Rroxscaffold_1G00061450

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0013500
Physical Location & Seq
Reverse (-)
83577153 .. 83579413
2261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00061450.1

Sequence Viewer

Length: 1842 bp
ATGCTCCCAAAGCAGCCCTCACTCACCCACACAATCTCAACAACCCTAACTCATCACAACCCAGTTTCAAGCTTCTCTTCCCCAACCCGCCCACAAAATCCACTCCCCTTCATCCTCCAAAAATGCATTGTTCTCCTGCAAAGCTGTGCCTCTTCCAATTCCAAACTCAAACAAATCCACGCCTTCTCTTTACGACATGGCGTCCCTTTCTCCAACCCAGATATGGGCAAACACCTCATCTTCACCGCAGTGTCACTCTCATCCCCAATGTCCTATGCGCACCAAGTATTCTCCCAAATCCAATGGCCCAATGTGTTCACGTGGAACACCATGATTAGAGGCTACGCCGAGAGCCAAAACCCAATGCCTGTAATTCAACTCTACCACCAAATGCGTGACAATTCTGTCGAACCAGACACGCATACATACCCTTTTCTCTTGAAGGCTGTGGCTAAGTTGTTGAATGTGAGAGAGGGGGAGAAGATACATTCCATTGCTCTGAGAAATGGGCTGGAGTCGTTGGTCTTTGTTAAGAACGCTTTGCTTCACATGTACGCCGTTTGTGGGCAGGTGGAGAGTGCATACGAGGTGTTTGAGTCAATGTCTGAGAGAGACCTGGTGGCTTGGAACTCTGTGATTAATGGGTTTTCTTTGAATGGAAGGCCCAATGAGGCTCTGACTATATTTAGGGAGATGAGTTTGGAGGGTGTTGAGCCGGATGGGTTCACCATGGTTAGCTTGTTGTGTGCTTGTGCCGAGCTTGGAGCTTTGGCTTTGGGTGGGAGGGTTCATGTGTATATGTTGAAGGCGGGTTTGACAAGGAATGCGCACGCTAGTAATGCGCTTCTGGATGTTTATGCAAAGTGTGGAAGCATAAGGGAGGCGCAGAAGGTGTTTGAAGAAATGGAGGAGAGGAGTGTGGTTTCGTGGACTGCTTTGGTTGTTGGGTTGGCTGTTAATGGGTTTGGTAAGGAGGCATTGGAGCTTTTTAAAGAGTTTAAAACAGAGGGATTGGTGCCGACTGAGATAACTTTTGTTGGGGTTCTGTATGCCTGTAGCCATTGCGGGATGGTTGATGAAGGGTTTGAGTACTTTAGAGTGATGAAAGAGAAGTATCGGATTGTGCCCAGAATAGAACATTATGGTTGCATGGTTGATTTGTTAGCTAGAGCAGGCTTAGTGAAAGAAGCGTATGAATACATTAAGGACATGCCTGTTCAGCCCAATGCTGTTATTTGGAGGACCTTATTAGGATCATGCACAATACAAGGGCAATCGGCCTTTGGGGAGATTGCAAGAGGCCACATTCTCCAGTTAGAACCTAGACATAGTGGGGATTATGTGCTGATCTCCAATCTCTACGCATCTGAGCGTCGATGGTCGGATGTGCAAAAGGTGAGGAGAACAATGCTCAGTGAAGGTGTAAAGAAAACTCCGGGCTATAGTATTGTTGAGTTGAGGAACAGAGTTTTCGAGTTTACTATGGGTGATAGATCTCATCCGCAAAGTGATGAGATATATGCAAAGCTGGTAGAGATTACAAAATTACTGAAACAGAAAGGTTATGTGCCTCATACGGAGAATGTTCTTGCAGACATAGAGGAGGAAGAAAAAGAAAATGCTTTGTCCTATCACAGTGAAAAAATTGCAATTGCATTCATGCTCCTAGTTACCGCACCAGGCATACCAATTAGGATTTGGAAGAATTTGAGAGTTTGTGCAGATTGTCATCTTGCATTTAAGCTCATCTCAAAGGTTTATGATCGGGAGATTGTTGTGAGGGATCGTAGCCGATTTCACCATTTTAGAGATGGTTCTTGTTCTTGTAGTGATTACTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 X8

Protein Analysis

613

Amino Acids

69.25

Weight (kDa)

7.32

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 103 - 152 1.4e-12 PPR repeat family
