Rh5CG374000

Protein SET DOMAIN GROUP

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
48158341 .. 48160991
2651 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG374000.1

Sequence Viewer

Length: 1434 bp
ATGGAGATGGAGATGAGAGCCGAAGAGGAGATAGAACTAGGACAAGACTTAACCCCATCACTCCCTCCTCTCTCTTTCGCTCTCCACGACTCCCTTCTCTCCTCTCACTGCTCTTCCTGCTTCTCTTCCCTCCCTCCTCAACCTTTTCCCCCTCTCCATACCCCTCCCTTTCCCAACAATTCCCACCATGTCCACTACTGCTCCCCACTCTGCTCCGCCTCCGATTCTCCCCTCCACCTCTCCAGCGCCGAGTCTCGCCTTCTCCTCCTCCTCCTCCATTCCCACCCCCACGGCGACTCCTCCGACCTCCGCGCCGCCCTCCGCCTCCTCCACTCCCTTCCCGCCACCTCTCCCCCCGCACTTCCCCGCATCTCCGGCCTCCTGACCAACCGCCTCAGATTCATTGACCACGATGATGACCTCAGAATTCGCGACGGCGCCAGGGCTATGTTCCTCGCCAGGACAATGCGGGACGCTCAGGACGACGACGACGCCGTTTTGGAGGAGGCTGTGCTGTGCCTGGTCCTGACCAACGCCGTCGAGGTCCAGGATAACACCGGCCGCACCCTCGGAATTGCAGTGTACGATTCCTGCTTCTCTTGGATCAACTACAGCTGTTCTCCCAATGCCTGCTACCGCTTTCTGCTGTCCTCGCCGTCGCCGCCGCAGTGCGCTGAGACGCCGCTGCGTATTGTCCCCGCCGGCCAAATTGAGGGTGGTGTTTGTAGCAAGAATTTGTTAACAAAAGAATGCGGGAAATATGGTCCAAGAGTGATAGTTAGGAGCATCAAGAGAATCAATAGGGGAGACGAAGTCACTATTACGTACACTGACTTGTTGCAACCAAAGGCTATGAGGCAGTCTGAATTATGGTCAAGGTATCGGTTTGTGTGCTCATGTAAGAGATGTAGTGCATCACCCTTAACTCATGTCGACCATGCTTTGGAGGATATCTATGCAGTCAATTTCAACTCTTCCAGATTGAGTTCAGATATTAGCTTCAATAGAGACAAGGCAACTGAAAGATTGACTGATTACATTGATGATGCTATAGCTGACTATCTGTCAATTGGTAAGCCTGAATCTTCTTGTCAGAGGCTTGAGCAGGTACTCACACAAGGTCTTTCTGATAACCAGCAAGAGGGAAATGAAGAAAAATCAGAGTTAACTTTCTGGTTGAACCCATTGCATCACCTCTCTCTAAATGCGTACACCACATTGGCTTCAGCGTATAAAATCCTTGCAGATGACCAATTAACTTTATCTTCTTCAATAGAGTCAATAGGCAATCATGTAATGAAAGCTTTTGGCATGAGCAGGACAAGCGCGGCATACTCATTGTTGCTCGCAGGCGCAGCTCACCATCTCTTTAACTCTGAATCTTCCCTAGTTGTAAATGTTGCACATTTCTGGACGATCGCTGGGGTGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

477

Amino Acids

52.78

Weight (kDa)

5.7

Isoelectric Point (pI)

