Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000181.1

Orthogroup ID

OG0006147

Physical Location & Seq

Genomic Coordinates Forward (+)

974 .. 4162

Gene Structure 3189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000181.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

atggagatggagatggagatgagagccgaagaggagatagaagtaggacaagacttaaccccatcactccctcctctctctttcgctctccacgactcccttctctcctctcactgctcttcctgcttctctcccctccctcctcaaccttttcctcctctccatacccctccctttcccaacaattcccaccatgtccactactgctccccactctgctccgcctccgattctcccctccacctctccagcgccgagcctcgccttctccgcctcctccattcccacccctccacctacccccacggcgactcctccgacctccgcgccgccctccgcctcctccactcccttccccccacctctccccccgctccaacccgcatctccggcctcctgaccaaccgcctcagactcattgaccacgacgatgacctcagaattcgcgacggcgccagggctatgtttctcgccaggacaatgcgggacgctcgggacgacgacgccgttttggaggaggctgtgctgtgcctggtcctgaccaacgccgtcgaggtccaggataacaccggccgcaccctcggaattgcagtgtacgattcctgcttctcttggatcaaccacagctgttctcccaatgcctgctaccgctttctgctgtgctcgccgtcgccgccgcagtgcgccgagacgccgctgcgtattgtccccgccggccaagtaacgagcatcaagagaatcaataggggggaggaagtcactattacatacactgacttgttgcaaccaaaggctatgaggcagtctgaattgtggtcaaggtatcggtttgtgtgctcatgtaagagatgtagtgcatcacccctaacttatgtcgaccgtgctttggaggatatctatgcagtcaatttcaactgttccagattgagttcagatattagcttcaatagagacaaggcaactgaaagattgactgattacattgatgatgctatagctgactatctgtcaattggtaatcctgaatcttcttgtcagaggcttgagcaggtactcacacaaggtctttctgataaccagcaagagggaaatgaagaaaaatcagagttgacttactggttgagcccattgcatcacctctctctaaatgcatacaccacattggcttcagcatataaaatccgtgcagatgacctattaactttatcttcttcaatggagtcaataggcaatcatgtaaggaaagcttttggcatgagcaggacaagcgcagcatactcattgttgctcgcaggcgcagctcaccatctctttaactctgaatcttccctagttgtaaatgttgcacatttctggacgatcactggggattccttgctaaatcttgctaagagctcactctggagtgagataaacagatgggatttgcctgtgtcagaccacttggaactataccttattgcaaaatacaaatgtccaaagtgctcattgatggataaattcgaaacttattcatttcataatccagtgaagcatgcagattttgaacatgcatcgagggagtttcttgattgtgtcactaacttgacacaaaaagtttggtattttctggttcaaggttgccgctatctgggactatgtaagaatcctatagatttttgctggcttgacacttcaaaatattcaagtgaatgtgaagttcttactcagtctactggtactaactgtgggaataaaaggagtttttctggaagtgaagcagaggaagacaccaaccagttaaggatgtatattttatatctcggtgtccattgcttactatatggagaatttcttgcgagcatatgttatggtaggtattcccattcgacttgttatgttcataacattttagatcgtgaagagaaatcatcaaacccttgtcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

642

Amino Acids

72.26

Weight (kDa)

5.72

Isoelectric Point (pI)

