACTCATAGCCAGGAATTGCCCCTCCTTAACCACTGTGAAAATTAGCGATTGTGACATTTTGGATCTTCTGGGTTTCTTCCGTCATGCAACTGCTTTAGAAGAATTTTGTGGAGGTTCCTTCGATGATCGACCAGAGAATGATCAATCAGAGAAGTACTCAGTTGTATCACTGCCACGAAAGATATGTCTTTTGGGTCTAACGATGTTGGGGAAGAATGAAATGCCTATTGTATTCCCATTAGCAGCTGCTCTCAAAAAGTTGGATCTCCTATATGCATTGCTCGACACTGAAGACCATTGTACTTTAATTCAAAAGTGCCCCAACTTGGAAGTTCTTGAGACAAGGAATGTCATTGGAGATAGAGGTTTAGAAGTCCTTGCTCGGAGTTGCAAGAGACTGCAGAGGCTCCGAATTGAGCAAGGTGCTGATGAGCAAGGTATGGAGGACGAAGATGGTGTTGTTTCACAGAGGGGTCTGATGGCTTTGGCACAGGGCTGCCTGGAACTGGAGTACGTGGCTGTCCACGTATCAGATATCACAAATGCATCTCTGGAATACATTGGGACTCACTCTAAAAATCTAAATGATTTTCGCCTTGTCCTGCTTGACCGTGAAGAGACGATAACAGATTTACCACTTGACAATGGCGTTCGAGCTCTATTGAGGGGATGCCAAAAGCTTCGAAGGTTTGCTTTGTGTCTCCGTCCTGGGGGTTTGACTGATTTGGGGCTTAGTTACGTGGGCCGGTATAGTCAAAATGTGAGATGGATGCTTCTAGGTTATGTTGGTGAATCTGATGCAGGGCTTTTGGAGTTTTTAAAGGGTTGCCTTAGTCTGCAGAAACTAGAAATGTGGGGCTGTTGCTTCAGTAAGGTTGCACTGGCTGTTGCAGTGATGCAGCTGACTGCGCTAAGGTTCTTGTGGGTGCAAGGGTACAGGGGATCCCCAACGCGTTGTGATCTTTTGGCAATGACTCGCCCGTATTGGAATATTGAGTTGATTCCTCCTAGACGAGTTAATGTTCTTGATCCGAATGGGGAGGCAGTAGTGGTTGAGCATCCAGCTCATATTCTTGGATACTACTCTCTTGCTGGACCAAGAACAGATTTTCCAGATACTGTTATCCCCTTGGATCCACAGTCTTTGATTAACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009628 GO:0009639 GO:0009641 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009814 GO:0009861 GO:0009867 GO:0009900 GO:0009901 GO:0009908 GO:0009909 GO:0009966 GO:0009987 GO:0010033 GO:0010118 GO:0010218 GO:0010498 GO:0010646 GO:0019538 GO:0019941 GO:0022414 GO:0022622 GO:0023051 GO:0023052 GO:0030163 GO:0031146 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0045087 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080134 GO:0090567 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:2000022 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like

Protein Analysis

592

Amino Acids

67.35

Weight (kDa)

5.81

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 13 - 45 9.5e-19 F-box
Transp_inhibit PF18791 65 - 110 1.6e-22 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 440
AccBSI CCGCTC 1 cut(s) 456
AccII CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
AccIII TCCGGA 1 cut(s) 330
AciI CCGC 5 cut(s) 184, 230, 373, 381, 454
