RLG00000033766

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
31872737 .. 31876585
3849 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033766

Sequence Viewer

Length: 1599 bp
ATGCAGCTTCATATATCACCCAGCTTGAGGCATGTGACAGTTTTCCCAGGGAAGGAAGTTAGAGAATTCATCAAGGTGAAAGTCGGATCGAGACGGCTTTCGTATCGGATGCTCTTCTATTCCATTCTCTTCTTCACATTCATTCTCAGGTTTGTGTTTGTCATGACAGCAGTGGACACCATTGATGGAGAAACCAGGTGCTCTACAATAGGTTGCTTGGGGAAAAAACTGGGACCAAGGATATTGGGAAGAAGGCTTGAAAGTGTCCCAGAAGTTGTTTACCAAGTATTAGAAGAACCCATTGGCAAAGATGAATTACAAGGAAGATCTGATATTCCCCAATCCCTAGATGAGTTTATGACTGAGATAAAGGACAGCAACATAGACGCAAGGACTTTTGCTGTCAAGCTCAGAGAGATGGTTACACTACTTGAGGAAAGAACCAGAAATGCGAAAATCCAAGAGTACTTGTACAGGCATGTAGCATCAAGCAGCATACCTAAACAGCTTCACTGCCTAGCCTTGAGGTTGGCCAACGAACACTCAACCAATGCGGCCGCTCGTCTCCAGCTCCCGTCTGCTGAATTTGTCCCTGCCCTTGTCGATAACTCCTTCTTCCACTTTGTCCTCGCCTCAGACAATGTCCTTGCCGCTTCTGTTGTTGCCACTTCCCTGGTCCAAAACTCATTGCGCCCTCACAAAGTTGTCCTCCACATAATCACAGACAGGAAGACATACTGTCCAATGCAAGCATGGTTTTCGTTGCATCCTTTATCCCCTGCGATTATTGAGGTCAAGGCATTACACCATTTTGATTGGTTTTCAAAGGGAAAGGTGCCAGTGTTGGAAGCAATGGAGAAAGACCAAAAAGTGAGATCACAGTTCAGAGGAGGGTCATCAGCCATTGTGGCAAACAATTCTGATAAGCCTAATGTCATTGCAGCAAAGTTGCAGGCACTTAGTCCCAAGTATAATTCAATCATGAATCATATCAGAATACATCTACCAGAGATGTTTCCTAGTCTCAACAAGGTTGTGTTCCTGGATGATGACGTAGTAGTTCAGACTGATCTTTCCCCACTGTGGGATATTGATATGAATGGAAAGGTCAACGGAGCGGTTGAAACATGCAGGGGAAAAGATAAATTTGTTATGTCGAAGAAGTTTAAGAGCTACCTGAACTTCTCCCATCCTTTGATATCGAACAACTTCGACCCCAATACATGTGCATGGGCTTATGGCATGAACATATTCGATCTAGAGGCTTGGAGGAAAACTAACATAAGCCGTACATATCACTATTGGATTGAACAGAACTTGAAATCAGACCTGAGTTTGTGGCAGCTAGGAACATTACCCCCTGGCCTAATAGCATTCCATGGCCATGTCCATGTTATTGATCCTTTTTGGCACATGCTGGGATTTGGATATCAGGAAAACATAAGTTCTGCCGATGCCAAGAGTGCAGGTGTCATCCATTTTAATGGGAGGGCAAAGCCGTGGTTAGAGATTGCATTTCCCAATCTTCGGCCACTTTGGGCAAAGTATATAGACTTCTCCGATAAATTCATCAAGGGCTGTCATATTAGGGCATCTTAG

Protein Analysis

533

Amino Acids

60.55

Weight (kDa)

9.15

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 208 - 504 1.2e-72 Glycosyl transferase family 8
Glyco_transf_24 PF18404 329 - 383 3.7e-06 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013111)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1457
Acc36I ACCTGC 1 cut(s) 1457
