Rh5BG420000

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0016455
Physical Location & Seq
Reverse (-)
67974068 .. 67986164
12097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG420000.1

Sequence Viewer

Length: 2238 bp
ATGGACAAGGTGAAAATAGAAGAGGTTCAGTCACCTACCAAGAAGCAACTGAAGTTGGATCCCACTGTTTATGACGCATTGGTTAAGGAAAAGGTTGCTGTTGGTGATATTGTATACATTGAAGCAAACAGTGGGGCAGTAAAAAGGGTAGGCAGAGTTGATGCATTTACTGCAGAATTCGATCTTGAAGCAGAAGAGTATGTTCCACTTCCAAAAAGAGAGGTTCACAAAGAGGAGATTGTGCAGGATGTAACTCTGCACGATCTAGATGTGAATGCACGACCTGAGGGTGGGCTAGACATATTATCTCTAATGGGTCCAATGATGAAGCCAAGAAAAACAGAAACTGCAGACAAATTGCGACAAAAAATAAACAAGGTCATGCAGGAACAAGATACTGGTGTAGCTCTGCATTTGAAGAGGCTTGTAAAAGAAACTTTTTTCCTTGAATTTTTCAAGAACCTTTGGGCAGGAAGAAATCCATCCCATTCCTTGAATGTAGATAGACTAGCATTTTTCCGGGTGTTTAAAGACTGCTTTCTTTGGGCATTGCATAGTGTTTCAAGATGTTGCAGTGGAGTGGATTCTATCAGTGATTTTCGAGCAACTATTGTTAAAAACGTTCTGGTAAAGCTTTTGTGGCAAGAGTACATTTTCTCTAGTAGCTCACGAAATAAGAAGCAAACATCCCTGGGATTATCAGCAGATTCATATGAAATTGATTTAGCTTCCAACAAGAAGACAGTTGAAACATTGAAAATTACGTACCCAATGAGCTACTTTAGAGAGTTGGTAAACTGCATTGTTGGGGTTCTTTCAGGCATTTATTTGCTGAAGCATGATTTGCTCTCAGCTTTGTCTGCAGAATTTCAGGAGAATTGTCAGAATTTCTTTCAGCATGCTAGTAACATGGAAAGAGAAAGTGAGTATGCTGAGCTAGTTATTCAGTTTATAACATTACTTGAAGAACAAGCAATGCAGAATGGTGGAAGTTGGCCTTTGGCTTCTGTAGTTGGACCAATGGGGGAAGATACATTCCTGCATATGTTCAAAGGAAGTTTTGTTCGATGGTGTCTCAGTGGGAGTAGTTGCTCCGTAAATGCTTGTCTTGACCTGTTACTCGCATTGCTTGACGATGAATATTTCTCTGAGCAGCGAGATAGTGTTATCAGATATGATACTAACCTGGAGCATTCTGGATGTGCACCCTGCTCTTTAGATTCTGACCGGATATTATATTCCATCATATTGATATCTTTGAGCTGCTTATGGAAGCTTGAAGTTCTGGACTGTCACTCTCAGGATCCCTATGAGAAACAAAATCTGCTAGACCAACTTCTTTGCGAAGGTGATGGATGGCCTTTGCCAGTTCCGGATTTTGCCAGGCCAGAGGGATTAGTTGCCAGGGACATCTCTGCTGACCATGATTTATTTGATTCATGTGGAACCACCAACTTCGCATTCACAAATGGAACAAGCGTATTTGCTATTGTTGACTGTAGGTCGACGGATGAGAAAGATCATGACATTACTCTAGACGGGGCCTACAAGTATTTGAACTTCGATAGCATTTTGCCCAATATAGTTGGGACAAAATCTGGCAATGATTGGGCGTGTAGACAGATGGAGAAAGCGATCTATAAGCTGGTTAAAGAATCTGGACATATATCCATTGAAGAACTAGCAAGATTCGCCTTTGACTTTTTAAAGACAAAGGCGACTGAAGGCATTGACGACGAGACAAAGGAAAAATTTTTAAGAGCGTCAACTATCTTAGCCACCGTTGACTCACAGGGTCCAAAGATAGTTCTTGTCAATGCTAAGAACGCCGGCCCCAAAACATTCCAGCCTGATGAGTGTGCAGTTAGTGGATCTGGAGGTGGATACGCAAGAACGGCCTTTCAATCTAGGAGTGATTACCACAAATTGAGCGATGAAGAATGCATCACCTGGGCACAAATAGTGATGGCATATGCAACATTTAAAGACACTCACACCGGTGGCCCGGCACGAGCCTGCCATATCACCAAGGATGGGGTGGTTCATATTGATAAAGATCCACTGCGCATTTACTTGGAAAATTATGTAGCATTTAAGACACTAGAGGACAGGATCTACATTCAGGAGGCTGGGTATCGTGACACAAAACCTGAGCATTACAGAAACGCGACTATCTTTATTCTCAGACACTCATACAGAAATCTCTCATATGCTGACATGATGCATTACATCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