AclWI GGATC 7 cut(s) 690, 891, 1557, 1570, 1643, 1748, 1761
AcoI YGGCCR 1 cut(s) 382
AcsI RAATTY 1 cut(s) 722
AcuI CTGAAG 3 cut(s) 227, 930, 1471
AcvI CACGTG 1 cut(s) 136
AcyI GRCGYC 2 cut(s) 78, 275
AfaI GTAC 6 cut(s) 107, 561, 776, 922, 1133, 1556
AfiI CCNNNNNNNGG 3 cut(s) 946, 1126, 1330
AflII CTTAAG 1 cut(s) 401
AflIII ACRYGT 1 cut(s) 1571
AgsI TTSAA 4 cut(s) 316, 429, 611, 932
AhdI GACNNNNNGTC 1 cut(s) 82
AjnI CCWGG 4 cut(s) 357, 629, 1119, 1327
AloI GAACNNNNNNTCC 2 cut(s) 1714, 1746
Alw21I GWGCWC 4 cut(s) 135, 393, 419, 1279
Alw26I GTCTC 5 cut(s) 560, 953, 1009, 1232, 1325
AlwI GGATC 7 cut(s) 690, 891, 1557, 1570, 1643, 1748, 1761
AlwNI CAGNNNCTG 1 cut(s) 1739
Ama87I CYCGRG 2 cut(s) 167, 563
Aor13HI TCCGGA 1 cut(s) 330
AoxI GGCC 3 cut(s) 382, 436, 1363
ApeKI GCWGC 5 cut(s) 193, 863, 866, 1116, 1519
ApoI RAATTY 1 cut(s) 722
ArsI GACNNNNNNTTYG 4 cut(s) 466, 498, 790, 822
AspLEI GCGC 5 cut(s) 121, 129, 148, 373, 1531
AspS9I GGNCC 4 cut(s) 70, 474, 1363, 1715
AsuC2I CCSGG 2 cut(s) 74, 421
AsuHPI GGTGA 2 cut(s) 536, 1421
AsuII TTCGAA 1 cut(s) 1303
AvaI CYCGRG 2 cut(s) 167, 563
AvaII GGWCC 3 cut(s) 70, 474, 1715
BaeGI GKGCMC 1 cut(s) 941
BamHI GGATCC 2 cut(s) 1562, 1753
BanII GRGCYC 2 cut(s) 393, 1279
BbrPI CACGTG 1 cut(s) 136
BbsI GAAGAC 2 cut(s) 618, 918
Bbv12I GWGCWC 4 cut(s) 135, 393, 419, 1279
BbvI GCAGC 5 cut(s) 205, 853, 875, 1103, 1531
BccI CCATC 4 cut(s) 149, 1067, 1093, 1380
BceAI ACGGC 5 cut(s) 34, 65, 262, 369, 451
BciT130I CCWGG 4 cut(s) 359, 631, 1121, 1329
BciVI GTATCC 1 cut(s) 1691
BclI TGATCA 1 cut(s) 760
BcnI CCSGG 2 cut(s) 74, 421
BcoDI GTCTC 5 cut(s) 560, 953, 1009, 1232, 1325
BfaI CTAG 3 cut(s) 1397, 1466, 1629
BfmI CTRYAG 3 cut(s) 460, 1019, 1457
BfrI CTTAAG 1 cut(s) 401
BfuI GTATCC 1 cut(s) 1691
BglII AGATCT 1 cut(s) 589
BisI GCNGC 7 cut(s) 194, 231, 382, 864, 867, 1117, 1520
BlsI GCNGC 7 cut(s) 195, 232, 383, 865, 868, 1118, 1521
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 6 cut(s) 74, 359, 421, 631, 1121, 1329
Bme18I GGWCC 3 cut(s) 70, 474, 1715
BmeRI GACNNNNNGTC 1 cut(s) 82
BmeT110I CYCGRG 2 cut(s) 167, 563
BmgT120I GGNCC 4 cut(s) 70, 474, 1363, 1715
BmiI GGNNCC 5 cut(s) 188, 736, 1028, 1564, 1755
BmrFI CCNGG 6 cut(s) 74, 359, 421, 631, 1121, 1329