PPR_2 PF13041 205 - 252 8.7e-11 PPR repeat family
PPR PF01535 207 - 237 4.2e-07 PPR repeat
E_motif PF20431 428 - 485 1e-16 E motif
Eplus_motif PF20430 491 - 515 1.3e-08 E+ motif
DYW_deaminase PF14432 521 - 613 6.8e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013500)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21065 AT4G21065
fragaria_vesca FvH4_3g09500
malus_domestica MD05G1277300.v1.1 MD10G1256200.v1.1
prunus_persica Prupe.4G087400_v2.0.a1
pyrus_communis pycom05g25840 pycom10g21200
rosa_chinensis RchiOBHm_Chr5g0015081
rosa_laevigata RLG00000032168
rosa_multiflora Rmu_co8160296.1_g000001 Rmu_sc0002209.1_g000002 Rmu_sc0009777.1_g000014 Rmu_sc0036572.1_g000001
rosa_roxburghii Rroxscaffold_1G00061450
rosa_rugosa Rorug05G0024200
rosa_samantha Rh5CG127500
rosa_wichuraiana Rw5G010250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 559
AasI GACNNNNNNGTC 1 cut(s) 404
Acc16I TGCGCA 2 cut(s) 279, 828
Acc36I ACCTGC 1 cut(s) 559
AccB1I GGYRCC 1 cut(s) 1015
AciI CCGC 6 cut(s) 88, 246, 809, 1065, 1502, 1674
AclWI GGATC 2 cut(s) 1261, 1791
AcsI RAATTY 1 cut(s) 1705
AcvI CACGTG 1 cut(s) 321
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 2 cut(s) 554, 1091
AfiI CCNNNNNNNGG 3 cut(s) 223, 224, 564
AflIII ACRYGT 1 cut(s) 549
AgsI TTSAA 7 cut(s) 69, 377, 442, 463, 655, 805, 899
AhdI GACNNNNNGTC 1 cut(s) 200
AjnI CCWGG 2 cut(s) 615, 1678
AleI CACNNNNGTG 1 cut(s) 248
AluBI AGCT 9 cut(s) 72, 144, 738, 760, 767, 985, 1166, 1528, 1744
AluI AGCT 9 cut(s) 72, 144, 738, 760, 767, 985, 1166, 1528, 1744
Alw26I GTCTC 1 cut(s) 606
AlwI GGATC 2 cut(s) 1261, 1791
AoxI GGCC 4 cut(s) 305, 662, 1278, 1300
ApeKI GCWGC 1 cut(s) 13
ApoI RAATTY 1 cut(s) 1705
AseI ATTAAT 1 cut(s) 639
AspLEI GCGC 4 cut(s) 280, 829, 844, 886
AspS9I GGNCC 3 cut(s) 306, 663, 1242
AsuC2I CCSGG 1 cut(s) 1437
AsuHPI GGTGA 6 cut(s) 16, 235, 718, 1408, 1499, 1790
AvaII GGWCC 1 cut(s) 1242
BaeGI GKGCMC 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 1015
BbrPI CACGTG 1 cut(s) 321
BbvI GCAGC 1 cut(s) 25
BccI CCATC 4 cut(s) 713, 1063, 1371, 1805
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 2 cut(s) 617, 1680
BcnI CCSGG 1 cut(s) 1437
BcoDI GTCTC 1 cut(s) 606
BfaI CTAG 4 cut(s) 834, 1167, 1323, 1667
BfmI CTRYAG 2 cut(s) 1054, 1441
BfuAI ACCTGC 1 cut(s) 559
BglII AGATCT 1 cut(s) 1493
