kDa chaperonin
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44650 AT3G60210 |
| fragaria_vesca | FvH4_7g08830 |
| malus_domestica | MD00G1150500.v1.1 MD02G1223400.v1.1 MD07G1091300.v1.1 MD13G1240800.v1.1 |
| prunus_persica | Prupe.2G116500_v2.0.a1 |
| pyrus_communis | pycom02g19040 pycom07g07460 |
| rosa_chinensis | RchiOBHm_Chr1g0344251 |
| rosa_multiflora | Rmu_sc0000019.1_g000007 Rmu_sc0014172.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00309980 |
| rosa_rugosa | Rorug01G0172400 Rorug01G0172500 |
| rosa_samantha | Rh1AG188400 Rh1BG154800 Rh1CG174200 Rh1DG186900 |
| rosa_wichuraiana | Rw1G015520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 129 |
| AccBSI | CCGCTC | 1 cut(s) | 244 |
| AccI | GTMKAC | 1 cut(s) | 361 |
| AciI | CCGC | 1 cut(s) | 244 |
| AcsI | RAATTY | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 83, 129 |
| AgsI | TTSAA | 1 cut(s) | 404 |
| AleI | CACNNNNGTG | 1 cut(s) | 143 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 294, 326 |
| AluBI | AGCT | 3 cut(s) | 158, 187, 203 |
| AluI | AGCT | 3 cut(s) | 158, 187, 203 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 184, 217 |
| ApoI | RAATTY | 1 cut(s) | 236 |
| AsuC2I | CCSGG | 1 cut(s) | 191 |
| BbvI | GCAGC | 2 cut(s) | 196, 204 |
| BceAI | ACGGC | 2 cut(s) | 215, 380 |
| BcnI | CCSGG | 1 cut(s) | 191 |
| BisI | GCNGC | 2 cut(s) | 185, 218 |
| BlsI | GCNGC | 2 cut(s) | 186, 219 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| BmiI | GGNNCC | 3 cut(s) | 135, 150, 277 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BpmI | CTGGAG | 1 cut(s) | 225 |
| BpuEI | CTTGAG | 2 cut(s) | 138, 200 |
| BpuMI | CCSGG | 1 cut(s) | 191 |
| BsaJI | CCNNGG | 4 cut(s) | 82, 141, 279, 396 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 83, 129 |
| BseDI | CCNNGG | 4 cut(s) | 82, 141, 279, 396 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 83, 129 |
| BseRI | GAGGAG | 1 cut(s) | 222 |
| BseXI | GCAGC | 2 cut(s) | 196, 204 |
| BsgI | GTGCAG | 2 cut(s) | 61, 314 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 83, 129 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspACI | CCGC | 1 cut(s) | 244 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 3 cut(s) | 135, 150, 277 |
| BsrBI | CCGCTC | 1 cut(s) | 244 |
| BssECI | CCNNGG | 4 cut(s) | 82, 141, 279, 396 |
| BssT1I | CCWWGG | 2 cut(s) | 82, 141 |
| BstC8I | GCNNGC | 1 cut(s) | 297 |
| BstDSI | CCRYGG | 1 cut(s) | 396 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 381 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 2 cut(s) | 196, 204 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtgI | CCRYGG | 1 cut(s) | 396 |
| BtsI | GCAGTG | 1 cut(s) | 364 |
| BtsIMutI | CAGTG | 1 cut(s) | 364 |
| Cac8I | GCNNGC | 1 cut(s) | 297 |
| CviJI | RGCY | 7 cut(s) | 5, 69, 158, 187, 203, 299, 395 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 69, 158, 187, 203, 299, 395 |
| Eco130I | CCWWGG | 2 cut(s) | 82, 141 |
| EcoT14I | CCWWGG | 2 cut(s) | 82, 141 |
| ErhI | CCWWGG | 2 cut(s) | 82, 141 |
| FaiI | YATR | 2 cut(s) | 254, 336 |
| FblI | GTMKAC | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 2 cut(s) | 185, 218 |
| Fsp4HI | GCNGC | 2 cut(s) | 185, 218 |
| GluI | GCNGC | 2 cut(s) | 185, 218 |
| GsuI | CTGGAG | 1 cut(s) | 225 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 191 |
| HincII | GTYRAC | 1 cut(s) | 112 |
| HindII | GTYRAC | 1 cut(s) | 112 |
| HinfI | GANTC | 1 cut(s) | 108 |
| HpaII | CCGG | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 2 cut(s) | 112, 362 |
| Hpy188I | TCNGA | 2 cut(s) | 280, 322 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 2 cut(s) | 112, 362 |
| HpyAV | CCTTC | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 3 cut(s) | 42, 295, 375 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 381 |
| LmnI | GCTCC | 1 cut(s) | 192 |
| LpnPI | CCDG | 6 cut(s) | 79, 83, 189, 204, 281, 285 |
| Lsp1109I | GCAGC | 2 cut(s) | 196, 204 |
| MbiI | CCGCTC | 1 cut(s) | 244 |
| MboII | GAAGA | 2 cut(s) | 48, 105 |
| MfeI | CAATTG | 1 cut(s) | 117 |
| MluCI | AATT | 3 cut(s) | 117, 236, 386 |
| MlyI | GAGTC | 1 cut(s) | 117 |
| MmeI | TCCRAC | 1 cut(s) | 265 |
| MnlI | CCTC | 7 cut(s) | 16, 26, 162, 200, 274, 331, 349 |
| MseI | TTAA | 1 cut(s) | 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 143 |
| MspA1I | CMGCKG | 1 cut(s) | 203 |
| MspI | CCGG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| MunI | CAATTG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 381 |
| NciI | CCSGG | 1 cut(s) | 191 |
| NlaIV | GGNNCC | 3 cut(s) | 135, 150, 277 |
| OliI | CACNNNNGTG | 1 cut(s) | 143 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 129 |
| PfoI | TCCNGGA | 1 cut(s) | 189 |
| PkrI | GCNGC | 2 cut(s) | 186, 219 |
| PleI | GAGTC | 1 cut(s) | 116 |
| PpsI | GAGTC | 1 cut(s) | 116 |
| PspN4I | GGNNCC | 3 cut(s) | 135, 150, 277 |
| PvuII | CAGCTG | 1 cut(s) | 203 |
| RseI | CAYNNNNRTG | 1 cut(s) | 143 |
| SaqAI | TTAA | 1 cut(s) | 234 |
| SatI | GCNGC | 2 cut(s) | 185, 218 |
| SchI | GAGTC | 1 cut(s) | 117 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SetI | ASST | 8 cut(s) | 88, 147, 160, 189, 205, 285, 312, 342 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 143 |
| SmlI | CTYRAG | 2 cut(s) | 153, 179 |
| SmoI | CTYRAG | 2 cut(s) | 153, 179 |
| Sse9I | AATT | 3 cut(s) | 117, 236, 386 |
| SsiI | CCGC | 1 cut(s) | 244 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| StyI | CCWWGG | 2 cut(s) | 82, 141 |
| TasI | AATT | 3 cut(s) | 117, 236, 386 |
| Tru1I | TTAA | 1 cut(s) | 234 |
| Tru9I | TTAA | 1 cut(s) | 234 |
| TscAI | CASTG | 1 cut(s) | 371 |
| TseI | GCWGC | 2 cut(s) | 184, 217 |
| TspRI | CASTG | 1 cut(s) | 371 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 236 |
| XmiI | GTMKAC | 1 cut(s) | 361 |