Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002371

Physical Location & Seq

Genomic Coordinates Forward (+)

4548314 .. 4550916

Gene Structure 2603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00161910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGCAATGCTCTCTGATGTAGTTTCTGGTAGAAGCATATGCAAAGTTGGAGACCTATATCAAATAGGACTCCTAAACAAGTCAGGACAAATCGGCCCAAAGAAACAAGCCCAATTTTTATCGGGTATGAAATACATAAAAGAGAAACTGAGCGAGCAGAGAGGTTTTAGACAATTCGGGGAAAATTGCTCTGCCGGCCGTCGACCATTGAATTTTGGTGAAGCAGATACTGCTGCAATGGGAAAAAAGAAGACAGATGAAGCTGGTGCAACCAAGAAGGGTAAGTCAGCTGGAAAAGATGGGAAGAAATTGAAAGCACCAACAGTCTCCTCCATGTTGGCCAACATGGACCAGAAACCTGAAAATCCCAAGAATGCATCTTCCTCCAGTTCAAAGGCGAAAGGCGCTTCAAAACTTGCGTCCTATATTAATGATATTGATCTCCCTCCCTCTGAAGATGAGGTGGAAGAGGAACACCAACCCAATCAGCAAAGGAGGTCAGAGGCTAAGACGCTTGATATATCCATGACAGATAAAGAGTTAAAAAAGCGTGAAAAGAAGGACCTTCTTGCTGCCCATGCCGCCGAGCTATCAAAGAAGGAGGCCCTGAGAGATGACCATGATGCTTTCACTGTTGTTATTGGAAGCAGGGTTTCAGTACTTGAAGGTGAAGATGCAGATGCTAATATCAAGGATATATCAATAGAAAGTTTTTCTGTGGCGGCTAGAGGAAAGGAACTACTAAAGAATGCATCGGTGAAGGTATCTCATGGGAAGAGATATGGTCTGGTTGGTCCAAATGGGATGGGAAAGTCTACCCTCCTGAAGCTTCTCGCTTGGAGGAAGATTCCAGTACCCAAAAACATTGATGTTCTTTTAGTTGAACAAGAGGTAGTTGGTGATGATAGAAGTGCTCTTGAAGCAGTTGTTTCAGCTAATGAACAACTTGTTAAGCTCCGGGAAGAGGTTGCGGCATTGCAAAATTCAGAGGAAGAGGACAGTCATGATGATGATGATGATGAAGGAGAGAAGCTTGCTGAGTTGTACGATCAATTGCAGCTGATGGGATCGGATGCTGCTGAAGCCCAGGCTTCAAAGATTCTTGCCGGTTTGGGCTTTACAGAGGATATGCAAGTCCGTCCTACAAAGTCATTTAGTGGTGGTTGGAGAATGAGAATTTCATTAGCTAGGGCACTTTTTGTGCAACCAACTCTTTTGTTGCTTGATGAACCAACAAACCATCTCGACTTGAGGGCTGTTCTTTGGTTGGAGGAGTACTTGTGCCGCTGGAAAAAAACTTTGGTGGTTGTCTCACATGATCGTGATTTCCTTAACACAGTGTGCACAGAGATTATTCATCTGCATGATCTGAAGCTCCACCACTACCGTGGAAATTTTGATGATTTTGTAAAAGGGTATGAGCAGCGCCGCAAAGAGGTAAACAAAACGTTTGAGATTTATGATAAGCAGAAGAAAGCTGCCAGAAGGAGCGGAAGTCGGGTTCAACAGGAGAAGGTCAAGGACCGAGCAAAGTTGTTAGTTACTAAGGGCAAAGGAAAGGTTGACGAGGATGACACCCAAGTTGAGGCTCCTAAGAAGTGGAGGGATTACAGTGTGGAGTTCCACTTTCCTGAACCTACTGAGCTTACACCTCCACTCTTGCAACTTATTGATGTCAGTTTCAGTTATCCGAACCGGGAAGATTTCAGGCTGTCTGATGTTGATGTCGGTATTGATATGGGTACTCGTGTTGCCATTGTTGGACCTAATGGAGCCGGAAAGTCTACTCTGCTCAACCTTCTTGCGGGTGATTTGGTTCCTACTGAGGGTGAAGTTAGGAGGAGTCAGAAGTTGAGGATTGGCAGGTATTCACAGCACTTTGTGGACCTCCTGACAATGGACGAAACCCCAGTTTCATACCTTCTTCGTCTTCATCCTGACCAAGAGGGATTTAGCAAGCAGGAGGCTGTGCGTGCAAAACTTGGAAAGTACGGACTCCCTAGCCATAACCATCTGACTCCTATTGCAAAATTATCCGGGGGACAGAAAGCTCGAGTTGTCTTCACATCAATATCCATGTCAAAACCCCACATTCTGCTTTTGGATGAACCGACGAATCATCTAGATATGCAGAGCATTGATGCACTGGCTGATGCACTTGATGAATTCACCGGTGGGGTTGTACTGGTCAGTCATGACTCTAGACTTATATCAAGTGTGTGCAAGGATGAAGAGAAGAGTCAAATTTGGATTGTTGAAGATGGTACTGTGGTGAAATTTGATGGAAGTTTTAACGAGTACAAGGAGGAGCTACAAAAAGAAATTAGAGCTGAGGTTGATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