AccB1I GGYRCC 1 cut(s) 835
AccBSI CCGCTC 2 cut(s) 560, 1118
AciI CCGC 4 cut(s) 554, 558, 651, 1118
AclWI GGATC 2 cut(s) 94, 1394
AcoI YGGCCR 4 cut(s) 531, 555, 1381, 1529
AcsI RAATTY 4 cut(s) 65, 584, 1145, 1565
AfaI GTAC 3 cut(s) 467, 473, 1291
AfiI CCNNNNNNNGG 5 cut(s) 27, 52, 1083, 1084, 1527
AflIII ACRYGT 1 cut(s) 1223
AgsI TTSAA 6 cut(s) 260, 825, 978, 1124, 1310, 1321
AhdI GACNNNNNGTC 1 cut(s) 738
AjnI CCWGG 5 cut(s) 46, 194, 672, 1041, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 285, 317
AluBI AGCT 7 cut(s) 7, 24, 409, 508, 571, 1173, 1345
AluI AGCT 7 cut(s) 7, 24, 409, 508, 571, 1173, 1345
Alw21I GWGCWC 1 cut(s) 203
Alw26I GTCTC 3 cut(s) 85, 569, 1028
AlwI GGATC 2 cut(s) 94, 1394
AoxI GGCC 5 cut(s) 531, 555, 1363, 1381, 1529
ApeKI GCWGC 4 cut(s) 4, 492, 941, 1342
ApoI RAATTY 4 cut(s) 65, 584, 1145, 1565
Asp700I GAANNNNTTC 2 cut(s) 1208, 1250
AspLEI GCGC 1 cut(s) 693
AspS9I GGNCC 2 cut(s) 233, 676
AsuHPI GGTGA 2 cut(s) 9, 88
AvaII GGWCC 2 cut(s) 233, 676
BalI TGGCCA 2 cut(s) 533, 1383
BanI GGYRCC 1 cut(s) 835
BarI GAAGNNNNNNTAC 2 cut(s) 1538, 1570
BbsI GAAGAC 1 cut(s) 737
Bbv12I GWGCWC 1 cut(s) 203
BbvI GCAGC 4 cut(s) 16, 504, 953, 1354
BccI CCATC 3 cut(s) 179, 412, 1197
BceAI ACGGC 3 cut(s) 110, 1272, 1483
BcgI CGANNNNNNTGC 2 cut(s) 741, 775
BciT130I CCWGG 5 cut(s) 48, 196, 674, 1043, 1362
BcoDI GTCTC 3 cut(s) 85, 569, 1028
BfaI CTAG 5 cut(s) 347, 518, 1020, 1259, 1346
BfuAI ACCTGC 1 cut(s) 1457
BglI GCCNNNNNGGC 1 cut(s) 908
BglII AGATCT 1 cut(s) 326
BisI GCNGC 7 cut(s) 5, 493, 555, 558, 651, 942, 1343
BlsI GCNGC 7 cut(s) 6, 494, 556, 559, 652, 943, 1344
BmcAI AGTACT 1 cut(s) 467
Bme1390I CCNGG 5 cut(s) 48, 196, 674, 1043, 1362
Bme18I GGWCC 2 cut(s) 233, 676
BmeRI GACNNNNNGTC 1 cut(s) 738
BmgT120I GGNCC 2 cut(s) 233, 676
BmiI GGNNCC 2 cut(s) 234, 837
BmrFI CCNGG 5 cut(s) 48, 196, 674, 1043, 1362
BmrI ACTGGG 1 cut(s) 239
BmsI GCATC 4 cut(s) 99, 494, 775, 1444
BmuI ACTGGG 1 cut(s) 239
BpiI GAAGAC 1 cut(s) 737
BpmI CTGGAG 1 cut(s) 551
BpuEI CTTGAG 3 cut(s) 46, 452, 544
BsaJI CCNNGG 7 cut(s) 46, 47, 236, 672, 1360, 1378, 1499
Bsc4I CCNNNNNNNGG 5 cut(s) 27, 52, 1083, 1084, 1527
