Rmu_co8465215.1_g000001

ABC transporter F family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8465215.1
Physical Location & Seq
Forward (+)
29 .. 1600
1572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8465215.1_g000001.1.cds

Sequence Viewer

Length: 1572 bp
atggggaagtctaccctcctgaagcttcttgcttggaggaagattccagtaccaaaaaacatcgatgttcttttagtggaacaggaggtagttggtgatgatagaagtgctctggaagcagttgtttcagctaatgaagaacttgtcaagctccgggaagaggttgcagcattgcagaattcagattctgctcccggtggtgaggaagaggatagtcatgatgatgatgcaggagagaagcttgctgagttgtacgatcaattgcagctgatgggatcggatgctgctgaagcccaggcttcaaagattcttgccggtttgggatttacaaaggatatgcaaggccgccccactaagtcattcagtggtggttggagaatgagaatttcattagctagggcactttttgtgcaaccaactcttttgttgcttgatgaaccaacaaatcatctcgacttgagggctgttctttggttggaggagtatttgtgccgctggaaaaaaactttggtggttgtctcacacgatcgtgatttccttaacacagtgtgcacagagattattcatctgcatgatctgaagctccacttctaccgtggaaattttgatgattttgaaactgggtatgagcagcgccgcaaagaggtaaacaaaaagtttgaaatttatgataagcaggtgaaagctgccagaaggagtggaagtcgggttcaacaggagaaggtcaaggaccgagcaaaatttttagttaataaggaagcagcaaagagcaagggcaagggaaaggttgaggaggatgacacccaagttgaggctcctaagaagtggagggattacagcgtcgagttccactttcctgaacctactgagcttacacctccactcctgcaactcattgatgtcagctttagttatccgaaccgggaagatttcaggctgtctgatgttgatgtcggtattgatatgggtactcgtgttgcaattgttggacctaacggagccggaaagtctactctgctcaaccttcttgcaggtgatttggttcctactgagggtgaagtaaggagaagtcagaagttgaggattggtaggtattcacagcactttgtggacctcctgacaatggacgaaacccctgtttcatacctacttcgtcttcatcctgaccaagagggatttagcaagcaggaggctgtgcgtgcaaaactcggaaagtatggactccctagccacaaccatctgactcctattgcaaaattatctggaggacagaaagctcgagttgtcttcacatcaatatccatgtcaaaaccccacattctgcttttggatgaacccacgaatcatttagatatgcagagcattgatgcactggctgatgcacttgatgaattcagcggtggggttgtactagtaagtcacgactccagacttatttcacgtgtgtgtgatgatgaagagaggagtcaaatttggattgttgaagatggtactgtgaagaaatttgatagaagttttgatgagtacaaggatgagctacaaaaagaaattagagatgaggtggatgagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

523

Amino Acids

59.14

Weight (kDa)