781

Amino Acids

86.99

Weight (kDa)

6.04

Isoelectric Point (pI)

36.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	248 - 413	6.8e-26	ABC transporter
ABC_tran	PF00005	571 - 706	1e-23	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54540 AT3G54540
fragaria_vesca	FvH4_2g35540 FvH4_6g37180 FvH4_6g37180 FvH4_6g37180 FvH4_6g37180
malus_domestica	MD00G1070400.v1.1 MD05G1058200.v1.1 MD05G1058300.v1.1 MD05G1058400.v1.1 MD17G1277800.v1.1
prunus_persica	Prupe.1G200300_v2.0.a1
pyrus_communis	pycom15g13030
rosa_chinensis	RchiOBHm_Chr2g0149831 RchiOBHm_Chr6g0306241
rosa_laevigata	RLG00000010810 RLG00000020449
rosa_multiflora	Rmu_co8244641.1_g000001 Rmu_co8465215.1_g000001 Rmu_sc0003594.1_g000001 Rmu_ssc0000308.1_g000036
rosa_roxburghii	Rroxscaffold_2G00097640 Rroxscaffold_7G00161910
rosa_rugosa	Rorug02G0416800 Rorug02G0416900 Rorug06G0348300
rosa_samantha	Rh1AG115800 Rh1AG115900 Rh1CG111300 Rh1CG111400 Rh1DG120100 Rh1DG120200 Rh2AG475900 Rh2BG487600 Rh2CG461400 Rh2DG496400 Rh6AG460800 Rh6BG440300 Rh6DG461200
rosa_wichuraiana	Rw2G038810 Rw6G040140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1854
AccBSI	CCGCTC	1 cut(s)	1491
AccI	GTMKAC	3 cut(s)	202, 815, 1784
AciI	CCGC	7 cut(s)	582, 722, 971, 1285, 1429, 1491, 1805
AclI	AACGTT	1 cut(s)	1448
AclWI	GGATC	1 cut(s)	1075
AcoI	YGGCCR	2 cut(s)	196, 339
AcsI	RAATTY	7 cut(s)	211, 982, 1176, 1393, 2165, 2244, 2276
AcuI	CTGAAG	4 cut(s)	474, 845, 1101, 1391
AdeI	CACNNNGTG	2 cut(s)	1341, 1882
AfaI	GTAC	9 cut(s)	660, 855, 1046, 1277, 1744, 1991, 2184, 2266, 2300
AfiI	CCNNNNNNNGG	6 cut(s)	964, 1435, 1585, 1804, 1826, 1897
AgeI	ACCGGT	1 cut(s)	2171
AjnI	CCWGG	1 cut(s)	1086
AjuI	GAANNNNNNNTTGG	2 cut(s)	1283, 1315
AleI	CACNNNNGTG	1 cut(s)	1386
AloI	GAACNNNNNNTCC	2 cut(s)	1485, 1517
Alw21I	GWGCWC	2 cut(s)	916, 1346
Alw26I	GTCTC	3 cut(s)	45, 331, 1315
Alw44I	GTGCAC	1 cut(s)	1342
AlwI	GGATC	1 cut(s)	1075
AlwNI	CAGNNNCTG	1 cut(s)	230
Ama87I	CYCGRG	1 cut(s)	2052
AoxI	GGCC	4 cut(s)	94, 196, 339, 603
