Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21065 AT4G21065 |
| fragaria_vesca | FvH4_3g09500 |
| malus_domestica | MD05G1277300.v1.1 MD10G1256200.v1.1 |
| prunus_persica | Prupe.4G087400_v2.0.a1 |
| pyrus_communis | pycom05g25840 pycom10g21200 |
| rosa_chinensis | RchiOBHm_Chr5g0015081 |
| rosa_laevigata | RLG00000032168 |
| rosa_multiflora | Rmu_co8160296.1_g000001 Rmu_sc0002209.1_g000002 Rmu_sc0009777.1_g000014 Rmu_sc0036572.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00061450 |
| rosa_rugosa | Rorug05G0024200 |
| rosa_samantha | Rh5CG127500 |
| rosa_wichuraiana | Rw5G010250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 337 |
| Acc36I | ACCTGC | 1 cut(s) | 337 |
| AciI | CCGC | 1 cut(s) | 24 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AfaI | GTAC | 1 cut(s) | 332 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 342 |
| AflIII | ACRYGT | 1 cut(s) | 327 |
| AgsI | TTSAA | 5 cut(s) | 155, 220, 241, 374, 433 |
| AleI | CACNNNNGTG | 1 cut(s) | 26 |
| AluBI | AGCT | 1 cut(s) | 516 |
| AluI | AGCT | 1 cut(s) | 516 |
| Alw26I | GTCTC | 1 cut(s) | 384 |
| AoxI | GGCC | 2 cut(s) | 83, 440 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| AseI | ATTAAT | 1 cut(s) | 417 |
| AspS9I | GGNCC | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 2 cut(s) | 13, 496 |
| BccI | CCATC | 1 cut(s) | 491 |
| BceAI | ACGGC | 1 cut(s) | 320 |
| BcoDI | GTCTC | 1 cut(s) | 384 |
| BfuAI | ACCTGC | 1 cut(s) | 337 |
| BmgT120I | GGNCC | 1 cut(s) | 84 |
| BpmI | CTGGAG | 1 cut(s) | 311 |
| BsaI | GGTCTC | 1 cut(s) | 384 |
| BsaJI | CCNNGG | 1 cut(s) | 507 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 342 |
| BseDI | CCNNGG | 1 cut(s) | 507 |
| BseGI | GGATG | 2 cut(s) | 38, 502 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 342 |
| BseMII | CTCAG | 2 cut(s) | 269, 375 |
| BshFI | GGCC | 2 cut(s) | 85, 442 |
| BsiSI | CCGG | 1 cut(s) | 494 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 342 |
| BsmAI | GTCTC | 1 cut(s) | 384 |
| BsnI | GGCC | 2 cut(s) | 85, 442 |
| Bso31I | GGTCTC | 1 cut(s) | 384 |
| Bsp19I | CCATGG | 1 cut(s) | 507 |
| BspACI | CCGC | 1 cut(s) | 24 |
| BspANI | GGCC | 2 cut(s) | 85, 442 |
| BspCNI | CTCAG | 2 cut(s) | 270, 376 |
| BspMI | ACCTGC | 1 cut(s) | 337 |
| BspTNI | GGTCTC | 1 cut(s) | 384 |
| BssECI | CCNNGG | 1 cut(s) | 507 |
| BssT1I | CCWWGG | 1 cut(s) | 507 |
| BstDEI | CTNAG | 3 cut(s) | 231, 278, 384 |
| BstDSI | CCRYGG | 1 cut(s) | 507 |
| BstF5I | GGATG | 2 cut(s) | 38, 502 |
| BstMAI | GTCTC | 1 cut(s) | 384 |
| BstNSI | RCATGY | 1 cut(s) | 331 |
| BsuRI | GGCC | 2 cut(s) | 85, 442 |
| BtgI | CCRYGG | 1 cut(s) | 507 |
| BtsCI | GGATG | 2 cut(s) | 38, 502 |
| BtsI | GCAGTG | 1 cut(s) | 33 |
| BtsIMutI | CAGTG | 1 cut(s) | 33 |
| BveI | ACCTGC | 1 cut(s) | 337 |
| Cfr13I | GGNCC | 1 cut(s) | 84 |
| Csp6I | GTAC | 1 cut(s) | 331 |
| CviAII | CATG | 4 cut(s) | 99, 109, 328, 508 |
| CviQI | GTAC | 1 cut(s) | 331 |
