Rw6G024490
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0013816
Physical Location & Seq
Forward (+)
47569094 .. 47572673
3580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G024490.1

Sequence Viewer

Length: 3339 bp
ATGCCAATGCTGTTGAGGCAGCAGCCCTCTAACACCTACAATCACCACCAAATGTCTAGGCCACTATCGTTCACCATCGATTTCTTCTTCCTCTTTGTCTTCACACTCGCAACGTCTGCTGCTTCTTTGGCTGCTGCAAATGTTGACGTTCTGACATTACATACATGGCTTCAAGGCTCTACTACCTCACCCTCTTCTTCCGATTTCTCCAACTGGAATCCTTCAGACCCCAACCCTTGTAATTGGTCCTACATTACTTGTTCTTCTCAAAACTTTCTAGCCCTTCCCTTTCCTTCAAATTTTTCCTCCCTTGCATTTCTTCAAAAGCTCGTCATTTCTGGTGCTAATCTTACTGGAACAATCTCACCTGATATTGGATATTGCAAATCGCTTCTGGTGCTTGACGTAAGTTCAAACAGTCTTGTGGGTAGTATTCCTTCAAGTATTGGCAGGCTTGAAAAGCTTCAGGACCTGATCTTAAACTCTAACCAGCTTACTGGTCAAGTACCAATGGAGCTTGGTGATTGCGCCAGCCTGAAGAATCTTCTCATATTTGATAACTACCTAAGTGGTTATCTTCCTGCTACACTCGGAAAGTTACTAAACTTGGAAGTCATTCGAGCTGGAGGGAACAAAGACGTGTCAGGAAATATCCCGGATGAGCTTGGAAACTGCAAGAACTTGCAGGTGTTGGGGCTTGCTGATACTAAAGTTTCTGACGTGTCGATTTATACAACTATGCTATCGGGTGAGATTCCACCGGATATTGGCAACTGTTCAGAACTTGTCAACTTGTTCTTGTATGAGAATGACCTTTCTGGTTCACTACCACCAGAGTTGGGCAAGCTTCATAAGCTGGAGAAGATGTTATTGTGGCAAAACAACCTTGATGGGACTATTCCTGAGGAAATTGGGAACTGCAGAAGCTTGAAGACCATAGATGTCTCTCTAAATTCTTTTTCTGGAAGCATACCTCATAACAACAACATCTCTGGTTCAATTCCCTCAGTTCTTTCCAATGCTACAAAACTTGTGCAGCTGCAGCTTGATACTAATCAGATTTCAGGCTTGATCCCAGCTGAGATGGGAATGTTGAAGGAGCTCACAGTCTTTTTTGCTTGGCAGAACAAACTCGAAGGTAGTATTCCATCAGAATTGGCCGGTTGTGAGAGTCTTCAAGCTCTAGATCTCTCACACAATGCTCTCACTGGTAACATACCTTCTGGCCTATTTCAGCTGAAAAATTTAACCAAGCTTCTCTTGATTTCTAATGACATTTCGGGTCCAATACCTTCGGTGCTTGGAAATTGTACTTCTCTTATCCGGCTAAGGCTTGTGCATAACAGAATCAGTGGGGAGATCCCAAAAGAAATTGGGTTCCTTGATAACCTCAGTTTCCTTGATCTGTCTGAAAACCGTCTTGTTGGTATCGTACCAGAAGAAATTGGAAAATGCAGTTCATTACAGCTACTCAACTTAAGTAACAACACCCTTGGAGGTAATCTGCCTAGCTCCTTTTCTTCTCTCACTAGGCTTCAAGTACTGGATGTCTCTGTGAATCAATTTGTAGGTCAGATTCCTGAGAGTTACGGTGGACTTGCTGCACTTAATAGGCTCATCCTCCGTAGCAACTCCTTAACTGAGCCAATCCCCTCTTCACTTGGTAAATGTTCAAACCTTCAACTGCTTGATCTTAGTAGCAACAAGCTCACTGGGATGATCCCAGAGCAACTGTTTGAAATTGAAGCTCTTGACATTGCTTTGAACCTGAGTTTCAATGCTTTATATGGGATAATCCCACCACAGATTTCTGCTCTCAATAAGCTATCCATACTAGACCTTTCACACAATAAGCTTGAAGGTGATCTGTTGGCACTTTCCGGGCTTATAAATCTTGTTTCTTTGAACATCTCATACAACAACTTCACTGGCTATCTTCCTGACAGCAAGGTGTTTCGACAGTTGTCAGCAACAGACTTGTTGGGAAACAAAGGATTGTGCTCTAGAGGTCATGATCTATGTTTCCTCAGCAATGGTACAACAATGGCCATGTCCAGAAGTGGCAGTTTGAGGAGGTCATGGCGACTTAAATTGGCCATTGCATTGCTAATAGCCTTGACCATTGCTTTGTCCATTTTTGGGGTAGTTGCAGTATTTCGAGCACGAAATATGAATGGAGAGGACAATGATTCTGAGATTGGAGGGGACTCATGGCCTTGGCAATTCACTCCATTTCAGAAGGTGAGTTTCTCAGTTGAGCAAGTTCTAAAATGTCTAGTAGAAACCAATGTAATAGGAAAGGGATGCTCAGGAGTTGTTTACCGGGCAGAAATGGAAAACGAAGACATTGCAGTAAAGAAGCTCTGGCCAACAACAACTGCTTCCAAATATGATTGTCAAAGTAGAGGAGTTCGTGATTCCTTTTCGGCTGAGGTGAAGACCCTTGGCTCCATTCGCCACAAGAACATTGTTAGGTTCTTGGGTTGCTGTTGGAACCGAAACACAAGATTGCTTATGTATGAGTACATGCCAAATGGGAGCTTGGGTGGTTTACTTCATGAAAGAAGTGGTAACTGCTTAGAATGGGACATCAGATATCGCATAGTACTCGGGGCTGCGCAAGGCTTGGCTTATTTGCACCATGATTCTGTTCCTCCTATAGTTCACAGAGACATTAAGGCCAACAACATTCTCATTGGTCCAGATTTTGAGCCATGCATTGCTGATTTTGGGCTTGCCAAGCTCGTTGATGAAGGAGATTTTGCTCGGTCCTCCAACACGGTTGCAGGTTCTTATGGCTACATTGCTCCTGAGTATGGATACTCAATGAAGATAACAGAGAAAAGCGATGTGTACAGCTACGGCGTAGTTGCGCTAGAAGTGCTAACAGGGAAGCAACCAATTGATCCAACCATACCAGATGGACTCCACATTGTGGATTGGGTAAGGCAGAAGAGAGGGGGAGTTGAGGTACTTGATCAAAGCTTACGAGCACGACCAGAACCCGAGATTGAGGAAATGCTGCAGACATTAGGTGTGGCATTGCTGTGCATTAACCCTACCCCGGATGACAGACCAACCATGAAAGATGTAGCAGCAATGCTCAAAGAGATTAGGCAGGAGAGAGAGGAGTGCATGAAAGCTAACATGAGGCTTCTCAATGGGTCCAATTCTGCAAATGATCATGGACAAGAAACTATGGTCAGTTGCAATGGAGGAACATCATCAGCTATGGTGAAGCAACCACATCCATACCCTCCAACAAGTACCAGCACAAGTTTCTCTGCTTCCTCATTGCTATACACTTCATCTTCCAATGTCAAAACAACTCTCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1112

Amino Acids

121.12

Weight (kDa)

5.49

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 47 - 88 1e-05 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 207 9.3e-06 Leucine-rich repeat region
LRR_14 PF23598 381 - 464 9.4e-06 Leucine-rich repeat region
LRR_8 PF13855 439 - 498 5.2e-06 Leucine rich repeat
LRR_14 PF23598 443 - 659 6.6e-14 Leucine-rich repeat region
LRR_8 PF13855 463 - 522 2.8e-07 Leucine rich repeat
LRR_8 PF13855 536 - 595 7.6e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 762 - 1034 2.6e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 762 - 1032 5.9e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013816)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48940
fragaria_vesca FvH4_2g19620
malus_domestica MD10G1169800.v1.1
prunus_persica Prupe.8G207600_v2.0.a1
pyrus_communis pycom10g14630
rosa_chinensis RchiOBHm_Chr6g0285351
rosa_laevigata RLG00000012651
rosa_multiflora Rmu_co8152086.1_g000001 Rmu_co8221716.1_g000001 Rmu_sc0012287.1_g000004