Bse1I ACTGG 2 cut(s) 234, 839
Bse3DI GCAATG 3 cut(s) 686, 858, 936
BseBI CCWGG 5 cut(s) 48, 196, 674, 1043, 1362
BseDI CCNNGG 7 cut(s) 46, 47, 236, 672, 1360, 1378, 1499
BseGI GGATG 5 cut(s) 114, 766, 1051, 1189, 1473
BseLI CCNNNNNNNGG 5 cut(s) 27, 52, 1083, 1084, 1527
BseMI GCAATG 3 cut(s) 686, 858, 936
BseMII CTCAG 5 cut(s) 160, 354, 424, 648, 1322
BseNI ACTGG 2 cut(s) 234, 839
BseRI GAGGAG 1 cut(s) 903
BseX3I CGGCCG 1 cut(s) 555
BseXI GCAGC 4 cut(s) 16, 504, 953, 1354
BseYI CCCAGC 2 cut(s) 20, 1417
BsgI GTGCAG 1 cut(s) 1485
Bsh1285I CGRYCG 1 cut(s) 558
BshFI GGCC 5 cut(s) 533, 557, 1365, 1383, 1531
BshNI GGYRCC 1 cut(s) 835
BsiEI CGRYCG 1 cut(s) 558
BsiHKAI GWGCWC 1 cut(s) 203
BslFI GGGAC 4 cut(s) 246, 251, 575, 948
BslI CCNNNNNNNGG 5 cut(s) 27, 52, 1083, 1084, 1527
BsmAI GTCTC 3 cut(s) 85, 569, 1028
BsmBI CGTCTC 2 cut(s) 85, 569
BsmFI GGGAC 4 cut(s) 246, 251, 575, 948
BsmI GAATGC 1 cut(s) 1373
BsnI GGCC 5 cut(s) 533, 557, 1365, 1383, 1531
Bsp1286I GDGCHC 1 cut(s) 203
Bsp1407I TGTACA 1 cut(s) 471
Bsp143I GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
Bsp19I CCATGG 1 cut(s) 1378
BspACI CCGC 4 cut(s) 554, 558, 651, 1118
BspANI GGCC 5 cut(s) 533, 557, 1365, 1383, 1531
BspCNI CTCAG 5 cut(s) 159, 355, 423, 647, 1323
BspHI TCATGA 2 cut(s) 162, 981
BspLI GGNNCC 2 cut(s) 234, 837
BspMI ACCTGC 1 cut(s) 1457
BspPI GGATC 2 cut(s) 94, 1394
BspQI GCTCTTC 1 cut(s) 119
BspT107I GGYRCC 1 cut(s) 835
BsrBI CCGCTC 2 cut(s) 560, 1118
BsrDI GCAATG 3 cut(s) 686, 858, 936
BsrGI TGTACA 1 cut(s) 471
BsrI ACTGG 2 cut(s) 234, 839
BssECI CCNNGG 7 cut(s) 46, 47, 236, 672, 1360, 1378, 1499
BssMI GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
BssT1I CCWWGG 2 cut(s) 236, 1378
Bst2UI CCWGG 5 cut(s) 48, 196, 674, 1043, 1362
Bst4CI ACNGT 4 cut(s) 40, 740, 882, 1083
Bst6I CTCTTC 2 cut(s) 119, 134
BstAUI TGTACA 1 cut(s) 471
BstC8I GCNNGC 2 cut(s) 750, 954
BstDEI CTNAG 7 cut(s) 146, 363, 410, 634, 959, 1331, 1596
BstDSI CCRYGG 2 cut(s) 1378, 1499
BstF5I GGATG 5 cut(s) 114, 766, 1051, 1189, 1473
BstHHI GCGC 1 cut(s) 693
BstKTI GATC 6 cut(s) 89, 329, 878, 1072, 1258, 1402
BstMAI GTCTC 3 cut(s) 85, 569, 1028
