RLG00000032168

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0013500
Physical Location & Seq
Forward (+)
11758999 .. 11761311
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032168

Sequence Viewer

Length: 1842 bp
ATGCTCCCAAAGCAGCCCTCACTCACCCACACAATCTCAACAACCTTAACTCATCACAACCCAGTTTCAAGCTTCTCTTCCCCAACCCGGCCACAAAATCCACTCCCCTTCATCCTCCAAAAATGCATTGCTCTCCTGCAAAGCTGTGCCTCCTCCATTTCCAAACTCAAACAAATCCACGCCTTCTCTTTACGACATGGCGTCCCTCTCTCCAACCCAGATATGGGCAAACACCTCATCTTCACCGCAGTGTCACTCTCATCCCCAATGTCCTATGCCCACCAAGTATTCTCCCAAATCCAATGGCCCAATGTGTTCACATGGAACACCATGATTAGAGGCTACGCCGAGAGCCAAAACCCAATGCCTGTAATGCAACTCCACCACCAAATGCGTGACAATTCTGTCGAACCCGATACGCATACATACCCTTTTCTTTTGAAGGCTGTGGCTAAGTTGTTGAATGTGAGAGACGGGGAGAAGATACATTCCATTGCTCTGAGAAATGGGCTCGAGTCGTTGGTCTTCGTTAAGAACGCTTTGCTTCACATGTACGCCGTTTGTGGGCAGGTGGAGAGTGCGTACGAGGTGTTTGAGTCAATGTCTGAGAGAGACCTTGTGGCTTGGAACTCTGTGATTAATGGGTTTTCCTTGAATGGAAGGCCTAATGAGGCTCTGACTATATTTGGGGAGATGAGTTTGGAGGGTGTTGAGCCGGATGGGTTCACCATGGTTAGCTTGTTGTGTGCTTGTGCCGAGCTTGGAGCTTTGGCTTTGGGTGGGAGGGTTCATGTGTATATGTTGAAGGTGGGTTTGACAAGGAATGCTCATGCTAGTAATGCGCTTCTGGATGTTTATGCAAAGTGTGGGAGCATTAGGGAGGCGCAGAAGGTGTTTGAAGAGATGGAGGAGAGGAGTGTGGTTTCATGGACTGCTTTGGTTGTTGGGTTGGCTGTTAATGGGTTTGGTAAGGAGGCATTGGAGCTTTTTAAAGAGTTTAAAAGAGAGGGATTGGTGCCGACTGAGATAACTTTTGTTGGGGTTCTGTATGCCTGTAGTCATTGCGGGATGGTTGATGAAGGGTTTGAGTACTTTAGAGTGATGAAAGAGGAGTATCGGATTGTGCCCAGAATAGAACATTATGGTTGCATGGTTGATTTGTTAGCTAGAGCAGGCTTAGTGAAAGAAGCGTATGGATACATTAAGGACATGCCTGTTCACCCCAATGCTGTTATTTGGAGGACCTTATTAGGAGCATGCACCATACATGGGCAATCGGCTCTAGGGGAGATTGCAAGAGGCCACATCCTGCAGTTAGAACCTAGACATAGTGGGGATTATGTGCTGATCTCCAATCTCTACGCATCTGAGCGTCGATGGTCGGATGTGCAAAAGGTGAGGAGAACAATGCTCAGTGAAGGTGTGAAGAAAACTCCGGGCTATAGTATTGTTGAGTTGAGGAACAGAGTTTTCGAGTTTACTATGGGTGATAGATCTCATCCACAAAGTGATGAGATATATGCAAAGCTGGTAGAGATTACAAAATTACTGAAACAAAAAGGTTATGTGCCTCATACAGAGAATGTTCTTGCAGACATAGAGGAGGAAGAAAAAGAAAATGCTTTGTCCTATCACAGTGAAAAAATTGCAATTGCATTCATGCTCCTAGTTACAGCACCTGGGATACCAATTAGGATTTGGAAGAATTTGAGAGTTTGTGCAGATTGTCATCTTGCATTTAAGCTCATCTCAAAGGTTTATGATCGGGAGATTGTTGTGAGGGATCGTAGCCGATTTCACCATTTTAGAGATGGTTCTTGTTCTTGTAGTGATTACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 X8