49.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43245 AT1G43245
fragaria_vesca	FvH4_2g13430
malus_domestica	MD05G1027900.v1.1
prunus_persica	Prupe.8G033600_v2.0.a1 Prupe.8G033600_v2.0.a1
pyrus_communis	pycom05g02000
rosa_chinensis	RchiOBHm_Chr5g0050861 RchiOBHm_Chr6g0275051
rosa_laevigata	RLG00000013502
rosa_multiflora	Rmu_sc0000181.1_g000001 Rmu_sc0000447.1_g000003 Rmu_sc0020326.1_g000001
rosa_roxburghii	Rroxscaffold_7G00193730
rosa_rugosa	Rorug05G0264900.1 Rorug06G0087100 Rorug06G0087100
rosa_samantha	Rh5AG336700 Rh5BG346300 Rh5CG373900 Rh5CG374000 Rh5DG359200 Rh6AG202000 Rh6BG205500 Rh6CG207300 Rh6DG197300
rosa_wichuraiana	Rw6G017560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1039
AccB1I	GGYRCC	1 cut(s)	452
AccBSI	CCGCTC	1 cut(s)	374
AccI	GTMKAC	2 cut(s)	876, 1712
AccII	CGCG	2 cut(s)	327, 447
AclWI	GGATC	1 cut(s)	623
AcoI	YGGCCR	2 cut(s)	571, 715
AcsI	RAATTY	3 cut(s)	441, 1499, 1829
AcuI	CTGAAG	1 cut(s)	1152
AcyI	GRCGYC	3 cut(s)	453, 504, 692
AfaI	GTAC	3 cut(s)	596, 1053, 1720
AfiI	CCNNNNNNNGG	3 cut(s)	886, 1084, 1630
AgsI	TTSAA	7 cut(s)	913, 946, 1215, 1547, 1616, 1677, 1686
AhdI	GACNNNNNGTC	1 cut(s)	1006
AjnI	CCWGG	4 cut(s)	455, 473, 531, 558
AluBI	AGCT	6 cut(s)	627, 942, 998, 1247, 1301, 1395
AluI	AGCT	6 cut(s)	627, 942, 998, 1247, 1301, 1395
Alw21I	GWGCWC	4 cut(s)	665, 839, 1397, 1487
Alw26I	GTCTC	2 cut(s)	683, 945
AlwI	GGATC	1 cut(s)	623
Ama87I	CYCGRG	1 cut(s)	492
AoxI	GGCC	3 cut(s)	391, 571, 715
ApeKI	GCWGC	3 cut(s)	697, 1271, 1298
ApoI	RAATTY	3 cut(s)	441, 1499, 1829
AspLEI	GCGC	6 cut(s)	254, 329, 455, 686, 1271, 1298
AspS9I	GGNCC	2 cut(s)	535, 556
AsuHPI	GGTGA	3 cut(s)	852, 1127, 1295
AsuII	TTCGAA	1 cut(s)	1503
AvaI	CYCGRG	1 cut(s)	492
AvaII	GGWCC	2 cut(s)	535, 556
BanI	GGYRCC	1 cut(s)	452
BanII	GRGCYC	2 cut(s)	1127, 1397
BbsI	GAAGAC	1 cut(s)	1773
Bbv12I	GWGCWC	4 cut(s)	665, 839, 1397, 1487
BbvI	GCAGC	3 cut(s)	684, 1283, 1310
BccI	CCATC	5 cut(s)	7, 70, 1314, 1413, 1486
BceAI	ACGGC	5 cut(s)	322, 466, 491, 533, 652
BciT130I	CCWGG	4 cut(s)	457, 475, 533, 560
BcoDI	GTCTC	2 cut(s)	683, 945
BfaI	CTAG	1 cut(s)	1331
BfmI	CTRYAG	2 cut(s)	993, 1650
BfoI	RGCGCY	2 cut(s)	255, 456
BfuAI	ACCTGC	1 cut(s)	1039
BisI	GCNGC	9 cut(s)	330, 574, 674, 677, 695, 698, 1272, 1299, 1624
BlsI	GCNGC	9 cut(s)	331, 575, 675, 678, 696, 699, 1273, 1300, 1625
Bme1390I	CCNGG	4 cut(s)	457, 475, 533, 560
Bme18I	GGWCC	2 cut(s)	535, 556
BmeRI	GACNNNNNGTC	1 cut(s)	1006
BmeT110I	CYCGRG	1 cut(s)	492
BmgT120I	GGNCC	2 cut(s)	535, 556
BmiI	GGNNCC	1 cut(s)	454
BmrFI	CCNGG	4 cut(s)	457, 475, 533, 560
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	6 cut(s)	393, 738, 866, 979, 1141, 1562
BmuI	ACTGGG	1 cut(s)	1374
BpiI	GAAGAC	1 cut(s)	1773
BpmI	CTGGAG	2 cut(s)	232, 1423
Bpu14I	TTCGAA	1 cut(s)	1503
BpuEI	CTTGAG	1 cut(s)	1064
BsaHI	GRCGYC	3 cut(s)	453, 504, 692
BsaJI	CCNNGG	3 cut(s)	304, 456, 580
BsaXI	ACNNNNNCTCC	4 cut(s)	191, 221, 296, 326
Bsc4I	CCNNNNNNNGG	3 cut(s)	886, 1084, 1630
Bse118I	RCCGGY	2 cut(s)	569, 713
Bse1I	ACTGG	5 cut(s)	1121, 1369, 1526, 1720, 1777
Bse3DI	GCAATG	2 cut(s)	1127, 1810
BseBI	CCWGG	4 cut(s)	457, 475, 533, 560
BseDI	CCNNGG	3 cut(s)	304, 456, 580
BseGI	GGATG	1 cut(s)	1791
BseLI	CCNNNNNNNGG	3 cut(s)	886, 1084, 1630
BseMI	GCAATG	2 cut(s)	1127, 1810
BseMII	CTCAG	3 cut(s)	424, 451, 1721
BseNI	ACTGG	5 cut(s)	1121, 1369, 1526, 1720, 1777
BseRI	GAGGAG	9 cut(s)	47, 63, 97, 132, 147, 266, 304, 332, 530
BseX3I	CGGCCG	1 cut(s)	571
BseXI	GCAGC	3 cut(s)	684, 1283, 1310
BsgI	GTGCAG	1 cut(s)	1206
Bsh1236I	CGCG	2 cut(s)	327, 447
Bsh1285I	CGRYCG	2 cut(s)	574, 880
BshFI	GGCC	3 cut(s)	393, 573, 717
BshNI	GGYRCC	1 cut(s)	452
BsiEI	CGRYCG	2 cut(s)	574, 880
BsiHKAI	GWGCWC	4 cut(s)	665, 839, 1397, 1487
BsiHKCI	CYCGRG	1 cut(s)	492
BsiSI	CCGG	3 cut(s)	390, 570, 714
BslFI	GGGAC	4 cut(s)	500, 509, 692, 1647
BslI	CCNNNNNNNGG	3 cut(s)	886, 1084, 1630
BsmAI	GTCTC	2 cut(s)	683, 945
BsmBI	CGTCTC	1 cut(s)	683
BsmFI	GGGAC	4 cut(s)	500, 509, 692, 1647
BsnI	GGCC	3 cut(s)	393, 573, 717
BsoBI	CYCGRG	1 cut(s)	492
Bsp119I	TTCGAA	1 cut(s)	1503
Bsp1286I	GDGCHC	5 cut(s)	665, 839, 1127, 1397, 1487
Bsp143I	GATC	3 cut(s)	615, 1359, 1894
Bsp68I	TCGCGA	1 cut(s)	447
BspANI	GGCC	3 cut(s)	393, 573, 717
BspCNI	CTCAG	3 cut(s)	423, 450, 1720
BspFNI	CGCG	2 cut(s)	327, 447