rosa_roxburghii Rroxscaffold_7G00183330
rosa_rugosa Rorug06G0173900
rosa_samantha Rh6AG284500 Rh6BG285700 Rh6CG286800 Rh6DG279800
rosa_wichuraiana Rw6G024490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1889
AarI CACCTGC 1 cut(s) 676
Acc16I TGCGCA 1 cut(s) 2619
Acc36I ACCTGC 2 cut(s) 676, 2777
AccB7I CCANNNNNTGG 1 cut(s) 2935
AclWI GGATC 4 cut(s) 1066, 1354, 1714, 2900
AcoI YGGCCR 4 cut(s) 1158, 2046, 2094, 2366
AcsI RAATTY 3 cut(s) 298, 952, 1243
AcuI CTGAAG 3 cut(s) 207, 449, 557
AdeI CACNNNGTG 1 cut(s) 2935
AfiI CCNNNNNNNGG 7 cut(s) 374, 767, 839, 2139, 2816, 2935, 3064
AflII CTTAAG 1 cut(s) 1477
AflIII ACRYGT 2 cut(s) 639, 720
AjiI CACGTC 2 cut(s) 640, 721
AjuI GAANNNNNNNTTGG 2 cut(s) 1639, 1671
Alw21I GWGCWC 4 cut(s) 1104, 2003, 2164, 2995
Alw26I GTCTC 3 cut(s) 949, 1555, 2664
AlwI GGATC 4 cut(s) 1066, 1354, 1714, 2900
AlwNI CAGNNNCTG 1 cut(s) 472
Ama87I CYCGRG 2 cut(s) 2609, 3005
AoxI GGCC 8 cut(s) 59, 1158, 1225, 2046, 2094, 2213, 2366, 2679
ApoI RAATTY 3 cut(s) 298, 952, 1243
ArsI GACNNNNNNTTYG 2 cut(s) 2110, 2142
Asp700I GAANNNNTTC 2 cut(s) 462, 615
AspLEI GCGC 3 cut(s) 530, 2620, 2875
AspS9I GGNCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
AsuC2I CCSGG 4 cut(s) 656, 1882, 2324, 3065
AvaI CYCGRG 2 cut(s) 2609, 3005
AvaII GGWCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
AxyI CCTNAGG 1 cut(s) 903
BaeI ACNNNNGTAYC 2 cut(s) 696, 729
BalI TGGCCA 3 cut(s) 2048, 2096, 2368
BanII GRGCYC 1 cut(s) 1104
BarI GAAGNNNNNNTAC 4 cut(s) 421, 453, 1204, 1236
BbsI GAAGAC 5 cut(s) 91, 938, 1166, 2349, 2444
Bbv12I GWGCWC 4 cut(s) 1104, 2003, 2164, 2995
BbvCI CCTCAGC 2 cut(s) 2027, 2430
BccI CCATC 5 cut(s) 83, 884, 1078, 1156, 2915
BceAI ACGGC 1 cut(s) 2878
BcgI CGANNNNNNTGC 4 cut(s) 2330, 2364, 2590, 2624
BciVI GTATCC 1 cut(s) 2813
BclI TGATCA 2 cut(s) 2977, 3181
BcnI CCSGG 4 cut(s) 656, 1882, 2324, 3065
BcoDI GTCTC 3 cut(s) 949, 1555, 2664
BfaI CTAG 9 cut(s) 57, 278, 1184, 1509, 1530, 1835, 2004, 2276, 2876
BfmI CTRYAG 4 cut(s) 919, 1040, 2658, 3023
BfrI CTTAAG 1 cut(s) 1477
BfuAI ACCTGC 2 cut(s) 676, 2777
BfuI GTATCC 1 cut(s) 2813
BglII AGATCT 1 cut(s) 1186
BmcAI AGTACT 2 cut(s) 1542, 2607
Bme1390I CCNGG 4 cut(s) 656, 1882, 2324, 3065
Bme18I GGWCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
BmeT110I CYCGRG 2 cut(s) 2609, 3005
BmgBI CACGTC 2 cut(s) 640, 721
