ABC transporter F family member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54540 AT3G54540 |
| fragaria_vesca | FvH4_2g35540 FvH4_6g37180 FvH4_6g37180 FvH4_6g37180 FvH4_6g37180 |
| malus_domestica | MD00G1070400.v1.1 MD05G1058200.v1.1 MD05G1058300.v1.1 MD05G1058400.v1.1 MD17G1277800.v1.1 |
| prunus_persica | Prupe.1G200300_v2.0.a1 |
| pyrus_communis | pycom15g13030 |
| rosa_chinensis | RchiOBHm_Chr2g0149831 RchiOBHm_Chr6g0306241 |
| rosa_laevigata | RLG00000010810 RLG00000020449 |
| rosa_multiflora | Rmu_co8244641.1_g000001 Rmu_co8465215.1_g000001 Rmu_sc0003594.1_g000001 Rmu_ssc0000308.1_g000036 |
| rosa_roxburghii | Rroxscaffold_2G00097640 Rroxscaffold_7G00161910 |
| rosa_rugosa | Rorug02G0416800 Rorug02G0416900 Rorug06G0348300 |
| rosa_samantha | Rh1AG115800 Rh1AG115900 Rh1CG111300 Rh1CG111400 Rh1DG120100 Rh1DG120200 Rh2AG475900 Rh2BG487600 Rh2CG461400 Rh2DG496400 Rh6AG460800 Rh6BG440300 Rh6DG461200 |
| rosa_wichuraiana | Rw2G038810 Rw6G040140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 34, 292, 299 |
| AcuI | CTGAAG | 1 cut(s) | 210 |
| AfaI | GTAC | 1 cut(s) | 231 |
| AgsI | TTSAA | 1 cut(s) | 236 |
| AluBI | AGCT | 1 cut(s) | 163 |
| AluI | AGCT | 1 cut(s) | 163 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 2 cut(s) | 146, 155 |
| AspS9I | GGNCC | 2 cut(s) | 136, 175 |
| AsuHPI | GGTGA | 1 cut(s) | 251 |
| AvaII | GGWCC | 1 cut(s) | 136 |
| BbvI | GCAGC | 2 cut(s) | 133, 142 |
| BclI | TGATCA | 1 cut(s) | 187 |
| BisI | GCNGC | 3 cut(s) | 147, 156, 293 |
| BlpI | GCTNAGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 3 cut(s) | 148, 157, 294 |
| BmcAI | AGTACT | 1 cut(s) | 231 |
| Bme18I | GGWCC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 2 cut(s) | 136, 175 |
| BmsI | GCATC | 3 cut(s) | 184, 235, 241 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 159 |
| Bsa29I | ATCGAT | 1 cut(s) | 8 |
| BseCI | ATCGAT | 1 cut(s) | 8 |
| BseMII | CTCAG | 1 cut(s) | 150 |
| BseXI | GCAGC | 2 cut(s) | 133, 142 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BshVI | ATCGAT | 1 cut(s) | 8 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp143I | GATC | 2 cut(s) | 9, 187 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 159 |
| BspACI | CCGC | 3 cut(s) | 34, 292, 299 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 151 |
| BspDI | ATCGAT | 1 cut(s) | 8 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BssMI | GATC | 2 cut(s) | 9, 187 |
| Bst4CI | ACNGT | 1 cut(s) | 205 |
| Bst6I | CTCTTC | 1 cut(s) | 32 |
| BstC8I | GCNNGC | 1 cut(s) | 297 |
| BstDEI | CTNAG | 2 cut(s) | 77, 159 |
| BstKTI | GATC | 2 cut(s) | 12, 190 |
| BstMBI | GATC | 2 cut(s) | 9, 187 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 155 |
| BstV1I | GCAGC | 2 cut(s) | 133, 142 |
| Bsu15I | ATCGAT | 1 cut(s) | 8 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BsuTUI | ATCGAT | 1 cut(s) | 8 |
| Cac8I | GCNNGC | 1 cut(s) | 297 |
| CciI | TCATGA | 1 cut(s) | 190 |
| Cfr13I | GGNCC | 2 cut(s) | 136, 175 |
| ClaI | ATCGAT | 1 cut(s) | 8 |