53.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1096
AccB1I GGYRCC 1 cut(s) 437
AccB7I CCANNNNNTGG 1 cut(s) 943
AccI GTMKAC 1 cut(s) 933
AccII CGCG 3 cut(s) 312, 432, 1328
AclWI GGATC 1 cut(s) 611
AcoI YGGCCR 2 cut(s) 559, 703
AcsI RAATTY 2 cut(s) 426, 733
AcuI CTGAAG 1 cut(s) 1209
AcyI GRCGYC 3 cut(s) 438, 492, 680
AfaI GTAC 4 cut(s) 584, 827, 1110, 1211
AfiI CCNNNNNNNGG 3 cut(s) 712, 943, 1141
AgsI TTSAA 4 cut(s) 970, 1003, 1180, 1272
AhdI GACNNNNNGTC 1 cut(s) 1063
AjnI CCWGG 4 cut(s) 440, 458, 519, 546
AluBI AGCT 5 cut(s) 615, 999, 1055, 1304, 1358
AluI AGCT 5 cut(s) 615, 999, 1055, 1304, 1358
Alw21I GWGCWC 1 cut(s) 896
Alw26I GTCTC 4 cut(s) 258, 671, 801, 1002
AlwI GGATC 1 cut(s) 611
AoxI GGCC 3 cut(s) 376, 559, 703
ApeKI GCWGC 2 cut(s) 685, 1355
ApoI RAATTY 2 cut(s) 426, 733
AspLEI GCGC 6 cut(s) 248, 314, 440, 674, 1328, 1355
AspS9I GGNCC 3 cut(s) 523, 544, 764
AsuHPI GGTGA 3 cut(s) 909, 1184, 1352
AvaII GGWCC 3 cut(s) 523, 544, 764
BanI GGYRCC 1 cut(s) 437
Bbv12I GWGCWC 1 cut(s) 896
BbvI GCAGC 2 cut(s) 672, 1367
BccI CCATC 2 cut(s) 64, 1371
BceAI ACGGC 5 cut(s) 307, 451, 479, 521, 640
BciT130I CCWGG 4 cut(s) 442, 460, 521, 548
BcoDI GTCTC 4 cut(s) 258, 671, 801, 1002
BfaI CTAG 2 cut(s) 38, 1388
BfmI CTRYAG 2 cut(s) 610, 1050
BfoI RGCGCY 2 cut(s) 249, 441
BfuAI ACCTGC 1 cut(s) 1096
BisI GCNGC 8 cut(s) 315, 562, 662, 665, 683, 686, 1329, 1356
BlsI GCNGC 8 cut(s) 316, 563, 663, 666, 684, 687, 1330, 1357
Bme1390I CCNGG 4 cut(s) 442, 460, 521, 548
Bme18I GGWCC 3 cut(s) 523, 544, 764
BmeRI GACNNNNNGTC 1 cut(s) 1063
BmgT120I GGNCC 3 cut(s) 523, 544, 764
BmiI GGNNCC 1 cut(s) 439
BmrFI CCNGG 4 cut(s) 442, 460, 521, 548
BmsI GCATC 5 cut(s) 378, 795, 923, 1036, 1198
BpmI CTGGAG 1 cut(s) 226
Bpu10I CCTNAGC 1 cut(s) 477
BpuEI CTTGAG 1 cut(s) 1121
BsaAI YACGTR 1 cut(s) 825
BsaHI GRCGYC 3 cut(s) 438, 492, 680
BsaJI CCNNGG 3 cut(s) 289, 441, 568
BsaXI ACNNNNNCTCC 6 cut(s) 185, 215, 281, 311, 798, 828
Bsc4I CCNNNNNNNGG 3 cut(s) 712, 943, 1141
Bse118I RCCGGY 2 cut(s) 557, 701
Bse3DI GCAATG 1 cut(s) 1184
BseBI CCWGG 4 cut(s) 442, 460, 521, 548
BseDI CCNNGG 3 cut(s) 289, 441, 568
BseLI CCNNNNNNNGG 3 cut(s) 712, 943, 1141
BseMI GCAATG 1 cut(s) 1184