BisI GCNGC 1 cut(s) 14
BlsI GCNGC 1 cut(s) 15
BmcAI AGTACT 1 cut(s) 1091
Bme1390I CCNGG 3 cut(s) 617, 1437, 1680
Bme18I GGWCC 1 cut(s) 1242
BmeRI GACNNNNNGTC 1 cut(s) 200
BmgT120I GGNCC 3 cut(s) 306, 663, 1242
BmiI GGNNCC 1 cut(s) 1017
BmrFI CCNGG 3 cut(s) 617, 1437, 1680
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 1 cut(s) 1373
BmuI ACTGGG 1 cut(s) 56
BpmI CTGGAG 2 cut(s) 533, 1295
BpuMI CCSGG 1 cut(s) 1437
BsaAI YACGTR 1 cut(s) 321
BsaBI GATNNNNATC 1 cut(s) 1728
BsaHI GRCGYC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 606
BsaJI CCNNGG 1 cut(s) 729
Bsc4I CCNNNNNNNGG 3 cut(s) 223, 224, 564
Bse1I ACTGG 3 cut(s) 62, 1312, 1841
Bse3DI GCAATG 2 cut(s) 492, 1060
Bse8I GATNNNNATC 1 cut(s) 1728
BseBI CCWGG 2 cut(s) 617, 1680
BseDI CCNNGG 1 cut(s) 729
BseGI GGATG 7 cut(s) 111, 260, 724, 856, 1074, 1390, 1498
BseJI GATNNNNATC 1 cut(s) 1728
BseLI CCNNNNNNNGG 3 cut(s) 223, 224, 564
BseMI GCAATG 2 cut(s) 492, 1060
BseMII CTCAG 5 cut(s) 491, 597, 1014, 1359, 1426
BseNI ACTGG 3 cut(s) 62, 1312, 1841
BseRI GAGGAG 4 cut(s) 923, 928, 1414, 1616
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 1 cut(s) 25
BsgI GTGCAG 1 cut(s) 1740
BshFI GGCC 4 cut(s) 307, 664, 1280, 1302
BshNI GGYRCC 1 cut(s) 1015
BsiSI CCGG 2 cut(s) 716, 1436
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 3 cut(s) 223, 224, 564
BsmAI GTCTC 1 cut(s) 606
BsmFI GGGAC 1 cut(s) 188
BsmI GAATGC 2 cut(s) 829, 1655
BsnI GGCC 4 cut(s) 307, 664, 1280, 1302
Bso31I GGTCTC 1 cut(s) 606
Bsp1286I GDGCHC 1 cut(s) 1128
Bsp143I GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
Bsp19I CCATGG 1 cut(s) 729
BspACI CCGC 6 cut(s) 88, 246, 809, 1065, 1502, 1674
BspANI GGCC 4 cut(s) 307, 664, 1280, 1302
BspCNI CTCAG 5 cut(s) 492, 598, 1015, 1360, 1425
BspLI GGNNCC 1 cut(s) 1017
BspMI ACCTGC 1 cut(s) 559
BspPI GGATC 2 cut(s) 1261, 1791
BspT107I GGYRCC 1 cut(s) 1015
BspTNI GGTCTC 1 cut(s) 606
BsrDI GCAATG 2 cut(s) 492, 1060
BsrI ACTGG 3 cut(s) 62, 1312, 1841
BssECI CCNNGG 1 cut(s) 729
BssMI GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
BssNI GRCGYC 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 729
Bst2UI CCWGG 2 cut(s) 617, 1680
Bst4CI ACNGT 1 cut(s) 1637
Bst6I CTCTTC 2 cut(s) 82, 157
BstACI GRCGYC 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 321