Protein Analysis

614

Amino Acids

69.05

Weight (kDa)

7.13

Isoelectric Point (pI)

46.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 103 - 152 1.2e-11 PPR repeat family
PPR_2 PF13041 205 - 252 2.4e-10 PPR repeat family
PPR PF01535 207 - 237 8.7e-07 PPR repeat
PPR_2 PF13041 306 - 353 3.2e-06 PPR repeat family
E_motif PF20431 426 - 485 3.2e-17 E motif
Eplus_motif PF20430 491 - 515 1.3e-08 E+ motif
DYW_deaminase PF14432 521 - 613 6.8e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013500)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21065 AT4G21065
fragaria_vesca FvH4_3g09500
malus_domestica MD05G1277300.v1.1 MD10G1256200.v1.1
prunus_persica Prupe.4G087400_v2.0.a1
pyrus_communis pycom05g25840 pycom10g21200
rosa_chinensis RchiOBHm_Chr5g0015081
rosa_laevigata RLG00000032168
rosa_multiflora Rmu_co8160296.1_g000001 Rmu_sc0002209.1_g000002 Rmu_sc0009777.1_g000014 Rmu_sc0036572.1_g000001
rosa_roxburghii Rroxscaffold_1G00061450
rosa_rugosa Rorug05G0024200
rosa_samantha Rh5CG127500
rosa_wichuraiana Rw5G010250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 559
AasI GACNNNNNNGTC 1 cut(s) 404
Acc36I ACCTGC 1 cut(s) 559
AccB1I GGYRCC 1 cut(s) 1015
AciI CCGC 2 cut(s) 246, 1065
AclWI GGATC 1 cut(s) 1791
AcoI YGGCCR 1 cut(s) 89
AcsI RAATTY 1 cut(s) 1705
AcyI GRCGYC 1 cut(s) 201
AdeI CACNNNGTG 1 cut(s) 1508
AfaI GTAC 3 cut(s) 554, 584, 1091
AfiI CCNNNNNNNGG 5 cut(s) 87, 223, 224, 564, 1269
AflIII ACRYGT 1 cut(s) 549
AgsI TTSAA 6 cut(s) 69, 442, 463, 655, 805, 899
AhdI GACNNNNNGTC 1 cut(s) 200
AjnI CCWGG 1 cut(s) 1678
AleI CACNNNNGTG 1 cut(s) 248
AluBI AGCT 9 cut(s) 72, 144, 738, 760, 767, 985, 1166, 1528, 1744
AluI AGCT 9 cut(s) 72, 144, 738, 760, 767, 985, 1166, 1528, 1744
Alw26I GTCTC 2 cut(s) 465, 606
AlwI GGATC 1 cut(s) 1791
AlwNI CAGNNNCTG 1 cut(s) 1679
Ama87I CYCGRG 1 cut(s) 512
AoxI GGCC 4 cut(s) 89, 305, 662, 1300
ApeKI GCWGC 1 cut(s) 13
ApoI RAATTY 1 cut(s) 1705
AseI ATTAAT 1 cut(s) 639
AspLEI GCGC 2 cut(s) 844, 886
AspS9I GGNCC 2 cut(s) 306, 1242
AsuC2I CCSGG 2 cut(s) 88, 1437
AsuHPI GGTGA 7 cut(s) 16, 235, 718, 1211, 1408, 1499, 1790
AvaI CYCGRG 1 cut(s) 512
AvaII GGWCC 1 cut(s) 1242
BaeGI GKGCMC 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 1015
BanII GRGCYC 1 cut(s) 513
BbsI GAAGAC 1 cut(s) 517
BbvI GCAGC 1 cut(s) 25
BccI CCATC 5 cut(s) 713, 898, 1063, 1371, 1805