BstMBI GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
BstMCI CGRYCG 1 cut(s) 558
BstMWI GCNNNNNNNGC 2 cut(s) 908, 1463
BstNI CCWGG 5 cut(s) 48, 196, 674, 1043, 1362
BstNSI RCATGY 5 cut(s) 35, 482, 1131, 1227, 1417
BstSCI CCNGG 5 cut(s) 46, 194, 672, 1041, 1360
BstV1I GCAGC 4 cut(s) 16, 504, 953, 1354
BstV2I GAAGAC 1 cut(s) 737
BstX2I RGATCY 1 cut(s) 326
BstXI CCANNNNNNTGG 2 cut(s) 673, 1484
BstYI RGATCY 1 cut(s) 326
BstZI CGGCCG 1 cut(s) 555
BsuRI GGCC 5 cut(s) 533, 557, 1365, 1383, 1531
BtgI CCRYGG 2 cut(s) 1378, 1499
BtsCI GGATG 5 cut(s) 114, 766, 1051, 1189, 1473
BtsI GCAGTG 2 cut(s) 177, 511
BtsIMutI CAGTG 4 cut(s) 177, 511, 846, 1079
BveI ACCTGC 1 cut(s) 1457
Cac8I GCNNGC 2 cut(s) 750, 954
CciI TCATGA 2 cut(s) 162, 981
CciNI GCGGCCGC 1 cut(s) 555
CfoI GCGC 1 cut(s) 693
Cfr13I GGNCC 2 cut(s) 233, 676
CseI GACGC 1 cut(s) 395
CsiI ACCWGGT 1 cut(s) 194
Csp6I GTAC 3 cut(s) 466, 472, 1290
CviQI GTAC 3 cut(s) 466, 472, 1290
DdeI CTNAG 7 cut(s) 146, 363, 410, 634, 959, 1331, 1596
DpnI GATC 6 cut(s) 88, 328, 877, 1071, 1257, 1401
DpnII GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
DriI GACNNNNNGTC 1 cut(s) 738
EaeI YGGCCR 4 cut(s) 531, 555, 1381, 1529
EagI CGGCCG 1 cut(s) 555
Eam1104I CTCTTC 2 cut(s) 119, 134
Eam1105I GACNNNNNGTC 1 cut(s) 738
EarI CTCTTC 2 cut(s) 119, 134
EclXI CGGCCG 1 cut(s) 555
Eco130I CCWWGG 2 cut(s) 236, 1378
Eco32I GATATC 2 cut(s) 1200, 1430
Eco47I GGWCC 2 cut(s) 233, 676
Eco52I CGGCCG 1 cut(s) 555
EcoRI GAATTC 1 cut(s) 65
EcoRII CCWGG 5 cut(s) 46, 194, 672, 1041, 1360
EcoRV GATATC 2 cut(s) 1200, 1430
EcoT14I CCWWGG 2 cut(s) 236, 1378
ErhI CCWWGG 2 cut(s) 236, 1378
Esp3I CGTCTC 2 cut(s) 85, 569
FaqI GGGAC 4 cut(s) 246, 251, 575, 948
Fnu4HI GCNGC 7 cut(s) 5, 493, 555, 558, 651, 942, 1343
FokI GGATG 5 cut(s) 121, 753, 1058, 1176, 1460
Fsp4HI GCNGC 7 cut(s) 5, 493, 555, 558, 651, 942, 1343
FspBI CTAG 5 cut(s) 347, 518, 1020, 1259, 1346
GlaI GCGC 1 cut(s) 692
GluI GCNGC 7 cut(s) 5, 493, 555, 558, 651, 942, 1343
GsaI CCCAGC 2 cut(s) 24, 1421
GsuI CTGGAG 1 cut(s) 551
HaeIII GGCC 5 cut(s) 533, 557, 1365, 1383, 1531
HgaI GACGC 1 cut(s) 395
HhaI GCGC 1 cut(s) 693