BspLI	GGNNCC	1 cut(s)	454
BspMI	ACCTGC	1 cut(s)	1039
BspPI	GGATC	1 cut(s)	623
BspQI	GCTCTTC	1 cut(s)	124
BspT104I	TTCGAA	1 cut(s)	1503
BspT107I	GGYRCC	1 cut(s)	452
BsrBI	CCGCTC	1 cut(s)	374
BsrDI	GCAATG	2 cut(s)	1127, 1810
BsrFI	RCCGGY	2 cut(s)	569, 713
BsrI	ACTGG	5 cut(s)	1121, 1369, 1526, 1720, 1777
BssAI	RCCGGY	2 cut(s)	569, 713
BssECI	CCNNGG	3 cut(s)	304, 456, 580
BssMI	GATC	3 cut(s)	615, 1359, 1894
BssNI	GRCGYC	3 cut(s)	453, 504, 692
Bst2UI	CCWGG	4 cut(s)	457, 475, 533, 560
Bst4CI	ACNGT	3 cut(s)	881, 917, 1727
Bst6I	CTCTTC	3 cut(s)	24, 124, 1896
BstACI	GRCGYC	3 cut(s)	453, 504, 692
BstBI	TTCGAA	1 cut(s)	1503
BstC8I	GCNNGC	8 cut(s)	643, 665, 715, 1290, 1294, 1536, 1664, 1840
BstDEI	CTNAG	4 cut(s)	410, 437, 1389, 1707
BstDSI	CCRYGG	1 cut(s)	304
BstF5I	GGATG	1 cut(s)	1791
BstFNI	CGCG	2 cut(s)	327, 447
BstH2I	RGCGCY	2 cut(s)	255, 456
BstHHI	GCGC	6 cut(s)	254, 329, 455, 686, 1271, 1298
BstKTI	GATC	3 cut(s)	618, 1362, 1897
BstMAI	GTCTC	2 cut(s)	683, 945
BstMBI	GATC	3 cut(s)	615, 1359, 1894
BstMCI	CGRYCG	2 cut(s)	574, 880
BstMWI	GCNNNNNNNGC	7 cut(s)	123, 270, 390, 664, 673, 1266, 1298
BstNI	CCWGG	4 cut(s)	457, 475, 533, 560
BstNSI	RCATGY	2 cut(s)	1538, 1553
BstSCI	CCNGG	4 cut(s)	455, 473, 531, 558
BstSFI	CTRYAG	2 cut(s)	993, 1650
BstUI	CGCG	2 cut(s)	327, 447
BstV1I	GCAGC	3 cut(s)	684, 1283, 1310
BstV2I	GAAGAC	1 cut(s)	1773
BstZI	CGGCCG	1 cut(s)	571
BsuRI	GGCC	3 cut(s)	393, 573, 717
BtgI	CCRYGG	1 cut(s)	304
BtsCI	GGATG	1 cut(s)	1791
BtsI	GCAGTG	3 cut(s)	112, 597, 686
BtsIMutI	CAGTG	6 cut(s)	112, 597, 686, 771, 1362, 1533
BtuMI	TCGCGA	1 cut(s)	447
BveI	ACCTGC	1 cut(s)	1039
Cac8I	GCNNGC	8 cut(s)	643, 665, 715, 1290, 1294, 1536, 1664, 1840
CfoI	GCGC	6 cut(s)	254, 329, 455, 686, 1271, 1298
Cfr10I	RCCGGY	2 cut(s)	569, 713
Cfr13I	GGNCC	2 cut(s)	535, 556
CseI	GACGC	3 cut(s)	497, 512, 700
Csp6I	GTAC	3 cut(s)	595, 1052, 1719
CviAII	CATG	6 cut(s)	194, 840, 1235, 1255, 1535, 1550
CviQI	GTAC	3 cut(s)	595, 1052, 1719
DdeI	CTNAG	4 cut(s)	410, 437, 1389, 1707
DinI	GGCGCC	1 cut(s)	454
DpnI	GATC	3 cut(s)	617, 1361, 1896
DpnII	GATC	3 cut(s)	615, 1359, 1894
DriI	GACNNNNNGTC	1 cut(s)	1006
