RLG00000035524

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0016455
Physical Location & Seq
Reverse (-)
67977454 .. 67988358
10905 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035524

Sequence Viewer

Length: 2115 bp
ATGCAGGTTGCTGTTGGTGATATTGTATACATTGAAGCAAACAGTGGGGCAGTAAAAAGGGTAGGCAGAGTTGATGCATTTACTGCAGAATTCGATCTTGAAGCAGAAGAGTATGTTCCACTTCCAAAAGGAGAGGTTCACAAAGAGGAGATTGTGCAGGATGTAACTCTGCACGATCTAGATGCGAATGCACGACCTCAAGGTGGGCTAGACATATTATGTCTAATGGGTCCAATGATGAAGCCAAGAAAAACAGAAACTACAGACAAATTGCGACAAGAAATAAACAAGGTCATGCAGGAACAAGATACTGGTGTAGCTCTGCATTTGAAGAGGCTTGTAAAAGAAACTTTTTTCCTTGAATTTTTCAAGAACCTTTGGGCAGGAAGGAATCCATTCCATTCCTTGAATGTAGATAGACTAGCATTTTTCCGGGCGTTTAAAGACTGCTTTCTTTGGGCATTGCATAATGTTTCAAGATGTTGCAATGGAGTGGATTCCATCAGTGATTTTCGAGCAACTATTGCTGAAAAAAATTCTGGCATTTATTTGCTGAATCATGATTTGCTCTCAGCTTTGTCTGCAGAATTTCAGGAGAATTGTCAGAATTTCTTTCAGCATGCTAGTAACATGGAAAGAGAACGTGAGTACGCCGAGCTAGTTATTCAGTTTATAACATTACTTGAAGAACAAGCAATGCAGAATGGTGGGAGTTGGCCTTTGGCTTCTGTAGTTGGACCAATGGGGGAAGATACATTCCTGCATATGTTCAACATAAGTTTTGTTCGATGGTGTCTCAGTGGGAGTAGTTGCTCCATAAATGCTTGTCTTGACCTGTTACTCGCATTGCTTGACGATGAATATTTCTCTGAGCAGCAAGATAGTGATCCCTATGAGAAACAAAATCTGCTAGACCAACTTCTTTGCGAAGGTGATGGATGGCCTTTGCCAGTTTCGGATTTCGCCAGGCCAGAGGGATTAGTTGCCAGGGACATCTCTGCTGACCCTGATTTATTTGATTCATGTGGGACCACCAACTTTGCATTCACATATGGAACAAGCGTATTTGCTATTGTTGACTGTAGGTCGACGGACGAGAAAGATCATGACATTACTCTAGACGGGACCTACAAGTATTTGAACTTCGATAGCATTTTGCCCAACATAGTTGGGACAAAATCTGGCAATGATTGGGCGTGCAAACAGATGGAGAAAGCAATCTATGAGCTGGTTGAAGAATCTAGACGTATATCCATTGAAGAACTTGCAAGATTCGCCTTTGACTTTTTAAAGACAAAAGCGAATGCTGAAGGCATTGACGACGAGACAAAGGAAAATTTTTTAAGAGCCTCGACTATCTTAGCCACCGTCGACTCACAGAACACCGGCCCCAAAACATTCCAGCCTGATGAGTGGGCAACTGGTGGATCTGGAGGTGGATACGCAAGAACGGCCTTTCAATCTAGGAGTGATTACCACAAATTGAGCGATGAAGAATGCATCAGCTGGGCACAAATAGTGATGGCATATGCAACGTTTAAAGACCCTCACACCGGTGGCCCCGCACGCGCCTGCCATATCACCAAGGATGGGGTGGTTCATATTGATAAAGATCCACTGCGCATTTACTTGGAAAATTATGTAGCATTTAAGACACTAGAGGACAGGATCTACATTCAGGAGGCTGGGTATCGTGACACAAAACCTGAGCATTACAGAAACGCGACTCTCTTTATTCTCAGACACTCATACAGAAATCTCTCATATGCTGACATGATGCATCACATCAGGCTAATAAGTGATGCTGATATGCGATTAGGATGTTCATGGGGAACACTGGGAGATACACATATGGAGCTCACATCAATCACATTCACTGGTGACGCTGCCACCGCATGTGAGACTGCAGATGCTTTGTGTGAGGCAGCAAATGATGCACGAGCACAGTATGAGTCACGAGCTAGAAACCATCGTCGGGATCGTCAGCCTAAGCAAAGGCCGAAACACCACTACAATTTACCGTGGCTTGTTCATGGGGAGAGCAGAGAGTTTATTTTGGTGGGTAGAGGTGTAGATGCTCATCTGAGAGAGAGGATACTCGCAGACCTGACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