Hin6I GCGC 1 cut(s) 691
HinP1I GCGC 1 cut(s) 691
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HinfI GANTC 1 cut(s) 985
HphI GGTGA 2 cut(s) 9, 88
Hpy166II GTNNAC 3 cut(s) 175, 280, 1111
Hpy188III TCNNGA 5 cut(s) 90, 163, 982, 1259, 1433
Hpy8I GTNNAC 3 cut(s) 175, 280, 1111
HpyAV CCTTC 3 cut(s) 46, 246, 622
HpyCH4III ACNGT 4 cut(s) 40, 740, 882, 1083
HpyCH4IV ACGT 1 cut(s) 1053
HpyCH4V TGCA 9 cut(s) 4, 748, 766, 941, 952, 1131, 1229, 1466, 1514
HpyF10VI GCNNNNNNNGC 2 cut(s) 908, 1463
HpyF3I CTNAG 7 cut(s) 146, 363, 410, 634, 959, 1331, 1596
HpySE526I ACGT 1 cut(s) 1053
HspAI GCGC 1 cut(s) 691
Kzo9I GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
LguI GCTCTTC 1 cut(s) 119
LmnI GCTCC 2 cut(s) 576, 1115
Lsp1109I GCAGC 4 cut(s) 16, 504, 953, 1354
LweI GCATC 4 cut(s) 99, 494, 775, 1444
MabI ACCWGGT 1 cut(s) 194
MaeI CTAG 5 cut(s) 347, 518, 1020, 1259, 1346
MaeII ACGT 1 cut(s) 1053
MaeIII GTNAC 2 cut(s) 34, 421
MalI GATC 6 cut(s) 88, 328, 877, 1071, 1257, 1401
MbiI CCGCTC 2 cut(s) 560, 1118
MboI GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
MflI RGATCY 1 cut(s) 326
MhlI GDGCHC 1 cut(s) 203
MlsI TGGCCA 2 cut(s) 533, 1383
MluCI AATT 7 cut(s) 65, 314, 584, 916, 973, 1145, 1565
MluNI TGGCCA 2 cut(s) 533, 1383
MmeI TCCRAC 2 cut(s) 64, 825
Mox20I TGGCCA 2 cut(s) 533, 1383
MroXI GAANNNNTTC 2 cut(s) 1208, 1250
MscI TGGCCA 2 cut(s) 533, 1383
MseI TTAA 2 cut(s) 1167, 1482
MslI CAYNNNNRTG 5 cut(s) 74, 1228, 1383, 1389, 1482
Msp20I TGGCCA 2 cut(s) 533, 1383
MspR9I CCNGG 5 cut(s) 48, 196, 674, 1043, 1362
Mva1269I GAATGC 1 cut(s) 1373
MvaI CCWGG 5 cut(s) 48, 196, 674, 1043, 1362
MwoI GCNNNNNNNGC 2 cut(s) 908, 1463
NcoI CCATGG 1 cut(s) 1378
NdeII GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
NlaIV GGNNCC 2 cut(s) 234, 837
NmuCI GTSAC 1 cut(s) 34
NotI GCGGCCGC 1 cut(s) 555
NspI RCATGY 5 cut(s) 35, 482, 1131, 1227, 1417
PagI TCATGA 2 cut(s) 162, 981
PaqCI CACCTGC 1 cut(s) 1457
PasI CCCWGGG 1 cut(s) 47
PciI ACATGT 1 cut(s) 1223
PciSI GCTCTTC 1 cut(s) 119
PctI GAATGC 1 cut(s) 1373
PdmI GAANNNNTTC 2 cut(s) 1208, 1250
PfeI GAWTC 1 cut(s) 985
PflFI GACNNNGTC 1 cut(s) 641
PfoI TCCNGGA 1 cut(s) 1041