BmsI GCATC 8 cut(s) 36, 237, 1175, 1280, 1380, 1408, 1506, 1687
BpiI GAAGAC 2 cut(s) 618, 918
BplI GAGNNNNNCTC 2 cut(s) 761, 793
BpmI CTGGAG 2 cut(s) 380, 1148
Bpu10I CCTNAGC 2 cut(s) 176, 1532
Bpu14I TTCGAA 1 cut(s) 1303
BpuEI CTTGAG 3 cut(s) 182, 197, 977
BpuMI CCSGG 2 cut(s) 74, 421
BsaAI YACGTR 4 cut(s) 136, 1135, 1147, 1360
BsaHI GRCGYC 2 cut(s) 78, 275
BsaJI CCNNGG 4 cut(s) 224, 278, 1328, 1749
BsaWI WCCGGW 2 cut(s) 29, 330
BsaXI ACNNNNNCTCC 6 cut(s) 148, 178, 255, 285, 401, 431
Bsc4I CCNNNNNNNGG 3 cut(s) 946, 1126, 1330
Bse118I RCCGGY 1 cut(s) 1365
Bse1I ACTGG 2 cut(s) 1131, 1506
Bse3DI GCAATG 2 cut(s) 896, 1596
BseAI TCCGGA 1 cut(s) 330
BseBI CCWGG 4 cut(s) 359, 631, 1121, 1329
BseDI CCNNGG 4 cut(s) 224, 278, 1328, 1749
BseGI GGATG 4 cut(s) 520, 1295, 1395, 1678
BseLI CCNNNNNNNGG 3 cut(s) 946, 1126, 1330
BseMI GCAATG 2 cut(s) 896, 1596
BseMII CTCAG 3 cut(s) 190, 288, 792
BseNI ACTGG 2 cut(s) 1131, 1506
BseRI GAGGAG 2 cut(s) 302, 503
BseSI GKGCMC 1 cut(s) 941
BseX3I CGGCCG 1 cut(s) 382
BseXI GCAGC 5 cut(s) 205, 853, 875, 1103, 1531
Bsh1236I CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
Bsh1285I CGRYCG 1 cut(s) 385
BshFI GGCC 3 cut(s) 384, 438, 1365
BsiEI CGRYCG 1 cut(s) 385
BsiHKAI GWGCWC 4 cut(s) 135, 393, 419, 1279
BsiHKCI CYCGRG 2 cut(s) 167, 563
BsiSI CCGG 7 cut(s) 30, 73, 190, 251, 331, 420, 1366
BslFI GGGAC 3 cut(s) 22, 89, 1198
BslI CCNNNNNNNGG 3 cut(s) 946, 1126, 1330
BsmAI GTCTC 5 cut(s) 560, 953, 1009, 1232, 1325
BsmBI CGTCTC 1 cut(s) 1232
BsmFI GGGAC 3 cut(s) 22, 89, 1198
BsnI GGCC 3 cut(s) 384, 438, 1365
BsoBI CYCGRG 2 cut(s) 167, 563
Bsp119I TTCGAA 1 cut(s) 1303
Bsp1286I GDGCHC 5 cut(s) 135, 393, 419, 941, 1279
Bsp13I TCCGGA 1 cut(s) 330
BspACI CCGC 5 cut(s) 184, 230, 373, 381, 454
BspANI GGCC 3 cut(s) 384, 438, 1365
BspCNI CTCAG 3 cut(s) 189, 289, 791
BspEI TCCGGA 1 cut(s) 330
BspFNI CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
BspLI GGNNCC 5 cut(s) 188, 736, 1028, 1564, 1755
BspMAI CTGCAG 3 cut(s) 464, 1023, 1461
BspPI GGATC 7 cut(s) 690, 891, 1557, 1570, 1643, 1748, 1761
BspT104I TTCGAA 1 cut(s) 1303
BspTI CTTAAG 1 cut(s) 401
BsrBI CCGCTC 1 cut(s) 456
BsrDI GCAATG 2 cut(s) 896, 1596