BstC8I GCNNGC 2 cut(s) 831, 1174
BstDEI CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
BstDSI CCRYGG 1 cut(s) 729
BstF5I GGATG 7 cut(s) 111, 260, 724, 856, 1074, 1390, 1498
BstHHI GCGC 4 cut(s) 280, 829, 844, 886
BstKTI GATC 5 cut(s) 1256, 1350, 1496, 1765, 1786
BstMAI GTCTC 1 cut(s) 606
BstMBI GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
BstMWI GCNNNNNNNGC 3 cut(s) 10, 839, 1219
BstNI CCWGG 2 cut(s) 617, 1680
BstNSI RCATGY 2 cut(s) 553, 1213
BstSCI CCNGG 3 cut(s) 615, 1435, 1678
BstSFI CTRYAG 2 cut(s) 1054, 1441
BstSLI GKGCMC 1 cut(s) 1128
BstV1I GCAGC 1 cut(s) 25
BstX2I RGATCY 1 cut(s) 1493
BstYI RGATCY 1 cut(s) 1493
BsuRI GGCC 4 cut(s) 307, 664, 1280, 1302
BtgI CCRYGG 1 cut(s) 729
BtsCI GGATG 7 cut(s) 111, 260, 724, 856, 1074, 1390, 1498
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 3 cut(s) 255, 1420, 1642
BveI ACCTGC 1 cut(s) 559
Cac8I GCNNGC 2 cut(s) 831, 1174
CfoI GCGC 4 cut(s) 280, 829, 844, 886
Cfr13I GGNCC 3 cut(s) 306, 663, 1242
CseI GACGC 2 cut(s) 190, 1361
CsiI ACCWGGT 1 cut(s) 615
Csp6I GTAC 2 cut(s) 553, 1090
CviAII CATG 9 cut(s) 197, 331, 550, 730, 791, 1150, 1210, 1257, 1660
CviQI GTAC 2 cut(s) 553, 1090
DdeI CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
DpnI GATC 5 cut(s) 1255, 1349, 1495, 1764, 1785
DpnII GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
DraI TTTAAA 2 cut(s) 991, 1000
DrdI GACNNNNNNGTC 1 cut(s) 404
DriI GACNNNNNGTC 1 cut(s) 200
DseDI GACNNNNNNGTC 1 cut(s) 404
Eam1104I CTCTTC 2 cut(s) 82, 157
Eam1105I GACNNNNNGTC 1 cut(s) 200
EarI CTCTTC 2 cut(s) 82, 157
Eco130I CCWWGG 1 cut(s) 729
Eco31I GGTCTC 1 cut(s) 606
Eco47I GGWCC 1 cut(s) 1242
Eco72I CACGTG 1 cut(s) 321
EcoO109I RGGNCCY 1 cut(s) 1242
EcoRII CCWGG 2 cut(s) 615, 1678
EcoT14I CCWWGG 1 cut(s) 729
EcoT22I ATGCAT 1 cut(s) 128
ErhI CCWWGG 1 cut(s) 729
FaeI CATG 9 cut(s) 200, 334, 553, 733, 794, 1153, 1213, 1260, 1663
FalI AAGNNNNNCTT 2 cut(s) 61, 93
FaqI GGGAC 1 cut(s) 188
FatI CATG 9 cut(s) 196, 330, 549, 729, 790, 1149, 1209, 1256, 1659
FauI CCCGC 3 cut(s) 95, 802, 1058
Fnu4HI GCNGC 1 cut(s) 14
FokI GGATG 7 cut(s) 98, 247, 731, 863, 1081, 1397, 1485
Fsp4HI GCNGC 1 cut(s) 14
FspAI RTGCGCAY 2 cut(s) 279, 828
FspBI CTAG 4 cut(s) 834, 1167, 1323, 1667
FspI TGCGCA 2 cut(s) 279, 828
GlaI GCGC 4 cut(s) 279, 828, 843, 885
