Rmu_co8274343.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8274343.1
Physical Location & Seq
Forward (+)
1 .. 755
755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8274343.1_g000001.1.cds

Sequence Viewer

Length: 371 bp
aacccatcttttcttttgaactgcctccagcgaatacccagctcttccttctaagttctacccactctatagtcactaccccagaaacaaaggaagtgaagcttaaagattctgaaaccaaccagacaagtgattcaagtgaactaccaatgtcgacttccatgtccaacaactcaacccacctcctcctcctcctccttttcgtctccggcgttgccgtcatcactcccatcctcgccaccgaccacattgtgggtgctaatcgtggctggaacccagggatcaactacaccctctgggccaacaaccacactttctatgttggggacttcatttgtaagcaccctattaaaccctacctctctttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.49

Weight (kDa)

5.89

Isoelectric Point (pI)

31.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014769)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 162
AccB7I CCANNNNNTGG 1 cut(s) 252
AccI GTMKAC 1 cut(s) 154
AclWI GGATC 1 cut(s) 289
AdeI CACNNNGTG 1 cut(s) 252
AfiI CCNNNNNNNGG 1 cut(s) 252
AgsI TTSAA 2 cut(s) 19, 137
AjnI CCWGG 1 cut(s) 276
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 2 cut(s) 42, 102
AluI AGCT 2 cut(s) 42, 102
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 1 cut(s) 289
AoxI GGCC 1 cut(s) 299
AspS9I GGNCC 1 cut(s) 299
BccI CCATC 2 cut(s) 13, 238
BceAI ACGGC 1 cut(s) 202
BciT130I CCWGG 1 cut(s) 278
BcoDI GTCTC 1 cut(s) 210
BfmI CTRYAG 1 cut(s) 68
Bme1390I CCNGG 1 cut(s) 278
BmgT120I GGNCC 1 cut(s) 299
BmiI GGNNCC 1 cut(s) 274
BmrFI CCNGG 1 cut(s) 278
BpmI CTGGAG 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 276, 277
Bsc4I CCNNNNNNNGG 1 cut(s) 252
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 2 cut(s) 276, 277
BseGI GGATG 1 cut(s) 230
BseLI CCNNNNNNNGG 1 cut(s) 252
BseRI GAGGAG 4 cut(s) 175, 178, 181, 184
BseYI CCCAGC 1 cut(s) 38
BshFI GGCC 1 cut(s) 301
BsiSI CCGG 1 cut(s) 209
BslFI GGGAC 1 cut(s) 340
BslI CCNNNNNNNGG 1 cut(s) 252
BsmAI GTCTC 1 cut(s) 210
BsmBI CGTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 340
BsnI GGCC 1 cut(s) 301
Bsp143I GATC 1 cut(s) 281
BspANI GGCC 1 cut(s) 301
BspLI GGNNCC 1 cut(s) 274
BspPI GGATC 1 cut(s) 289
BspQI GCTCTTC 1 cut(s) 49
BssECI CCNNGG 2 cut(s) 276, 277
BssMI GATC 1 cut(s) 281
Bst2UI CCWGG 1 cut(s) 278
Bst6I CTCTTC 1 cut(s) 49
BstDEI CTNAG 1 cut(s) 52
BstF5I GGATG 1 cut(s) 230
BstKTI GATC 1 cut(s) 284
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 1 cut(s) 281
BstNI CCWGG 1 cut(s) 278
BstSCI CCNGG 1 cut(s) 276