745

Amino Acids

84.24

Weight (kDa)

5.38

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIP49 PF06068 13 - 131 1.4e-30 TIP49 P-loop domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
Acc16I TGCGCA 1 cut(s) 2066
AccI GTMKAC 3 cut(s) 114, 1505, 1618
AccII CGCG 1 cut(s) 2168
AccIII TCCGGA 1 cut(s) 1372
AclI AACGTT 1 cut(s) 621
AclWI GGATC 7 cut(s) 53, 66, 1298, 1311, 1879, 2051, 2120
AcsI RAATTY 5 cut(s) 176, 449, 866, 886, 1751
AcuI CTGAAG 3 cut(s) 71, 854, 1743
AfaI GTAC 2 cut(s) 650, 767
AfiI CCNNNNNNNGG 2 cut(s) 290, 2034
AgeI ACCGGT 1 cut(s) 1997
AhdI GACNNNNNGTC 1 cut(s) 1501
AjnI CCWGG 5 cut(s) 690, 1185, 1382, 1403, 1949
AjuI GAANNNNNNNTTGG 2 cut(s) 1445, 1477
AleI CACNNNNGTG 1 cut(s) 1998
AloI GAACNNNNNNTCC 2 cut(s) 1047, 1079
Alw21I GWGCWC 1 cut(s) 1207
Alw26I GTCTC 2 cut(s) 1079, 1733
Alw44I GTGCAC 1 cut(s) 1203
AlwI GGATC 7 cut(s) 53, 66, 1298, 1311, 1879, 2051, 2120
AlwNI CAGNNNCTG 1 cut(s) 347
Aor13HI TCCGGA 1 cut(s) 1372
AoxI GGCC 7 cut(s) 995, 1358, 1385, 1542, 1831, 1896, 2002
ApaLI GTGCAC 1 cut(s) 1203
ApeKI GCWGC 2 cut(s) 1153, 1263
ApoI RAATTY 5 cut(s) 176, 449, 866, 886, 1751
AsiGI ACCGGT 1 cut(s) 1997
Asp700I GAANNNNTTC 1 cut(s) 24
AspLEI GCGC 1 cut(s) 2067
AspS9I GGNCC 6 cut(s) 317, 1016, 1542, 1796, 1832, 2003
AsuC2I CCSGG 2 cut(s) 521, 2006
AsuHPI GGTGA 6 cut(s) 22, 24, 116, 1361, 1939, 2017
AvaII GGWCC 3 cut(s) 317, 1016, 1796
AxyI CCTNAGG 1 cut(s) 285
BaeGI GKGCMC 2 cut(s) 1207, 1957
BaeI ACNNNNGTAYC 2 cut(s) 387, 420
BamHI GGATCC 2 cut(s) 58, 1303
BarI GAAGNNNNNNTAC 2 cut(s) 1544, 1576
BauI CACGAG 1 cut(s) 2010
BbsI GAAGAC 1 cut(s) 746
Bbv12I GWGCWC 1 cut(s) 1207
BbvI GCAGC 2 cut(s) 1165, 1250
BccI CCATC 8 cut(s) 490, 1062, 1250, 1346, 1350, 1618, 1960, 2027
BceAI ACGGC 1 cut(s) 1911
BciT130I CCWGG 5 cut(s) 692, 1187, 1384, 1405, 1951
BciVI GTATCC 1 cut(s) 1877
BcnI CCSGG 2 cut(s) 521, 2006
BcoDI GTCTC 2 cut(s) 1079, 1733
BfmI CTRYAG 5 cut(s) 171, 348, 861, 1008, 1498
BfuI GTATCC 1 cut(s) 1877
