RLG00000035446

Essential component of the vacuolar proton pump (V- ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0009092
Physical Location & Seq
Forward (+)
67027361 .. 67036732
9372 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035446

Sequence Viewer

Length: 2031 bp
ATGGAGAAGTTCCTGGACAAGTTGCCCTCCATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGTCGAGTCTGCTCACCGCACCATTTCCTATCTCGGCGAAATCGGCCTCCTCCAATTCCGTGACTTAAACGCTGATAAAAGCCCTTTCCAGCTAACCTTTGTTAATCAGGTGAAGCGATGTGCAGAGATGTCAAGAAAGCTGCGCTTTTTTAAGGATCAAATCAGTAAAGCTGGTCTGCTTGGGTCTATACGTCCAGTTTCACAACCAGATATTGAGTTGGAGGAATTAGAGTTTCAACTTGGTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGCGAAAGACTTCGACAATCATACAATGAGCTCCTGGAGTTCAAGATGGTATTACAAAAGGCAAGTGGCTTTCTTGTTTCAAGTAATAGCCATGCTGTCACAGAGGAAACAGAACTAGAAGAGAATGTTTACTCAATGAATGACTATGGTGATTCAGTGTCATTGCTGGAGCAGGTTGAGCAGACAGTTTTTGTAGTCTTCTTCTCAGGGTTGCAGGCAAAAGCAAAGATTCTGAAAATTTGTGAGGCCTTTGGTGCAAATTGCTACCCTGTTCCTGAAGACATAACTAAGCAGAGGCAAATAACTAGAGAAGTTTCATCACGTCTTGCTGAATTGGAAGCAACTTTGGATGCAGGGATTCGCCACAGAAATAAGGCCCTTACTTCTGTAGGGTTTCACCTGGCAAAATGGATGAACATGGTAAGAAGGGAGAAAGCTGTATATGATACATTGAACATGTTAAACTTTGATGTTACCAAAAAATGCCTTGTTGGAGAAGGCTGGTGTCCTATATTTGCAAAAACAAAGATTCAGGAGGCATTGCAACGTGCAACATTTGATAGCAATTCACAAAAACTCGGGAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTACTTCTTTTAATGTCTCTGTTCTCAATTTACTGTGGGTTGATTTACAATGAGTTCTTCTCTGTCCCTTTTCACATATTTGGTGGGTCTGCTTACAAATGCAGAGATGCTTCTTGCAGTGATGCACACACTGTTGGCTTAATCAAGTACAGAGATCCATATCCATTTGGTGTGGATCCTAGTTGGCGTGGAAGTCGTTCAGAACTGCCCTTTTTGAATTCTCTCAAAATGAAATTGTCTATTTTGTTGGGTGTGGCGCAAATGAACGTAGGAATTATTCTCAGTTACTTCAATGCACGGTTTTTCAGCAGCTCAATTGATATAAGGTACCAGTTTGTGCCGCAGATGATCTTCCTTAACAGTCTTTTTGGATATCTTTCACTTCTAGTTGTCATCAAGTGGTGCACCGGCTCTAAGGCTGACCTCTATCATGTAATGATTTACATGTTCTTAAGTCCAACTGATGATCTGGGGGAAAATCAATTGTTTTGGGGCCAAAGACCACTTCAGATCATTTTGTTACTCTTGGCTCTAATTGCAGTCCCCTGGATGCTCTTTCCAAAACCTTTCATTTTGAGGAAGCGTCATACAGAGAGGTTTCAAGGTCGCACATATGGGATGCTTGGTACCTCTGAAATGGATCTTGACGTGGAAACTGATCCTGTGAGGCAACATCATGAGGAGTTTAATTTCAGTGAGGTGTTTGTGCACCAGATGATACACTCCATAGAGTTTGTTCTTGGTGCTGTTTCAAATACGGCGTCCTACCTTCGATTGTGGGCTTTGAGCTTGGCCCACTCAGAGTTGTCAACTGTGTTCTATGAGAAAGTCCTTCTCCTCGCCTGGGGGTATGACAGCTTTATCATCCGGTTAATTGGGTTAGCAGTTTTTGCCTTTGCAACTGCCTTCATATTGCTCATGATGGAGACACTCAGCGCTTTTCTTCATGCCTTGCGTCTTCATTGGGTGGAATTTCAAAATAAGTTCTACCTTGGTGATGGGTATAAGTTCAAACCTTTTTCCTTCGCCTCCATAGCTACTGAGGATGAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005798 GO:0005802 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0007035 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0012505 GO:0012506 GO:0012510 