705

Amino Acids

79.74

Weight (kDa)

5.06

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIP49 PF06068 2 - 102 1.9e-26 TIP49 P-loop domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 674
Acc16I TGCGCA 1 cut(s) 1622
AccI GTMKAC 3 cut(s) 27, 1088, 1371
AccII CGCG 2 cut(s) 1569, 1724
AciI CCGC 2 cut(s) 1563, 1893
AclI AACGTT 1 cut(s) 1535
AclWI GGATC 5 cut(s) 881, 1435, 1607, 1676, 1986
AcsI RAATTY 6 cut(s) 89, 362, 535, 587, 607, 1336
AcuI CTGAAG 1 cut(s) 1329
AfaI GTAC 1 cut(s) 650
AfiI CCNNNNNNNGG 4 cut(s) 203, 1553, 1590, 1975
AgeI ACCGGT 1 cut(s) 1553
AhdI GACNNNNNGTC 1 cut(s) 1084
AjnI CCWGG 2 cut(s) 965, 986
AjuI GAANNNNNNNTTGG 2 cut(s) 1028, 1060
AleI CACNNNNGTG 1 cut(s) 1554
AluBI AGCT 7 cut(s) 320, 575, 658, 1228, 1506, 1858, 1961
AluI AGCT 7 cut(s) 320, 575, 658, 1228, 1506, 1858, 1961
Alw21I GWGCWC 2 cut(s) 1860, 1945
Alw26I GTCTC 3 cut(s) 800, 1319, 1895
AlwI GGATC 5 cut(s) 881, 1435, 1607, 1676, 1986
AoxI GGCC 7 cut(s) 716, 941, 968, 1387, 1452, 1558, 1997
ApeKI GCWGC 3 cut(s) 874, 1886, 1925
ApoI RAATTY 6 cut(s) 89, 362, 535, 587, 607, 1336
AsiGI ACCGGT 1 cut(s) 1553
Asp700I GAANNNNTTC 1 cut(s) 395
AspLEI GCGC 2 cut(s) 1571, 1623
AspS9I GGNCC 6 cut(s) 230, 737, 1029, 1125, 1388, 1559
AsuC2I CCSGG 1 cut(s) 434
AsuHPI GGTGA 4 cut(s) 29, 944, 1573, 1892
AvaII GGWCC 4 cut(s) 230, 737, 1029, 1125
BaeGI GKGCMC 1 cut(s) 1513
BaeI ACNNNNGTAYC 2 cut(s) 300, 333
BanII GRGCYC 1 cut(s) 1860
BarI GAAGNNNNNNTAC 2 cut(s) 1127, 1159
BauI CACGAG 2 cut(s) 1938, 1956
Bbv12I GWGCWC 2 cut(s) 1860, 1945
BbvI GCAGC 3 cut(s) 886, 1873, 1937
BccI CCATC 8 cut(s) 509, 783, 929, 933, 1201, 1516, 1583, 1977
BceAI ACGGC 1 cut(s) 1467
BcgI CGANNNNNNTGC 2 cut(s) 164, 198
BciT130I CCWGG 2 cut(s) 967, 988
BciVI GTATCC 2 cut(s) 1433, 2088
BcnI CCSGG 1 cut(s) 434
BcoDI GTCTC 3 cut(s) 800, 1319, 1895
BfmI CTRYAG 6 cut(s) 84, 261, 582, 729, 1081, 1905
