Rmu_co8152086.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8152086.1
Physical Location & Seq
Reverse (-)
2 .. 566
565 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8152086.1_g000001.1.cds

Sequence Viewer

Length: 565 bp
atggccatgtccagaagtggcagtttgaggaggtcatggcgacttaaattggccattgcattgctaatagccttgaccattgctttgtccatttttggggtagttgcagtatttcgagcacgaaagatgaatggagaggacaatgattctgagattggaggggactcatggccttggcaattcactccatttcagaaggtgagtttctcagttgagcaagttctaaaatgtctagtagaaaccaatgtaataggaaagggatgctcaggagttgtttaccgggcagaaatggaaaacgaagacattgcagtaaagaagctctggccaacaacaactgcttccaaatatgattgtcaaagtagaggagttcgtgattccttttcggctgaggtgaagacccttggctccattcgccacaagaacattgttaggttcttgggttgctgttggaaccgaaacacaagattgcttatgtatgagtacatgccaaatgggagcttgggtggtttacttcatgaaagaagtggtaactgcttagaatgggacatcagatatcgcatagtac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

188

Amino Acids

21.29

Weight (kDa)

9.36

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013816)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 3 cut(s) 3, 51, 323
AfaI GTAC 2 cut(s) 482, 564
AfiI CCNNNNNNNGG 1 cut(s) 96
AluBI AGCT 2 cut(s) 319, 498
AluI AGCT 2 cut(s) 319, 498
Alw21I GWGCWC 1 cut(s) 121
AoxI GGCC 4 cut(s) 3, 51, 170, 323
ArsI GACNNNNNNTTYG 2 cut(s) 67, 99
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 2 cut(s) 211, 403
BalI TGGCCA 3 cut(s) 5, 53, 325
BbsI GAAGAC 2 cut(s) 306, 401
Bbv12I GWGCWC 1 cut(s) 121
BbvCI CCTCAGC 1 cut(s) 387
BcgI CGANNNNNNTGC 2 cut(s) 287, 321
BcnI CCSGG 1 cut(s) 281
BfaI CTAG 1 cut(s) 233
Bme1390I CCNGG 1 cut(s) 281
BmiI GGNNCC 2 cut(s) 406, 452
BmrFI CCNGG 1 cut(s) 281
BmsI GCATC 1 cut(s) 251
BpiI GAAGAC 2 cut(s) 306, 401
Bpu10I CCTNAGC 2 cut(s) 265, 387
BpuMI CCSGG 1 cut(s) 281
BsaJI CCNNGG 2 cut(s) 173, 400
BsaXI ACNNNNNCTCC 2 cut(s) 487, 517
Bsc4I CCNNNNNNNGG 1 cut(s) 96
Bse3DI GCAATG 4 cut(s) 54, 59, 78, 303
BseDI CCNNGG 2 cut(s) 173, 400
BseGI GGATG 1 cut(s) 266
BseLI CCNNNNNNNGG 1 cut(s) 96
BseMI GCAATG 4 cut(s) 54, 59, 78, 303
BseMII CTCAG 4 cut(s) 141, 222, 279, 378
BseRI GAGGAG 2 cut(s) 43, 378
BshFI GGCC 4 cut(s) 5, 53, 172, 325
BsiHKAI GWGCWC 1 cut(s) 121
BsiSI CCGG 1 cut(s) 280
BslFI GGGAC 2 cut(s) 176, 557
BslI CCNNNNNNNGG 1 cut(s) 96
BsmFI GGGAC 2 cut(s) 176, 557
BsnI GGCC 4 cut(s) 5, 53, 172, 325
Bsp1286I GDGCHC 1 cut(s) 121
BspANI GGCC 4 cut(s) 5, 53, 172, 325
BspCNI CTCAG 4 cut(s) 142, 221, 278, 379
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 2 cut(s) 406, 452
BsrDI GCAATG 4 cut(s) 54, 59, 78, 303
BssECI CCNNGG 2 cut(s) 173, 400
BssT1I CCWWGG 2 cut(s) 173, 400
BstDEI CTNAG 5 cut(s) 150, 208, 265, 387, 535
BstF5I GGATG 1 cut(s) 266
BstMWI GCNNNNNNNGC 1 cut(s) 411
BstNSI RCATGY 1 cut(s) 487
BstSCI CCNGG 1 cut(s) 279
BstV2I GAAGAC 2 cut(s) 306, 401