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0016043 GO:0016462 GO:0016469 GO:0016471 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019725 GO:0019829 GO:0019899 GO:0022607 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030641 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032588 GO:0032991 GO:0033176 GO:0034220 GO:0034622 GO:0034641 GO:0034654 GO:0036442 GO:0042470 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045851 GO:0046034 GO:0046390 GO:0046483 GO:0046961 GO:0048770 GO:0048878 GO:0050801 GO:0051117 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0055086 GO:0065003 GO:0065007 GO:0065008 GO:0070070 GO:0070071 GO:0070072 GO:0071704 GO:0071840 GO:0072521 GO:0072522 GO:0090407 GO:0090662 GO:0097708 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098791 GO:0098796 GO:0098805 GO:0099131 GO:0099132 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04142 ko04145 ko04721 ko04966 ko05110 ko05120 ko05152 ko05165 ko05323 map00190 map01100 map04142 map04145 map04721 map04966 map05110 map05120 map05152 map05165 map05323
Pfam Domains
Protein Families
V_ATPase_I

Protein Analysis

677

Amino Acids

77.64

Weight (kDa)

6.06

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
V_ATPase_I PF01496 37 - 158 1.3e-24 V-type ATPase 116kDa subunit family
V_ATPase_I PF01496 176 - 311 1.6e-37 V-type ATPase 116kDa subunit family
V_ATPase_I PF01496 310 - 667 4.2e-146 V-type ATPase 116kDa subunit family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 523
Acc65I GGTACC 2 cut(s) 1302, 1601
AccB1I GGYRCC 2 cut(s) 1302, 1601
AciI CCGC 2 cut(s) 97, 1316
AclWI GGATC 7 cut(s) 42, 243, 1124, 1145, 1158, 1623, 1628
AcsI RAATTY 3 cut(s) 597, 1192, 1946
AcuI CTGAAG 2 cut(s) 657, 1466
AcyI GRCGYC 1 cut(s) 1736
AfaI GTAC 4 cut(s) 978, 1124, 1304, 1603
AfeI AGCGCT 1 cut(s) 1912
AfiI CCNNNNNNNGG 1 cut(s) 1819
AflII CTTAAG 1 cut(s) 1426
AflIII ACRYGT 2 cut(s) 816, 1419
AjiI CACGTC 2 cut(s) 683, 1624
AjnI CCWGG 5 cut(s) 12, 393, 759, 1520, 1817
AjuI GAANNNNNNNTTGG 2 cut(s) 1464, 1496
Alw21I GWGCWC 3 cut(s) 393, 1382, 1686
Alw26I GTCTC 2 cut(s) 996, 1895
Alw44I GTGCAC 2 cut(s) 1378, 1682
AlwI GGATC 7 cut(s) 42, 243, 1124, 1145, 1158, 1623, 1628
Ama87I CYCGRG 1 cut(s) 938
Aor51HI AGCGCT 1 cut(s) 1912
AoxI GGCC 5 cut(s) 124, 606, 735, 1468, 1767
ApaLI GTGCAC 2 cut(s) 1378, 1682
ApeKI GCWGC 2 cut(s) 220, 1284
ApoI RAATTY 3 cut(s) 597, 1192, 1946
ArsI GACNNNNNNTTYG 2 cut(s) 1721, 1753
Asp700I GAANNNNTTC 2 cut(s) 369, 1171
Asp718I GGTACC 2 cut(s) 1302, 1601
AspLEI GCGC 5 cut(s) 45, 225, 972, 1234, 1913
AspS9I GGNCC 3 cut(s) 736, 1468, 1768