BsrFI RCCGGY 1 cut(s) 1365
BsrI ACTGG 2 cut(s) 1131, 1506
BssAI RCCGGY 1 cut(s) 1365
BssECI CCNNGG 4 cut(s) 224, 278, 1328, 1749
BssNI GRCGYC 2 cut(s) 78, 275
BssT1I CCWWGG 1 cut(s) 1749
Bst2UI CCWGG 4 cut(s) 359, 631, 1121, 1329
Bst4CI ACNGT 6 cut(s) 102, 559, 655, 1232, 1741, 1761
Bst6I CTCTTC 1 cut(s) 1230
BstACI GRCGYC 2 cut(s) 78, 275
BstAFI CTTAAG 1 cut(s) 401
BstBAI YACGTR 4 cut(s) 136, 1135, 1147, 1360
BstBI TTCGAA 1 cut(s) 1303
BstC8I GCNNGC 3 cut(s) 131, 454, 543
BstDEI CTNAG 6 cut(s) 176, 297, 778, 1352, 1451, 1532
BstDSI CCRYGG 1 cut(s) 278
BstF5I GGATG 4 cut(s) 520, 1295, 1395, 1678
BstFNI CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
BstHHI GCGC 5 cut(s) 121, 129, 148, 373, 1531
BstMAI GTCTC 5 cut(s) 560, 953, 1009, 1232, 1325
BstMCI CGRYCG 1 cut(s) 385
BstMWI GCNNNNNNNGC 8 cut(s) 118, 181, 190, 202, 370, 397, 538, 1528
BstNI CCWGG 4 cut(s) 359, 631, 1121, 1329
BstSCI CCNGG 6 cut(s) 72, 357, 419, 629, 1119, 1327
BstSFI CTRYAG 3 cut(s) 460, 1019, 1457
BstSLI GKGCMC 1 cut(s) 941
BstUI CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
BstV1I GCAGC 5 cut(s) 205, 853, 875, 1103, 1531
BstV2I GAAGAC 2 cut(s) 618, 918
BstX2I RGATCY 5 cut(s) 589, 682, 883, 1562, 1753
BstYI RGATCY 5 cut(s) 589, 682, 883, 1562, 1753
BstZI CGGCCG 1 cut(s) 382
BsuI GTATCC 1 cut(s) 1691
BsuRI GGCC 3 cut(s) 384, 438, 1365
BtgI CCRYGG 1 cut(s) 278
BtgZI GCGATG 3 cut(s) 127, 248, 433
BtsCI GGATG 4 cut(s) 520, 1295, 1395, 1678
BtsI GCAGTG 2 cut(s) 788, 1518
BtsIMutI CAGTG 6 cut(s) 555, 651, 788, 906, 1499, 1518
Cac8I GCNNGC 3 cut(s) 131, 454, 543
CaiI CAGNNNCTG 1 cut(s) 1739
CfoI GCGC 5 cut(s) 121, 129, 148, 373, 1531
Cfr10I RCCGGY 1 cut(s) 1365
Cfr13I GGNCC 4 cut(s) 70, 474, 1363, 1715
CseI GACGC 3 cut(s) 86, 125, 283
Csp6I GTAC 6 cut(s) 106, 560, 775, 921, 1132, 1555
CspCI CAANNNNNGTGG 1 cut(s) 1746
CviAII CATG 3 cut(s) 41, 536, 704
CviQI GTAC 6 cut(s) 106, 560, 775, 921, 1132, 1555
DdeI CTNAG 6 cut(s) 176, 297, 778, 1352, 1451, 1532
DraI TTTAAA 2 cut(s) 573, 1440
DrdI GACNNNNNNGTC 1 cut(s) 440
DriI GACNNNNNGTC 1 cut(s) 82
DseDI GACNNNNNNGTC 1 cut(s) 440
EaeI YGGCCR 1 cut(s) 382
EagI CGGCCG 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 1230