BseMII CTCAG 4 cut(s) 409, 436, 491, 666
BseX3I CGGCCG 1 cut(s) 559
BseXI GCAGC 2 cut(s) 672, 1367
BseYI CCCAGC 1 cut(s) 1421
Bsh1236I CGCG 3 cut(s) 312, 432, 1328
Bsh1285I CGRYCG 2 cut(s) 562, 1419
BshFI GGCC 3 cut(s) 378, 561, 705
BshNI GGYRCC 1 cut(s) 437
BsiEI CGRYCG 2 cut(s) 562, 1419
BsiHKAI GWGCWC 1 cut(s) 896
BsiSI CCGG 3 cut(s) 375, 558, 702
BslFI GGGAC 2 cut(s) 485, 680
BslI CCNNNNNNNGG 3 cut(s) 712, 943, 1141
BsmAI GTCTC 4 cut(s) 258, 671, 801, 1002
BsmBI CGTCTC 2 cut(s) 671, 801
BsmFI GGGAC 2 cut(s) 485, 680
BsmI GAATGC 1 cut(s) 755
BsnI GGCC 3 cut(s) 378, 561, 705
Bsp1286I GDGCHC 1 cut(s) 896
Bsp143I GATC 2 cut(s) 603, 1416
Bsp68I TCGCGA 1 cut(s) 432
BspANI GGCC 3 cut(s) 378, 561, 705
BspCNI CTCAG 4 cut(s) 408, 435, 490, 667
BspFNI CGCG 3 cut(s) 312, 432, 1328
BspLI GGNNCC 1 cut(s) 439
BspMI ACCTGC 1 cut(s) 1096
BspPI GGATC 1 cut(s) 611
BspQI GCTCTTC 1 cut(s) 118
BspT107I GGYRCC 1 cut(s) 437
BsrDI GCAATG 1 cut(s) 1184
BsrFI RCCGGY 2 cut(s) 557, 701
BssAI RCCGGY 2 cut(s) 557, 701
BssECI CCNNGG 3 cut(s) 289, 441, 568
BssMI GATC 2 cut(s) 603, 1416
BssNI GRCGYC 3 cut(s) 438, 492, 680
Bst2UI CCWGG 4 cut(s) 442, 460, 521, 548
Bst6I CTCTTC 4 cut(s) 18, 118, 130, 979
BstACI GRCGYC 3 cut(s) 438, 492, 680
BstBAI YACGTR 1 cut(s) 825
BstC8I GCNNGC 4 cut(s) 631, 703, 1347, 1351
BstDEI CTNAG 4 cut(s) 395, 422, 477, 675
BstDSI CCRYGG 1 cut(s) 289
BstFNI CGCG 3 cut(s) 312, 432, 1328
BstH2I RGCGCY 2 cut(s) 249, 441
BstHHI GCGC 6 cut(s) 248, 314, 440, 674, 1328, 1355
BstKTI GATC 2 cut(s) 606, 1419
BstMAI GTCTC 4 cut(s) 258, 671, 801, 1002
BstMBI GATC 2 cut(s) 603, 1416
BstMCI CGRYCG 2 cut(s) 562, 1419
BstMWI GCNNNNNNNGC 6 cut(s) 117, 375, 652, 661, 1323, 1355
BstNI CCWGG 4 cut(s) 442, 460, 521, 548
BstSCI CCNGG 4 cut(s) 440, 458, 519, 546
BstSFI CTRYAG 2 cut(s) 610, 1050
BstSNI TACGTA 1 cut(s) 825
BstUI CGCG 3 cut(s) 312, 432, 1328
BstV1I GCAGC 2 cut(s) 672, 1367
BstZI CGGCCG 1 cut(s) 559
BsuRI GGCC 3 cut(s) 378, 561, 705
BtgI CCRYGG 1 cut(s) 289
BtsI GCAGTG 3 cut(s) 106, 585, 674
BtsIMutI CAGTG 4 cut(s) 106, 585, 674, 828
BtuMI TCGCGA 1 cut(s) 432
BveI ACCTGC 1 cut(s) 1096
Cac8I GCNNGC 4 cut(s) 631, 703, 1347, 1351