ApaLI	GTGCAC	1 cut(s)	1342
ApeKI	GCWGC	6 cut(s)	233, 572, 1057, 1076, 1423, 1478
ApoI	RAATTY	7 cut(s)	211, 982, 1176, 1393, 2165, 2244, 2276
ArsI	GACNNNNNNTTYG	2 cut(s)	404, 436
AseI	ATTAAT	1 cut(s)	429
AsiGI	ACCGGT	1 cut(s)	2171
AspLEI	GCGC	2 cut(s)	407, 1428
AspS9I	GGNCC	8 cut(s)	95, 349, 562, 604, 794, 1522, 1763, 1885
AsuC2I	CCSGG	3 cut(s)	959, 1697, 2038
AsuHPI	GGTGA	8 cut(s)	230, 680, 769, 911, 1820, 1841, 2161, 2284
AvaI	CYCGRG	1 cut(s)	2052
AvaII	GGWCC	6 cut(s)	349, 562, 794, 1522, 1763, 1885
BaeGI	GKGCMC	2 cut(s)	1195, 1346
BaeI	ACNNNNGTAYC	4 cut(s)	1734, 1767, 2256, 2289
BalI	TGGCCA	1 cut(s)	341
BauI	CACGAG	1 cut(s)	1746
BbsI	GAAGAC	3 cut(s)	257, 1922, 2053
Bbv12I	GWGCWC	2 cut(s)	916, 1346
BbvCI	CCTCAGC	1 cut(s)	2331
BbvI	GCAGC	6 cut(s)	220, 559, 1063, 1069, 1435, 1465
BccI	CCATC	7 cut(s)	293, 799, 1057, 1248, 2019, 2255, 2276
BceAI	ACGGC	1 cut(s)	183
BciT130I	CCWGG	1 cut(s)	1088
BcnI	CCSGG	3 cut(s)	959, 1697, 2038
BcoDI	GTCTC	3 cut(s)	45, 331, 1315
BfaI	CTAG	5 cut(s)	726, 1188, 2001, 2123, 2202
BfoI	RGCGCY	2 cut(s)	408, 1429
BfuAI	ACCTGC	1 cut(s)	1854
BmcAI	AGTACT	2 cut(s)	660, 1277
Bme1390I	CCNGG	4 cut(s)	959, 1088, 1697, 2038
Bme18I	GGWCC	6 cut(s)	349, 562, 794, 1522, 1763, 1885
BmeT110I	CYCGRG	1 cut(s)	2052
BmgT120I	GGNCC	8 cut(s)	95, 349, 562, 604, 794, 1522, 1763, 1885
BmiI	GGNNCC	3 cut(s)	1590, 1774, 1818
BmrFI	CCNGG	4 cut(s)	959, 1088, 1697, 2038
BmrI	ACTGGG	1 cut(s)	1904
BmsI	GCATC	8 cut(s)	386, 613, 664, 670, 761, 1063, 2131, 2143
BmuI	ACTGGG	1 cut(s)	1904
BpiI	GAAGAC	3 cut(s)	257, 1922, 2053
BpmI	CTGGAG	1 cut(s)	370
Bpu10I	CCTNAGC	1 cut(s)	2331
BpuEI	CTTGAG	1 cut(s)	1270
BpuMI	CCSGG	3 cut(s)	959, 1697, 2038
BsaBI	GATNNNNATC	1 cut(s)	438
BsaI	GGTCTC	1 cut(s)	45
BsaJI	CCNNGG	3 cut(s)	1086, 1387, 2037
BsaWI	WCCGGW	1 cut(s)	2171
BsaXI	ACNNNNNCTCC	4 cut(s)	1265, 1295, 1480, 1510
Bsc4I	CCNNNNNNNGG	6 cut(s)	964, 1435, 1585, 1804, 1826, 1897
Bse118I	RCCGGY	3 cut(s)	194, 1106, 2171
Bse1I	ACTGG	5 cut(s)	387, 851, 1910, 2151, 2190
Bse3DI	GCAATG	3 cut(s)	12, 243, 974
Bse8I	GATNNNNATC	1 cut(s)	438
BseBI	CCWGG	1 cut(s)	1088
BseDI	CCNNGG	3 cut(s)	1086, 1387, 2037
BseGI	GGATG	6 cut(s)	810, 1078, 1576, 1933, 2110, 2233
BseJI	GATNNNNATC	1 cut(s)	438
BseLI	CCNNNNNNNGG	6 cut(s)	964, 1435, 1585, 1804, 1826, 1897
BseMI	GCAATG	3 cut(s)	12, 243, 974
BseMII	CTCAG	6 cut(s)	140, 599, 1029, 1632, 1815, 2322