5.34

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 667, 1022
Acc36I ACCTGC 2 cut(s) 667, 1022
AccI GTMKAC 2 cut(s) 11, 1010
AciI CCGC 4 cut(s) 346, 493, 637, 1398
AclWI GGATC 1 cut(s) 283
AcsI RAATTY 8 cut(s) 178, 384, 601, 663, 740, 1391, 1470, 1502
AcuI CTGAAG 3 cut(s) 41, 309, 599
AcvI CACGTG 1 cut(s) 1442
AdeI CACNNNGTG 2 cut(s) 549, 1108
AfaI GTAC 6 cut(s) 51, 254, 970, 1410, 1492, 1526
AfiI CCNNNNNNNGG 5 cut(s) 160, 643, 811, 1052, 1123
AflIII ACRYGT 1 cut(s) 1441
AgsI TTSAA 5 cut(s) 303, 617, 662, 713, 1484
AhlI ACTAGT 1 cut(s) 1411
AjnI CCWGG 1 cut(s) 294
AjuI GAANNNNNNNTTGG 2 cut(s) 491, 523
AleI CACNNNNGTG 2 cut(s) 528, 1444
AloI GAACNNNNNNTCC 2 cut(s) 693, 725
Alw21I GWGCWC 2 cut(s) 112, 554
Alw26I GTCTC 1 cut(s) 523
Alw44I GTGCAC 1 cut(s) 550
AlwI GGATC 1 cut(s) 283
AlwNI CAGNNNCTG 1 cut(s) 188
Ama87I CYCGRG 1 cut(s) 1278
AoxI GGCC 1 cut(s) 343
ApaLI GTGCAC 1 cut(s) 550
ApeKI GCWGC 6 cut(s) 167, 265, 284, 631, 686, 761
ApoI RAATTY 8 cut(s) 178, 384, 601, 663, 740, 1391, 1470, 1502
AspLEI GCGC 1 cut(s) 636
AspS9I GGNCC 3 cut(s) 730, 989, 1111
AsuC2I CCSGG 3 cut(s) 155, 195, 923
AsuHPI GGTGA 5 cut(s) 107, 212, 691, 1046, 1067
AvaI CYCGRG 1 cut(s) 1278
AvaII GGWCC 3 cut(s) 730, 989, 1111
BaeGI GKGCMC 2 cut(s) 403, 554
BaeI ACNNNNGTAYC 2 cut(s) 960, 993
BauI CACGAG 1 cut(s) 972
BbrPI CACGTG 1 cut(s) 1442
BbsI GAAGAC 2 cut(s) 1148, 1279
Bbv12I GWGCWC 2 cut(s) 112, 554
BbvI GCAGC 6 cut(s) 179, 271, 277, 643, 673, 773
BccI CCATC 3 cut(s) 265, 1245, 1481
BciT130I CCWGG 1 cut(s) 296
BcnI CCSGG 3 cut(s) 155, 195, 923
BcoDI GTCTC 1 cut(s) 523
BcuI ACTAGT 1 cut(s) 1411
BfaI CTAG 3 cut(s) 396, 1227, 1412
BfoI RGCGCY 1 cut(s) 637
BfuAI ACCTGC 2 cut(s) 667, 1022
BisI GCNGC 9 cut(s) 168, 266, 285, 346, 493, 632, 637, 687, 762
BlsI GCNGC 9 cut(s) 169, 267, 286, 347, 494, 633, 638, 688, 763
Bme1390I CCNGG 4 cut(s) 155, 195, 296, 923
Bme18I GGWCC 3 cut(s) 730, 989, 1111
BmeT110I CYCGRG 1 cut(s) 1278
BmgT120I GGNCC 3 cut(s) 730, 989, 1111
BmiI GGNNCC 3 cut(s) 816, 1000, 1044
BmrFI CCNGG 4 cut(s) 155, 195, 296, 923
BmrI ACTGGG 1 cut(s) 630
BmsI GCATC 4 cut(s) 217, 271, 1357, 1369
BmuI ACTGGG 1 cut(s) 630
BpiI GAAGAC 2 cut(s) 1148, 1279
BpmI CTGGAG 2 cut(s) 1284, 1411
BpuEI CTTGAG 1 cut(s) 478
BpuMI CCSGG 3 cut(s) 155, 195, 923
Bsa29I ATCGAT 1 cut(s) 63
BsaAI YACGTR 1 cut(s) 1442
BsaJI CCNNGG 2 cut(s) 294, 595
BsaXI ACNNNNNCTCC 6 cut(s) 473, 503, 688, 718, 867, 897
Bsc4I CCNNNNNNNGG 5 cut(s) 160, 643, 811, 1052, 1123
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 3 cut(s) 47, 625, 1377
Bse3DI GCAATG 1 cut(s) 170
BseBI CCWGG 1 cut(s) 296