CfoI GCGC 6 cut(s) 248, 314, 440, 674, 1328, 1355
Cfr10I RCCGGY 2 cut(s) 557, 701
Cfr13I GGNCC 3 cut(s) 523, 544, 764
CseI GACGC 3 cut(s) 482, 500, 688
Csp6I GTAC 4 cut(s) 583, 826, 1109, 1210
CviAII CATG 6 cut(s) 188, 897, 929, 938, 1292, 1312
CviQI GTAC 4 cut(s) 583, 826, 1109, 1210
DdeI CTNAG 4 cut(s) 395, 422, 477, 675
DinI GGCGCC 1 cut(s) 439
DpnI GATC 2 cut(s) 605, 1418
DpnII GATC 2 cut(s) 603, 1416
DriI GACNNNNNGTC 1 cut(s) 1063
EaeI YGGCCR 2 cut(s) 559, 703
EagI CGGCCG 1 cut(s) 559
Eam1104I CTCTTC 4 cut(s) 18, 118, 130, 979
Eam1105I GACNNNNNGTC 1 cut(s) 1063
EarI CTCTTC 4 cut(s) 18, 118, 130, 979
EciI GGCGGA 2 cut(s) 205, 311
EclXI CGGCCG 1 cut(s) 559
Eco105I TACGTA 1 cut(s) 825
Eco32I GATATC 1 cut(s) 952
Eco47I GGWCC 3 cut(s) 523, 544, 764
Eco52I CGGCCG 1 cut(s) 559
Eco57I CTGAAG 1 cut(s) 1209
EcoRI GAATTC 1 cut(s) 426
EcoRII CCWGG 4 cut(s) 440, 458, 519, 546
EcoRV GATATC 1 cut(s) 952
EgeI GGCGCC 1 cut(s) 439
EheI GGCGCC 1 cut(s) 439
Esp3I CGTCTC 2 cut(s) 671, 801
FaeI CATG 6 cut(s) 191, 900, 932, 941, 1295, 1315
FaqI GGGAC 2 cut(s) 485, 680
FatI CATG 6 cut(s) 187, 896, 928, 937, 1291, 1311
FauI CCCGC 6 cut(s) 349, 364, 374, 462, 706, 746
FblI GTMKAC 1 cut(s) 933
Fnu4HI GCNGC 8 cut(s) 315, 562, 662, 665, 683, 686, 1329, 1356
Fsp4HI GCNGC 8 cut(s) 315, 562, 662, 665, 683, 686, 1329, 1356
FspBI CTAG 2 cut(s) 38, 1388
GlaI GCGC 6 cut(s) 247, 313, 439, 673, 1327, 1354
GluI GCNGC 8 cut(s) 315, 562, 662, 665, 683, 686, 1329, 1356
GsaI CCCAGC 1 cut(s) 1425
GsuI CTGGAG 1 cut(s) 226
HaeII RGCGCY 2 cut(s) 249, 441
HaeIII GGCC 3 cut(s) 378, 561, 705
HapII CCGG 3 cut(s) 375, 558, 702
HgaI GACGC 3 cut(s) 482, 500, 688
HhaI GCGC 6 cut(s) 248, 314, 440, 674, 1328, 1355
Hin1I GRCGYC 3 cut(s) 438, 492, 680
Hin1II CATG 6 cut(s) 191, 900, 932, 941, 1295, 1315
Hin6I GCGC 6 cut(s) 246, 312, 438, 672, 1326, 1353
HinP1I GCGC 6 cut(s) 246, 312, 438, 672, 1326, 1353
HincII GTYRAC 3 cut(s) 741, 934, 1167
HindII GTYRAC 3 cut(s) 741, 934, 1167
HindIII AAGCTT 1 cut(s) 1302
HpaI GTTAAC 2 cut(s) 741, 1167
HpaII CCGG 3 cut(s) 375, 558, 702
HphI GGTGA 3 cut(s) 909, 1184, 1352
Hpy166II GTNNAC 7 cut(s) 193, 583, 741, 828, 934, 1167, 1212