AsuHPI GGTGA 6 cut(s) 86, 202, 335, 521, 749, 1982
AvaI CYCGRG 1 cut(s) 938
BaeGI GKGCMC 2 cut(s) 1382, 1686
BamHI GGATCC 1 cut(s) 1150
BanI GGYRCC 2 cut(s) 1302, 1601
BanII GRGCYC 1 cut(s) 393
BbsI GAAGAC 3 cut(s) 550, 645, 1925
Bbv12I GWGCWC 3 cut(s) 393, 1382, 1686
BbvI GCAGC 2 cut(s) 207, 1296
BccI CCATC 3 cut(s) 400, 1891, 1967
BceAI ACGGC 1 cut(s) 1749
BciT130I CCWGG 5 cut(s) 14, 395, 761, 1522, 1819
BcoDI GTCTC 2 cut(s) 996, 1895
BfaI CTAG 4 cut(s) 476, 666, 1155, 1361
BfmI CTRYAG 1 cut(s) 747
BfoI RGCGCY 2 cut(s) 973, 1914
BfrI CTTAAG 1 cut(s) 1426
BfuAI ACCTGC 1 cut(s) 523
BisI GCNGC 3 cut(s) 221, 1285, 1316
BlsI GCNGC 3 cut(s) 222, 1286, 1317
Bme1390I CCNGG 5 cut(s) 14, 395, 761, 1522, 1819
BmeT110I CYCGRG 1 cut(s) 938
BmgBI CACGTC 2 cut(s) 683, 1624
BmgT120I GGNCC 3 cut(s) 736, 1468, 1768
BmiI GGNNCC 4 cut(s) 1152, 1304, 1469, 1603
BmrFI CCNGG 5 cut(s) 14, 395, 761, 1522, 1819
BmsI GCATC 7 cut(s) 30, 700, 945, 1072, 1087, 1515, 1584
BoxI GACNNNNGTC 1 cut(s) 62
BpiI GAAGAC 3 cut(s) 550, 645, 1925
BplI GAGNNNNNCTC 2 cut(s) 1019, 1051
BpmI CTGGAG 2 cut(s) 416, 548
BsaBI GATNNNNATC 1 cut(s) 1134
BsaHI GRCGYC 1 cut(s) 1736
BsaJI CCNNGG 4 cut(s) 30, 1520, 1818, 1966
BsaWI WCCGGW 1 cut(s) 1842
Bsc4I CCNNNNNNNGG 1 cut(s) 1819
Bse118I RCCGGY 1 cut(s) 1382
Bse1I ACTGG 2 cut(s) 275, 1306
Bse3DI GCAATG 2 cut(s) 521, 899
Bse8I GATNNNNATC 1 cut(s) 1134
BseBI CCWGG 5 cut(s) 14, 395, 761, 1522, 1819
BseDI CCNNGG 4 cut(s) 30, 1520, 1818, 1966
BseGI GGATG 7 cut(s) 75, 715, 777, 1530, 1599, 1839, 2026
BseJI GATNNNNATC 1 cut(s) 1134
BseLI CCNNNNNNNGG 1 cut(s) 1819
BseMI GCAATG 2 cut(s) 521, 899
BseMII CTCAG 5 cut(s) 579, 1270, 1788, 1921, 2007
BseNI ACTGG 2 cut(s) 275, 1306
BseRI GAGGAG 3 cut(s) 119, 1670, 1802
BseSI GKGCMC 2 cut(s) 1382, 1686
BseXI GCAGC 2 cut(s) 207, 1296
BsgI GTGCAG 1 cut(s) 222
BshFI GGCC 5 cut(s) 126, 608, 737, 1470, 1769
BshNI GGYRCC 2 cut(s) 1302, 1601
BsiHKAI GWGCWC 3 cut(s) 393, 1382, 1686
BsiHKCI CYCGRG 1 cut(s) 938
BsiSI CCGG 2 cut(s) 1383, 1843
BslFI GGGAC 2 cut(s) 1025, 1502
BslI CCNNNNNNNGG 1 cut(s) 1819
BsmAI GTCTC 2 cut(s) 996, 1895
BsmFI GGGAC 2 cut(s) 1025, 1502
BsnI GGCC 5 cut(s) 126, 608, 737, 1470, 1769
BsoBI CYCGRG 1 cut(s) 938
Bsp1286I GDGCHC 3 cut(s) 393, 1382, 1686
Bsp143I GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 2 cut(s) 97, 1316
BspANI GGCC 5 cut(s) 126, 608, 737, 1470, 1769
BspCNI CTCAG 5 cut(s) 578, 1269, 1787, 1920, 2008
BspHI TCATGA 2 cut(s) 1651, 1893
BspLI GGNNCC 4 cut(s) 1152, 1304, 1469, 1603
BspMI ACCTGC 1 cut(s) 523
BspPI GGATC 7 cut(s) 42, 243, 1124, 1145, 1158, 1623, 1628