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 2 cut(s) 294, 595
BseGI GGATG 6 cut(s) 286, 802, 1159, 1336, 1537, 1570
BseLI CCNNNNNNNGG 5 cut(s) 160, 643, 811, 1052, 1123
BseMI GCAATG 1 cut(s) 170
BseMII CTCAG 3 cut(s) 237, 858, 1041
BseNI ACTGG 3 cut(s) 47, 625, 1377
BseRI GAGGAG 3 cut(s) 494, 806, 1477
BseSI GKGCMC 2 cut(s) 403, 554
BseXI GCAGC 6 cut(s) 179, 271, 277, 643, 673, 773
Bsh1285I CGRYCG 1 cut(s) 529
BshFI GGCC 1 cut(s) 345
BshVI ATCGAT 1 cut(s) 63
BsiEI CGRYCG 1 cut(s) 529
BsiHKAI GWGCWC 2 cut(s) 112, 554
BsiHKCI CYCGRG 1 cut(s) 1278
BsiSI CCGG 5 cut(s) 154, 195, 315, 922, 1002
BslI CCNNNNNNNGG 5 cut(s) 160, 643, 811, 1052, 1123
BsmAI GTCTC 1 cut(s) 523
BsnI GGCC 1 cut(s) 345
BsoBI CYCGRG 1 cut(s) 1278
Bsp1286I GDGCHC 3 cut(s) 112, 403, 554
Bsp143I GATC 4 cut(s) 256, 275, 526, 574
BspACI CCGC 4 cut(s) 346, 493, 637, 1398
BspANI GGCC 1 cut(s) 345
BspCNI CTCAG 3 cut(s) 238, 859, 1042
BspDI ATCGAT 1 cut(s) 63
BspHI TCATGA 1 cut(s) 217
BspLI GGNNCC 3 cut(s) 816, 1000, 1044
BspMI ACCTGC 2 cut(s) 667, 1022
BspPI GGATC 1 cut(s) 283
BsrDI GCAATG 1 cut(s) 170
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 3 cut(s) 47, 625, 1377
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 2 cut(s) 294, 595
BssMI GATC 4 cut(s) 256, 275, 526, 574
BssSI CACGAG 1 cut(s) 972
Bst2BI CACGAG 1 cut(s) 972
Bst2UI CCWGG 1 cut(s) 296
Bst4CI ACNGT 3 cut(s) 547, 596, 1495
Bst6I CTCTTC 3 cut(s) 153, 201, 1452
BstBAI YACGTR 1 cut(s) 1442
BstC8I GCNNGC 3 cut(s) 243, 1184, 1200
BstDEI CTNAG 5 cut(s) 246, 354, 819, 867, 1050
BstDSI CCRYGG 1 cut(s) 595
BstF5I GGATG 6 cut(s) 286, 802, 1159, 1336, 1537, 1570
BstH2I RGCGCY 1 cut(s) 637
BstHHI GCGC 1 cut(s) 636
BstKTI GATC 4 cut(s) 259, 278, 529, 577
BstMAI GTCTC 1 cut(s) 523
BstMBI GATC 4 cut(s) 256, 275, 526, 574
BstMCI CGRYCG 1 cut(s) 529
BstMWI GCNNNNNNNGC 3 cut(s) 116, 290, 1199
BstNI CCWGG 1 cut(s) 296
BstSCI CCNGG 4 cut(s) 153, 193, 294, 921
BstSLI GKGCMC 2 cut(s) 403, 554
BstV1I GCAGC 6 cut(s) 179, 271, 277, 643, 673, 773
BstV2I GAAGAC 2 cut(s) 1148, 1279
Bsu15I ATCGAT 1 cut(s) 63
BsuRI GGCC 1 cut(s) 345
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 595
BtsCI GGATG 6 cut(s) 286, 802, 1159, 1336, 1537, 1570
BtsIMutI CAGTG 3 cut(s) 370, 552, 1370
BveI ACCTGC 2 cut(s) 667, 1022
Cac8I GCNNGC 3 cut(s) 243, 1184, 1200
CaiI CAGNNNCTG 1 cut(s) 188
CciI TCATGA 1 cut(s) 217
CfoI GCGC 1 cut(s) 636
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 3 cut(s) 730, 989, 1111
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 1 cut(s) 829
Csp6I GTAC 6 cut(s) 50, 253, 969, 1409, 1491, 1525
CviAII CATG 3 cut(s) 218, 572, 1303