| CseI | GACGC | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 230 |
| CviAII | CATG | 2 cut(s) | 152, 191 |
| CviJI | RGCY | 5 cut(s) | 76, 163, 176, 224, 295 |
| CviKI_1 | RGCY | 5 cut(s) | 76, 163, 176, 224, 295 |
| CviQI | GTAC | 1 cut(s) | 230 |
| DdeI | CTNAG | 2 cut(s) | 77, 159 |
| DpnI | GATC | 2 cut(s) | 11, 189 |
| DpnII | GATC | 2 cut(s) | 9, 187 |
| Eam1104I | CTCTTC | 1 cut(s) | 32 |
| EarI | CTCTTC | 1 cut(s) | 32 |
| EciI | GGCGGA | 1 cut(s) | 49 |
| Eco47I | GGWCC | 1 cut(s) | 136 |
| Eco57I | CTGAAG | 1 cut(s) | 210 |
| EcoO109I | RGGNCCY | 2 cut(s) | 136, 175 |
| FaeI | CATG | 2 cut(s) | 155, 194 |
| FaiI | YATR | 4 cut(s) | 91, 153, 192, 269 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 208, 240 |
| FatI | CATG | 2 cut(s) | 151, 190 |
| FauI | CCCGC | 1 cut(s) | 292 |
| FbaI | TGATCA | 1 cut(s) | 187 |
| Fnu4HI | GCNGC | 3 cut(s) | 147, 156, 293 |
| Fsp4HI | GCNGC | 3 cut(s) | 147, 156, 293 |
| GluI | GCNGC | 3 cut(s) | 147, 156, 293 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HgaI | GACGC | 1 cut(s) | 90 |
| Hin1II | CATG | 2 cut(s) | 155, 194 |
| HphI | GGTGA | 1 cut(s) | 251 |
| Hpy188I | TCNGA | 2 cut(s) | 24, 72 |
| Hpy188III | TCNNGA | 1 cut(s) | 191 |
| HpyAV | CCTTC | 4 cut(s) | 127, 149, 230, 297 |
| HpyCH4III | ACNGT | 1 cut(s) | 205 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 1 cut(s) | 248 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 155 |
| HpyF3I | CTNAG | 2 cut(s) | 77, 159 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 2 cut(s) | 155, 194 |
| Ksp22I | TGATCA | 1 cut(s) | 187 |
| Kzo9I | GATC | 2 cut(s) | 9, 187 |
| LpnPI | CCDG | 3 cut(s) | 191, 205, 281 |
| Lsp1109I | GCAGC | 2 cut(s) | 133, 142 |
| LweI | GCATC | 3 cut(s) | 184, 235, 241 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MalI | GATC | 2 cut(s) | 11, 189 |
| MboI | GATC | 2 cut(s) | 9, 187 |
| MboII | GAAGA | 2 cut(s) | 49, 254 |
| MnlI | CCTC | 7 cut(s) | 24, 26, 30, 33, 59, 66, 166 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 155 |
| NdeII | GATC | 2 cut(s) | 9, 187 |
| NlaIII | CATG | 2 cut(s) | 155, 194 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PkrI | GCNGC | 3 cut(s) | 148, 157, 294 |
| PpuMI | RGGWCCY | 1 cut(s) | 136 |
| Psp5II | RGGWCCY | 1 cut(s) | 136 |
| PspPI | GGNCC | 2 cut(s) | 136, 175 |
| PspPPI | RGGWCCY | 1 cut(s) | 136 |
| RsaI | GTAC | 1 cut(s) | 231 |
| RsaNI | GTAC | 1 cut(s) | 230 |
| SatI | GCNGC | 3 cut(s) | 147, 156, 293 |
| Sau3AI | GATC | 2 cut(s) | 9, 187 |
| Sau96I | GGNCC | 2 cut(s) | 136, 175 |
| ScaI | AGTACT | 1 cut(s) | 231 |
| SetI | ASST | 5 cut(s) | 70, 127, 141, 165, 241 |
| SfaNI | GCATC | 3 cut(s) | 184, 235, 241 |
| SinI | GGWCC | 1 cut(s) | 136 |
| SsiI | CCGC | 3 cut(s) | 34, 292, 299 |
| TaaI | ACNGT | 1 cut(s) | 205 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TaqI | TCGA | 1 cut(s) | 8 |
| TatI | WGTACW | 1 cut(s) | 229 |
| TauI | GCSGC | 1 cut(s) | 295 |
| TseI | GCWGC | 2 cut(s) | 146, 155 |
| VpaK11BI | GGWCC | 1 cut(s) | 136 |
| ZrmI | AGTACT | 1 cut(s) | 231 |