BseNI	ACTGG	5 cut(s)	387, 851, 1910, 2151, 2190
BseRI	GAGGAG	4 cut(s)	319, 1286, 1855, 2321
BseSI	GKGCMC	2 cut(s)	1195, 1346
BseX3I	CGGCCG	1 cut(s)	196
BseXI	GCAGC	6 cut(s)	220, 559, 1063, 1069, 1435, 1465
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	4 cut(s)	96, 198, 341, 605
BshTI	ACCGGT	1 cut(s)	2171
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	2 cut(s)	916, 1346
BsiHKCI	CYCGRG	1 cut(s)	2052
BsiSI	CCGG	7 cut(s)	195, 958, 1107, 1696, 1776, 2037, 2172
BslFI	GGGAC	1 cut(s)	2055
BslI	CCNNNNNNNGG	6 cut(s)	964, 1435, 1585, 1804, 1826, 1897
BsmAI	GTCTC	3 cut(s)	45, 331, 1315
BsmFI	GGGAC	1 cut(s)	2055
BsmI	GAATGC	2 cut(s)	379, 754
BsnI	GGCC	4 cut(s)	96, 198, 341, 605
Bso31I	GGTCTC	1 cut(s)	45
BsoBI	CYCGRG	1 cut(s)	2052
Bsp1286I	GDGCHC	3 cut(s)	916, 1195, 1346
Bsp143I	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
BspACI	CCGC	7 cut(s)	582, 722, 971, 1285, 1429, 1491, 1805
BspANI	GGCC	4 cut(s)	96, 198, 341, 605
BspCNI	CTCAG	6 cut(s)	141, 600, 1030, 1633, 1816, 2323
BspHI	TCATGA	2 cut(s)	1003, 2194
BspLI	GGNNCC	3 cut(s)	1590, 1774, 1818
BspMI	ACCTGC	1 cut(s)	1854
BspPI	GGATC	1 cut(s)	1075
BspTNI	GGTCTC	1 cut(s)	45
BsrBI	CCGCTC	1 cut(s)	1491
BsrDI	GCAATG	3 cut(s)	12, 243, 974
BsrFI	RCCGGY	3 cut(s)	194, 1106, 2171
BsrI	ACTGG	5 cut(s)	387, 851, 1910, 2151, 2190
BssAI	RCCGGY	3 cut(s)	194, 1106, 2171
BssECI	CCNNGG	3 cut(s)	1086, 1387, 2037
BssMI	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
BssSI	CACGAG	1 cut(s)	1746
Bst2BI	CACGAG	1 cut(s)	1746
Bst2UI	CCWGG	1 cut(s)	1088
Bst4CI	ACNGT	7 cut(s)	325, 634, 1001, 1339, 1388, 1613, 2269
Bst6I	CTCTTC	6 cut(s)	462, 770, 957, 987, 2226, 2231
BstAPI	GCANNNNNTGC	1 cut(s)	230
BstC8I	GCNNGC	5 cut(s)	155, 196, 1035, 1958, 1974
BstDEI	CTNAG	9 cut(s)	149, 507, 608, 1038, 1545, 1593, 1641, 1824, 2331
BstDSI	CCRYGG	1 cut(s)	1387
BstF5I	GGATG	6 cut(s)	810, 1078, 1576, 1933, 2110, 2233
BstH2I	RGCGCY	2 cut(s)	408, 1429
BstHHI	GCGC	2 cut(s)	407, 1428
BstKTI	GATC	5 cut(s)	442, 1051, 1070, 1321, 1369
BstMAI	GTCTC	3 cut(s)	45, 331, 1315
BstMBI	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
BstMCI	CGRYCG	1 cut(s)	199
BstMWI	GCNNNNNNNGC	8 cut(s)	195, 230, 404, 578, 581, 920, 1082, 1973
BstNI	CCWGG	1 cut(s)	1088
BstSCI	CCNGG	4 cut(s)	957, 1086, 1695, 2036
BstSLI	GKGCMC	2 cut(s)	1195, 1346
BstV1I	GCAGC	6 cut(s)	220, 559, 1063, 1069, 1435, 1465