Hpy188III TCNNGA 7 cut(s) 382, 431, 479, 526, 790, 978, 1411
Hpy8I GTNNAC 7 cut(s) 193, 583, 741, 828, 934, 1167, 1212
Hpy99I CGWCG 6 cut(s) 437, 488, 491, 494, 542, 661
HpyAV CCTTC 3 cut(s) 104, 269, 347
HpyCH4IV ACGT 1 cut(s) 824
HpyCH4V TGCA 7 cut(s) 578, 841, 914, 959, 1189, 1244, 1403
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 375, 652, 661, 1323, 1355
HpyF3I CTNAG 4 cut(s) 395, 422, 477, 675
HpySE526I ACGT 1 cut(s) 824
Hsp92I GRCGYC 3 cut(s) 438, 492, 680
Hsp92II CATG 6 cut(s) 191, 900, 932, 941, 1295, 1315
HspAI GCGC 6 cut(s) 246, 312, 438, 672, 1326, 1353
KasI GGCGCC 1 cut(s) 437
KroI GCCGGC 1 cut(s) 701
KroNI GCCGGC 1 cut(s) 703
KspAI GTTAAC 2 cut(s) 741, 1167
Kzo9I GATC 2 cut(s) 603, 1416
LguI GCTCTTC 1 cut(s) 118
LmnI GCTCC 3 cut(s) 206, 218, 783
Lsp1109I GCAGC 2 cut(s) 672, 1367
LweI GCATC 5 cut(s) 378, 795, 923, 1036, 1198
MaeI CTAG 2 cut(s) 38, 1388
MaeII ACGT 1 cut(s) 824
MaeIII GTNAC 1 cut(s) 814
MalI GATC 2 cut(s) 605, 1418
MboI GATC 2 cut(s) 603, 1416
MboII GAAGA 9 cut(s) 35, 105, 117, 966, 1077, 1163, 1257, 1260, 1374
MfeI CAATTG 1 cut(s) 1068
MhlI GDGCHC 1 cut(s) 896
MluCI AATT 9 cut(s) 178, 426, 573, 708, 733, 866, 964, 1068, 1253
Mly113I GGCGCC 1 cut(s) 438
MlyI GAGTC 4 cut(s) 83, 260, 290, 1286
MmeI TCCRAC 1 cut(s) 327
MroNI GCCGGC 1 cut(s) 701
MseI TTAA 6 cut(s) 50, 740, 923, 1166, 1256, 1371
MslI CAYNNNNRTG 1 cut(s) 414
MspA1I CMGCKG 2 cut(s) 615, 685
MspI CCGG 3 cut(s) 375, 558, 702
MspR9I CCNGG 4 cut(s) 442, 460, 521, 548
MunI CAATTG 1 cut(s) 1068
Mva1269I GAATGC 1 cut(s) 755
MvaI CCWGG 4 cut(s) 442, 460, 521, 548
MvnI CGCG 3 cut(s) 312, 432, 1328
MwoI GCNNNNNNNGC 6 cut(s) 117, 375, 652, 661, 1323, 1355
NaeI GCCGGC 1 cut(s) 703
NarI GGCGCC 1 cut(s) 438
NdeII GATC 2 cut(s) 603, 1416
NgoMIV GCCGGC 1 cut(s) 701
NlaIII CATG 6 cut(s) 191, 900, 932, 941, 1295, 1315
NlaIV GGNNCC 1 cut(s) 439
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 814
NruI TCGCGA 1 cut(s) 432
PciSI GCTCTTC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 3 cut(s) 84, 480, 492
PctI GAATGC 1 cut(s) 755
PdiI GCCGGC 1 cut(s) 703
PfeI GAWTC 6 cut(s) 224, 399, 587, 795, 1082, 1379
PflFI GACNNNGTC 1 cut(s) 812
PflMI CCANNNNNTGG 1 cut(s) 943