BmgT120I GGNCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
BmiI GGNNCC 5 cut(s) 1284, 1379, 2449, 2495, 3166
BmrFI CCNGG 4 cut(s) 656, 1882, 2324, 3065
BmrI ACTGGG 1 cut(s) 1722
BmsI GCATC 1 cut(s) 2294
BmuI ACTGGG 1 cut(s) 1722
BoxI GACNNNNGTC 1 cut(s) 1963
BpiI GAAGAC 5 cut(s) 91, 938, 1166, 2349, 2444
BpmI CTGGAG 2 cut(s) 645, 878
Bpu10I CCTNAGC 4 cut(s) 1328, 2027, 2308, 2430
BpuMI CCSGG 4 cut(s) 656, 1882, 2324, 3065
Bsa29I ATCGAT 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 4 cut(s) 1492, 2216, 2443, 3063
BsaWI WCCGGW 1 cut(s) 760
BsaXI ACNNNNNCTCC 6 cut(s) 851, 881, 2530, 2560, 2955, 2985
Bsc4I CCNNNNNNNGG 7 cut(s) 374, 767, 839, 2139, 2816, 2935, 3064
Bse118I RCCGGY 1 cut(s) 1160
Bse1I ACTGG 7 cut(s) 218, 358, 502, 1213, 1548, 1717, 1933
Bse21I CCTNAGG 1 cut(s) 903
Bse8I GATNNNNATC 1 cut(s) 1053
BseCI ATCGAT 1 cut(s) 78
BseDI CCNNGG 4 cut(s) 1492, 2216, 2443, 3063
BseGI GGATG 7 cut(s) 664, 1552, 1617, 1722, 2309, 3073, 3247
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 7 cut(s) 374, 767, 839, 2139, 2816, 2935, 3064
BseNI ACTGG 7 cut(s) 218, 358, 502, 1213, 1548, 1717, 1933
BseRI GAGGAG 3 cut(s) 2086, 2421, 3143
BseYI CCCAGC 1 cut(s) 1075
BsgI GTGCAG 2 cut(s) 1055, 1587
BshFI GGCC 8 cut(s) 61, 1160, 1227, 2048, 2096, 2215, 2368, 2681
BshVI ATCGAT 1 cut(s) 78
BsiHKAI GWGCWC 4 cut(s) 1104, 2003, 2164, 2995
BsiHKCI CYCGRG 2 cut(s) 2609, 3005
BsiSI CCGG 7 cut(s) 656, 761, 1161, 1324, 1881, 2323, 3065
BslFI GGGAC 3 cut(s) 907, 2219, 2600
BslI CCNNNNNNNGG 7 cut(s) 374, 767, 839, 2139, 2816, 2935, 3064
BsmAI GTCTC 3 cut(s) 949, 1555, 2664
BsmFI GGGAC 3 cut(s) 907, 2219, 2600
BsnI GGCC 8 cut(s) 61, 1160, 1227, 2048, 2096, 2215, 2368, 2681
BsoBI CYCGRG 2 cut(s) 2609, 3005
Bsp1286I GDGCHC 4 cut(s) 1104, 2003, 2164, 2995
Bsp1407I TGTACA 1 cut(s) 2853
BspANI GGCC 8 cut(s) 61, 1160, 1227, 2048, 2096, 2215, 2368, 2681
BspDI ATCGAT 1 cut(s) 78
BspHI TCATGA 2 cut(s) 2011, 2557
BspLI GGNNCC 5 cut(s) 1284, 1379, 2449, 2495, 3166
BspMAI CTGCAG 3 cut(s) 923, 1044, 3027
BspMI ACCTGC 2 cut(s) 676, 2777
BspPI GGATC 4 cut(s) 1066, 1354, 1714, 2900
BspTI CTTAAG 1 cut(s) 1477
BsrFI RCCGGY 1 cut(s) 1160
BsrGI TGTACA 1 cut(s) 2853
BsrI ACTGG 7 cut(s) 218, 358, 502, 1213, 1548, 1717, 1933
BssAI RCCGGY 1 cut(s) 1160
BssECI CCNNGG 4 cut(s) 1492, 2216, 2443, 3063