BisI GCNGC 2 cut(s) 1154, 1264
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 2 cut(s) 1155, 1265
Bme1390I CCNGG 7 cut(s) 521, 692, 1187, 1384, 1405, 1951, 2006
Bme18I GGWCC 3 cut(s) 317, 1016, 1796
BmeRI GACNNNNNGTC 1 cut(s) 1501
BmgT120I GGNCC 6 cut(s) 317, 1016, 1542, 1796, 1832, 2003
BmiI GGNNCC 7 cut(s) 60, 318, 1305, 1447, 1543, 1797, 1834
BmrFI CCNGG 7 cut(s) 521, 692, 1187, 1384, 1405, 1951, 2006
BmsI GCATC 3 cut(s) 151, 1953, 2211
BpiI GAAGAC 1 cut(s) 746
BpmI CTGGAG 2 cut(s) 1208, 1896
Bpu10I CCTNAGC 1 cut(s) 2151
Bpu1102I GCTNAGC 1 cut(s) 933
BpuMI CCSGG 2 cut(s) 521, 2006
BsaAI YACGTR 1 cut(s) 765
BsaBI GATNNNNATC 1 cut(s) 2055
BsaJI CCNNGG 5 cut(s) 690, 691, 1404, 1950, 2028
BsaWI WCCGGW 3 cut(s) 1227, 1372, 1997
BsaXI ACNNNNNCTCC 2 cut(s) 2117, 2147
Bsc4I CCNNNNNNNGG 2 cut(s) 290, 2034
Bse118I RCCGGY 2 cut(s) 1829, 1997
Bse1I ACTGG 2 cut(s) 403, 1367
Bse21I CCTNAGG 1 cut(s) 285
Bse3DI GCAATG 4 cut(s) 548, 981, 1124, 1609
Bse8I GATNNNNATC 1 cut(s) 2055
BseAI TCCGGA 1 cut(s) 1372
BseBI CCWGG 5 cut(s) 692, 1187, 1384, 1405, 1951
BseDI CCNNGG 5 cut(s) 690, 691, 1404, 1950, 2028
BseGI GGATG 7 cut(s) 253, 482, 686, 1205, 1361, 1516, 2038
BseJI GATNNNNATC 1 cut(s) 2055
BseLI CCNNNNNNNGG 2 cut(s) 290, 2034
BseMI GCAATG 4 cut(s) 548, 981, 1124, 1609
BseMII CTCAG 8 cut(s) 276, 864, 924, 1090, 1140, 1313, 2142, 2197
BseNI ACTGG 2 cut(s) 403, 1367
BseRI GAGGAG 1 cut(s) 248
BseSI GKGCMC 2 cut(s) 1207, 1957
BseXI GCAGC 2 cut(s) 1165, 1250
BseYI CCCAGC 1 cut(s) 2129
BsgI GTGCAG 3 cut(s) 242, 263, 1881
Bsh1236I CGCG 1 cut(s) 2168
BshFI GGCC 7 cut(s) 997, 1360, 1387, 1544, 1833, 1898, 2004
BshTI ACCGGT 1 cut(s) 1997
BsiHKAI GWGCWC 1 cut(s) 1207
BsiSI CCGG 6 cut(s) 520, 1228, 1373, 1830, 1998, 2006
BslFI GGGAC 2 cut(s) 1421, 1603
BslI CCNNNNNNNGG 2 cut(s) 290, 2034
BsmAI GTCTC 2 cut(s) 1079, 1733
BsmFI GGGAC 2 cut(s) 1421, 1603
BsmI GAATGC 4 cut(s) 280, 1192, 1460, 1946
BsnI GGCC 7 cut(s) 997, 1360, 1387, 1544, 1833, 1898, 2004
Bsp1286I GDGCHC 2 cut(s) 1207, 1957
Bsp13I TCCGGA 1 cut(s) 1372
Bsp143I GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
Bsp1720I GCTNAGC 1 cut(s) 933
BspANI GGCC 7 cut(s) 997, 1360, 1387, 1544, 1833, 1898, 2004
BspCNI CTCAG 8 cut(s) 277, 863, 925, 1089, 1141, 1312, 2143, 2196
BspEI TCCGGA 1 cut(s) 1372