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 1680
BciVI GTATCC 2 cut(s) 1190, 1677
BcnI CCSGG 2 cut(s) 88, 1437
BcoDI GTCTC 2 cut(s) 465, 606
BfaI CTAG 5 cut(s) 834, 1167, 1283, 1323, 1667
BfmI CTRYAG 3 cut(s) 1054, 1310, 1441
BfuAI ACCTGC 1 cut(s) 559
BfuI GTATCC 2 cut(s) 1190, 1677
BglII AGATCT 1 cut(s) 1493
BisI GCNGC 1 cut(s) 14
BlsI GCNGC 1 cut(s) 15
BmcAI AGTACT 1 cut(s) 1091
Bme1390I CCNGG 3 cut(s) 88, 1437, 1680
Bme18I GGWCC 1 cut(s) 1242
BmeRI GACNNNNNGTC 1 cut(s) 200
BmeT110I CYCGRG 1 cut(s) 512
BmgT120I GGNCC 2 cut(s) 306, 1242
BmiI GGNNCC 1 cut(s) 1017
BmrFI CCNGG 3 cut(s) 88, 1437, 1680
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 1 cut(s) 1373
BmuI ACTGGG 1 cut(s) 56
BpiI GAAGAC 1 cut(s) 517
BpuMI CCSGG 2 cut(s) 88, 1437
BsaBI GATNNNNATC 1 cut(s) 1728
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 606
BsaJI CCNNGG 2 cut(s) 729, 1679
BsaXI ACNNNNNCTCC 2 cut(s) 566, 596
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 223, 224, 564, 1269
Bse1I ACTGG 2 cut(s) 62, 1841
Bse3DI GCAATG 3 cut(s) 126, 492, 1060
Bse8I GATNNNNATC 1 cut(s) 1728
BseBI CCWGG 1 cut(s) 1680
BseDI CCNNGG 2 cut(s) 729, 1679
BseGI GGATG 8 cut(s) 111, 260, 724, 856, 1074, 1305, 1390, 1498
BseJI GATNNNNATC 1 cut(s) 1728
BseLI CCNNNNNNNGG 5 cut(s) 87, 223, 224, 564, 1269
BseMI GCAATG 3 cut(s) 126, 492, 1060
BseMII CTCAG 5 cut(s) 491, 597, 1014, 1359, 1426
BseNI ACTGG 2 cut(s) 62, 1841
BseRI GAGGAG 6 cut(s) 142, 923, 928, 1124, 1414, 1616
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 1 cut(s) 25
BsgI GTGCAG 1 cut(s) 1740
BshFI GGCC 4 cut(s) 91, 307, 664, 1302
BshNI GGYRCC 1 cut(s) 1015
BsiHKCI CYCGRG 1 cut(s) 512
BsiSI CCGG 3 cut(s) 88, 716, 1436
BsiWI CGTACG 1 cut(s) 582
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 5 cut(s) 87, 223, 224, 564, 1269
BsmAI GTCTC 2 cut(s) 465, 606
BsmBI CGTCTC 1 cut(s) 465
BsmFI GGGAC 1 cut(s) 188
BsmI GAATGC 2 cut(s) 829, 1655
BsnI GGCC 4 cut(s) 91, 307, 664, 1302
Bso31I GGTCTC 1 cut(s) 606
BsoBI CYCGRG 1 cut(s) 512
Bsp1286I GDGCHC 2 cut(s) 513, 1128
Bsp143I GATC 4 cut(s) 1347, 1493, 1762, 1783
Bsp19I CCATGG 1 cut(s) 729
BspACI CCGC 2 cut(s) 246, 1065
BspANI GGCC 4 cut(s) 91, 307, 664, 1302
BspCNI CTCAG 5 cut(s) 492, 598, 1015, 1360, 1425
BspLI GGNNCC 1 cut(s) 1017
BspMAI CTGCAG 1 cut(s) 1314
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 1 cut(s) 1791
