Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006147

Physical Location & Seq

Genomic Coordinates Reverse (-)

54138657 .. 54141878

Gene Structure 3222 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG336700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGAGATGGAGATGGAGATGAGAGCCGAAGAGGAGATAGAAGTAGGACAAGACTTAACCCCATCACTCCCTCCTCTCTCTTTCGCTCTCCACGACTCCCTTCTCTCCTCTCACTGCTCTTCCTGCTTCTCTTCCCTCCCTCCTCAACCTTTTCCTCCTCTCCATACCCCTCCCTTTCCCAACAATTCCCACCATGTCCACTACTGCTCCCCACTCTGCTCCGCCTCCGATTCTCCCCTCCACCTCTCCAGCGCCGAGCCTCGCCTTCTCCTCCTCCTCCATTCCCACCCCTCCACCTACCCCCACGGCGACTCCTCCGACCTCCGCGCCGCCCTCCGCCTCCTCCACTCCCTTCCCGCCAACTCTCCCCCCGCTCTTCCCCGCATCTCCGGCCTCCTGACCAACCGCCTCAGATTCATTGACCACGATGATGACCTCAGAATTCGCGACGGCGCCAGGGCTATGTTTCTCGCCAGGACAATGCGGGACGCTCAGGACGACGACGACGCCGTTTTGGAGGAGGCTGTGCTGTGCCTGGTCCTGACCAACGCCGTCGAGGTCCAGGATAACACTGGCCGCACCCTCGGAATTGCAGTGTACGATTCCTGCTTCTCTTGGATCAACCACAGCTGTTCTCCCAATGCCTGCTACCGCTTTCTGCTGTCCTCGCCGTCGCCGTCGCCGCCGCAGTGCGCCGAGACGCCGCTGCGTATTGTCCCCGCCGGCCAAATTGAGAGTGGTGCTTGTAGCAAGAATTTGTTAACAAAAGAATGCGGGAAATATGGTCCAAGAGTGATAGTTAGGAGCATCAAGAGAATCAATAGGGGAGACGAAGTCACTATTACGTACACTGACTTGTTGCAACCAAAGGCTATGAGGCAGTCTGAATTATGGTCAAGGTATCGGTTTGTGTGCTCATGTAAGAGATGTAGTGCATCACCCCTGACTTATGTCGACCATGCTTTGGAGGATATCTATGCAGTCAATTTCAACTCTTCCAGATTGAGTTCAGATATTAGCTTCAATAGAGACAAGGCAACTGAAAGATTGACTGATTACATTGATGATGCTATAGCTGACTATCTGTCAATTGGTAATCCTGAATCTTCTTGTCAGAGGCTTGAGCAGGCACTCACACAAGGTCTTTCTGATAACCAGCAAGAGGGAAGTGAAGAAAAATCAGAGTTAGCTTACTGGTTGAACCCATTGCATCACCTCTCTCTAAATGCGTACACCACATTGGCTTCAGCGACAAGCGCGGCATACTCATTGTTGCTCGCAGGTGCAGCTCACCATCTCTTTAACTCTGAATCTTCCCTAGTTGTAAATGTTGCACATTTCTGGACGATCGCTGGGGATTCCTTGCTAAATCTTGCTAAGAGCTCACTCTGGAGTGAGATAAACAGATGGGATTTGCCTGTGTCAGACCACTTGGAACTATACCGTATTGCAAAATACACATGTCCAAAGTGCTCATTGATGGATAAATTCGAAACTTATTCATTTCATGATCCAGTGAAGCATGCAGATTTTGAACATGCATCGAAGGAGTTTCTTGATTGTGTCACTAACCTAACACAAAAAGTTTGGTATTTTCTGGTTCAAGGTTGCCGCTATCTGGGACTTTGTAAGAATCCTATAGATTTTTGCTGGCTTGACACTTCAAAATATTCAAGTGAATGTGAAGTTCTTACTCAGTCTAAATGTGGGAATAAAGGAAGTTTTTCTGGAAGTGAAGCAGAGGAAGACACCAACCAGTTAAGGATATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SET

Protein Analysis

590

Amino Acids

65.86

Weight (kDa)

5.42

Isoelectric Point (pI)