BspT107I GGYRCC 2 cut(s) 1302, 1601
BspTI CTTAAG 1 cut(s) 1426
BsrDI GCAATG 2 cut(s) 521, 899
BsrFI RCCGGY 1 cut(s) 1382
BsrI ACTGG 2 cut(s) 275, 1306
BssAI RCCGGY 1 cut(s) 1382
BssECI CCNNGG 4 cut(s) 30, 1520, 1818, 1966
BssMI GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
BssNI GRCGYC 1 cut(s) 1736
BssT1I CCWWGG 2 cut(s) 30, 1966
Bst2UI CCWGG 5 cut(s) 14, 395, 761, 1522, 1819
Bst4CI ACNGT 6 cut(s) 547, 1010, 1108, 1275, 1337, 1789
Bst6I CTCTTC 1 cut(s) 474
BstACI GRCGYC 1 cut(s) 1736
BstAFI CTTAAG 1 cut(s) 1426
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstC8I GCNNGC 1 cut(s) 576
BstDEI CTNAG 7 cut(s) 565, 648, 1256, 1389, 1774, 1907, 2016
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 7 cut(s) 75, 715, 777, 1530, 1599, 1839, 2026
BstH2I RGCGCY 2 cut(s) 973, 1914
BstHHI GCGC 5 cut(s) 45, 225, 972, 1234, 1913
BstKTI GATC 9 cut(s) 37, 238, 1132, 1153, 1326, 1444, 1488, 1618, 1636
BstMAI GTCTC 2 cut(s) 996, 1895
BstMBI GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
BstMWI GCNNNNNNNGC 6 cut(s) 123, 538, 614, 1511, 1865, 2009
BstNI CCWGG 5 cut(s) 14, 395, 761, 1522, 1819
BstNSI RCATGY 2 cut(s) 820, 1423
BstPAI GACNNNNGTC 1 cut(s) 62
BstSCI CCNGG 5 cut(s) 12, 393, 759, 1520, 1817
BstSFI CTRYAG 1 cut(s) 747
BstSLI GKGCMC 2 cut(s) 1382, 1686
BstV1I GCAGC 2 cut(s) 207, 1296
BstV2I GAAGAC 3 cut(s) 550, 645, 1925
BstX2I RGATCY 4 cut(s) 34, 1129, 1150, 1615
BstYI RGATCY 4 cut(s) 34, 1129, 1150, 1615
BsuRI GGCC 5 cut(s) 126, 608, 737, 1470, 1769
BtgI CCRYGG 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 211
BtrI CACGTC 2 cut(s) 683, 1624
BtsCI GGATG 7 cut(s) 75, 715, 777, 1530, 1599, 1839, 2026
BtsI GCAGTG 1 cut(s) 1099
BtsIMutI CAGTG 4 cut(s) 522, 1099, 1104, 1675
BveI ACCTGC 1 cut(s) 523
Cac8I GCNNGC 1 cut(s) 576
CciI TCATGA 2 cut(s) 1651, 1893
CfoI GCGC 5 cut(s) 45, 225, 972, 1234, 1913
Cfr10I RCCGGY 1 cut(s) 1382
Cfr13I GGNCC 3 cut(s) 736, 1468, 1768
CseI GACGC 3 cut(s) 1547, 1725, 1919
Csp6I GTAC 4 cut(s) 977, 1123, 1303, 1602
CviQI GTAC 4 cut(s) 977, 1123, 1303, 1602
DdeI CTNAG 7 cut(s) 565, 648, 1256, 1389, 1774, 1907, 2016
DpnI GATC 9 cut(s) 36, 237, 1131, 1152, 1325, 1443, 1487, 1617, 1635
DpnII GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
Eam1104I CTCTTC 1 cut(s) 474
EarI CTCTTC 1 cut(s) 474
Ecl136II GAGCTC 1 cut(s) 391
Eco130I CCWWGG 2 cut(s) 30, 1966
Eco147I AGGCCT 1 cut(s) 608
Eco24I GRGCYC 1 cut(s) 393
Eco32I GATATC 1 cut(s) 1349
Eco47III AGCGCT 1 cut(s) 1912
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 2 cut(s) 657, 1466
Eco88I CYCGRG 1 cut(s) 938