BstV2I	GAAGAC	3 cut(s)	257, 1922, 2053
BstXI	CCANNNNNNTGG	1 cut(s)	1388
BstZI	CGGCCG	1 cut(s)	196
BsuRI	GGCC	4 cut(s)	96, 198, 341, 605
BtgI	CCRYGG	1 cut(s)	1387
BtsCI	GGATG	6 cut(s)	810, 1078, 1576, 1933, 2110, 2233
BtsIMutI	CAGTG	4 cut(s)	630, 1344, 1618, 2144
BveI	ACCTGC	1 cut(s)	1854
Cac8I	GCNNGC	5 cut(s)	155, 196, 1035, 1958, 1974
CaiI	CAGNNNCTG	1 cut(s)	230
CciI	TCATGA	2 cut(s)	1003, 2194
CfoI	GCGC	2 cut(s)	407, 1428
Cfr10I	RCCGGY	3 cut(s)	194, 1106, 2171
Cfr13I	GGNCC	8 cut(s)	95, 349, 562, 604, 794, 1522, 1763, 1885
CseI	GACGC	2 cut(s)	408, 520
Csp6I	GTAC	9 cut(s)	659, 854, 1045, 1276, 1743, 1990, 2183, 2265, 2299
CspAI	ACCGGT	1 cut(s)	2171
CviQI	GTAC	9 cut(s)	659, 854, 1045, 1276, 1743, 1990, 2183, 2265, 2299
DdeI	CTNAG	9 cut(s)	149, 507, 608, 1038, 1545, 1593, 1641, 1824, 2331
DpnI	GATC	5 cut(s)	441, 1050, 1069, 1320, 1368
DpnII	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
DraIII	CACNNNGTG	2 cut(s)	1341, 1882
EaeI	YGGCCR	2 cut(s)	196, 339
EagI	CGGCCG	1 cut(s)	196
Eam1104I	CTCTTC	6 cut(s)	462, 770, 957, 987, 2226, 2231
EarI	CTCTTC	6 cut(s)	462, 770, 957, 987, 2226, 2231
EclXI	CGGCCG	1 cut(s)	196
Eco31I	GGTCTC	1 cut(s)	45
Eco47I	GGWCC	6 cut(s)	349, 562, 794, 1522, 1763, 1885
Eco52I	CGGCCG	1 cut(s)	196
Eco57I	CTGAAG	4 cut(s)	474, 845, 1101, 1391
Eco88I	CYCGRG	1 cut(s)	2052
EcoO109I	RGGNCCY	2 cut(s)	562, 604
EcoRI	GAATTC	1 cut(s)	2165
EcoRII	CCWGG	1 cut(s)	1086
EcoT22I	ATGCAT	2 cut(s)	379, 754
FaqI	GGGAC	1 cut(s)	2055
FauI	CCCGC	1 cut(s)	1798
FauNDI	CATATG	1 cut(s)	38
FblI	GTMKAC	3 cut(s)	202, 815, 1784
FokI	GGATG	6 cut(s)	817, 1085, 1583, 1920, 2117, 2240
FspBI	CTAG	5 cut(s)	726, 1188, 2001, 2123, 2202
GlaI	GCGC	2 cut(s)	406, 1427
GsuI	CTGGAG	1 cut(s)	370
HaeII	RGCGCY	2 cut(s)	408, 1429
HaeIII	GGCC	4 cut(s)	96, 198, 341, 605
HapII	CCGG	7 cut(s)	195, 958, 1107, 1696, 1776, 2037, 2172
HgaI	GACGC	2 cut(s)	408, 520
HhaI	GCGC	2 cut(s)	407, 1428
Hin6I	GCGC	2 cut(s)	405, 1426
HinP1I	GCGC	2 cut(s)	405, 1426
HincII	GTYRAC	2 cut(s)	203, 1564
HindII	GTYRAC	2 cut(s)	203, 1564
HindIII	AAGCTT	2 cut(s)	827, 1031
HinfI	GANTC	9 cut(s)	69, 847, 1099, 1843, 1995, 2017, 2116, 2198, 2239
HpaII	CCGG	7 cut(s)	195, 958, 1107, 1696, 1776, 2037, 2172
HphI	GGTGA	8 cut(s)	230, 680, 769, 911, 1820, 1841, 2161, 2284
Hpy166II	GTNNAC	7 cut(s)	203, 816, 1344, 1441, 1564, 1785, 1885