CviQI GTAC 6 cut(s) 50, 253, 969, 1409, 1491, 1525
DdeI CTNAG 5 cut(s) 246, 354, 819, 867, 1050
DpnI GATC 4 cut(s) 258, 277, 528, 576
DpnII GATC 4 cut(s) 256, 275, 526, 574
DraIII CACNNNGTG 2 cut(s) 549, 1108
Eam1104I CTCTTC 3 cut(s) 153, 201, 1452
EarI CTCTTC 3 cut(s) 153, 201, 1452
Eco47I GGWCC 3 cut(s) 730, 989, 1111
Eco57I CTGAAG 3 cut(s) 41, 309, 599
Eco72I CACGTG 1 cut(s) 1442
Eco88I CYCGRG 1 cut(s) 1278
EcoRI GAATTC 2 cut(s) 178, 1391
EcoRII CCWGG 1 cut(s) 294
FaeI CATG 3 cut(s) 221, 575, 1306
FalI AAGNNNNNCTT 2 cut(s) 572, 604
FatI CATG 3 cut(s) 217, 571, 1302
FblI GTMKAC 2 cut(s) 11, 1010
Fnu4HI GCNGC 9 cut(s) 168, 266, 285, 346, 493, 632, 637, 687, 762
FokI GGATG 5 cut(s) 293, 809, 1146, 1343, 1544
Fsp4HI GCNGC 9 cut(s) 168, 266, 285, 346, 493, 632, 637, 687, 762
FspBI CTAG 3 cut(s) 396, 1227, 1412
GlaI GCGC 1 cut(s) 635
GluI GCNGC 9 cut(s) 168, 266, 285, 346, 493, 632, 637, 687, 762
GsuI CTGGAG 2 cut(s) 1284, 1411
HaeII RGCGCY 1 cut(s) 637
HaeIII GGCC 1 cut(s) 345
HapII CCGG 5 cut(s) 154, 195, 315, 922, 1002
HgaI GACGC 1 cut(s) 829
HhaI GCGC 1 cut(s) 636
Hin1II CATG 3 cut(s) 221, 575, 1306
Hin6I GCGC 1 cut(s) 634
HinP1I GCGC 1 cut(s) 634
HindIII AAGCTT 2 cut(s) 23, 239
HinfI GANTC 8 cut(s) 43, 185, 307, 1221, 1243, 1342, 1424, 1465
HpaII CCGG 5 cut(s) 154, 195, 315, 922, 1002
HphI GGTGA 5 cut(s) 107, 212, 691, 1046, 1067
Hpy166II GTNNAC 5 cut(s) 12, 552, 649, 1011, 1111
Hpy188I TCNGA 8 cut(s) 184, 280, 579, 918, 943, 1074, 1211, 1242
Hpy8I GTNNAC 5 cut(s) 12, 552, 649, 1011, 1111
Hpy99I CGWCG 1 cut(s) 845
HpyAV CCTTC 3 cut(s) 687, 715, 1034
HpyCH4III ACNGT 3 cut(s) 547, 596, 1495
HpyCH4IV ACGT 1 cut(s) 1441
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 290, 1199
HpyF3I CTNAG 5 cut(s) 246, 354, 819, 867, 1050
HpySE526I ACGT 1 cut(s) 1441
Hsp92II CATG 3 cut(s) 221, 575, 1306
HspAI GCGC 1 cut(s) 634
Kzo9I GATC 4 cut(s) 256, 275, 526, 574
LmnI GCTCC 5 cut(s) 156, 196, 588, 820, 998
Lsp1109I GCAGC 6 cut(s) 179, 271, 277, 643, 673, 773
LweI GCATC 4 cut(s) 217, 271, 1357, 1369
MaeI CTAG 3 cut(s) 396, 1227, 1412
MaeII ACGT 1 cut(s) 1441
MaeIII GTNAC 1 cut(s) 1418
MalI GATC 4 cut(s) 258, 277, 528, 576
MboI GATC 4 cut(s) 256, 275, 526, 574
MfeI CAATTG 2 cut(s) 260, 981
MhlI GDGCHC 3 cut(s) 112, 403, 554
MlyI GAGTC 4 cut(s) 1215, 1237, 1418, 1474
MmeI TCCRAC 3 cut(s) 353, 456, 967
MseI TTAA 2 cut(s) 540, 750
MslI CAYNNNNRTG 4 cut(s) 222, 528, 570, 1444
MspA1I CMGCKG 3 cut(s) 268, 495, 1398
MspI CCGG 5 cut(s) 154, 195, 315, 922, 1002
MspR9I CCNGG 4 cut(s) 155, 195, 296, 923
MunI CAATTG 2 cut(s) 260, 981
MvaI CCWGG 1 cut(s) 296