BfuI GTATCC 2 cut(s) 1433, 2088
BisI GCNGC 3 cut(s) 875, 1887, 1926
BlsI GCNGC 3 cut(s) 876, 1888, 1927
Bme1390I CCNGG 3 cut(s) 434, 967, 988
Bme18I GGWCC 4 cut(s) 230, 737, 1029, 1125
BmeRI GACNNNNNGTC 1 cut(s) 1084
BmgT120I GGNCC 6 cut(s) 230, 737, 1029, 1125, 1388, 1559
BmiI GGNNCC 5 cut(s) 231, 1030, 1126, 1390, 1561
BmrFI CCNGG 3 cut(s) 434, 967, 988
BmrI ACTGGG 1 cut(s) 1847
BmsI GCATC 9 cut(s) 64, 172, 1509, 1767, 1789, 1792, 1900, 1924, 2065
BmuI ACTGGG 1 cut(s) 1847
BpmI CTGGAG 1 cut(s) 1452
Bpu10I CCTNAGC 2 cut(s) 1707, 1989
BpuEI CTTGAG 1 cut(s) 183
BpuMI CCSGG 1 cut(s) 434
BsaBI GATNNNNATC 3 cut(s) 885, 1611, 2079
BsaJI CCNNGG 3 cut(s) 987, 1584, 2021
BsaWI WCCGGW 1 cut(s) 1553
BsaXI ACNNNNNCTCC 2 cut(s) 1673, 1703
Bsc4I CCNNNNNNNGG 4 cut(s) 203, 1553, 1590, 1975
Bse118I RCCGGY 2 cut(s) 1385, 1553
Bse1I ACTGG 5 cut(s) 316, 950, 1426, 1842, 1882
Bse3DI GCAATG 5 cut(s) 461, 493, 702, 845, 1192
Bse8I GATNNNNATC 3 cut(s) 885, 1611, 2079
BseBI CCWGG 2 cut(s) 967, 988
BseDI CCNNGG 3 cut(s) 987, 1584, 2021
BseGI GGATG 4 cut(s) 166, 944, 1594, 1826
BseJI GATNNNNATC 3 cut(s) 885, 1611, 2079
BseLI CCNNNNNNNGG 4 cut(s) 203, 1553, 1590, 1975
BseMI GCAATG 5 cut(s) 461, 493, 702, 845, 1192
BseMII CTCAG 6 cut(s) 585, 811, 861, 1698, 1753, 2075
BseNI ACTGG 5 cut(s) 316, 950, 1426, 1842, 1882
BseRI GAGGAG 1 cut(s) 161
BseSI GKGCMC 1 cut(s) 1513
BseXI GCAGC 3 cut(s) 886, 1873, 1937
BseYI CCCAGC 2 cut(s) 1506, 1685
BsgI GTGCAG 2 cut(s) 155, 176
Bsh1236I CGCG 2 cut(s) 1569, 1724
BshFI GGCC 7 cut(s) 718, 943, 970, 1389, 1454, 1560, 1999
BshTI ACCGGT 1 cut(s) 1553
BsiHKAI GWGCWC 2 cut(s) 1860, 1945
BsiSI CCGG 3 cut(s) 433, 1386, 1554
BslFI GGGAC 4 cut(s) 1004, 1042, 1138, 1186
BslI CCNNNNNNNGG 4 cut(s) 203, 1553, 1590, 1975
BsmAI GTCTC 3 cut(s) 800, 1319, 1895
BsmFI GGGAC 4 cut(s) 1004, 1042, 1138, 1186
BsmI GAATGC 4 cut(s) 193, 1043, 1309, 1502
BsnI GGCC 7 cut(s) 718, 943, 970, 1389, 1454, 1560, 1999
Bsp1286I GDGCHC 3 cut(s) 1513, 1860, 1945
Bsp143I GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
BspACI CCGC 2 cut(s) 1563, 1893
BspANI GGCC 7 cut(s) 718, 943, 970, 1389, 1454, 1560, 1999