Hpy8I	GTNNAC	7 cut(s)	203, 816, 1344, 1441, 1564, 1785, 1885
Hpy99I	CGWCG	2 cut(s)	204, 2116
HpyCH4III	ACNGT	7 cut(s)	325, 634, 1001, 1339, 1388, 1613, 2269
HpyCH4IV	ACGT	1 cut(s)	1448
HpyF10VI	GCNNNNNNNGC	8 cut(s)	195, 230, 404, 578, 581, 920, 1082, 1973
HpyF3I	CTNAG	9 cut(s)	149, 507, 608, 1038, 1545, 1593, 1641, 1824, 2331
HpySE526I	ACGT	1 cut(s)	1448
HspAI	GCGC	2 cut(s)	405, 1426
KroI	GCCGGC	1 cut(s)	194
KroNI	GCCGGC	1 cut(s)	196
Kzo9I	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
LmnI	GCTCC	6 cut(s)	960, 1380, 1488, 1594, 1772, 2308
Lsp1109I	GCAGC	6 cut(s)	220, 559, 1063, 1069, 1435, 1465
LweI	GCATC	8 cut(s)	386, 613, 664, 670, 761, 1063, 2131, 2143
MaeI	CTAG	5 cut(s)	726, 1188, 2001, 2123, 2202
MaeII	ACGT	1 cut(s)	1448
MaeIII	GTNAC	1 cut(s)	1540
MalI	GATC	5 cut(s)	441, 1050, 1069, 1320, 1368
MbiI	CCGCTC	1 cut(s)	1491
MboI	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
MfeI	CAATTG	1 cut(s)	1052
MhlI	GDGCHC	3 cut(s)	916, 1195, 1346
MlsI	TGGCCA	1 cut(s)	341
MluNI	TGGCCA	1 cut(s)	341
MlyI	GAGTC	6 cut(s)	63, 1852, 1989, 2011, 2192, 2248
MmeI	TCCRAC	4 cut(s)	28, 1145, 1248, 1741
Mox20I	TGGCCA	1 cut(s)	341
Mph1103I	ATGCAT	2 cut(s)	379, 754
MroNI	GCCGGC	1 cut(s)	194
MscI	TGGCCA	1 cut(s)	341
MseI	TTAA	5 cut(s)	429, 542, 951, 1332, 2292
MslI	CAYNNNNRTG	4 cut(s)	1008, 1320, 1362, 1386
Msp20I	TGGCCA	1 cut(s)	341
MspA1I	CMGCKG	3 cut(s)	290, 1060, 1287
MspI	CCGG	7 cut(s)	195, 958, 1107, 1696, 1776, 2037, 2172
MspR9I	CCNGG	4 cut(s)	959, 1088, 1697, 2038
MunI	CAATTG	1 cut(s)	1052
Mva1269I	GAATGC	2 cut(s)	379, 754
MvaI	CCWGG	1 cut(s)	1088
MwoI	GCNNNNNNNGC	8 cut(s)	195, 230, 404, 578, 581, 920, 1082, 1973
NaeI	GCCGGC	1 cut(s)	196
NciI	CCSGG	3 cut(s)	959, 1697, 2038
NdeI	CATATG	1 cut(s)	38
NdeII	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
NgoMIV	GCCGGC	1 cut(s)	194
NlaIV	GGNNCC	3 cut(s)	1590, 1774, 1818
NmeAIII	GCCGAG	1 cut(s)	610
NsiI	ATGCAT	2 cut(s)	379, 754
OliI	CACNNNNGTG	1 cut(s)	1386
PaeR7I	CTCGAG	1 cut(s)	2052
PagI	TCATGA	2 cut(s)	1003, 2194
PctI	GAATGC	2 cut(s)	379, 754
PdiI	GCCGGC	1 cut(s)	196
PfeI	GAWTC	3 cut(s)	847, 1099, 2116
PfoI	TCCNGGA	1 cut(s)	957
PinAI	ACCGGT	1 cut(s)	2171
PleI	GAGTC	6 cut(s)	63, 1851, 1989, 2011, 2192, 2247
PpsI	GAGTC	6 cut(s)	63, 1851, 1989, 2011, 2192, 2247
PpuMI	RGGWCCY	1 cut(s)	562
PshBI	ATTAAT	1 cut(s)	429
Psp1406I	AACGTT	1 cut(s)	1448