EcoICRI GAGCTC 1 cut(s) 391
EcoO109I RGGNCCY 1 cut(s) 736
EcoRI GAATTC 1 cut(s) 1192
EcoRII CCWGG 5 cut(s) 12, 393, 759, 1520, 1817
EcoRV GATATC 1 cut(s) 1349
EcoT14I CCWWGG 2 cut(s) 30, 1966
EcoT38I GRGCYC 1 cut(s) 393
ErhI CCWWGG 2 cut(s) 30, 1966
FalI AAGNNNNNCTT 4 cut(s) 44, 76, 209, 241
FaqI GGGAC 2 cut(s) 1025, 1502
FauNDI CATATG 1 cut(s) 1588
Fnu4HI GCNGC 3 cut(s) 221, 1285, 1316
FokI GGATG 6 cut(s) 62, 722, 784, 1537, 1606, 1826
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 3 cut(s) 221, 1285, 1316
FspBI CTAG 4 cut(s) 476, 666, 1155, 1361
GlaI GCGC 5 cut(s) 44, 224, 971, 1233, 1912
GluI GCNGC 3 cut(s) 221, 1285, 1316
GsuI CTGGAG 2 cut(s) 416, 548
HaeII RGCGCY 2 cut(s) 973, 1914
HaeIII GGCC 5 cut(s) 126, 608, 737, 1470, 1769
HapII CCGG 2 cut(s) 1383, 1843
HgaI GACGC 3 cut(s) 1547, 1725, 1919
HhaI GCGC 5 cut(s) 45, 225, 972, 1234, 1913
Hin1I GRCGYC 1 cut(s) 1736
Hin6I GCGC 5 cut(s) 43, 223, 970, 1232, 1911
HinP1I GCGC 5 cut(s) 43, 223, 970, 1232, 1911
HincII GTYRAC 1 cut(s) 1785
HindII GTYRAC 1 cut(s) 1785
HinfI GANTC 5 cut(s) 86, 512, 589, 718, 889
HpaII CCGG 2 cut(s) 1383, 1843
HphI GGTGA 6 cut(s) 86, 202, 335, 521, 749, 1982
Hpy166II GTNNAC 4 cut(s) 490, 1380, 1684, 1785
Hpy188I TCNGA 7 cut(s) 39, 49, 594, 1177, 1485, 1609, 1777
Hpy188III TCNNGA 8 cut(s) 213, 403, 635, 893, 940, 1619, 1652, 1894
Hpy8I GTNNAC 4 cut(s) 490, 1380, 1684, 1785
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 7 cut(s) 70, 780, 851, 1754, 1817, 1891, 2008
HpyCH4III ACNGT 6 cut(s) 547, 1010, 1108, 1275, 1337, 1789
HpyCH4IV ACGT 5 cut(s) 271, 682, 907, 1242, 1623
HpyF10VI GCNNNNNNNGC 6 cut(s) 123, 538, 614, 1511, 1865, 2009
HpyF3I CTNAG 7 cut(s) 565, 648, 1256, 1389, 1774, 1907, 2016
HpySE526I ACGT 5 cut(s) 271, 682, 907, 1242, 1623
Hsp92I GRCGYC 1 cut(s) 1736
HspAI GCGC 5 cut(s) 43, 223, 970, 1232, 1911
KpnI GGTACC 2 cut(s) 1306, 1605
Kzo9I GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
LmnI GCTCC 4 cut(s) 50, 396, 529, 942
Lsp1109I GCAGC 2 cut(s) 207, 1296
LweI GCATC 7 cut(s) 30, 700, 945, 1072, 1087, 1515, 1584
MaeI CTAG 4 cut(s) 476, 666, 1155, 1361
MaeII ACGT 5 cut(s) 271, 682, 907, 1242, 1623
MaeIII GTNAC 5 cut(s) 140, 457, 832, 1259, 1494
MalI GATC 9 cut(s) 36, 237, 1131, 1152, 1325, 1443, 1487, 1617, 1635
MboI GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
MboII GAAGA 9 cut(s) 64, 491, 550, 553, 650, 1024, 1318, 1910, 1925
MfeI CAATTG 2 cut(s) 1290, 1457
MflI RGATCY 4 cut(s) 34, 1129, 1150, 1615
MhlI GDGCHC 3 cut(s) 393, 1382, 1686
MlyI GAGTC 1 cut(s) 95
MmeI TCCRAC 3 cut(s) 279, 832, 1457
MroXI GAANNNNTTC 2 cut(s) 369, 1171