EaeI	YGGCCR	2 cut(s)	571, 715
EagI	CGGCCG	1 cut(s)	571
Eam1104I	CTCTTC	3 cut(s)	24, 124, 1896
Eam1105I	GACNNNNNGTC	1 cut(s)	1006
EarI	CTCTTC	3 cut(s)	24, 124, 1896
EciI	GGCGGA	3 cut(s)	211, 260, 326
Ecl136II	GAGCTC	1 cut(s)	1395
EclXI	CGGCCG	1 cut(s)	571
Eco24I	GRGCYC	2 cut(s)	1127, 1397
Eco32I	GATATC	1 cut(s)	895
Eco47I	GGWCC	2 cut(s)	535, 556
Eco52I	CGGCCG	1 cut(s)	571
Eco53kI	GAGCTC	1 cut(s)	1395
Eco57I	CTGAAG	1 cut(s)	1152
Eco88I	CYCGRG	1 cut(s)	492
EcoICRI	GAGCTC	1 cut(s)	1395
EcoRI	GAATTC	1 cut(s)	441
EcoRII	CCWGG	4 cut(s)	455, 473, 531, 558
EcoRV	GATATC	1 cut(s)	895
EcoT22I	ATGCAT	2 cut(s)	1153, 1555
EcoT38I	GRGCYC	2 cut(s)	1127, 1397
EgeI	GGCGCC	1 cut(s)	454
EheI	GGCGCC	1 cut(s)	454
Esp3I	CGTCTC	1 cut(s)	683
FaeI	CATG	6 cut(s)	197, 843, 1238, 1258, 1538, 1553
FalI	AAGNNNNNCTT	2 cut(s)	1231, 1263
FaqI	GGGAC	4 cut(s)	500, 509, 692, 1647
FatI	CATG	6 cut(s)	193, 839, 1234, 1254, 1534, 1549
FauI	CCCGC	4 cut(s)	379, 389, 477, 718
FauNDI	CATATG	1 cut(s)	1844
FblI	GTMKAC	2 cut(s)	876, 1712
Fnu4HI	GCNGC	9 cut(s)	330, 574, 674, 677, 695, 698, 1272, 1299, 1624
FokI	GGATG	1 cut(s)	1798
FriOI	GRGCYC	2 cut(s)	1127, 1397
Fsp4HI	GCNGC	9 cut(s)	330, 574, 674, 677, 695, 698, 1272, 1299, 1624
FspBI	CTAG	1 cut(s)	1331
GlaI	GCGC	6 cut(s)	253, 328, 454, 685, 1270, 1297
GluI	GCNGC	9 cut(s)	330, 574, 674, 677, 695, 698, 1272, 1299, 1624
GsuI	CTGGAG	2 cut(s)	232, 1423
HaeII	RGCGCY	2 cut(s)	255, 456
HaeIII	GGCC	3 cut(s)	393, 573, 717
HapII	CCGG	3 cut(s)	390, 570, 714
HgaI	GACGC	3 cut(s)	497, 512, 700
HhaI	GCGC	6 cut(s)	254, 329, 455, 686, 1271, 1298
Hin1I	GRCGYC	3 cut(s)	453, 504, 692
Hin1II	CATG	6 cut(s)	197, 843, 1238, 1258, 1538, 1553
Hin6I	GCGC	6 cut(s)	252, 327, 453, 684, 1269, 1296
HinP1I	GCGC	6 cut(s)	252, 327, 453, 684, 1269, 1296
HincII	GTYRAC	2 cut(s)	877, 1110
HindII	GTYRAC	2 cut(s)	877, 1110
HindIII	AAGCTT	1 cut(s)	1245
HpaII	CCGG	3 cut(s)	390, 570, 714
HphI	GGTGA	3 cut(s)	852, 1127, 1295
Hpy166II	GTNNAC	5 cut(s)	199, 595, 877, 1110, 1713
Hpy8I	GTNNAC	5 cut(s)	199, 595, 877, 1110, 1713
Hpy99I	CGWCG	6 cut(s)	431, 452, 503, 506, 554, 673
HpyAV	CCTTC	3 cut(s)	110, 275, 362