GluI GCNGC 1 cut(s) 14
GsuI CTGGAG 2 cut(s) 533, 1295
HaeIII GGCC 4 cut(s) 307, 664, 1280, 1302
HapII CCGG 2 cut(s) 716, 1436
HgaI GACGC 2 cut(s) 190, 1361
HhaI GCGC 4 cut(s) 280, 829, 844, 886
Hin1I GRCGYC 1 cut(s) 201
Hin1II CATG 9 cut(s) 200, 334, 553, 733, 794, 1153, 1213, 1260, 1663
Hin6I GCGC 4 cut(s) 278, 827, 842, 884
HinP1I GCGC 4 cut(s) 278, 827, 842, 884
HindIII AAGCTT 1 cut(s) 70
HinfI GANTC 2 cut(s) 515, 596
HpaII CCGG 2 cut(s) 716, 1436
HphI GGTGA 6 cut(s) 16, 235, 718, 1408, 1499, 1790
Hpy166II GTNNAC 4 cut(s) 318, 726, 930, 1479
Hpy188I TCNGA 6 cut(s) 501, 607, 678, 1119, 1369, 1384
Hpy188III TCNNGA 3 cut(s) 439, 848, 1766
Hpy8I GTNNAC 4 cut(s) 318, 726, 930, 1479
Hpy99I CGWCG 1 cut(s) 1377
HpyAV CCTTC 8 cut(s) 118, 193, 436, 654, 799, 883, 1073, 1412
HpyCH4III ACNGT 1 cut(s) 1637
HpyCH4IV ACGT 1 cut(s) 320
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 839, 1219
HpyF3I CTNAG 7 cut(s) 453, 500, 606, 1023, 1177, 1368, 1412
HpySE526I ACGT 1 cut(s) 320
Hsp92I GRCGYC 1 cut(s) 201
Hsp92II CATG 9 cut(s) 200, 334, 553, 733, 794, 1153, 1213, 1260, 1663
HspAI GCGC 4 cut(s) 278, 827, 842, 884
Kzo9I GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
LmnI GCTCC 4 cut(s) 9, 764, 982, 1668
Lsp1109I GCAGC 1 cut(s) 25
LweI GCATC 1 cut(s) 1373
MabI ACCWGGT 1 cut(s) 615
MaeI CTAG 4 cut(s) 834, 1167, 1323, 1667
MaeII ACGT 1 cut(s) 320
MaeIII GTNAC 3 cut(s) 252, 395, 1669
MalI GATC 5 cut(s) 1255, 1349, 1495, 1764, 1785
MboI GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
MboII GAAGA 7 cut(s) 69, 144, 232, 493, 911, 1619, 1714
MfeI CAATTG 1 cut(s) 1650
MflI RGATCY 1 cut(s) 1493
MhlI GDGCHC 1 cut(s) 1128
MluCI AATT 8 cut(s) 157, 372, 400, 1544, 1644, 1650, 1689, 1705
MlyI GAGTC 2 cut(s) 524, 605
MmeI TCCRAC 2 cut(s) 237, 1362
Mph1103I ATGCAT 1 cut(s) 128
MseI TTAA 7 cut(s) 531, 639, 957, 990, 999, 1203, 1740
MslI CAYNNNNRTG 1 cut(s) 248
MspI CCGG 2 cut(s) 716, 1436
MspR9I CCNGG 3 cut(s) 617, 1437, 1680
MunI CAATTG 1 cut(s) 1650
Mva1269I GAATGC 2 cut(s) 829, 1655
MvaI CCWGG 2 cut(s) 617, 1680
MwoI GCNNNNNNNGC 3 cut(s) 10, 839, 1219
NciI CCSGG 1 cut(s) 1437
NcoI CCATGG 1 cut(s) 729
NdeII GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
NlaIII CATG 9 cut(s) 200, 334, 553, 733, 794, 1153, 1213, 1260, 1663
NlaIV GGNNCC 1 cut(s) 1017