BspT107I GGYRCC 1 cut(s) 1015
BspTNI GGTCTC 1 cut(s) 606
BsrDI GCAATG 3 cut(s) 126, 492, 1060
BsrI ACTGG 2 cut(s) 62, 1841
BssECI CCNNGG 2 cut(s) 729, 1679
BssMI GATC 4 cut(s) 1347, 1493, 1762, 1783
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 729
Bst2UI CCWGG 1 cut(s) 1680
Bst4CI ACNGT 1 cut(s) 1637
Bst6I CTCTTC 2 cut(s) 82, 894
BstACI GRCGYC 1 cut(s) 201
BstC8I GCNNGC 2 cut(s) 1174, 1258
BstDEI CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
BstDSI CCRYGG 1 cut(s) 729
BstF5I GGATG 8 cut(s) 111, 260, 724, 856, 1074, 1305, 1390, 1498
BstHHI GCGC 2 cut(s) 844, 886
BstKTI GATC 4 cut(s) 1350, 1496, 1765, 1786
BstMAI GTCTC 2 cut(s) 465, 606
BstMBI GATC 4 cut(s) 1347, 1493, 1762, 1783
BstMWI GCNNNNNNNGC 3 cut(s) 10, 373, 839
BstNI CCWGG 1 cut(s) 1680
BstNSI RCATGY 3 cut(s) 553, 1213, 1260
BstSCI CCNGG 3 cut(s) 86, 1435, 1678
BstSFI CTRYAG 3 cut(s) 1054, 1310, 1441
BstSLI GKGCMC 1 cut(s) 1128
BstV1I GCAGC 1 cut(s) 25
BstV2I GAAGAC 1 cut(s) 517
BstX2I RGATCY 1 cut(s) 1493
BstYI RGATCY 1 cut(s) 1493
BsuI GTATCC 2 cut(s) 1190, 1677
BsuRI GGCC 4 cut(s) 91, 307, 664, 1302
BtgI CCRYGG 1 cut(s) 729
BtsCI GGATG 8 cut(s) 111, 260, 724, 856, 1074, 1305, 1390, 1498
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 3 cut(s) 255, 1420, 1642
BveI ACCTGC 1 cut(s) 559
Cac8I GCNNGC 2 cut(s) 1174, 1258
CaiI CAGNNNCTG 1 cut(s) 1679
CfoI GCGC 2 cut(s) 844, 886
Cfr13I GGNCC 2 cut(s) 306, 1242
CseI GACGC 2 cut(s) 190, 1361
Csp6I GTAC 3 cut(s) 553, 583, 1090
CviQI GTAC 3 cut(s) 553, 583, 1090
DdeI CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
DpnI GATC 4 cut(s) 1349, 1495, 1764, 1785
DpnII GATC 4 cut(s) 1347, 1493, 1762, 1783
DraI TTTAAA 2 cut(s) 991, 1000
DraIII CACNNNGTG 1 cut(s) 1508
DrdI GACNNNNNNGTC 1 cut(s) 404
DriI GACNNNNNGTC 1 cut(s) 200
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 1 cut(s) 89
Eam1104I CTCTTC 2 cut(s) 82, 894
Eam1105I GACNNNNNGTC 1 cut(s) 200
EarI CTCTTC 2 cut(s) 82, 894
Eco130I CCWWGG 1 cut(s) 729
Eco147I AGGCCT 1 cut(s) 664
Eco24I GRGCYC 1 cut(s) 513
Eco31I GGTCTC 1 cut(s) 606
Eco47I GGWCC 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 512
EcoO109I RGGNCCY 1 cut(s) 1242
EcoRII CCWGG 1 cut(s) 1678
EcoT14I CCWWGG 1 cut(s) 729
EcoT22I ATGCAT 1 cut(s) 128
EcoT38I GRGCYC 1 cut(s) 513
ErhI CCWWGG 1 cut(s) 729
Esp3I CGTCTC 1 cut(s) 465
FalI AAGNNNNNCTT 2 cut(s) 61, 93