BspFNI CGCG 1 cut(s) 2168
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 7 cut(s) 60, 318, 1305, 1447, 1543, 1797, 1834
BspMAI CTGCAG 3 cut(s) 175, 352, 865
BspPI GGATC 7 cut(s) 53, 66, 1298, 1311, 1879, 2051, 2120
BsrDI GCAATG 4 cut(s) 548, 981, 1124, 1609
BsrFI RCCGGY 2 cut(s) 1829, 1997
BsrI ACTGG 2 cut(s) 403, 1367
BssAI RCCGGY 2 cut(s) 1829, 1997
BssECI CCNNGG 5 cut(s) 690, 691, 1404, 1950, 2028
BssMI GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
BssNAI GTATAC 1 cut(s) 115
BssSI CACGAG 1 cut(s) 2010
BssT1I CCWWGG 1 cut(s) 2028
Bst1107I GTATAC 1 cut(s) 115
Bst2BI CACGAG 1 cut(s) 2010
Bst2UI CCWGG 5 cut(s) 692, 1187, 1384, 1405, 1951
Bst4CI ACNGT 6 cut(s) 67, 131, 745, 1292, 1499, 1783
Bst6I CTCTTC 3 cut(s) 15, 189, 413
BstAPI GCANNNNNTGC 2 cut(s) 170, 844
BstBAI YACGTR 1 cut(s) 765
BstC8I GCNNGC 3 cut(s) 900, 1831, 2017
BstF5I GGATG 7 cut(s) 253, 482, 686, 1205, 1361, 1516, 2038
BstFNI CGCG 1 cut(s) 2168
BstHHI GCGC 1 cut(s) 2067
BstKTI GATC 9 cut(s) 61, 184, 265, 1306, 1522, 1638, 1874, 2059, 2115
BstMAI GTCTC 2 cut(s) 1079, 1733
BstMBI GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
BstMWI GCNNNNNNNGC 7 cut(s) 170, 640, 844, 860, 1691, 1826, 1895
BstNI CCWGG 5 cut(s) 692, 1187, 1384, 1405, 1951
BstNSI RCATGY 1 cut(s) 902
BstSCI CCNGG 7 cut(s) 519, 690, 1185, 1382, 1403, 1949, 2004
BstSFI CTRYAG 5 cut(s) 171, 348, 861, 1008, 1498
BstSLI GKGCMC 2 cut(s) 1207, 1957
BstSNI TACGTA 1 cut(s) 765
BstUI CGCG 1 cut(s) 2168
BstV1I GCAGC 2 cut(s) 1165, 1250
BstV2I GAAGAC 1 cut(s) 746
BstX2I RGATCY 5 cut(s) 58, 1303, 1871, 2056, 2112
BstYI RGATCY 5 cut(s) 58, 1303, 1871, 2056, 2112
BstZ17I GTATAC 1 cut(s) 115
Bsu36I CCTNAGG 1 cut(s) 285
BsuI GTATCC 1 cut(s) 1877
BsuRI GGCC 7 cut(s) 997, 1360, 1387, 1544, 1833, 1898, 2004
BtgZI GCGATG 1 cut(s) 1947
BtsCI GGATG 7 cut(s) 253, 482, 686, 1205, 1361, 1516, 2038
BtsI GCAGTG 2 cut(s) 580, 2060
BtsIMutI CAGTG 6 cut(s) 63, 136, 580, 598, 1084, 2060
Cac8I GCNNGC 3 cut(s) 900, 1831, 2017
CaiI CAGNNNCTG 1 cut(s) 347
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 1 cut(s) 2067
Cfr10I RCCGGY 2 cut(s) 1829, 1997
Cfr13I GGNCC 6 cut(s) 317, 1016, 1542, 1796, 1832, 2003
CseI GACGC 2 cut(s) 83, 1752
Csp6I GTAC 2 cut(s) 649, 766
CspAI ACCGGT 1 cut(s) 1997