BssT1I CCWWGG 3 cut(s) 1492, 2216, 2443
Bst4CI ACNGT 8 cut(s) 419, 776, 1108, 1418, 1592, 1734, 1962, 2782
Bst6I CTCTTC 3 cut(s) 199, 1660, 2948
BstAFI CTTAAG 1 cut(s) 1477
BstAPI GCANNNNNTGC 1 cut(s) 116
BstAUI TGTACA 1 cut(s) 2853
BstC8I GCNNGC 5 cut(s) 452, 532, 699, 845, 2736
BstF5I GGATG 7 cut(s) 664, 1552, 1617, 1722, 2309, 3073, 3247
BstHHI GCGC 3 cut(s) 530, 2620, 2875
BstMAI GTCTC 3 cut(s) 949, 1555, 2664
BstNSI RCATGY 1 cut(s) 2530
BstPAI GACNNNNGTC 1 cut(s) 1963
BstSCI CCNGG 4 cut(s) 654, 1880, 2322, 3063
BstSFI CTRYAG 4 cut(s) 919, 1040, 2658, 3023
BstV2I GAAGAC 5 cut(s) 91, 938, 1166, 2349, 2444
BstX2I RGATCY 2 cut(s) 1186, 1359
BstXI CCANNNNNNTGG 1 cut(s) 497
BstYI RGATCY 2 cut(s) 1186, 1359
Bsu15I ATCGAT 1 cut(s) 78
Bsu36I CCTNAGG 1 cut(s) 903
BsuI GTATCC 1 cut(s) 2813
BsuRI GGCC 8 cut(s) 61, 1160, 1227, 2048, 2096, 2215, 2368, 2681
BsuTUI ATCGAT 1 cut(s) 78
BtgZI GCGATG 1 cut(s) 2862
BtrI CACGTC 2 cut(s) 640, 721
BtsCI GGATG 7 cut(s) 664, 1552, 1617, 1722, 2309, 3073, 3247
BtsIMutI CAGTG 4 cut(s) 1206, 1357, 1710, 1926
BveI ACCTGC 2 cut(s) 676, 2777
Cac8I GCNNGC 5 cut(s) 452, 532, 699, 845, 2736
CaiI CAGNNNCTG 1 cut(s) 472
CciI TCATGA 2 cut(s) 2011, 2557
CfoI GCGC 3 cut(s) 530, 2620, 2875
Cfr10I RCCGGY 1 cut(s) 1160
Cfr13I GGNCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
ClaI ATCGAT 1 cut(s) 78
CspCI CAANNNNNGTGG 2 cut(s) 819, 854
DraIII CACNNNGTG 1 cut(s) 2935
EaeI YGGCCR 4 cut(s) 1158, 2046, 2094, 2366
Eam1104I CTCTTC 3 cut(s) 199, 1660, 2948
EarI CTCTTC 3 cut(s) 199, 1660, 2948
Ecl136II GAGCTC 1 cut(s) 1102
Eco130I CCWWGG 3 cut(s) 1492, 2216, 2443
Eco24I GRGCYC 1 cut(s) 1104
Eco32I GATATC 1 cut(s) 2597
Eco47I GGWCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
Eco53kI GAGCTC 1 cut(s) 1102
Eco57I CTGAAG 3 cut(s) 207, 449, 557
Eco81I CCTNAGG 1 cut(s) 903
Eco88I CYCGRG 2 cut(s) 2609, 3005
EcoICRI GAGCTC 1 cut(s) 1102
EcoO109I RGGNCCY 1 cut(s) 469
EcoRV GATATC 1 cut(s) 2597
EcoT14I CCWWGG 3 cut(s) 1492, 2216, 2443
EcoT22I ATGCAT 1 cut(s) 2720
EcoT38I GRGCYC 1 cut(s) 1104
ErhI CCWWGG 3 cut(s) 1492, 2216, 2443
FalI AAGNNNNNCTT 2 cut(s) 1244, 1276
FaqI GGGAC 3 cut(s) 907, 2219, 2600
FbaI TGATCA 2 cut(s) 2977, 3181
FokI GGATG 7 cut(s) 671, 1559, 1604, 1729, 2316, 3080, 3234
FriOI GRGCYC 1 cut(s) 1104