Eam1105I GACNNNNNGTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 1230
Ecl136II GAGCTC 2 cut(s) 391, 1277
EclXI CGGCCG 1 cut(s) 382
Eco130I CCWWGG 1 cut(s) 1749
Eco24I GRGCYC 2 cut(s) 393, 1279
Eco32I GATATC 1 cut(s) 1156
Eco47I GGWCC 3 cut(s) 70, 474, 1715
Eco52I CGGCCG 1 cut(s) 382
Eco53kI GAGCTC 2 cut(s) 391, 1277
Eco57I CTGAAG 3 cut(s) 227, 930, 1471
Eco72I CACGTG 1 cut(s) 136
Eco88I CYCGRG 2 cut(s) 167, 563
EcoICRI GAGCTC 2 cut(s) 391, 1277
EcoO109I RGGNCCY 1 cut(s) 474
EcoRII CCWGG 4 cut(s) 357, 629, 1119, 1327
EcoRV GATATC 1 cut(s) 1156
EcoT14I CCWWGG 1 cut(s) 1749
EcoT22I ATGCAT 2 cut(s) 898, 1168
EcoT38I GRGCYC 2 cut(s) 393, 1279
ErhI CCWWGG 1 cut(s) 1749
Esp3I CGTCTC 1 cut(s) 1232
FaeI CATG 3 cut(s) 44, 539, 707
FalI AAGNNNNNCTT 2 cut(s) 1297, 1329
FaqI GGGAC 3 cut(s) 22, 89, 1198
FatI CATG 3 cut(s) 40, 535, 703
FauI CCCGC 1 cut(s) 461
FbaI TGATCA 1 cut(s) 760
Fnu4HI GCNGC 7 cut(s) 194, 231, 382, 864, 867, 1117, 1520
FokI GGATG 4 cut(s) 527, 1302, 1402, 1665
FriOI GRGCYC 2 cut(s) 393, 1279
Fsp4HI GCNGC 7 cut(s) 194, 231, 382, 864, 867, 1117, 1520
FspBI CTAG 3 cut(s) 1397, 1466, 1629
GlaI GCGC 5 cut(s) 120, 128, 147, 372, 1530
GluI GCNGC 7 cut(s) 194, 231, 382, 864, 867, 1117, 1520
GsuI CTGGAG 2 cut(s) 380, 1148
HaeIII GGCC 3 cut(s) 384, 438, 1365
HapII CCGG 7 cut(s) 30, 73, 190, 251, 331, 420, 1366
HgaI GACGC 3 cut(s) 86, 125, 283
HhaI GCGC 5 cut(s) 121, 129, 148, 373, 1531
Hin1I GRCGYC 2 cut(s) 78, 275
Hin1II CATG 3 cut(s) 44, 539, 707
Hin6I GCGC 5 cut(s) 119, 127, 146, 371, 1529
HinP1I GCGC 5 cut(s) 119, 127, 146, 371, 1529
HindIII AAGCTT 1 cut(s) 1298
HinfI GANTC 9 cut(s) 62, 163, 299, 350, 600, 1186, 1412, 1594, 1621
HpaII CCGG 7 cut(s) 30, 73, 190, 251, 331, 420, 1366
HphI GGTGA 2 cut(s) 536, 1421
Hpy166II GTNNAC 2 cut(s) 445, 1144
Hpy188III TCNNGA 8 cut(s) 167, 178, 331, 565, 956, 1172, 1646, 1733
Hpy8I GTNNAC 2 cut(s) 445, 1144
Hpy99I CGWCG 2 cut(s) 102, 163
HpyAV CCTTC 4 cut(s) 61, 310, 748, 1299
HpyCH4III ACNGT 6 cut(s) 102, 559, 655, 1232, 1741, 1761
HpyCH4IV ACGT 5 cut(s) 15, 135, 1134, 1146, 1359
HpyF10VI GCNNNNNNNGC 8 cut(s) 118, 181, 190, 202, 370, 397, 538, 1528
HpyF3I CTNAG 6 cut(s) 176, 297, 778, 1352, 1451, 1532