HpyCH4III	ACNGT	3 cut(s)	881, 917, 1727
HpyF10VI	GCNNNNNNNGC	7 cut(s)	123, 270, 390, 664, 673, 1266, 1298
HpyF3I	CTNAG	4 cut(s)	410, 437, 1389, 1707
Hsp92I	GRCGYC	3 cut(s)	453, 504, 692
Hsp92II	CATG	6 cut(s)	197, 843, 1238, 1258, 1538, 1553
HspAI	GCGC	6 cut(s)	252, 327, 453, 684, 1269, 1296
KasI	GGCGCC	1 cut(s)	452
KroI	GCCGGC	1 cut(s)	713
KroNI	GCCGGC	1 cut(s)	715
Kzo9I	GATC	3 cut(s)	615, 1359, 1894
LguI	GCTCTTC	1 cut(s)	124
LmnI	GCTCC	3 cut(s)	212, 224, 379
Lsp1109I	GCAGC	3 cut(s)	684, 1283, 1310
LweI	GCATC	6 cut(s)	393, 738, 866, 979, 1141, 1562
MaeI	CTAG	1 cut(s)	1331
MaeIII	GTNAC	3 cut(s)	721, 757, 1576
MalI	GATC	3 cut(s)	617, 1361, 1896
MbiI	CCGCTC	1 cut(s)	374
MboI	GATC	3 cut(s)	615, 1359, 1894
MboII	GAAGA	9 cut(s)	41, 111, 1020, 1106, 1200, 1203, 1317, 1778, 1913
MfeI	CAATTG	1 cut(s)	1011
MhlI	GDGCHC	5 cut(s)	665, 839, 1127, 1397, 1487
MluCI	AATT	8 cut(s)	184, 441, 585, 809, 907, 1011, 1499, 1829
Mly113I	GGCGCC	1 cut(s)	453
MlyI	GAGTC	4 cut(s)	89, 305, 408, 1229
MmeI	TCCRAC	2 cut(s)	342, 401
Mph1103I	ATGCAT	2 cut(s)	1153, 1555
MroNI	GCCGGC	1 cut(s)	713
MseI	TTAA	4 cut(s)	56, 1199, 1314, 1781
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	627, 697
MspI	CCGG	3 cut(s)	390, 570, 714
MspR9I	CCNGG	4 cut(s)	457, 475, 533, 560
MunI	CAATTG	1 cut(s)	1011
MvaI	CCWGG	4 cut(s)	457, 475, 533, 560
MvnI	CGCG	2 cut(s)	327, 447
MwoI	GCNNNNNNNGC	7 cut(s)	123, 270, 390, 664, 673, 1266, 1298
NaeI	GCCGGC	1 cut(s)	715
NarI	GGCGCC	1 cut(s)	453
NdeI	CATATG	1 cut(s)	1844
NdeII	GATC	3 cut(s)	615, 1359, 1894
NgoMIV	GCCGGC	1 cut(s)	713
NlaIII	CATG	6 cut(s)	197, 843, 1238, 1258, 1538, 1553
NlaIV	GGNNCC	1 cut(s)	454
NmeAIII	GCCGAG	2 cut(s)	280, 712
NmuCI	GTSAC	2 cut(s)	757, 1576
NruI	TCGCGA	1 cut(s)	447
NsiI	ATGCAT	2 cut(s)	1153, 1555
NspI	RCATGY	2 cut(s)	1538, 1553
NspV	TTCGAA	1 cut(s)	1503
PaeI	GCATGC	1 cut(s)	1538
PciSI	GCTCTTC	1 cut(s)	124
PcsI	WCGNNNNNNNCGW	3 cut(s)	90, 495, 504
PdiI	GCCGGC	1 cut(s)	715
PfeI	GAWTC	7 cut(s)	230, 599, 738, 1025, 1322, 1370, 1645
PfoI	TCCNGGA	1 cut(s)	558
PkrI	GCNGC	9 cut(s)	331, 575, 675, 678, 696, 699, 1273, 1300, 1625
PleI	GAGTC	4 cut(s)	89, 305, 408, 1228