FaqI GGGAC 1 cut(s) 188
FauI CCCGC 1 cut(s) 1058
Fnu4HI GCNGC 1 cut(s) 14
FokI GGATG 8 cut(s) 98, 247, 731, 863, 1081, 1292, 1397, 1485
FriOI GRGCYC 1 cut(s) 513
Fsp4HI GCNGC 1 cut(s) 14
FspBI CTAG 5 cut(s) 834, 1167, 1283, 1323, 1667
GlaI GCGC 2 cut(s) 843, 885
GluI GCNGC 1 cut(s) 14
HaeIII GGCC 4 cut(s) 91, 307, 664, 1302
HapII CCGG 3 cut(s) 88, 716, 1436
HgaI GACGC 2 cut(s) 190, 1361
HhaI GCGC 2 cut(s) 844, 886
Hin1I GRCGYC 1 cut(s) 201
Hin6I GCGC 2 cut(s) 842, 884
HinP1I GCGC 2 cut(s) 842, 884
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 2 cut(s) 515, 596
HpaII CCGG 3 cut(s) 88, 716, 1436
HphI GGTGA 7 cut(s) 16, 235, 718, 1211, 1408, 1499, 1790
Hpy166II GTNNAC 4 cut(s) 318, 726, 1219, 1479
Hpy188I TCNGA 6 cut(s) 501, 607, 678, 1119, 1369, 1384
Hpy188III TCNNGA 2 cut(s) 848, 1766
Hpy8I GTNNAC 4 cut(s) 318, 726, 1219, 1479
Hpy99I CGWCG 1 cut(s) 1377
HpyAV CCTTC 8 cut(s) 118, 193, 436, 654, 799, 883, 1073, 1412
HpyCH4III ACNGT 1 cut(s) 1637
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 373, 839
HpyF3I CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
Hsp92I GRCGYC 1 cut(s) 201
HspAI GCGC 2 cut(s) 842, 884
Kzo9I GATC 4 cut(s) 1347, 1493, 1762, 1783
LmnI GCTCC 6 cut(s) 9, 764, 870, 982, 1253, 1668
Lsp1109I GCAGC 1 cut(s) 25
LweI GCATC 1 cut(s) 1373
MaeI CTAG 5 cut(s) 834, 1167, 1283, 1323, 1667
MaeIII GTNAC 3 cut(s) 252, 395, 1669
MalI GATC 4 cut(s) 1349, 1495, 1764, 1785
MboI GATC 4 cut(s) 1347, 1493, 1762, 1783
MboII GAAGA 8 cut(s) 69, 232, 493, 517, 911, 1438, 1619, 1714
MfeI CAATTG 1 cut(s) 1650
MflI RGATCY 1 cut(s) 1493
MhlI GDGCHC 2 cut(s) 513, 1128
MluCI AATT 6 cut(s) 400, 1544, 1644, 1650, 1689, 1705
MlyI GAGTC 2 cut(s) 524, 605
MmeI TCCRAC 2 cut(s) 237, 1362
Mph1103I ATGCAT 1 cut(s) 128
MseI TTAA 8 cut(s) 47, 531, 639, 957, 990, 999, 1203, 1740
MslI CAYNNNNRTG 2 cut(s) 248, 1224
MspI CCGG 3 cut(s) 88, 716, 1436
MspR9I CCNGG 3 cut(s) 88, 1437, 1680
MunI CAATTG 1 cut(s) 1650
Mva1269I GAATGC 2 cut(s) 829, 1655
MvaI CCWGG 1 cut(s) 1680
MwoI GCNNNNNNNGC 3 cut(s) 10, 373, 839
NciI CCSGG 2 cut(s) 88, 1437
NcoI CCATGG 1 cut(s) 729
NdeII GATC 4 cut(s) 1347, 1493, 1762, 1783
NlaIV GGNNCC 1 cut(s) 1017
NmeAIII GCCGAG 2 cut(s) 373, 781
NmuCI GTSAC 2 cut(s) 252, 395
NsiI ATGCAT 1 cut(s) 128
NspI RCATGY 3 cut(s) 553, 1213, 1260
OliI CACNNNNGTG 1 cut(s) 248
PaeI GCATGC 1 cut(s) 1260