50.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006147)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43245 AT1G43245
fragaria_vesca	FvH4_2g13430
malus_domestica	MD05G1027900.v1.1
prunus_persica	Prupe.8G033600_v2.0.a1 Prupe.8G033600_v2.0.a1
pyrus_communis	pycom05g02000
rosa_chinensis	RchiOBHm_Chr5g0050861 RchiOBHm_Chr6g0275051
rosa_laevigata	RLG00000013502
rosa_multiflora	Rmu_sc0000181.1_g000001 Rmu_sc0000447.1_g000003 Rmu_sc0020326.1_g000001
rosa_roxburghii	Rroxscaffold_7G00193730
rosa_rugosa	Rorug05G0264900.1 Rorug06G0087100 Rorug06G0087100
rosa_samantha	Rh5AG336700 Rh5BG346300 Rh5CG373900 Rh5CG374000 Rh5DG359200 Rh6AG202000 Rh6BG205500 Rh6CG207300 Rh6DG197300
rosa_wichuraiana	Rw6G017560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1271
Acc36I	ACCTGC	1 cut(s)	1271
AccB1I	GGYRCC	1 cut(s)	452
AccB7I	CCANNNNNTGG	1 cut(s)	964
AccBSI	CCGCTC	1 cut(s)	374
AccI	GTMKAC	1 cut(s)	954
AccII	CGCG	3 cut(s)	327, 447, 1259
AclWI	GGATC	2 cut(s)	626, 1505
AcoI	YGGCCR	2 cut(s)	574, 724
AcsI	RAATTY	3 cut(s)	441, 754, 1487
AcuI	CTGAAG	1 cut(s)	1230
AcyI	GRCGYC	3 cut(s)	453, 507, 701
AfaI	GTAC	3 cut(s)	599, 848, 1232
AfiI	CCNNNNNNNGG	3 cut(s)	964, 1162, 1618
AflIII	ACRYGT	1 cut(s)	1460
AgsI	TTSAA	7 cut(s)	991, 1024, 1201, 1535, 1604, 1665, 1674
AhdI	GACNNNNNGTC	1 cut(s)	1084
AjnI	CCWGG	4 cut(s)	455, 473, 534, 561
AluBI	AGCT	6 cut(s)	630, 1020, 1076, 1190, 1289, 1383
AluI	AGCT	6 cut(s)	630, 1020, 1076, 1190, 1289, 1383
Alw21I	GWGCWC	3 cut(s)	917, 1385, 1475
Alw26I	GTCTC	3 cut(s)	692, 822, 1023
AlwI	GGATC	2 cut(s)	626, 1505
AoxI	GGCC	3 cut(s)	391, 574, 724
ApeKI	GCWGC	2 cut(s)	706, 1286
ApoI	RAATTY	3 cut(s)	441, 754, 1487
Asp700I	GAANNNNTTC	1 cut(s)	1723
AspLEI	GCGC	5 cut(s)	254, 329, 455, 695, 1259
AspS9I	GGNCC	3 cut(s)	538, 559, 785
AsuHPI	GGTGA	3 cut(s)	930, 1205, 1283
AsuII	TTCGAA	1 cut(s)	1491
AvaII	GGWCC	3 cut(s)	538, 559, 785
BanI	GGYRCC	1 cut(s)	452
BanII	GRGCYC	1 cut(s)	1385
BbsI	GAAGAC	1 cut(s)	1752
Bbv12I	GWGCWC	3 cut(s)	917, 1385, 1475
BbvI	GCAGC	2 cut(s)	693, 1298
BccI	CCATC	5 cut(s)	7, 70, 1302, 1401, 1474
BceAI	ACGGC	6 cut(s)	322, 466, 494, 536, 655, 661
BciT130I	CCWGG	4 cut(s)	457, 475, 536, 563
BcoDI	GTCTC	3 cut(s)	692, 822, 1023
BfaI	CTAG	1 cut(s)	1319
BfmI	CTRYAG	2 cut(s)	1071, 1638
BfoI	RGCGCY	2 cut(s)	255, 456
BfuAI	ACCTGC	1 cut(s)	1271