BstSFI CTRYAG 1 cut(s) 68
BsuRI GGCC 1 cut(s) 301
BtsCI GGATG 1 cut(s) 230
Cfr13I GGNCC 1 cut(s) 299
CviAII CATG 1 cut(s) 162
CviJI RGCY 4 cut(s) 42, 102, 269, 301
CviKI_1 RGCY 4 cut(s) 42, 102, 269, 301
DdeI CTNAG 1 cut(s) 52
DpnI GATC 1 cut(s) 283
DpnII GATC 1 cut(s) 281
DraIII CACNNNGTG 1 cut(s) 252
DrdI GACNNNNNNGTC 1 cut(s) 162
DseDI GACNNNNNNGTC 1 cut(s) 162
Eam1104I CTCTTC 1 cut(s) 49
EarI CTCTTC 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 276
Esp3I CGTCTC 1 cut(s) 210
FaeI CATG 1 cut(s) 165
FaiI YATR 3 cut(s) 70, 163, 320
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FaqI GGGAC 1 cut(s) 340
FatI CATG 1 cut(s) 161
FblI GTMKAC 1 cut(s) 154
FokI GGATG 1 cut(s) 217
GsaI CCCAGC 1 cut(s) 42
GsuI CTGGAG 1 cut(s) 11
HaeIII GGCC 1 cut(s) 301
HapII CCGG 1 cut(s) 209
Hin1II CATG 1 cut(s) 165
HincII GTYRAC 1 cut(s) 155
HindII GTYRAC 1 cut(s) 155
HindIII AAGCTT 1 cut(s) 100
HinfI GANTC 2 cut(s) 109, 133
HpaII CCGG 1 cut(s) 209
Hpy166II GTNNAC 2 cut(s) 142, 155
Hpy188I TCNGA 1 cut(s) 114
Hpy8I GTNNAC 2 cut(s) 142, 155
HpyAV CCTTC 1 cut(s) 58
HpyF3I CTNAG 1 cut(s) 52
Hsp92II CATG 1 cut(s) 165
Kzo9I GATC 1 cut(s) 281
LguI GCTCTTC 1 cut(s) 49
LpnPI CCDG 9 cut(s) 41, 52, 95, 136, 222, 255, 263, 282, 290
MaeIII GTNAC 1 cut(s) 72
MalI GATC 1 cut(s) 283
MboI GATC 1 cut(s) 281
MboII GAAGA 1 cut(s) 36
MmeI TCCRAC 1 cut(s) 191
MnlI CCTC 9 cut(s) 35, 193, 196, 199, 202, 205, 244, 304, 370
MseI TTAA 2 cut(s) 104, 350
MspI CCGG 1 cut(s) 209
MspR9I CCNGG 1 cut(s) 278
MvaI CCWGG 1 cut(s) 278
NdeII GATC 1 cut(s) 281
NlaIII CATG 1 cut(s) 165
NlaIV GGNNCC 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 72
PasI CCCWGGG 1 cut(s) 277
PciSI GCTCTTC 1 cut(s) 49
PcsI WCGNNNNNNNCGW 1 cut(s) 209
PfeI GAWTC 2 cut(s) 109, 133
PflMI CCANNNNNTGG 1 cut(s) 252
Psp6I CCWGG 1 cut(s) 276
PspFI CCCAGC 1 cut(s) 38
PspGI CCWGG 1 cut(s) 276
PspN4I GGNNCC 1 cut(s) 274
PspPI GGNCC 1 cut(s) 299
SalI GTCGAC 1 cut(s) 153
SapI GCTCTTC 1 cut(s) 49
SaqAI TTAA 2 cut(s) 104, 350
Sau3AI GATC 1 cut(s) 281
Sau96I GGNCC 1 cut(s) 299
ScrFI CCNGG 1 cut(s) 278
SetI ASST 4 cut(s) 44, 104, 185, 362
SfcI CTRYAG 1 cut(s) 68
StyD4I CCNGG 1 cut(s) 276
TaqI TCGA 1 cut(s) 154
TfiI GAWTC 2 cut(s) 109, 133
Tru1I TTAA 2 cut(s) 104, 350
Tru9I TTAA 2 cut(s) 104, 350
TseFI GTSAC 1 cut(s) 72
Tsp45I GTSAC 1 cut(s) 72
TspDTI ATGAA 1 cut(s) 321
Van91I CCANNNNNTGG 1 cut(s) 252
XmiI GTMKAC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.