MwoI GCNNNNNNNGC 3 cut(s) 116, 290, 1199
NciI CCSGG 3 cut(s) 155, 195, 923
NdeII GATC 4 cut(s) 256, 275, 526, 574
NlaIII CATG 3 cut(s) 221, 575, 1306
NlaIV GGNNCC 3 cut(s) 816, 1000, 1044
NmuCI GTSAC 1 cut(s) 1418
OliI CACNNNNGTG 2 cut(s) 528, 1444
PaeR7I CTCGAG 1 cut(s) 1278
PagI TCATGA 1 cut(s) 217
PaqCI CACCTGC 2 cut(s) 667, 1022
PfeI GAWTC 4 cut(s) 43, 185, 307, 1342
PfoI TCCNGGA 1 cut(s) 153
PkrI GCNGC 9 cut(s) 169, 267, 286, 347, 494, 633, 638, 688, 763
Ple19I CGATCG 1 cut(s) 529
PleI GAGTC 4 cut(s) 1215, 1237, 1418, 1473
PmaCI CACGTG 1 cut(s) 1442
PmlI CACGTG 1 cut(s) 1442
PpsI GAGTC 4 cut(s) 1215, 1237, 1418, 1473
Ppu21I YACGTR 1 cut(s) 1442
Psp6I CCWGG 1 cut(s) 294
PspCI CACGTG 1 cut(s) 1442
PspGI CCWGG 1 cut(s) 294
PspN4I GGNNCC 3 cut(s) 816, 1000, 1044
PspPI GGNCC 3 cut(s) 730, 989, 1111
PspXI VCTCGAGB 1 cut(s) 1278
PstNI CAGNNNCTG 1 cut(s) 188
PvuI CGATCG 1 cut(s) 529
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 6 cut(s) 51, 254, 970, 1410, 1492, 1526
RsaNI GTAC 6 cut(s) 50, 253, 969, 1409, 1491, 1525
RseI CAYNNNNRTG 4 cut(s) 222, 528, 570, 1444
SaqAI TTAA 2 cut(s) 540, 750
SatI GCNGC 9 cut(s) 168, 266, 285, 346, 493, 632, 637, 687, 762
Sau3AI GATC 4 cut(s) 256, 275, 526, 574
Sau96I GGNCC 3 cut(s) 730, 989, 1111
SchI GAGTC 4 cut(s) 1215, 1237, 1418, 1474
ScrFI CCNGG 4 cut(s) 155, 195, 296, 923
SduI GDGCHC 3 cut(s) 112, 403, 554
SfaNI GCATC 4 cut(s) 217, 271, 1357, 1369
Sfr274I CTCGAG 1 cut(s) 1278
SinI GGWCC 3 cut(s) 730, 989, 1111
SlaI CTCGAG 1 cut(s) 1278
SmiMI CAYNNNNRTG 4 cut(s) 222, 528, 570, 1444
SmlI CTYRAG 2 cut(s) 457, 1278
SmoI CTYRAG 2 cut(s) 457, 1278
SpeI ACTAGT 1 cut(s) 1411
SsiI CCGC 4 cut(s) 346, 493, 637, 1398
SspMI CTAG 3 cut(s) 396, 1227, 1412
StyD4I CCNGG 4 cut(s) 153, 193, 294, 921
TaaI ACNGT 3 cut(s) 547, 596, 1495
TaiI ACGT 1 cut(s) 1444
TaqI TCGA 4 cut(s) 63, 453, 843, 1279
TaqII GACCGA 1 cut(s) 747
TatI WGTACW 2 cut(s) 1408, 1524
TauI GCSGC 3 cut(s) 348, 495, 639
TfiI GAWTC 4 cut(s) 43, 185, 307, 1342
Tru1I TTAA 2 cut(s) 540, 750
Tru9I TTAA 2 cut(s) 540, 750
TscAI CASTG 3 cut(s) 370, 552, 1377
TseFI GTSAC 1 cut(s) 1418
TseI GCWGC 6 cut(s) 167, 265, 284, 631, 686, 761
Tsp45I GTSAC 1 cut(s) 1418
TspDTI ATGAA 9 cut(s) 150, 378, 450, 554, 1131, 1148, 1347, 1404, 1470
TspGWI ACGGA 1 cut(s) 1011
TspRI CASTG 3 cut(s) 370, 552, 1377
VneI GTGCAC 1 cut(s) 550
VpaK11BI GGWCC 3 cut(s) 730, 989, 1111
XapI RAATTY 8 cut(s) 178, 384, 601, 663, 740, 1391, 1470, 1502
XcmI CCANNNNNNNNNTGG 1 cut(s) 593
XhoI CTCGAG 1 cut(s) 1278
XmiI GTMKAC 2 cut(s) 11, 1010
XspI CTAG 3 cut(s) 396, 1227, 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.