CviAII CATG 8 cut(s) 382, 839, 899, 910, 1424, 1440, 1523, 2218
CviQI GTAC 2 cut(s) 649, 766
DpnI GATC 9 cut(s) 60, 183, 264, 1305, 1521, 1637, 1873, 2058, 2114
DpnII GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
DraI TTTAAA 3 cut(s) 529, 1707, 1984
DriI GACNNNNNGTC 1 cut(s) 1501
Eam1104I CTCTTC 3 cut(s) 15, 189, 413
Eam1105I GACNNNNNGTC 1 cut(s) 1501
EarI CTCTTC 3 cut(s) 15, 189, 413
Eco105I TACGTA 1 cut(s) 765
Eco130I CCWWGG 1 cut(s) 2028
Eco32I GATATC 1 cut(s) 1254
Eco47I GGWCC 3 cut(s) 317, 1016, 1796
Eco57I CTGAAG 3 cut(s) 71, 854, 1743
Eco81I CCTNAGG 1 cut(s) 285
EcoO109I RGGNCCY 1 cut(s) 1542
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 5 cut(s) 690, 1185, 1382, 1403, 1949
EcoRV GATATC 1 cut(s) 1254
EcoT14I CCWWGG 1 cut(s) 2028
EcoT22I ATGCAT 3 cut(s) 166, 1946, 2226
ErhI CCWWGG 1 cut(s) 2028
FaeI CATG 8 cut(s) 385, 842, 902, 913, 1427, 1443, 1526, 2221
FalI AAGNNNNNCTT 2 cut(s) 982, 1014
FaqI GGGAC 2 cut(s) 1421, 1603
FatI CATG 8 cut(s) 381, 838, 898, 909, 1423, 1439, 1522, 2217
FauNDI CATATG 4 cut(s) 712, 1044, 1972, 2209
FblI GTMKAC 3 cut(s) 114, 1505, 1618
Fnu4HI GCNGC 2 cut(s) 1154, 1264
FokI GGATG 7 cut(s) 260, 469, 673, 1212, 1368, 1523, 2045
Fsp4HI GCNGC 2 cut(s) 1154, 1264
FspI TGCGCA 1 cut(s) 2066
GlaI GCGC 1 cut(s) 2066
GluI GCNGC 2 cut(s) 1154, 1264
GsaI CCCAGC 1 cut(s) 2133
GsuI CTGGAG 2 cut(s) 1208, 1896
HaeIII GGCC 7 cut(s) 997, 1360, 1387, 1544, 1833, 1898, 2004
HapII CCGG 6 cut(s) 520, 1228, 1373, 1830, 1998, 2006
HgaI GACGC 2 cut(s) 83, 1752
HhaI GCGC 1 cut(s) 2067
Hin1II CATG 8 cut(s) 385, 842, 902, 913, 1427, 1443, 1526, 2221
Hin6I GCGC 1 cut(s) 2065
HinP1I GCGC 1 cut(s) 2065
HincII GTYRAC 4 cut(s) 1495, 1506, 1767, 1786
HindII GTYRAC 4 cut(s) 1495, 1506, 1767, 1786
HindIII AAGCTT 2 cut(s) 632, 1274
HinfI GANTC 7 cut(s) 584, 707, 1220, 1436, 1655, 1689, 1787
HpaII CCGG 6 cut(s) 520, 1228, 1373, 1830, 1998, 2006
HphI GGTGA 6 cut(s) 22, 24, 116, 1361, 1939, 2017
Hpy166II GTNNAC 9 cut(s) 115, 226, 796, 1205, 1495, 1506, 1619, 1767, 1786
Hpy188I TCNGA 5 cut(s) 885, 1150, 1172, 1225, 2186
Hpy8I GTNNAC 9 cut(s) 115, 226, 796, 1205, 1495, 1506, 1619, 1767, 1786
Hpy99I CGWCG 2 cut(s) 1510, 1739
HpyAV CCTTC 2 cut(s) 1340, 1718
HpyCH4III ACNGT 6 cut(s) 67, 131, 745, 1292, 1499, 1783