BisI	GCNGC	9 cut(s)	330, 577, 683, 686, 704, 707, 1260, 1287, 1612
BlsI	GCNGC	9 cut(s)	331, 578, 684, 687, 705, 708, 1261, 1288, 1613
Bme1390I	CCNGG	4 cut(s)	457, 475, 536, 563
Bme18I	GGWCC	3 cut(s)	538, 559, 785
BmeRI	GACNNNNNGTC	1 cut(s)	1084
BmgT120I	GGNCC	3 cut(s)	538, 559, 785
BmiI	GGNNCC	1 cut(s)	454
BmrFI	CCNGG	4 cut(s)	457, 475, 536, 563
BmsI	GCATC	6 cut(s)	393, 816, 944, 1057, 1219, 1550
BoxI	GACNNNNGTC	1 cut(s)	950
BpiI	GAAGAC	1 cut(s)	1752
BpmI	CTGGAG	2 cut(s)	232, 1411
Bpu10I	CCTNAGC	1 cut(s)	492
Bpu14I	TTCGAA	1 cut(s)	1491
BpuEI	CTTGAG	1 cut(s)	1142
BsaAI	YACGTR	1 cut(s)	846
BsaHI	GRCGYC	3 cut(s)	453, 507, 701
BsaJI	CCNNGG	3 cut(s)	304, 456, 583
BsaXI	ACNNNNNCTCC	6 cut(s)	191, 221, 296, 326, 819, 849
Bsc4I	CCNNNNNNNGG	3 cut(s)	964, 1162, 1618
Bse118I	RCCGGY	1 cut(s)	722
Bse1I	ACTGG	4 cut(s)	577, 1199, 1514, 1756
Bse3DI	GCAATG	1 cut(s)	1205
BseBI	CCWGG	4 cut(s)	457, 475, 536, 563
BseDI	CCNNGG	3 cut(s)	304, 456, 583
BseLI	CCNNNNNNNGG	3 cut(s)	964, 1162, 1618
BseMI	GCAATG	1 cut(s)	1205
BseMII	CTCAG	4 cut(s)	424, 451, 506, 1709
BseNI	ACTGG	4 cut(s)	577, 1199, 1514, 1756
BseXI	GCAGC	2 cut(s)	693, 1298
BseYI	CCCAGC	1 cut(s)	1352
BsgI	GTGCAG	1 cut(s)	1305
Bsh1236I	CGCG	3 cut(s)	327, 447, 1259
Bsh1285I	CGRYCG	1 cut(s)	1350
BshFI	GGCC	3 cut(s)	393, 576, 726
BshNI	GGYRCC	1 cut(s)	452
BsiEI	CGRYCG	1 cut(s)	1350
BsiHKAI	GWGCWC	3 cut(s)	917, 1385, 1475
BsiSI	CCGG	2 cut(s)	390, 723
BslFI	GGGAC	3 cut(s)	500, 701, 1635
BslI	CCNNNNNNNGG	3 cut(s)	964, 1162, 1618
BsmAI	GTCTC	3 cut(s)	692, 822, 1023
BsmBI	CGTCTC	2 cut(s)	692, 822
BsmFI	GGGAC	3 cut(s)	500, 701, 1635
BsmI	GAATGC	1 cut(s)	776
BsnI	GGCC	3 cut(s)	393, 576, 726
Bsp119I	TTCGAA	1 cut(s)	1491
Bsp1286I	GDGCHC	3 cut(s)	917, 1385, 1475
Bsp143I	GATC	3 cut(s)	618, 1347, 1510
Bsp68I	TCGCGA	1 cut(s)	447
BspANI	GGCC	3 cut(s)	393, 576, 726
BspCNI	CTCAG	4 cut(s)	423, 450, 505, 1708
BspFNI	CGCG	3 cut(s)	327, 447, 1259
BspHI	TCATGA	1 cut(s)	1507
BspLI	GGNNCC	1 cut(s)	454
BspMI	ACCTGC	1 cut(s)	1271
BspPI	GGATC	2 cut(s)	626, 1505
BspQI	GCTCTTC	2 cut(s)	124, 381
BspT104I	TTCGAA	1 cut(s)	1491
BspT107I	GGYRCC	1 cut(s)	452
BsrBI	CCGCTC	1 cut(s)	374
BsrDI	GCAATG	1 cut(s)	1205
BsrFI	RCCGGY	1 cut(s)	722
BsrI	ACTGG	4 cut(s)	577, 1199, 1514, 1756
BssAI	RCCGGY	1 cut(s)	722
BssECI	CCNNGG	3 cut(s)	304, 456, 583
BssMI	GATC	3 cut(s)	618, 1347, 1510