HpySE526I ACGT 5 cut(s) 15, 135, 1134, 1146, 1359
Hsp92I GRCGYC 2 cut(s) 78, 275
Hsp92II CATG 3 cut(s) 44, 539, 707
HspAI GCGC 5 cut(s) 119, 127, 146, 371, 1529
Kpn2I TCCGGA 1 cut(s) 330
Ksp22I TGATCA 1 cut(s) 760
LmnI GCTCC 5 cut(s) 361, 396, 422, 461, 1032
Lsp1109I GCAGC 5 cut(s) 205, 853, 875, 1103, 1531
LweI GCATC 8 cut(s) 36, 237, 1175, 1280, 1380, 1408, 1506, 1687
MaeI CTAG 3 cut(s) 1397, 1466, 1629
MaeII ACGT 5 cut(s) 15, 135, 1134, 1146, 1359
MaeIII GTNAC 5 cut(s) 136, 271, 375, 671, 1355
MbiI CCGCTC 1 cut(s) 456
MboII GAAGA 9 cut(s) 17, 623, 677, 688, 731, 844, 923, 1082, 1247
MflI RGATCY 5 cut(s) 589, 682, 883, 1562, 1753
MhlI GDGCHC 5 cut(s) 135, 393, 419, 941, 1279
MluCI AATT 6 cut(s) 501, 634, 660, 722, 927, 1032
MluI ACGCGT 1 cut(s) 1571
MlyI GAGTC 5 cut(s) 56, 157, 308, 1180, 1588
MmeI TCCRAC 2 cut(s) 378, 861
Mph1103I ATGCAT 2 cut(s) 898, 1168
MroI TCCGGA 1 cut(s) 330
MseI TTAA 9 cut(s) 240, 306, 402, 572, 647, 926, 1439, 1638, 1770
MspA1I CMGCKG 2 cut(s) 866, 1522
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 7 cut(s) 30, 73, 190, 251, 331, 420, 1366
MspR9I CCNGG 6 cut(s) 74, 359, 421, 631, 1121, 1329
MvaI CCWGG 4 cut(s) 359, 631, 1121, 1329
MvnI CGCG 7 cut(s) 119, 127, 129, 146, 373, 381, 1573
MwoI GCNNNNNNNGC 8 cut(s) 118, 181, 190, 202, 370, 397, 538, 1528
NciI CCSGG 2 cut(s) 74, 421
NlaIII CATG 3 cut(s) 44, 539, 707
NlaIV GGNNCC 5 cut(s) 188, 736, 1028, 1564, 1755
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 4 cut(s) 136, 271, 375, 671
NsiI ATGCAT 2 cut(s) 898, 1168
NspV TTCGAA 1 cut(s) 1303
PaeR7I CTCGAG 1 cut(s) 563
PfeI GAWTC 4 cut(s) 350, 600, 1412, 1621
PkrI GCNGC 7 cut(s) 195, 232, 383, 865, 868, 1118, 1521
PleI GAGTC 5 cut(s) 56, 157, 307, 1180, 1588
PmaCI CACGTG 1 cut(s) 136
PmlI CACGTG 1 cut(s) 136
PpsI GAGTC 5 cut(s) 56, 157, 307, 1180, 1588
Ppu21I YACGTR 4 cut(s) 136, 1135, 1147, 1360
PpuMI RGGWCCY 1 cut(s) 474
Psp124BI GAGCTC 2 cut(s) 393, 1279
Psp5II RGGWCCY 1 cut(s) 474
Psp6I CCWGG 4 cut(s) 357, 629, 1119, 1327
PspCI CACGTG 1 cut(s) 136
PspGI CCWGG 4 cut(s) 357, 629, 1119, 1327
PspN4I GGNNCC 5 cut(s) 188, 736, 1028, 1564, 1755
PspPI GGNCC 4 cut(s) 70, 474, 1363, 1715
PspPPI RGGWCCY 1 cut(s) 474