BspCNI CTCAG 6 cut(s) 584, 810, 862, 1699, 1752, 2076
BspFNI CGCG 2 cut(s) 1569, 1724
BspHI TCATGA 2 cut(s) 559, 1105
BspLI GGNNCC 5 cut(s) 231, 1030, 1126, 1390, 1561
BspMAI CTGCAG 3 cut(s) 88, 586, 1909
BspPI GGATC 5 cut(s) 881, 1435, 1607, 1676, 1986
BsrDI GCAATG 5 cut(s) 461, 493, 702, 845, 1192
BsrFI RCCGGY 2 cut(s) 1385, 1553
BsrI ACTGG 5 cut(s) 316, 950, 1426, 1842, 1882
BssAI RCCGGY 2 cut(s) 1385, 1553
BssECI CCNNGG 3 cut(s) 987, 1584, 2021
BssMI GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
BssNAI GTATAC 1 cut(s) 28
BssSI CACGAG 2 cut(s) 1938, 1956
BssT1I CCWWGG 1 cut(s) 1584
Bst1107I GTATAC 1 cut(s) 28
Bst2BI CACGAG 2 cut(s) 1938, 1956
Bst2UI CCWGG 2 cut(s) 967, 988
Bst4CI ACNGT 5 cut(s) 44, 1082, 1369, 1947, 2022
Bst6I CTCTTC 2 cut(s) 102, 326
BstAPI GCANNNNNTGC 3 cut(s) 83, 524, 1934
BstC8I GCNNGC 4 cut(s) 621, 1198, 1567, 1573
BstDEI CTNAG 9 cut(s) 571, 797, 870, 1360, 1707, 1739, 1989, 2084, 2112
BstDSI CCRYGG 1 cut(s) 2021
BstF5I GGATG 4 cut(s) 166, 944, 1594, 1826
BstFNI CGCG 2 cut(s) 1569, 1724
BstHHI GCGC 2 cut(s) 1571, 1623
BstKTI GATC 8 cut(s) 97, 178, 889, 1105, 1430, 1615, 1671, 1981
BstMAI GTCTC 3 cut(s) 800, 1319, 1895
BstMBI GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
BstMWI GCNNNNNNNGC 8 cut(s) 83, 524, 581, 1274, 1451, 1566, 1892, 1934
BstNI CCWGG 2 cut(s) 967, 988
BstNSI RCATGY 2 cut(s) 623, 1899
BstSCI CCNGG 3 cut(s) 432, 965, 986
BstSFI CTRYAG 6 cut(s) 84, 261, 582, 729, 1081, 1905
BstSLI GKGCMC 1 cut(s) 1513
BstUI CGCG 2 cut(s) 1569, 1724
BstV1I GCAGC 3 cut(s) 886, 1873, 1937
BstX2I RGATCY 3 cut(s) 1427, 1612, 1668
BstYI RGATCY 3 cut(s) 1427, 1612, 1668
BstZ17I GTATAC 1 cut(s) 28
BsuI GTATCC 2 cut(s) 1433, 2088
BsuRI GGCC 7 cut(s) 718, 943, 970, 1389, 1454, 1560, 1999
BtgI CCRYGG 1 cut(s) 2021
BtgZI GCGATG 1 cut(s) 1503
BtsCI GGATG 4 cut(s) 166, 944, 1594, 1826
BtsI GCAGTG 1 cut(s) 1616
BtsIMutI CAGTG 6 cut(s) 49, 511, 805, 1616, 1835, 1875
Cac8I GCNNGC 4 cut(s) 621, 1198, 1567, 1573
CciI TCATGA 2 cut(s) 559, 1105
CfoI GCGC 2 cut(s) 1571, 1623
Cfr10I RCCGGY 2 cut(s) 1385, 1553
Cfr13I GGNCC 6 cut(s) 230, 737, 1029, 1125, 1388, 1559
CseI GACGC 1 cut(s) 1892