BssNI	GRCGYC	3 cut(s)	453, 507, 701
Bst2UI	CCWGG	4 cut(s)	457, 475, 536, 563
Bst4CI	ACNGT	1 cut(s)	1445
Bst6I	CTCTTC	5 cut(s)	24, 124, 136, 381, 1000
BstACI	GRCGYC	3 cut(s)	453, 507, 701
BstBAI	YACGTR	1 cut(s)	846
BstBI	TTCGAA	1 cut(s)	1491
BstC8I	GCNNGC	6 cut(s)	646, 724, 1128, 1278, 1524, 1652
BstDEI	CTNAG	5 cut(s)	410, 437, 492, 1377, 1695
BstDSI	CCRYGG	1 cut(s)	304
BstFNI	CGCG	3 cut(s)	327, 447, 1259
BstH2I	RGCGCY	2 cut(s)	255, 456
BstHHI	GCGC	5 cut(s)	254, 329, 455, 695, 1259
BstKTI	GATC	3 cut(s)	621, 1350, 1513
BstMAI	GTCTC	3 cut(s)	692, 822, 1023
BstMBI	GATC	3 cut(s)	618, 1347, 1510
BstMCI	CGRYCG	1 cut(s)	1350
BstMWI	GCNNNNNNNGC	6 cut(s)	123, 390, 667, 682, 1256, 1286
BstNI	CCWGG	4 cut(s)	457, 475, 536, 563
BstNSI	RCATGY	3 cut(s)	1464, 1526, 1541
BstPAI	GACNNNNGTC	1 cut(s)	950
BstSCI	CCNGG	4 cut(s)	455, 473, 534, 561
BstSFI	CTRYAG	2 cut(s)	1071, 1638
BstSNI	TACGTA	1 cut(s)	846
BstUI	CGCG	3 cut(s)	327, 447, 1259
BstV1I	GCAGC	2 cut(s)	693, 1298
BstV2I	GAAGAC	1 cut(s)	1752
BsuRI	GGCC	3 cut(s)	393, 576, 726
BtgI	CCRYGG	1 cut(s)	304
BtsI	GCAGTG	3 cut(s)	112, 600, 695
BtsIMutI	CAGTG	6 cut(s)	112, 570, 600, 695, 849, 1521
BtuMI	TCGCGA	1 cut(s)	447
BveI	ACCTGC	1 cut(s)	1271
Cac8I	GCNNGC	6 cut(s)	646, 724, 1128, 1278, 1524, 1652
CciI	TCATGA	1 cut(s)	1507
CfoI	GCGC	5 cut(s)	254, 329, 455, 695, 1259
Cfr10I	RCCGGY	1 cut(s)	722
Cfr13I	GGNCC	3 cut(s)	538, 559, 785
CseI	GACGC	3 cut(s)	497, 515, 709
Csp6I	GTAC	3 cut(s)	598, 847, 1231
CviAII	CATG	7 cut(s)	194, 918, 959, 1461, 1508, 1523, 1538
CviQI	GTAC	3 cut(s)	598, 847, 1231
DdeI	CTNAG	5 cut(s)	410, 437, 492, 1377, 1695
DinI	GGCGCC	1 cut(s)	454
DpnI	GATC	3 cut(s)	620, 1349, 1512
DpnII	GATC	3 cut(s)	618, 1347, 1510
DriI	GACNNNNNGTC	1 cut(s)	1084
EaeI	YGGCCR	2 cut(s)	574, 724
Eam1104I	CTCTTC	5 cut(s)	24, 124, 136, 381, 1000
Eam1105I	GACNNNNNGTC	1 cut(s)	1084
EarI	CTCTTC	5 cut(s)	24, 124, 136, 381, 1000
EciI	GGCGGA	2 cut(s)	211, 326
Ecl136II	GAGCTC	1 cut(s)	1383
Eco105I	TACGTA	1 cut(s)	846
Eco24I	GRGCYC	1 cut(s)	1385
Eco32I	GATATC	2 cut(s)	973, 1767
Eco47I	GGWCC	3 cut(s)	538, 559, 785
Eco53kI	GAGCTC	1 cut(s)	1383
Eco57I	CTGAAG	1 cut(s)	1230
EcoICRI	GAGCTC	1 cut(s)	1383
EcoRI	GAATTC	1 cut(s)	441
EcoRII	CCWGG	4 cut(s)	455, 473, 534, 561
EcoRV	GATATC	2 cut(s)	973, 1767
EcoT22I	ATGCAT	1 cut(s)	1543
EcoT38I	GRGCYC	1 cut(s)	1385