PluTI	GGCGCC	1 cut(s)	456
PpsI	GAGTC	4 cut(s)	89, 305, 408, 1228
Psp124BI	GAGCTC	1 cut(s)	1397
Psp6I	CCWGG	4 cut(s)	455, 473, 531, 558
PspGI	CCWGG	4 cut(s)	455, 473, 531, 558
PspN4I	GGNNCC	1 cut(s)	454
PspPI	GGNCC	2 cut(s)	535, 556
PvuII	CAGCTG	1 cut(s)	627
RruI	TCGCGA	1 cut(s)	447
RsaI	GTAC	3 cut(s)	596, 1053, 1720
RsaNI	GTAC	3 cut(s)	595, 1052, 1719
RseI	CAYNNNNRTG	1 cut(s)	429
SacI	GAGCTC	1 cut(s)	1397
SalI	GTCGAC	1 cut(s)	875
SapI	GCTCTTC	1 cut(s)	124
SaqAI	TTAA	4 cut(s)	56, 1199, 1314, 1781
SatI	GCNGC	9 cut(s)	330, 574, 674, 677, 695, 698, 1272, 1299, 1624
Sau3AI	GATC	3 cut(s)	615, 1359, 1894
Sau96I	GGNCC	2 cut(s)	535, 556
SchI	GAGTC	4 cut(s)	89, 305, 408, 1229
ScrFI	CCNGG	4 cut(s)	457, 475, 533, 560
SduI	GDGCHC	5 cut(s)	665, 839, 1127, 1397, 1487
SfaNI	GCATC	6 cut(s)	393, 738, 866, 979, 1141, 1562
SfcI	CTRYAG	2 cut(s)	993, 1650
SfoI	GGCGCC	1 cut(s)	454
SfuI	TTCGAA	1 cut(s)	1503
SinI	GGWCC	2 cut(s)	535, 556
SmiMI	CAYNNNNRTG	1 cut(s)	429
SmlI	CTYRAG	1 cut(s)	1043
SmoI	CTYRAG	1 cut(s)	1043
SphI	GCATGC	1 cut(s)	1538
Sse9I	AATT	8 cut(s)	184, 441, 585, 809, 907, 1011, 1499, 1829
SspDI	GGCGCC	1 cut(s)	452
SspI	AATATT	1 cut(s)	1682
SspMI	CTAG	1 cut(s)	1331
SstI	GAGCTC	1 cut(s)	1397
StyD4I	CCNGG	4 cut(s)	455, 473, 531, 558
TaaI	ACNGT	3 cut(s)	881, 917, 1727
TaqI	TCGA	5 cut(s)	552, 876, 1503, 1556, 1868
TasI	AATT	8 cut(s)	184, 441, 585, 809, 907, 1011, 1499, 1829
TauI	GCSGC	6 cut(s)	332, 576, 676, 679, 697, 1626
TfiI	GAWTC	7 cut(s)	230, 599, 738, 1025, 1322, 1370, 1645
Tru1I	TTAA	4 cut(s)	56, 1199, 1314, 1781
Tru9I	TTAA	4 cut(s)	56, 1199, 1314, 1781
TscAI	CASTG	6 cut(s)	119, 597, 686, 778, 1369, 1533
TseFI	GTSAC	2 cut(s)	757, 1576
TseI	GCWGC	3 cut(s)	697, 1271, 1298
Tsp45I	GTSAC	2 cut(s)	757, 1576
TspDTI	ATGAA	4 cut(s)	1107, 1503, 1508, 1871
TspGWI	ACGGA	1 cut(s)	1172
TspRI	CASTG	6 cut(s)	119, 597, 686, 778, 1369, 1533
VpaK11BI	GGWCC	2 cut(s)	535, 556
XapI	RAATTY	3 cut(s)	441, 1499, 1829
XceI	RCATGY	2 cut(s)	1538, 1553
XmiI	GTMKAC	2 cut(s)	876, 1712
XspI	CTAG	1 cut(s)	1331
Zsp2I	ATGCAT	2 cut(s)	1153, 1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.