NmeAIII GCCGAG 2 cut(s) 373, 781
NmuCI GTSAC 2 cut(s) 252, 395
NsbI TGCGCA 2 cut(s) 279, 828
NsiI ATGCAT 1 cut(s) 128
NspI RCATGY 2 cut(s) 553, 1213
OliI CACNNNNGTG 1 cut(s) 248
PaqCI CACCTGC 1 cut(s) 559
PciI ACATGT 1 cut(s) 549
PctI GAATGC 2 cut(s) 829, 1655
PkrI GCNGC 1 cut(s) 15
PleI GAGTC 2 cut(s) 523, 604
PmaCI CACGTG 1 cut(s) 321
PmlI CACGTG 1 cut(s) 321
PpsI GAGTC 2 cut(s) 523, 604
Ppu21I YACGTR 1 cut(s) 321
PpuMI RGGWCCY 1 cut(s) 1242
PscI ACATGT 1 cut(s) 549
PshBI ATTAAT 1 cut(s) 639
Psp5II RGGWCCY 1 cut(s) 1242
Psp6I CCWGG 2 cut(s) 615, 1678
PspCI CACGTG 1 cut(s) 321
PspGI CCWGG 2 cut(s) 615, 1678
PspN4I GGNNCC 1 cut(s) 1017
PspPI GGNCC 3 cut(s) 306, 663, 1242
PspPPI RGGWCCY 1 cut(s) 1242
PsuI RGATCY 1 cut(s) 1493
RsaI GTAC 2 cut(s) 554, 1091
RsaNI GTAC 2 cut(s) 553, 1090
RseI CAYNNNNRTG 1 cut(s) 248
SaqAI TTAA 7 cut(s) 531, 639, 957, 990, 999, 1203, 1740
SatI GCNGC 1 cut(s) 14
Sau3AI GATC 5 cut(s) 1253, 1347, 1493, 1762, 1783
Sau96I GGNCC 3 cut(s) 306, 663, 1242
ScaI AGTACT 1 cut(s) 1091
SchI GAGTC 2 cut(s) 524, 605
ScrFI CCNGG 3 cut(s) 617, 1437, 1680
SduI GDGCHC 1 cut(s) 1128
SexAI ACCWGGT 1 cut(s) 615
SfaNI GCATC 1 cut(s) 1373
SfcI CTRYAG 2 cut(s) 1054, 1441
SinI GGWCC 1 cut(s) 1242
SmiMI CAYNNNNRTG 1 cut(s) 248
Sse9I AATT 8 cut(s) 157, 372, 400, 1544, 1644, 1650, 1689, 1705
SsiI CCGC 6 cut(s) 88, 246, 809, 1065, 1502, 1674
SspMI CTAG 4 cut(s) 834, 1167, 1323, 1667
StyD4I CCNGG 3 cut(s) 615, 1435, 1678
StyI CCWWGG 1 cut(s) 729
TaaI ACNGT 1 cut(s) 1637
TaiI ACGT 1 cut(s) 323
TaqI TCGA 3 cut(s) 408, 1375, 1473
TasI AATT 8 cut(s) 157, 372, 400, 1544, 1644, 1650, 1689, 1705
TatI WGTACW 1 cut(s) 1089
Tru1I TTAA 7 cut(s) 531, 639, 957, 990, 999, 1203, 1740
Tru9I TTAA 7 cut(s) 531, 639, 957, 990, 999, 1203, 1740
TscAI CASTG 3 cut(s) 255, 1420, 1642
TseFI GTSAC 2 cut(s) 252, 395
TseI GCWGC 1 cut(s) 13
Tsp45I GTSAC 2 cut(s) 252, 395
TspDTI ATGAA 6 cut(s) 100, 779, 1092, 1118, 1209, 1648
TspGWI ACGGA 1 cut(s) 1592
TspRI CASTG 3 cut(s) 255, 1420, 1642
VpaK11BI GGWCC 1 cut(s) 1242
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 1 cut(s) 1705
XceI RCATGY 2 cut(s) 553, 1213
XcmI CCANNNNNNNNNTGG 3 cut(s) 220, 1695, 1808
XspI CTAG 4 cut(s) 834, 1167, 1323, 1667
ZrmI AGTACT 1 cut(s) 1091
Zsp2I ATGCAT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.