EgeI	GGCGCC	1 cut(s)	454
EheI	GGCGCC	1 cut(s)	454
Esp3I	CGTCTC	2 cut(s)	692, 822
FaeI	CATG	7 cut(s)	197, 921, 962, 1464, 1511, 1526, 1541
FaqI	GGGAC	3 cut(s)	500, 701, 1635
FatI	CATG	7 cut(s)	193, 917, 958, 1460, 1507, 1522, 1537
FauI	CCCGC	6 cut(s)	364, 379, 389, 477, 727, 767
FblI	GTMKAC	1 cut(s)	954
Fnu4HI	GCNGC	9 cut(s)	330, 577, 683, 686, 704, 707, 1260, 1287, 1612
FriOI	GRGCYC	1 cut(s)	1385
Fsp4HI	GCNGC	9 cut(s)	330, 577, 683, 686, 704, 707, 1260, 1287, 1612
FspBI	CTAG	1 cut(s)	1319
GlaI	GCGC	5 cut(s)	253, 328, 454, 694, 1258
GluI	GCNGC	9 cut(s)	330, 577, 683, 686, 704, 707, 1260, 1287, 1612
GsaI	CCCAGC	1 cut(s)	1356
GsuI	CTGGAG	2 cut(s)	232, 1411
HaeII	RGCGCY	2 cut(s)	255, 456
HaeIII	GGCC	3 cut(s)	393, 576, 726
HapII	CCGG	2 cut(s)	390, 723
HgaI	GACGC	3 cut(s)	497, 515, 709
HhaI	GCGC	5 cut(s)	254, 329, 455, 695, 1259
Hin1I	GRCGYC	3 cut(s)	453, 507, 701
Hin1II	CATG	7 cut(s)	197, 921, 962, 1464, 1511, 1526, 1541
Hin6I	GCGC	5 cut(s)	252, 327, 453, 693, 1257
HinP1I	GCGC	5 cut(s)	252, 327, 453, 693, 1257
HincII	GTYRAC	2 cut(s)	762, 955
HindII	GTYRAC	2 cut(s)	762, 955
HpaI	GTTAAC	1 cut(s)	762
HpaII	CCGG	2 cut(s)	390, 723
HphI	GGTGA	3 cut(s)	930, 1205, 1283
Hpy166II	GTNNAC	6 cut(s)	199, 598, 762, 849, 955, 1233
Hpy8I	GTNNAC	6 cut(s)	199, 598, 762, 849, 955, 1233
Hpy99I	CGWCG	7 cut(s)	452, 503, 506, 509, 557, 676, 682
HpyAV	CCTTC	4 cut(s)	110, 275, 362, 1540
HpyCH4III	ACNGT	1 cut(s)	1445
HpyCH4IV	ACGT	1 cut(s)	845
HpyF10VI	GCNNNNNNNGC	6 cut(s)	123, 390, 667, 682, 1256, 1286
HpyF3I	CTNAG	5 cut(s)	410, 437, 492, 1377, 1695
HpySE526I	ACGT	1 cut(s)	845
Hsp92I	GRCGYC	3 cut(s)	453, 507, 701
Hsp92II	CATG	7 cut(s)	197, 921, 962, 1464, 1511, 1526, 1541
HspAI	GCGC	5 cut(s)	252, 327, 453, 693, 1257
KasI	GGCGCC	1 cut(s)	452
KroI	GCCGGC	1 cut(s)	722
KroNI	GCCGGC	1 cut(s)	724
KspAI	GTTAAC	1 cut(s)	762
Kzo9I	GATC	3 cut(s)	618, 1347, 1510
LguI	GCTCTTC	2 cut(s)	124, 381
LmnI	GCTCC	3 cut(s)	212, 224, 804
Lsp1109I	GCAGC	2 cut(s)	693, 1298
LweI	GCATC	6 cut(s)	393, 816, 944, 1057, 1219, 1550
MaeI	CTAG	1 cut(s)	1319
MaeII	ACGT	1 cut(s)	845
MaeIII	GTNAC	2 cut(s)	835, 1564
MalI	GATC	3 cut(s)	620, 1349, 1512
MbiI	CCGCTC	1 cut(s)	374
MboI	GATC	3 cut(s)	618, 1347, 1510
MboII	GAAGA	9 cut(s)	41, 111, 123, 368, 987, 1098, 1184, 1305, 1757
MfeI	CAATTG	1 cut(s)	1089