PaeR7I CTCGAG 1 cut(s) 512
PaqCI CACCTGC 1 cut(s) 559
PceI AGGCCT 1 cut(s) 664
PciI ACATGT 1 cut(s) 549
PctI GAATGC 2 cut(s) 829, 1655
Pfl23II CGTACG 1 cut(s) 582
PkrI GCNGC 1 cut(s) 15
PleI GAGTC 2 cut(s) 523, 604
PpsI GAGTC 2 cut(s) 523, 604
PpuMI RGGWCCY 1 cut(s) 1242
PscI ACATGT 1 cut(s) 549
PshBI ATTAAT 1 cut(s) 639
Psp5II RGGWCCY 1 cut(s) 1242
Psp6I CCWGG 1 cut(s) 1678
PspGI CCWGG 1 cut(s) 1678
PspLI CGTACG 1 cut(s) 582
PspN4I GGNNCC 1 cut(s) 1017
PspPI GGNCC 2 cut(s) 306, 1242
PspPPI RGGWCCY 1 cut(s) 1242
PspXI VCTCGAGB 1 cut(s) 512
PstI CTGCAG 1 cut(s) 1314
PstNI CAGNNNCTG 1 cut(s) 1679
PsuI RGATCY 1 cut(s) 1493
RsaI GTAC 3 cut(s) 554, 584, 1091
RsaNI GTAC 3 cut(s) 553, 583, 1090
RseI CAYNNNNRTG 2 cut(s) 248, 1224
SaqAI TTAA 8 cut(s) 47, 531, 639, 957, 990, 999, 1203, 1740
SatI GCNGC 1 cut(s) 14
Sau3AI GATC 4 cut(s) 1347, 1493, 1762, 1783
Sau96I GGNCC 2 cut(s) 306, 1242
ScaI AGTACT 1 cut(s) 1091
SchI GAGTC 2 cut(s) 524, 605
ScrFI CCNGG 3 cut(s) 88, 1437, 1680
SduI GDGCHC 2 cut(s) 513, 1128
SfaNI GCATC 1 cut(s) 1373
SfcI CTRYAG 3 cut(s) 1054, 1310, 1441
Sfr274I CTCGAG 1 cut(s) 512
SinI GGWCC 1 cut(s) 1242
SlaI CTCGAG 1 cut(s) 512
SmiMI CAYNNNNRTG 2 cut(s) 248, 1224
SmlI CTYRAG 1 cut(s) 512
SmoI CTYRAG 1 cut(s) 512
SphI GCATGC 1 cut(s) 1260
Sse9I AATT 6 cut(s) 400, 1544, 1644, 1650, 1689, 1705
SseBI AGGCCT 1 cut(s) 664
SsiI CCGC 2 cut(s) 246, 1065
SspMI CTAG 5 cut(s) 834, 1167, 1283, 1323, 1667
StuI AGGCCT 1 cut(s) 664
StyD4I CCNGG 3 cut(s) 86, 1435, 1678
StyI CCWWGG 1 cut(s) 729
TaaI ACNGT 1 cut(s) 1637
TaqI TCGA 4 cut(s) 408, 513, 1375, 1473
TasI AATT 6 cut(s) 400, 1544, 1644, 1650, 1689, 1705
TatI WGTACW 1 cut(s) 1089
Tru1I TTAA 8 cut(s) 47, 531, 639, 957, 990, 999, 1203, 1740
Tru9I TTAA 8 cut(s) 47, 531, 639, 957, 990, 999, 1203, 1740
TscAI CASTG 3 cut(s) 255, 1420, 1642
TseFI GTSAC 2 cut(s) 252, 395
TseI GCWGC 1 cut(s) 13
Tsp45I GTSAC 2 cut(s) 252, 395
TspDTI ATGAA 6 cut(s) 100, 779, 915, 1092, 1118, 1648
TspRI CASTG 3 cut(s) 255, 1420, 1642
VpaK11BI GGWCC 1 cut(s) 1242
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 1 cut(s) 1705
XceI RCATGY 3 cut(s) 553, 1213, 1260
XcmI CCANNNNNNNNNTGG 3 cut(s) 220, 1695, 1808
XhoI CTCGAG 1 cut(s) 512
XspI CTAG 5 cut(s) 834, 1167, 1283, 1323, 1667
ZrmI AGTACT 1 cut(s) 1091
Zsp2I ATGCAT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.