Proline-rich nuclear receptor coactivator motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02715 AT4G02715 |
| fragaria_vesca | FvH4_2g23281 |
| malus_domestica | MD03G1262100.v1.1 MD11G1282800.v1.1 |
| prunus_persica | Prupe.8G238400_v2.0.a1 |
| pyrus_communis | pycom03g20990 pycom11g25050 |
| rosa_chinensis | RchiOBHm_Chr6g0290651 |
| rosa_laevigata | RLG00000012187 |
| rosa_multiflora | Rmu_co8113914.1_g000001 Rmu_sc0006791.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00176830 |
| rosa_rugosa | Rorug06G0214000 |
| rosa_samantha | Rh6AG324500 Rh6BG332100 Rh6CG337800 Rh6DG325200 |
| rosa_wichuraiana | Rw6G028170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 215 |
| AcsI | RAATTY | 1 cut(s) | 203 |
| AcuI | CTGAAG | 1 cut(s) | 122 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 385 |
| AgsI | TTSAA | 2 cut(s) | 239, 266 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 369 |
| AjnI | CCWGG | 2 cut(s) | 281, 384 |
| AluBI | AGCT | 3 cut(s) | 47, 249, 318 |
| AluI | AGCT | 3 cut(s) | 47, 249, 318 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 257 |
| AoxI | GGCC | 1 cut(s) | 215 |
| ApoI | RAATTY | 1 cut(s) | 203 |
| AspS9I | GGNCC | 2 cut(s) | 155, 225 |
| AsuHPI | GGTGA | 1 cut(s) | 13 |
| AvaII | GGWCC | 2 cut(s) | 155, 225 |
| BciT130I | CCWGG | 2 cut(s) | 283, 386 |
| BfaI | CTAG | 3 cut(s) | 183, 246, 360 |
| BglII | AGATCT | 1 cut(s) | 331 |
| Bme1390I | CCNGG | 2 cut(s) | 283, 386 |
| Bme18I | GGWCC | 2 cut(s) | 155, 225 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 369 |
| BmgT120I | GGNCC | 2 cut(s) | 155, 225 |
| BmrFI | CCNGG | 2 cut(s) | 283, 386 |
| BmsI | GCATC | 1 cut(s) | 384 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 302, 334 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 385 |
| Bse3DI | GCAATG | 1 cut(s) | 67 |
| BseBI | CCWGG | 2 cut(s) | 283, 386 |
| BseGI | GGATG | 2 cut(s) | 375, 394 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 385 |
| BseMI | GCAATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 2 cut(s) | 264, 366 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| BshFI | GGCC | 1 cut(s) | 217 |
| BslFI | GGGAC | 1 cut(s) | 283 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 385 |
| BsmFI | GGGAC | 1 cut(s) | 283 |
| BsnI | GGCC | 1 cut(s) | 217 |
| Bsp143I | GATC | 1 cut(s) | 331 |
| BspANI | GGCC | 1 cut(s) | 217 |
| BspCNI | CTCAG | 2 cut(s) | 263, 365 |
| BspQI | GCTCTTC | 1 cut(s) | 325 |
| BsrDI | GCAATG | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 331 |
| Bst2UI | CCWGG | 2 cut(s) | 283, 386 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| Bst6I | CTCTTC | 1 cut(s) | 325 |
| BstDEI | CTNAG | 2 cut(s) | 250, 352 |
| BstF5I | GGATG | 2 cut(s) | 375, 394 |
| BstKTI | GATC | 1 cut(s) | 334 |
| BstMBI | GATC | 1 cut(s) | 331 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 158, 241, 287, 353 |
| BstNI | CCWGG | 2 cut(s) | 283, 386 |
| BstSCI | CCNGG | 2 cut(s) | 281, 384 |
| BstX2I | RGATCY | 1 cut(s) | 331 |
| BstYI | RGATCY | 1 cut(s) | 331 |
| BsuRI | GGCC | 1 cut(s) | 217 |
| BtsCI | GGATG | 2 cut(s) | 375, 394 |
| CaiI | CAGNNNCTG | 1 cut(s) | 257 |
| Cfr13I | GGNCC | 2 cut(s) | 155, 225 |
| CseI | GACGC | 1 cut(s) | 359 |