MslI CAYNNNNRTG 1 cut(s) 333
MspCI CTTAAG 1 cut(s) 1426
MspI CCGG 2 cut(s) 1383, 1843
MspR9I CCNGG 5 cut(s) 14, 395, 761, 1522, 1819
MunI CAATTG 2 cut(s) 1290, 1457
MvaI CCWGG 5 cut(s) 14, 395, 761, 1522, 1819
MwoI GCNNNNNNNGC 6 cut(s) 123, 538, 614, 1511, 1865, 2009
NcoI CCATGG 1 cut(s) 30
NdeI CATATG 1 cut(s) 1588
NdeII GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
NlaIV GGNNCC 4 cut(s) 1152, 1304, 1469, 1603
NmeAIII GCCGAG 1 cut(s) 93
NmuCI GTSAC 2 cut(s) 140, 457
NspI RCATGY 2 cut(s) 820, 1423
PagI TCATGA 2 cut(s) 1651, 1893
PceI AGGCCT 1 cut(s) 608
PciI ACATGT 2 cut(s) 816, 1419
PdmI GAANNNNTTC 2 cut(s) 369, 1171
PfeI GAWTC 4 cut(s) 512, 589, 718, 889
PfoI TCCNGGA 2 cut(s) 12, 393
PkrI GCNGC 3 cut(s) 222, 1286, 1317
PleI GAGTC 1 cut(s) 94
PpsI GAGTC 1 cut(s) 94
PscI ACATGT 2 cut(s) 816, 1419
PshAI GACNNNNGTC 1 cut(s) 62
Psp124BI GAGCTC 1 cut(s) 393
Psp6I CCWGG 5 cut(s) 12, 393, 759, 1520, 1817
PspGI CCWGG 5 cut(s) 12, 393, 759, 1520, 1817
PspN4I GGNNCC 4 cut(s) 1152, 1304, 1469, 1603
PspPI GGNCC 3 cut(s) 736, 1468, 1768
PsuI RGATCY 4 cut(s) 34, 1129, 1150, 1615
RsaI GTAC 4 cut(s) 978, 1124, 1304, 1603
RsaNI GTAC 4 cut(s) 977, 1123, 1303, 1602
RseI CAYNNNNRTG 1 cut(s) 333
SacI GAGCTC 1 cut(s) 393
SatI GCNGC 3 cut(s) 221, 1285, 1316
Sau3AI GATC 9 cut(s) 34, 235, 1129, 1150, 1323, 1441, 1485, 1615, 1633
Sau96I GGNCC 3 cut(s) 736, 1468, 1768
SchI GAGTC 1 cut(s) 95
ScrFI CCNGG 5 cut(s) 14, 395, 761, 1522, 1819
SduI GDGCHC 3 cut(s) 393, 1382, 1686
SfaNI GCATC 7 cut(s) 30, 700, 945, 1072, 1087, 1515, 1584
SfcI CTRYAG 1 cut(s) 747
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 1 cut(s) 1426
SmoI CTYRAG 1 cut(s) 1426
SseBI AGGCCT 1 cut(s) 608
SsiI CCGC 2 cut(s) 97, 1316
SspMI CTAG 4 cut(s) 476, 666, 1155, 1361
SstI GAGCTC 1 cut(s) 393
StuI AGGCCT 1 cut(s) 608
StyD4I CCNGG 5 cut(s) 12, 393, 759, 1520, 1817
StyI CCWWGG 2 cut(s) 30, 1966
TaaI ACNGT 6 cut(s) 547, 1010, 1108, 1275, 1337, 1789
TaiI ACGT 5 cut(s) 274, 685, 910, 1245, 1626
TaqI TCGA 3 cut(s) 84, 373, 1747
TatI WGTACW 2 cut(s) 976, 1122
TauI GCSGC 1 cut(s) 1318
TfiI GAWTC 4 cut(s) 512, 589, 718, 889
TscAI CASTG 4 cut(s) 522, 1099, 1111, 1675
TseFI GTSAC 2 cut(s) 140, 457
TseI GCWGC 2 cut(s) 220, 1284
Tsp45I GTSAC 2 cut(s) 140, 457
TspGWI ACGGA 1 cut(s) 128
TspRI CASTG 4 cut(s) 522, 1099, 1111, 1675
Vha464I CTTAAG 1 cut(s) 1426
VneI GTGCAC 2 cut(s) 1378, 1682
XapI RAATTY 3 cut(s) 597, 1192, 1946
XceI RCATGY 2 cut(s) 820, 1423
XmnI GAANNNNTTC 2 cut(s) 369, 1171
XspI CTAG 4 cut(s) 476, 666, 1155, 1361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.