HpyCH4IV ACGT 2 cut(s) 621, 764
HpyF10VI GCNNNNNNNGC 7 cut(s) 170, 640, 844, 860, 1691, 1826, 1895
HpySE526I ACGT 2 cut(s) 621, 764
Hsp92II CATG 8 cut(s) 385, 842, 902, 913, 1427, 1443, 1526, 2221
HspAI GCGC 1 cut(s) 2065
Kpn2I TCCGGA 1 cut(s) 1372
KroI GCCGGC 1 cut(s) 1829
KroNI GCCGGC 1 cut(s) 1831
Kzo9I GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
LmnI GCTCC 2 cut(s) 1097, 1189
Lsp1109I GCAGC 2 cut(s) 1165, 1250
LweI GCATC 3 cut(s) 151, 1953, 2211
MaeII ACGT 2 cut(s) 621, 764
MaeIII GTNAC 6 cut(s) 30, 250, 905, 1116, 1292, 2138
MalI GATC 9 cut(s) 60, 183, 264, 1305, 1521, 1637, 1873, 2058, 2114
MboI GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
MboII GAAGA 9 cut(s) 32, 206, 430, 486, 751, 977, 1040, 1688, 1949
MflI RGATCY 5 cut(s) 58, 1303, 1871, 2056, 2112
MhlI GDGCHC 2 cut(s) 1207, 1957
MlyI GAGTC 1 cut(s) 1781
MmeI TCCRAC 3 cut(s) 36, 756, 994
MnlI CCTC 9 cut(s) 16, 214, 226, 280, 414, 1384, 1871, 2098, 2119
Mph1103I ATGCAT 3 cut(s) 166, 1946, 2226
MroI TCCGGA 1 cut(s) 1372
MroNI GCCGGC 1 cut(s) 1829
MroXI GAANNNNTTC 1 cut(s) 24
MseI TTAA 8 cut(s) 84, 528, 615, 1650, 1706, 1757, 1983, 2094
MslI CAYNNNNRTG 1 cut(s) 1998
MspI CCGG 6 cut(s) 520, 1228, 1373, 1830, 1998, 2006
MspR9I CCNGG 7 cut(s) 521, 692, 1187, 1384, 1405, 1951, 2006
Mva1269I GAATGC 4 cut(s) 280, 1192, 1460, 1946
MvaI CCWGG 5 cut(s) 692, 1187, 1384, 1405, 1951
MvnI CGCG 1 cut(s) 2168
MwoI GCNNNNNNNGC 7 cut(s) 170, 640, 844, 860, 1691, 1826, 1895
NaeI GCCGGC 1 cut(s) 1831
NciI CCSGG 2 cut(s) 521, 2006
NdeI CATATG 4 cut(s) 712, 1044, 1972, 2209
NdeII GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
NgoMIV GCCGGC 1 cut(s) 1829
NlaIII CATG 8 cut(s) 385, 842, 902, 913, 1427, 1443, 1526, 2221
NlaIV GGNNCC 7 cut(s) 60, 318, 1305, 1447, 1543, 1797, 1834
NmuCI GTSAC 3 cut(s) 30, 1292, 2138
NsbI TGCGCA 1 cut(s) 2066
NsiI ATGCAT 3 cut(s) 166, 1946, 2226
NspI RCATGY 1 cut(s) 902
OliI CACNNNNGTG 1 cut(s) 1998
PaeI GCATGC 1 cut(s) 902
PagI TCATGA 1 cut(s) 1522
PasI CCCWGGG 1 cut(s) 691
PctI GAATGC 4 cut(s) 280, 1192, 1460, 1946
PdiI GCCGGC 1 cut(s) 1831
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 6 cut(s) 584, 707, 1220, 1436, 1655, 1689
PinAI ACCGGT 1 cut(s) 1997
PkrI GCNGC 2 cut(s) 1155, 1265
PleI GAGTC 1 cut(s) 1781