Csp6I GTAC 1 cut(s) 649
CspAI ACCGGT 1 cut(s) 1553
CspCI CAANNNNNGTGG 2 cut(s) 1021, 1056
CviQI GTAC 1 cut(s) 649
DdeI CTNAG 9 cut(s) 571, 797, 870, 1360, 1707, 1739, 1989, 2084, 2112
DpnI GATC 8 cut(s) 96, 177, 888, 1104, 1429, 1614, 1670, 1980
DpnII GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
DraI TTTAAA 3 cut(s) 442, 1290, 1540
DriI GACNNNNNGTC 1 cut(s) 1084
Eam1104I CTCTTC 2 cut(s) 102, 326
Eam1105I GACNNNNNGTC 1 cut(s) 1084
EarI CTCTTC 2 cut(s) 102, 326
Ecl136II GAGCTC 1 cut(s) 1858
Eco130I CCWWGG 1 cut(s) 1584
Eco24I GRGCYC 1 cut(s) 1860
Eco47I GGWCC 4 cut(s) 230, 737, 1029, 1125
Eco53kI GAGCTC 1 cut(s) 1858
Eco57I CTGAAG 1 cut(s) 1329
EcoICRI GAGCTC 1 cut(s) 1858
EcoO109I RGGNCCY 1 cut(s) 1125
EcoRI GAATTC 1 cut(s) 89
EcoRII CCWGG 2 cut(s) 965, 986
EcoT14I CCWWGG 1 cut(s) 1584
EcoT22I ATGCAT 3 cut(s) 79, 1502, 1782
EcoT38I GRGCYC 1 cut(s) 1860
ErhI CCWWGG 1 cut(s) 1584
FaqI GGGAC 4 cut(s) 1004, 1042, 1138, 1186
FauI CCCGC 1 cut(s) 1570
FauNDI CATATG 5 cut(s) 765, 1051, 1528, 1765, 1851
FblI GTMKAC 3 cut(s) 27, 1088, 1371
Fnu4HI GCNGC 3 cut(s) 875, 1887, 1926
FokI GGATG 4 cut(s) 173, 951, 1601, 1833
FriOI GRGCYC 1 cut(s) 1860
Fsp4HI GCNGC 3 cut(s) 875, 1887, 1926
FspI TGCGCA 1 cut(s) 1622
GlaI GCGC 2 cut(s) 1570, 1622
GluI GCNGC 3 cut(s) 875, 1887, 1926
GsaI CCCAGC 2 cut(s) 1510, 1689
GsuI CTGGAG 1 cut(s) 1452
HaeIII GGCC 7 cut(s) 718, 943, 970, 1389, 1454, 1560, 1999
HapII CCGG 3 cut(s) 433, 1386, 1554
HgaI GACGC 1 cut(s) 1892
HhaI GCGC 2 cut(s) 1571, 1623
Hin6I GCGC 2 cut(s) 1569, 1621
HinP1I GCGC 2 cut(s) 1569, 1621
HincII GTYRAC 3 cut(s) 1078, 1089, 1372
HindII GTYRAC 3 cut(s) 1078, 1089, 1372
HinfI GANTC 9 cut(s) 391, 497, 556, 1019, 1238, 1272, 1373, 1726, 1952
HpaII CCGG 3 cut(s) 433, 1386, 1554
HphI GGTGA 4 cut(s) 29, 944, 1573, 1892
Hpy166II GTNNAC 5 cut(s) 28, 139, 1078, 1089, 1372
Hpy188I TCNGA 5 cut(s) 606, 871, 958, 1742, 2085
Hpy8I GTNNAC 5 cut(s) 28, 139, 1078, 1089, 1372
Hpy99I CGWCG 4 cut(s) 1093, 1325, 1373, 1977
HpyAV CCTTC 3 cut(s) 381, 923, 1304
HpyCH4III ACNGT 5 cut(s) 44, 1082, 1369, 1947, 2022
HpyCH4IV ACGT 3 cut(s) 643, 1246, 1535