PfoI TCCNGGA 1 cut(s) 546
PkrI GCNGC 8 cut(s) 316, 563, 663, 666, 684, 687, 1330, 1357
Ple19I CGATCG 1 cut(s) 1419
PleI GAGTC 4 cut(s) 83, 259, 290, 1285
PluTI GGCGCC 1 cut(s) 441
PpsI GAGTC 4 cut(s) 83, 259, 290, 1285
Ppu21I YACGTR 1 cut(s) 825
Psp6I CCWGG 4 cut(s) 440, 458, 519, 546
PspFI CCCAGC 1 cut(s) 1421
PspGI CCWGG 4 cut(s) 440, 458, 519, 546
PspN4I GGNNCC 1 cut(s) 439
PspPI GGNCC 3 cut(s) 523, 544, 764
PsyI GACNNNGTC 1 cut(s) 812
PvuI CGATCG 1 cut(s) 1419
PvuII CAGCTG 1 cut(s) 615
RruI TCGCGA 1 cut(s) 432
RsaI GTAC 4 cut(s) 584, 827, 1110, 1211
RsaNI GTAC 4 cut(s) 583, 826, 1109, 1210
RseI CAYNNNNRTG 1 cut(s) 414
SalI GTCGAC 1 cut(s) 932
SapI GCTCTTC 1 cut(s) 118
SaqAI TTAA 6 cut(s) 50, 740, 923, 1166, 1256, 1371
SatI GCNGC 8 cut(s) 315, 562, 662, 665, 683, 686, 1329, 1356
Sau3AI GATC 2 cut(s) 603, 1416
Sau96I GGNCC 3 cut(s) 523, 544, 764
SchI GAGTC 4 cut(s) 83, 260, 290, 1286
ScrFI CCNGG 4 cut(s) 442, 460, 521, 548
SduI GDGCHC 1 cut(s) 896
SfaNI GCATC 5 cut(s) 378, 795, 923, 1036, 1198
SfcI CTRYAG 2 cut(s) 610, 1050
SfoI GGCGCC 1 cut(s) 439
SinI GGWCC 3 cut(s) 523, 544, 764
SmiMI CAYNNNNRTG 1 cut(s) 414
SmlI CTYRAG 1 cut(s) 1100
SmoI CTYRAG 1 cut(s) 1100
SnaBI TACGTA 1 cut(s) 825
Sse9I AATT 9 cut(s) 178, 426, 573, 708, 733, 866, 964, 1068, 1253
SspDI GGCGCC 1 cut(s) 437
SspMI CTAG 2 cut(s) 38, 1388
StyD4I CCNGG 4 cut(s) 440, 458, 519, 546
TaiI ACGT 1 cut(s) 827
TaqI TCGA 2 cut(s) 540, 933
TasI AATT 9 cut(s) 178, 426, 573, 708, 733, 866, 964, 1068, 1253
TauI GCSGC 6 cut(s) 317, 564, 664, 667, 685, 1331
TfiI GAWTC 6 cut(s) 224, 399, 587, 795, 1082, 1379
Tru1I TTAA 6 cut(s) 50, 740, 923, 1166, 1256, 1371
Tru9I TTAA 6 cut(s) 50, 740, 923, 1166, 1256, 1371
TscAI CASTG 4 cut(s) 113, 585, 674, 835
TseFI GTSAC 1 cut(s) 814
TseI GCWGC 2 cut(s) 685, 1355
Tsp45I GTSAC 1 cut(s) 814
TspDTI ATGAA 3 cut(s) 391, 1164, 1313
TspRI CASTG 4 cut(s) 113, 585, 674, 835
Tth111I GACNNNGTC 1 cut(s) 812
Van91I CCANNNNNTGG 1 cut(s) 943
VpaK11BI GGWCC 3 cut(s) 523, 544, 764
XapI RAATTY 2 cut(s) 426, 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 713
XmiI GTMKAC 1 cut(s) 933
XspI CTAG 2 cut(s) 38, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.