Psp5II	RGGWCCY	1 cut(s)	562
Psp6I	CCWGG	1 cut(s)	1086
PspGI	CCWGG	1 cut(s)	1086
PspN4I	GGNNCC	3 cut(s)	1590, 1774, 1818
PspPI	GGNCC	8 cut(s)	95, 349, 562, 604, 794, 1522, 1763, 1885
PspPPI	RGGWCCY	1 cut(s)	562
PspXI	VCTCGAGB	1 cut(s)	2052
PstNI	CAGNNNCTG	1 cut(s)	230
PvuII	CAGCTG	2 cut(s)	290, 1060
RsaI	GTAC	9 cut(s)	660, 855, 1046, 1277, 1744, 1991, 2184, 2266, 2300
RsaNI	GTAC	9 cut(s)	659, 854, 1045, 1276, 1743, 1990, 2183, 2265, 2299
RseI	CAYNNNNRTG	4 cut(s)	1008, 1320, 1362, 1386
SalI	GTCGAC	1 cut(s)	201
SaqAI	TTAA	5 cut(s)	429, 542, 951, 1332, 2292
Sau3AI	GATC	5 cut(s)	439, 1048, 1067, 1318, 1366
Sau96I	GGNCC	8 cut(s)	95, 349, 562, 604, 794, 1522, 1763, 1885
ScaI	AGTACT	2 cut(s)	660, 1277
SchI	GAGTC	6 cut(s)	63, 1852, 1989, 2011, 2192, 2248
ScrFI	CCNGG	4 cut(s)	959, 1088, 1697, 2038
SduI	GDGCHC	3 cut(s)	916, 1195, 1346
SfaNI	GCATC	8 cut(s)	386, 613, 664, 670, 761, 1063, 2131, 2143
Sfr274I	CTCGAG	1 cut(s)	2052
SgrAI	CRCCGGYG	1 cut(s)	2171
SinI	GGWCC	6 cut(s)	349, 562, 794, 1522, 1763, 1885
SlaI	CTCGAG	1 cut(s)	2052
SmiMI	CAYNNNNRTG	4 cut(s)	1008, 1320, 1362, 1386
SmlI	CTYRAG	2 cut(s)	1249, 2052
SmoI	CTYRAG	2 cut(s)	1249, 2052
SsiI	CCGC	7 cut(s)	582, 722, 971, 1285, 1429, 1491, 1805
SspMI	CTAG	5 cut(s)	726, 1188, 2001, 2123, 2202
StyD4I	CCNGG	4 cut(s)	957, 1086, 1695, 2036
TaaI	ACNGT	7 cut(s)	325, 634, 1001, 1339, 1388, 1613, 2269
TaiI	ACGT	1 cut(s)	1451
TaqI	TCGA	3 cut(s)	202, 1245, 2053
TaqII	GACCGA	1 cut(s)	1539
TatI	WGTACW	4 cut(s)	658, 1275, 2182, 2298
TauI	GCSGC	5 cut(s)	584, 725, 974, 1287, 1431
TfiI	GAWTC	3 cut(s)	847, 1099, 2116
Tru1I	TTAA	5 cut(s)	429, 542, 951, 1332, 2292
Tru9I	TTAA	5 cut(s)	429, 542, 951, 1332, 2292
TscAI	CASTG	4 cut(s)	637, 1344, 1618, 2151
TseI	GCWGC	6 cut(s)	233, 572, 1057, 1076, 1423, 1478
TspGWI	ACGGA	2 cut(s)	1127, 2007
TspRI	CASTG	4 cut(s)	637, 1344, 1618, 2151
VneI	GTGCAC	1 cut(s)	1342
VpaK11BI	GGWCC	6 cut(s)	349, 562, 794, 1522, 1763, 1885
VspI	ATTAAT	1 cut(s)	429
XapI	RAATTY	7 cut(s)	211, 982, 1176, 1393, 2165, 2244, 2276
XbaI	TCTAGA	2 cut(s)	2122, 2201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1385
XhoI	CTCGAG	1 cut(s)	2052
XmiI	GTMKAC	3 cut(s)	202, 815, 1784
XspI	CTAG	5 cut(s)	726, 1188, 2001, 2123, 2202
ZrmI	AGTACT	2 cut(s)	660, 1277
Zsp2I	ATGCAT	2 cut(s)	379, 754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.