| DdeI | CTNAG | 3 cut(s) | 231, 278, 384 |
| Eco130I | CCWWGG | 1 cut(s) | 507 |
| Eco147I | AGGCCT | 1 cut(s) | 442 |
| Eco31I | GGTCTC | 1 cut(s) | 384 |
| EcoRI | GAATTC | 1 cut(s) | 178 |
| EcoT14I | CCWWGG | 1 cut(s) | 507 |
| ErhI | CCWWGG | 1 cut(s) | 507 |
| FaeI | CATG | 4 cut(s) | 102, 112, 331, 511 |
| FaiI | YATR | 9 cut(s) | 54, 100, 110, 201, 205, 329, 361, 461, 509 |
| FatI | CATG | 4 cut(s) | 98, 108, 327, 507 |
| FokI | GGATG | 2 cut(s) | 25, 509 |
| GsuI | CTGGAG | 1 cut(s) | 311 |
| HaeIII | GGCC | 2 cut(s) | 85, 442 |
| HapII | CCGG | 1 cut(s) | 494 |
| Hin1II | CATG | 4 cut(s) | 102, 112, 331, 511 |
| HinfI | GANTC | 3 cut(s) | 151, 293, 374 |
| HpaII | CCGG | 1 cut(s) | 494 |
| HphI | GGTGA | 2 cut(s) | 13, 496 |
| Hpy166II | GTNNAC | 2 cut(s) | 96, 504 |
| Hpy188I | TCNGA | 3 cut(s) | 279, 385, 456 |
| Hpy188III | TCNNGA | 1 cut(s) | 217 |
| Hpy8I | GTNNAC | 2 cut(s) | 96, 504 |
| HpyAV | CCTTC | 2 cut(s) | 214, 432 |
| HpyCH4V | TGCA | 1 cut(s) | 359 |
| HpyF3I | CTNAG | 3 cut(s) | 231, 278, 384 |
| Hsp92II | CATG | 4 cut(s) | 102, 112, 331, 511 |
| LpnPI | CCDG | 4 cut(s) | 159, 275, 332, 507 |
| MaeIII | GTNAC | 1 cut(s) | 30 |
| MboII | GAAGA | 2 cut(s) | 10, 271 |
| MluCI | AATT | 1 cut(s) | 178 |
| MlyI | GAGTC | 1 cut(s) | 302 |
| MnlI | CCTC | 6 cut(s) | 23, 110, 244, 358, 442, 475 |
| MseI | TTAA | 2 cut(s) | 309, 417 |
| MslI | CAYNNNNRTG | 1 cut(s) | 26 |
| MspI | CCGG | 1 cut(s) | 494 |
| NcoI | CCATGG | 1 cut(s) | 507 |
| NlaIII | CATG | 4 cut(s) | 102, 112, 331, 511 |
| NmeAIII | GCCGAG | 1 cut(s) | 151 |
| NmuCI | GTSAC | 1 cut(s) | 30 |
| NspI | RCATGY | 1 cut(s) | 331 |
| OliI | CACNNNNGTG | 1 cut(s) | 26 |
| PaqCI | CACCTGC | 1 cut(s) | 337 |
| PceI | AGGCCT | 1 cut(s) | 442 |
| PciI | ACATGT | 1 cut(s) | 327 |
| PfeI | GAWTC | 2 cut(s) | 151, 374 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| PscI | ACATGT | 1 cut(s) | 327 |
| PshBI | ATTAAT | 1 cut(s) | 417 |
| PspPI | GGNCC | 1 cut(s) | 84 |
| RsaI | GTAC | 1 cut(s) | 332 |
| RsaNI | GTAC | 1 cut(s) | 331 |
| RseI | CAYNNNNRTG | 1 cut(s) | 26 |
| SaqAI | TTAA | 2 cut(s) | 309, 417 |
| Sau96I | GGNCC | 1 cut(s) | 84 |
| SchI | GAGTC | 1 cut(s) | 302 |
| SetI | ASST | 5 cut(s) | 15, 351, 369, 396, 518 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 26 |
| Sse9I | AATT | 1 cut(s) | 178 |
| SseBI | AGGCCT | 1 cut(s) | 442 |
| SsiI | CCGC | 1 cut(s) | 24 |
| StuI | AGGCCT | 1 cut(s) | 442 |
| StyI | CCWWGG | 1 cut(s) | 507 |
| TaqI | TCGA | 1 cut(s) | 186 |
| TasI | AATT | 1 cut(s) | 178 |
| TfiI | GAWTC | 2 cut(s) | 151, 374 |
| Tru1I | TTAA | 2 cut(s) | 309, 417 |
| Tru9I | TTAA | 2 cut(s) | 309, 417 |
| TscAI | CASTG | 1 cut(s) | 33 |
| TseFI | GTSAC | 1 cut(s) | 30 |
| Tsp45I | GTSAC | 1 cut(s) | 30 |
| TspGWI | ACGGA | 1 cut(s) | 259 |
| TspRI | CASTG | 1 cut(s) | 33 |
| VspI | ATTAAT | 1 cut(s) | 417 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 331 |