| CviJI | RGCY | 7 cut(s) | 47, 115, 152, 217, 249, 318, 356 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 115, 152, 217, 249, 318, 356 |
| DdeI | CTNAG | 2 cut(s) | 250, 352 |
| DpnI | GATC | 1 cut(s) | 333 |
| DpnII | GATC | 1 cut(s) | 331 |
| DriI | GACNNNNNGTC | 1 cut(s) | 369 |
| EaeI | YGGCCR | 1 cut(s) | 215 |
| Eam1104I | CTCTTC | 1 cut(s) | 325 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 369 |
| EarI | CTCTTC | 1 cut(s) | 325 |
| Eco47I | GGWCC | 2 cut(s) | 155, 225 |
| Eco57I | CTGAAG | 1 cut(s) | 122 |
| EcoRII | CCWGG | 2 cut(s) | 281, 384 |
| FaiI | YATR | 2 cut(s) | 42, 315 |
| FaqI | GGGAC | 1 cut(s) | 283 |
| FokI | GGATG | 2 cut(s) | 362, 401 |
| FspBI | CTAG | 3 cut(s) | 183, 246, 360 |
| HaeIII | GGCC | 1 cut(s) | 217 |
| HgaI | GACGC | 1 cut(s) | 359 |
| HincII | GTYRAC | 1 cut(s) | 394 |
| HindII | GTYRAC | 1 cut(s) | 394 |
| HinfI | GANTC | 2 cut(s) | 350, 364 |
| HphI | GGTGA | 1 cut(s) | 13 |
| Hpy166II | GTNNAC | 1 cut(s) | 394 |
| Hpy188I | TCNGA | 1 cut(s) | 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 394 |
| Hpy99I | CGWCG | 2 cut(s) | 375, 401 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 2 cut(s) | 271, 290 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 158, 241, 287, 353 |
| HpyF3I | CTNAG | 2 cut(s) | 250, 352 |
| Kzo9I | GATC | 1 cut(s) | 331 |
| LguI | GCTCTTC | 1 cut(s) | 325 |
| LpnPI | CCDG | 9 cut(s) | 113, 133, 138, 171, 268, 295, 319, 371, 398 |
| LweI | GCATC | 1 cut(s) | 384 |
| MaeI | CTAG | 3 cut(s) | 183, 246, 360 |
| MalI | GATC | 1 cut(s) | 333 |
| MboI | GATC | 1 cut(s) | 331 |
| MboII | GAAGA | 2 cut(s) | 115, 312 |
| MfeI | CAATTG | 1 cut(s) | 276 |
| MflI | RGATCY | 1 cut(s) | 331 |
| MluCI | AATT | 4 cut(s) | 78, 203, 239, 276 |
| MlyI | GAGTC | 2 cut(s) | 344, 358 |
| MnlI | CCTC | 2 cut(s) | 216, 389 |
| MseI | TTAA | 1 cut(s) | 120 |
| MspR9I | CCNGG | 2 cut(s) | 283, 386 |
| MunI | CAATTG | 1 cut(s) | 276 |
| MvaI | CCWGG | 2 cut(s) | 283, 386 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 158, 241, 287, 353 |
| NdeII | GATC | 1 cut(s) | 331 |
| PciSI | GCTCTTC | 1 cut(s) | 325 |
| PflFI | GACNNNGTC | 1 cut(s) | 229 |
| PleI | GAGTC | 2 cut(s) | 344, 358 |
| PpsI | GAGTC | 2 cut(s) | 344, 358 |
| Psp6I | CCWGG | 2 cut(s) | 281, 384 |
| PspGI | CCWGG | 2 cut(s) | 281, 384 |
| PspPI | GGNCC | 2 cut(s) | 155, 225 |
| PstNI | CAGNNNCTG | 1 cut(s) | 257 |
| PsuI | RGATCY | 1 cut(s) | 331 |
| PsyI | GACNNNGTC | 1 cut(s) | 229 |
| SapI | GCTCTTC | 1 cut(s) | 325 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 331 |
| Sau96I | GGNCC | 2 cut(s) | 155, 225 |
| SchI | GAGTC | 2 cut(s) | 344, 358 |
| ScrFI | CCNGG | 2 cut(s) | 283, 386 |
| SetI | ASST | 9 cut(s) | 35, 41, 49, 102, 184, 251, 287, 320, 387 |
| SfaNI | GCATC | 1 cut(s) | 384 |
| SinI | GGWCC | 2 cut(s) | 155, 225 |
| Sse9I | AATT | 4 cut(s) | 78, 203, 239, 276 |
| SspMI | CTAG | 3 cut(s) | 183, 246, 360 |
| StyD4I | CCNGG | 2 cut(s) | 281, 384 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TasI | AATT | 4 cut(s) | 78, 203, 239, 276 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| Tth111I | GACNNNGTC | 1 cut(s) | 229 |
| VpaK11BI | GGWCC | 2 cut(s) | 155, 225 |
| XapI | RAATTY | 1 cut(s) | 203 |
| XspI | CTAG | 3 cut(s) | 183, 246, 360 |