PkrI GCNGC 7 cut(s) 6, 494, 556, 559, 652, 943, 1344
PscI ACATGT 1 cut(s) 1223
Psp6I CCWGG 5 cut(s) 46, 194, 672, 1041, 1360
PspFI CCCAGC 2 cut(s) 20, 1417
PspGI CCWGG 5 cut(s) 46, 194, 672, 1041, 1360
PspN4I GGNNCC 2 cut(s) 234, 837
PspPI GGNCC 2 cut(s) 233, 676
PsuI RGATCY 1 cut(s) 326
PsyI GACNNNGTC 1 cut(s) 641
RsaI GTAC 3 cut(s) 467, 473, 1291
RsaNI GTAC 3 cut(s) 466, 472, 1290
RseI CAYNNNNRTG 5 cut(s) 74, 1228, 1383, 1389, 1482
SapI GCTCTTC 1 cut(s) 119
SaqAI TTAA 2 cut(s) 1167, 1482
SatI GCNGC 7 cut(s) 5, 493, 555, 558, 651, 942, 1343
Sau3AI GATC 6 cut(s) 86, 326, 875, 1069, 1255, 1399
Sau96I GGNCC 2 cut(s) 233, 676
ScaI AGTACT 1 cut(s) 467
ScrFI CCNGG 5 cut(s) 48, 196, 674, 1043, 1362
SduI GDGCHC 1 cut(s) 203
SexAI ACCWGGT 1 cut(s) 194
SfaNI GCATC 4 cut(s) 99, 494, 775, 1444
SinI GGWCC 2 cut(s) 233, 676
SmiMI CAYNNNNRTG 5 cut(s) 74, 1228, 1383, 1389, 1482
SmlI CTYRAG 3 cut(s) 25, 431, 523
SmoI CTYRAG 3 cut(s) 25, 431, 523
Sse9I AATT 7 cut(s) 65, 314, 584, 916, 973, 1145, 1565
SsiI CCGC 4 cut(s) 554, 558, 651, 1118
SspMI CTAG 5 cut(s) 347, 518, 1020, 1259, 1346
StyD4I CCNGG 5 cut(s) 46, 194, 672, 1041, 1360
StyI CCWWGG 2 cut(s) 236, 1378
TaaI ACNGT 4 cut(s) 40, 740, 882, 1083
TaiI ACGT 1 cut(s) 1056
TaqI TCGA 6 cut(s) 89, 603, 1157, 1202, 1212, 1254
TasI AATT 7 cut(s) 65, 314, 584, 916, 973, 1145, 1565
TatI WGTACW 2 cut(s) 465, 471
TauI GCSGC 3 cut(s) 557, 560, 653
TfiI GAWTC 1 cut(s) 985
Tru1I TTAA 2 cut(s) 1167, 1482
Tru9I TTAA 2 cut(s) 1167, 1482
TscAI CASTG 4 cut(s) 177, 518, 846, 1086
TseFI GTSAC 1 cut(s) 34
TseI GCWGC 4 cut(s) 4, 492, 941, 1342
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 7 cut(s) 58, 130, 327, 998, 1112, 1259, 1558
TspGWI ACGGA 1 cut(s) 1128
TspRI CASTG 4 cut(s) 177, 518, 846, 1086
Tth111I GACNNNGTC 1 cut(s) 641
VpaK11BI GGWCC 2 cut(s) 233, 676
XapI RAATTY 4 cut(s) 65, 584, 1145, 1565
XbaI TCTAGA 1 cut(s) 1258
XceI RCATGY 5 cut(s) 35, 482, 1131, 1227, 1417
XcmI CCANNNNNNNNNTGG 1 cut(s) 750
XmnI GAANNNNTTC 2 cut(s) 1208, 1250
XspI CTAG 5 cut(s) 347, 518, 1020, 1259, 1346
ZrmI AGTACT 1 cut(s) 467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.