PpsI GAGTC 1 cut(s) 1781
Ppu21I YACGTR 1 cut(s) 765
PsiI TTATAA 1 cut(s) 953
Psp1406I AACGTT 1 cut(s) 621
Psp6I CCWGG 5 cut(s) 690, 1185, 1382, 1403, 1949
PspFI CCCAGC 1 cut(s) 2129
PspGI CCWGG 5 cut(s) 690, 1185, 1382, 1403, 1949
PspN4I GGNNCC 7 cut(s) 60, 318, 1305, 1447, 1543, 1797, 1834
PspPI GGNCC 6 cut(s) 317, 1016, 1542, 1796, 1832, 2003
PstI CTGCAG 3 cut(s) 175, 352, 865
PstNI CAGNNNCTG 1 cut(s) 347
PsuI RGATCY 5 cut(s) 58, 1303, 1871, 2056, 2112
RsaI GTAC 2 cut(s) 650, 767
RsaNI GTAC 2 cut(s) 649, 766
RseI CAYNNNNRTG 1 cut(s) 1998
SalI GTCGAC 1 cut(s) 1504
SaqAI TTAA 8 cut(s) 84, 528, 615, 1650, 1706, 1757, 1983, 2094
SatI GCNGC 2 cut(s) 1154, 1264
Sau3AI GATC 9 cut(s) 58, 181, 262, 1303, 1519, 1635, 1871, 2056, 2112
Sau96I GGNCC 6 cut(s) 317, 1016, 1542, 1796, 1832, 2003
SchI GAGTC 1 cut(s) 1781
ScrFI CCNGG 7 cut(s) 521, 692, 1187, 1384, 1405, 1951, 2006
SduI GDGCHC 2 cut(s) 1207, 1957
SfaNI GCATC 3 cut(s) 151, 1953, 2211
SfcI CTRYAG 5 cut(s) 171, 348, 861, 1008, 1498
SgrAI CRCCGGYG 1 cut(s) 1997
SinI GGWCC 3 cut(s) 317, 1016, 1796
SmiMI CAYNNNNRTG 1 cut(s) 1998
SnaBI TACGTA 1 cut(s) 765
SphI GCATGC 1 cut(s) 902
SspI AATATT 1 cut(s) 1142
StyD4I CCNGG 7 cut(s) 519, 690, 1185, 1382, 1403, 1949, 2004
StyI CCWWGG 1 cut(s) 2028
TaaI ACNGT 6 cut(s) 67, 131, 745, 1292, 1499, 1783
TaiI ACGT 2 cut(s) 624, 767
TaqI TCGA 5 cut(s) 180, 601, 1066, 1505, 1563
TatI WGTACW 1 cut(s) 648
TfiI GAWTC 6 cut(s) 584, 707, 1220, 1436, 1655, 1689
Tru1I TTAA 8 cut(s) 84, 528, 615, 1650, 1706, 1757, 1983, 2094
Tru9I TTAA 8 cut(s) 84, 528, 615, 1650, 1706, 1757, 1983, 2094
TscAI CASTG 6 cut(s) 70, 136, 580, 598, 1084, 2067
TseFI GTSAC 3 cut(s) 30, 1292, 2138
TseI GCWGC 2 cut(s) 1153, 1263
Tsp45I GTSAC 3 cut(s) 30, 1292, 2138
TspDTI ATGAA 7 cut(s) 341, 699, 729, 1152, 1428, 1950, 2033
TspGWI ACGGA 2 cut(s) 1084, 1523
TspRI CASTG 6 cut(s) 70, 136, 580, 598, 1084, 2067
VneI GTGCAC 1 cut(s) 1203
VpaK11BI GGWCC 3 cut(s) 317, 1016, 1796
XapI RAATTY 5 cut(s) 176, 449, 866, 886, 1751
XbaI TCTAGA 2 cut(s) 265, 1534
XceI RCATGY 1 cut(s) 902
XcmI CCANNNNNNNNNTGG 1 cut(s) 2035
XmiI GTMKAC 3 cut(s) 114, 1505, 1618
XmnI GAANNNNTTC 1 cut(s) 24
Zsp2I ATGCAT 3 cut(s) 166, 1946, 2226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.