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 524, 581, 1274, 1451, 1566, 1892, 1934
HpyF3I CTNAG 9 cut(s) 571, 797, 870, 1360, 1707, 1739, 1989, 2084, 2112
HpySE526I ACGT 3 cut(s) 643, 1246, 1535
HspAI GCGC 2 cut(s) 1569, 1621
Kzo9I GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
LmnI GCTCC 2 cut(s) 818, 1855
Lsp1109I GCAGC 3 cut(s) 886, 1873, 1937
LweI GCATC 9 cut(s) 64, 172, 1509, 1767, 1789, 1792, 1900, 1924, 2065
MaeII ACGT 3 cut(s) 643, 1246, 1535
MaeIII GTNAC 6 cut(s) 163, 626, 837, 1694, 1880, 1953
MalI GATC 8 cut(s) 96, 177, 888, 1104, 1429, 1614, 1670, 1980
MboI GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
MboII GAAGA 7 cut(s) 119, 343, 698, 761, 1247, 1271, 1505
MflI RGATCY 3 cut(s) 1427, 1612, 1668
MhlI GDGCHC 3 cut(s) 1513, 1860, 1945
MlyI GAGTC 3 cut(s) 1367, 1720, 1961
MmeI TCCRAC 1 cut(s) 715
Mph1103I ATGCAT 3 cut(s) 79, 1502, 1782
MroXI GAANNNNTTC 1 cut(s) 395
MseI TTAA 5 cut(s) 441, 1289, 1343, 1539, 1650
MslI CAYNNNNRTG 1 cut(s) 1554
MspA1I CMGCKG 1 cut(s) 1506
MspI CCGG 3 cut(s) 433, 1386, 1554
MspR9I CCNGG 3 cut(s) 434, 967, 988
Mva1269I GAATGC 4 cut(s) 193, 1043, 1309, 1502
MvaI CCWGG 2 cut(s) 967, 988
MvnI CGCG 2 cut(s) 1569, 1724
MwoI GCNNNNNNNGC 8 cut(s) 83, 524, 581, 1274, 1451, 1566, 1892, 1934
NciI CCSGG 1 cut(s) 434
NdeI CATATG 5 cut(s) 765, 1051, 1528, 1765, 1851
NdeII GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
NlaIV GGNNCC 5 cut(s) 231, 1030, 1126, 1390, 1561
NmeAIII GCCGAG 1 cut(s) 679
NmuCI GTSAC 3 cut(s) 1694, 1880, 1953
NsbI TGCGCA 1 cut(s) 1622
NsiI ATGCAT 3 cut(s) 79, 1502, 1782
NspI RCATGY 2 cut(s) 623, 1899
OliI CACNNNNGTG 1 cut(s) 1554
PaeI GCATGC 1 cut(s) 623
PagI TCATGA 2 cut(s) 559, 1105
PcsI WCGNNNNNNNCGW 1 cut(s) 1978
PctI GAATGC 4 cut(s) 193, 1043, 1309, 1502
PdmI GAANNNNTTC 1 cut(s) 395
PfeI GAWTC 6 cut(s) 391, 497, 556, 1019, 1238, 1272
PinAI ACCGGT 1 cut(s) 1553
PkrI GCNGC 3 cut(s) 876, 1888, 1927
PleI GAGTC 3 cut(s) 1367, 1720, 1960
PpsI GAGTC 3 cut(s) 1367, 1720, 1960
PpuMI RGGWCCY 1 cut(s) 1125
PsiI TTATAA 1 cut(s) 674
Psp124BI GAGCTC 1 cut(s) 1860
Psp1406I AACGTT 1 cut(s) 1535
Psp5II RGGWCCY 1 cut(s) 1125
Psp6I CCWGG 2 cut(s) 965, 986