PstI CTGCAG 3 cut(s) 464, 1023, 1461
PstNI CAGNNNCTG 1 cut(s) 1739
PsuI RGATCY 5 cut(s) 589, 682, 883, 1562, 1753
PvuII CAGCTG 2 cut(s) 866, 1522
RsaI GTAC 6 cut(s) 107, 561, 776, 922, 1133, 1556
RsaNI GTAC 6 cut(s) 106, 560, 775, 921, 1132, 1555
SacI GAGCTC 2 cut(s) 393, 1279
SaqAI TTAA 9 cut(s) 240, 306, 402, 572, 647, 926, 1439, 1638, 1770
SatI GCNGC 7 cut(s) 194, 231, 382, 864, 867, 1117, 1520
Sau96I GGNCC 4 cut(s) 70, 474, 1363, 1715
SbfI CCTGCAGG 1 cut(s) 464
ScaI AGTACT 1 cut(s) 776
SchI GAGTC 5 cut(s) 56, 157, 308, 1180, 1588
ScrFI CCNGG 6 cut(s) 74, 359, 421, 631, 1121, 1329
SdaI CCTGCAGG 1 cut(s) 464
SduI GDGCHC 5 cut(s) 135, 393, 419, 941, 1279
SfaNI GCATC 8 cut(s) 36, 237, 1175, 1280, 1380, 1408, 1506, 1687
SfcI CTRYAG 3 cut(s) 460, 1019, 1457
Sfr274I CTCGAG 1 cut(s) 563
SfuI TTCGAA 1 cut(s) 1303
SinI GGWCC 3 cut(s) 70, 474, 1715
SlaI CTCGAG 1 cut(s) 563
SmlI CTYRAG 5 cut(s) 197, 212, 401, 563, 956
SmoI CTYRAG 5 cut(s) 197, 212, 401, 563, 956
Sse8387I CCTGCAGG 1 cut(s) 464
Sse9I AATT 6 cut(s) 501, 634, 660, 722, 927, 1032
SsiI CCGC 5 cut(s) 184, 230, 373, 381, 454
SspI AATATT 1 cut(s) 1612
SspMI CTAG 3 cut(s) 1397, 1466, 1629
SstI GAGCTC 2 cut(s) 393, 1279
StyD4I CCNGG 6 cut(s) 72, 357, 419, 629, 1119, 1327
StyI CCWWGG 1 cut(s) 1749
TaaI ACNGT 6 cut(s) 102, 559, 655, 1232, 1741, 1761
TaiI ACGT 5 cut(s) 18, 138, 1137, 1149, 1362
TasI AATT 6 cut(s) 501, 634, 660, 722, 927, 1032
TatI WGTACW 3 cut(s) 559, 774, 920
TauI GCSGC 2 cut(s) 233, 384
TfiI GAWTC 4 cut(s) 350, 600, 1412, 1621
Tru1I TTAA 9 cut(s) 240, 306, 402, 572, 647, 926, 1439, 1638, 1770
Tru9I TTAA 9 cut(s) 240, 306, 402, 572, 647, 926, 1439, 1638, 1770
TscAI CASTG 6 cut(s) 562, 658, 795, 913, 1506, 1518
TseFI GTSAC 4 cut(s) 136, 271, 375, 671
TseI GCWGC 5 cut(s) 193, 863, 866, 1116, 1519
Tsp45I GTSAC 4 cut(s) 136, 271, 375, 671
TspDTI ATGAA 2 cut(s) 38, 852
TspGWI ACGGA 2 cut(s) 689, 1313
TspRI CASTG 6 cut(s) 562, 658, 795, 913, 1506, 1518
Vha464I CTTAAG 1 cut(s) 401
VpaK11BI GGWCC 3 cut(s) 70, 474, 1715
XapI RAATTY 1 cut(s) 722
XhoI CTCGAG 1 cut(s) 563
XspI CTAG 3 cut(s) 1397, 1466, 1629
ZrmI AGTACT 1 cut(s) 776
Zsp2I ATGCAT 2 cut(s) 898, 1168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.