FspBI CTAG 9 cut(s) 57, 278, 1184, 1509, 1530, 1835, 2004, 2276, 2876
FspI TGCGCA 1 cut(s) 2619
GlaI GCGC 3 cut(s) 529, 2619, 2874
GsaI CCCAGC 1 cut(s) 1079
GsuI CTGGAG 2 cut(s) 645, 878
HaeIII GGCC 8 cut(s) 61, 1160, 1227, 2048, 2096, 2215, 2368, 2681
HapII CCGG 7 cut(s) 656, 761, 1161, 1324, 1881, 2323, 3065
HhaI GCGC 3 cut(s) 530, 2620, 2875
Hin6I GCGC 3 cut(s) 528, 2618, 2873
HinP1I GCGC 3 cut(s) 528, 2618, 2873
HincII GTYRAC 2 cut(s) 145, 790
HindII GTYRAC 2 cut(s) 145, 790
HindIII AAGCTT 6 cut(s) 461, 845, 925, 1253, 1853, 2983
HpaII CCGG 7 cut(s) 656, 761, 1161, 1324, 1881, 2323, 3065
Hpy166II GTNNAC 9 cut(s) 72, 145, 790, 824, 1595, 2320, 2552, 2665, 2854
Hpy8I GTNNAC 9 cut(s) 72, 145, 790, 824, 1595, 2320, 2552, 2665, 2854
HpyCH4III ACNGT 8 cut(s) 419, 776, 1108, 1418, 1592, 1734, 1962, 2782
HpyCH4IV ACGT 5 cut(s) 113, 147, 405, 639, 720
HpySE526I ACGT 5 cut(s) 113, 147, 405, 639, 720
HspAI GCGC 3 cut(s) 528, 2618, 2873
Ksp22I TGATCA 2 cut(s) 2977, 3181
LmnI GCTCC 6 cut(s) 514, 1099, 1517, 2453, 2538, 2812
LweI GCATC 1 cut(s) 2294
MaeI CTAG 9 cut(s) 57, 278, 1184, 1509, 1530, 1835, 2004, 2276, 2876
MaeII ACGT 5 cut(s) 113, 147, 405, 639, 720
MaeIII GTNAC 5 cut(s) 597, 1211, 1481, 1586, 2570
MfeI CAATTG 1 cut(s) 2901
MflI RGATCY 2 cut(s) 1186, 1359
MhlI GDGCHC 4 cut(s) 1104, 2003, 2164, 2995
MlsI TGGCCA 3 cut(s) 2048, 2096, 2368
MluNI TGGCCA 3 cut(s) 2048, 2096, 2368
MlyI GAGTC 3 cut(s) 1180, 2201, 2919
MmeI TCCRAC 5 cut(s) 234, 2471, 2799, 2933, 3284
Mox20I TGGCCA 3 cut(s) 2048, 2096, 2368
Mph1103I ATGCAT 1 cut(s) 2720
MroXI GAANNNNTTC 2 cut(s) 462, 615
MscI TGGCCA 3 cut(s) 2048, 2096, 2368
MseI TTAA 8 cut(s) 479, 1247, 1478, 1608, 1637, 2088, 2676, 3054
MslI CAYNNNNRTG 2 cut(s) 1715, 3046
Msp20I TGGCCA 3 cut(s) 2048, 2096, 2368
MspA1I CMGCKG 3 cut(s) 1039, 1079, 1237
MspCI CTTAAG 1 cut(s) 1477
MspI CCGG 7 cut(s) 656, 761, 1161, 1324, 1881, 2323, 3065
MspR9I CCNGG 4 cut(s) 656, 1882, 2324, 3065
MunI CAATTG 1 cut(s) 2901
NciI CCSGG 4 cut(s) 656, 1882, 2324, 3065
NlaIV GGNNCC 5 cut(s) 1284, 1379, 2449, 2495, 3166
NsbI TGCGCA 1 cut(s) 2619
NsiI ATGCAT 1 cut(s) 2720
NspI RCATGY 1 cut(s) 2530
PagI TCATGA 2 cut(s) 2011, 2557
PaqCI CACCTGC 1 cut(s) 676
PdmI GAANNNNTTC 2 cut(s) 462, 615
PfeI GAWTC 9 cut(s) 217, 541, 754, 1347, 1558, 1576, 2189, 2417, 2645
PflMI CCANNNNNTGG 1 cut(s) 2935