PspFI CCCAGC 2 cut(s) 1506, 1685
PspGI CCWGG 2 cut(s) 965, 986
PspN4I GGNNCC 5 cut(s) 231, 1030, 1126, 1390, 1561
PspPI GGNCC 6 cut(s) 230, 737, 1029, 1125, 1388, 1559
PspPPI RGGWCCY 1 cut(s) 1125
PstI CTGCAG 3 cut(s) 88, 586, 1909
PsuI RGATCY 3 cut(s) 1427, 1612, 1668
PvuII CAGCTG 1 cut(s) 1506
RsaI GTAC 1 cut(s) 650
RsaNI GTAC 1 cut(s) 649
RseI CAYNNNNRTG 1 cut(s) 1554
SacI GAGCTC 1 cut(s) 1860
SalI GTCGAC 2 cut(s) 1087, 1370
SaqAI TTAA 5 cut(s) 441, 1289, 1343, 1539, 1650
SatI GCNGC 3 cut(s) 875, 1887, 1926
Sau3AI GATC 8 cut(s) 94, 175, 886, 1102, 1427, 1612, 1668, 1978
Sau96I GGNCC 6 cut(s) 230, 737, 1029, 1125, 1388, 1559
SchI GAGTC 3 cut(s) 1367, 1720, 1961
ScrFI CCNGG 3 cut(s) 434, 967, 988
SduI GDGCHC 3 cut(s) 1513, 1860, 1945
SfaNI GCATC 9 cut(s) 64, 172, 1509, 1767, 1789, 1792, 1900, 1924, 2065
SfcI CTRYAG 6 cut(s) 84, 261, 582, 729, 1081, 1905
SgrAI CRCCGGYG 1 cut(s) 1553
SinI GGWCC 4 cut(s) 230, 737, 1029, 1125
SmiMI CAYNNNNRTG 1 cut(s) 1554
SmlI CTYRAG 1 cut(s) 198
SmoI CTYRAG 1 cut(s) 198
SphI GCATGC 1 cut(s) 623
SsiI CCGC 2 cut(s) 1563, 1893
SspI AATATT 1 cut(s) 863
SstI GAGCTC 1 cut(s) 1860
StyD4I CCNGG 3 cut(s) 432, 965, 986
StyI CCWWGG 1 cut(s) 1584
TaaI ACNGT 5 cut(s) 44, 1082, 1369, 1947, 2022
TaiI ACGT 3 cut(s) 646, 1249, 1538
TaqI TCGA 7 cut(s) 93, 514, 787, 1088, 1146, 1352, 1371
TfiI GAWTC 6 cut(s) 391, 497, 556, 1019, 1238, 1272
Tru1I TTAA 5 cut(s) 441, 1289, 1343, 1539, 1650
Tru9I TTAA 5 cut(s) 441, 1289, 1343, 1539, 1650
TscAI CASTG 6 cut(s) 49, 511, 805, 1623, 1842, 1882
TseFI GTSAC 3 cut(s) 1694, 1880, 1953
TseI GCWGC 3 cut(s) 874, 1886, 1925
Tsp45I GTSAC 3 cut(s) 1694, 1880, 1953
TspDTI ATGAA 7 cut(s) 254, 873, 1011, 1506, 1589, 1815, 2021
TspGWI ACGGA 1 cut(s) 1106
TspRI CASTG 6 cut(s) 49, 511, 805, 1623, 1842, 1882
VpaK11BI GGWCC 4 cut(s) 230, 737, 1029, 1125
XapI RAATTY 6 cut(s) 89, 362, 535, 587, 607, 1336
XbaI TCTAGA 3 cut(s) 178, 1117, 1241
XceI RCATGY 2 cut(s) 623, 1899
XcmI CCANNNNNNNNNTGG 1 cut(s) 1591
XmiI GTMKAC 3 cut(s) 27, 1088, 1371
XmnI GAANNNNTTC 1 cut(s) 395
Zsp2I ATGCAT 3 cut(s) 79, 1502, 1782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.