BsuRI GGCC 4 cut(s) 5, 53, 172, 325
BtsCI GGATG 1 cut(s) 266
CciI TCATGA 1 cut(s) 514
Csp6I GTAC 2 cut(s) 481, 563
CviAII CATG 5 cut(s) 7, 36, 168, 484, 515
CviJI RGCY 9 cut(s) 5, 53, 71, 172, 319, 325, 386, 405, 498
CviKI_1 RGCY 9 cut(s) 5, 53, 71, 172, 319, 325, 386, 405, 498
CviQI GTAC 2 cut(s) 481, 563
DdeI CTNAG 5 cut(s) 150, 208, 265, 387, 535
EaeI YGGCCR 3 cut(s) 3, 51, 323
Eco130I CCWWGG 2 cut(s) 173, 400
Eco32I GATATC 1 cut(s) 554
EcoRV GATATC 1 cut(s) 554
EcoT14I CCWWGG 2 cut(s) 173, 400
ErhI CCWWGG 2 cut(s) 173, 400
FaeI CATG 5 cut(s) 10, 39, 171, 487, 518
FaiI YATR 9 cut(s) 8, 37, 169, 348, 473, 477, 485, 516, 560
FaqI GGGAC 2 cut(s) 176, 557
FatI CATG 5 cut(s) 6, 35, 167, 483, 514
FokI GGATG 1 cut(s) 273
FspBI CTAG 1 cut(s) 233
HaeIII GGCC 4 cut(s) 5, 53, 172, 325
HapII CCGG 1 cut(s) 280
Hin1II CATG 5 cut(s) 10, 39, 171, 487, 518
HinfI GANTC 3 cut(s) 146, 164, 374
HpaII CCGG 1 cut(s) 280
HphI GGTGA 2 cut(s) 211, 403
Hpy166II GTNNAC 2 cut(s) 277, 509
Hpy188I TCNGA 3 cut(s) 151, 195, 551
Hpy188III TCNNGA 4 cut(s) 12, 267, 371, 515
Hpy8I GTNNAC 2 cut(s) 277, 509
HpyAV CCTTC 1 cut(s) 190
HpyCH4V TGCA 3 cut(s) 59, 107, 308
HpyF10VI GCNNNNNNNGC 1 cut(s) 411
HpyF3I CTNAG 5 cut(s) 150, 208, 265, 387, 535
Hsp92II CATG 5 cut(s) 10, 39, 171, 487, 518
LmnI GCTCC 2 cut(s) 410, 495
LpnPI CCDG 4 cut(s) 25, 252, 293, 307
LweI GCATC 1 cut(s) 251
MaeI CTAG 1 cut(s) 233
MaeIII GTNAC 1 cut(s) 527
MboII GAAGA 2 cut(s) 311, 406
MhlI GDGCHC 1 cut(s) 121
MlsI TGGCCA 3 cut(s) 5, 53, 325
MluCI AATT 2 cut(s) 47, 179
MluNI TGGCCA 3 cut(s) 5, 53, 325
MlyI GAGTC 1 cut(s) 158
MmeI TCCRAC 1 cut(s) 428
MnlI CCTC 6 cut(s) 21, 24, 130, 152, 356, 382
Mox20I TGGCCA 3 cut(s) 5, 53, 325
MscI TGGCCA 3 cut(s) 5, 53, 325
MseI TTAA 1 cut(s) 45
Msp20I TGGCCA 3 cut(s) 5, 53, 325
MspI CCGG 1 cut(s) 280
MspR9I CCNGG 1 cut(s) 281
MwoI GCNNNNNNNGC 1 cut(s) 411
NciI CCSGG 1 cut(s) 281
NlaIII CATG 5 cut(s) 10, 39, 171, 487, 518
NlaIV GGNNCC 2 cut(s) 406, 452
NspI RCATGY 1 cut(s) 487
PagI TCATGA 1 cut(s) 514
PfeI GAWTC 2 cut(s) 146, 374
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PspN4I GGNNCC 2 cut(s) 406, 452
RsaI GTAC 2 cut(s) 482, 564
RsaNI GTAC 2 cut(s) 481, 563
SaqAI TTAA 1 cut(s) 45
SchI GAGTC 1 cut(s) 158
ScrFI CCNGG 1 cut(s) 281
SduI GDGCHC 1 cut(s) 121
SetI ASST 6 cut(s) 35, 201, 321, 393, 434, 500
SfaNI GCATC 1 cut(s) 251
Sse9I AATT 2 cut(s) 47, 179
SspMI CTAG 1 cut(s) 233
StyD4I CCNGG 1 cut(s) 279
StyI CCWWGG 2 cut(s) 173, 400
TaqI TCGA 1 cut(s) 115
TasI AATT 2 cut(s) 47, 179
TatI WGTACW 1 cut(s) 480
TfiI GAWTC 2 cut(s) 146, 374
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TspDTI ATGAA 3 cut(s) 143, 503, 531
XceI RCATGY 1 cut(s) 487
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.