PfoI TCCNGGA 1 cut(s) 654
PleI GAGTC 3 cut(s) 1179, 2201, 2919
PpsI GAGTC 3 cut(s) 1179, 2201, 2919
PpuMI RGGWCCY 1 cut(s) 469
PshAI GACNNNNGTC 1 cut(s) 1963
PsiI TTATAA 1 cut(s) 1889
Psp124BI GAGCTC 1 cut(s) 1104
Psp5II RGGWCCY 1 cut(s) 469
PspFI CCCAGC 1 cut(s) 1075
PspN4I GGNNCC 5 cut(s) 1284, 1379, 2449, 2495, 3166
PspPI GGNCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
PspPPI RGGWCCY 1 cut(s) 469
PsrI GAACNNNNNNTAC 2 cut(s) 1898, 1930
PstI CTGCAG 3 cut(s) 923, 1044, 3027
PstNI CAGNNNCTG 1 cut(s) 472
PsuI RGATCY 2 cut(s) 1186, 1359
PvuII CAGCTG 3 cut(s) 1039, 1079, 1237
RseI CAYNNNNRTG 2 cut(s) 1715, 3046
SacI GAGCTC 1 cut(s) 1104
SaqAI TTAA 8 cut(s) 479, 1247, 1478, 1608, 1637, 2088, 2676, 3054
Sau96I GGNCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
ScaI AGTACT 2 cut(s) 1542, 2607
SchI GAGTC 3 cut(s) 1180, 2201, 2919
ScrFI CCNGG 4 cut(s) 656, 1882, 2324, 3065
SduI GDGCHC 4 cut(s) 1104, 2003, 2164, 2995
SfaNI GCATC 1 cut(s) 2294
SfcI CTRYAG 4 cut(s) 919, 1040, 2658, 3023
SinI GGWCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
SmiMI CAYNNNNRTG 2 cut(s) 1715, 3046
SmlI CTYRAG 1 cut(s) 1477
SmoI CTYRAG 1 cut(s) 1477
SspMI CTAG 9 cut(s) 57, 278, 1184, 1509, 1530, 1835, 2004, 2276, 2876
SstI GAGCTC 1 cut(s) 1104
StyD4I CCNGG 4 cut(s) 654, 1880, 2322, 3063
StyI CCWWGG 3 cut(s) 1492, 2216, 2443
TaaI ACNGT 8 cut(s) 419, 776, 1108, 1418, 1592, 1734, 1962, 2782
TaiI ACGT 5 cut(s) 116, 150, 408, 642, 723
TaqI TCGA 6 cut(s) 78, 619, 725, 1134, 1957, 2158
TaqII GACCGA 1 cut(s) 2757
TatI WGTACW 5 cut(s) 1310, 1540, 2523, 2605, 2853
TfiI GAWTC 9 cut(s) 217, 541, 754, 1347, 1558, 1576, 2189, 2417, 2645
Tru1I TTAA 8 cut(s) 479, 1247, 1478, 1608, 1637, 2088, 2676, 3054
Tru9I TTAA 8 cut(s) 479, 1247, 1478, 1608, 1637, 2088, 2676, 3054
TscAI CASTG 4 cut(s) 1213, 1357, 1717, 1933
TspGWI ACGGA 1 cut(s) 1613
TspRI CASTG 4 cut(s) 1213, 1357, 1717, 1933
Van91I CCANNNNNTGG 1 cut(s) 2935
Vha464I CTTAAG 1 cut(s) 1477
VpaK11BI GGWCC 6 cut(s) 246, 469, 1283, 2699, 2769, 3165
XapI RAATTY 3 cut(s) 298, 952, 1243
XbaI TCTAGA 2 cut(s) 1183, 2003
XceI RCATGY 1 cut(s) 2530
XmnI GAANNNNTTC 2 cut(s) 462, 615
XspI CTAG 9 cut(s) 57, 278, 1184, 1509, 1530, 1835, 2004, 2276, 2876
ZrmI AGTACT 2 cut(s) 1542, 2607
Zsp2I ATGCAT 1 cut(s) 2720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.