MhlI	GDGCHC	3 cut(s)	917, 1385, 1475
MluCI	AATT	9 cut(s)	184, 441, 588, 729, 754, 887, 985, 1089, 1487
Mly113I	GGCGCC	1 cut(s)	453
MlyI	GAGTC	2 cut(s)	89, 305
MmeI	TCCRAC	1 cut(s)	342
Mph1103I	ATGCAT	1 cut(s)	1543
MroNI	GCCGGC	1 cut(s)	722
MroXI	GAANNNNTTC	1 cut(s)	1723
MseI	TTAA	4 cut(s)	56, 761, 1302, 1760
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	630, 706
MspI	CCGG	2 cut(s)	390, 723
MspR9I	CCNGG	4 cut(s)	457, 475, 536, 563
MunI	CAATTG	1 cut(s)	1089
Mva1269I	GAATGC	1 cut(s)	776
MvaI	CCWGG	4 cut(s)	457, 475, 536, 563
MvnI	CGCG	3 cut(s)	327, 447, 1259
MwoI	GCNNNNNNNGC	6 cut(s)	123, 390, 667, 682, 1256, 1286
NaeI	GCCGGC	1 cut(s)	724
NarI	GGCGCC	1 cut(s)	453
NdeII	GATC	3 cut(s)	618, 1347, 1510
NgoMIV	GCCGGC	1 cut(s)	722
NlaIII	CATG	7 cut(s)	197, 921, 962, 1464, 1511, 1526, 1541
NlaIV	GGNNCC	1 cut(s)	454
NmeAIII	GCCGAG	2 cut(s)	280, 721
NmuCI	GTSAC	2 cut(s)	835, 1564
NruI	TCGCGA	1 cut(s)	447
NsiI	ATGCAT	1 cut(s)	1543
NspI	RCATGY	3 cut(s)	1464, 1526, 1541
NspV	TTCGAA	1 cut(s)	1491
PaeI	GCATGC	1 cut(s)	1526
PagI	TCATGA	1 cut(s)	1507
PaqCI	CACCTGC	1 cut(s)	1271
PciI	ACATGT	1 cut(s)	1460
PciSI	GCTCTTC	2 cut(s)	124, 381
PcsI	WCGNNNNNNNCGW	4 cut(s)	90, 495, 507, 674
PctI	GAATGC	1 cut(s)	776
PdiI	GCCGGC	1 cut(s)	724
PdmI	GAANNNNTTC	1 cut(s)	1723
PfeI	GAWTC	8 cut(s)	230, 414, 602, 816, 1103, 1310, 1358, 1633
PflFI	GACNNNGTC	1 cut(s)	833
PflMI	CCANNNNNTGG	1 cut(s)	964
PfoI	TCCNGGA	1 cut(s)	561
PkrI	GCNGC	9 cut(s)	331, 578, 684, 687, 705, 708, 1261, 1288, 1613
Ple19I	CGATCG	1 cut(s)	1350
PleI	GAGTC	2 cut(s)	89, 305
PluTI	GGCGCC	1 cut(s)	456
PpsI	GAGTC	2 cut(s)	89, 305
Ppu21I	YACGTR	1 cut(s)	846
PscI	ACATGT	1 cut(s)	1460
PshAI	GACNNNNGTC	1 cut(s)	950
Psp124BI	GAGCTC	1 cut(s)	1385
Psp6I	CCWGG	4 cut(s)	455, 473, 534, 561
PspFI	CCCAGC	1 cut(s)	1352
PspGI	CCWGG	4 cut(s)	455, 473, 534, 561
PspN4I	GGNNCC	1 cut(s)	454
PspPI	GGNCC	3 cut(s)	538, 559, 785
PsyI	GACNNNGTC	1 cut(s)	833
PvuI	CGATCG	1 cut(s)	1350
PvuII	CAGCTG	1 cut(s)	630
RruI	TCGCGA	1 cut(s)	447
RsaI	GTAC	3 cut(s)	599, 848, 1232
RsaNI	GTAC	3 cut(s)	598, 847, 1231
RseI	CAYNNNNRTG	1 cut(s)	429
SacI	GAGCTC	1 cut(s)	1385
SalI	GTCGAC	1 cut(s)	953
SapI	GCTCTTC	2 cut(s)	124, 381
SaqAI	TTAA	4 cut(s)	56, 761, 1302, 1760
SatI	GCNGC	9 cut(s)	330, 577, 683, 686, 704, 707, 1260, 1287, 1612
Sau3AI	GATC	3 cut(s)	618, 1347, 1510
Sau96I	GGNCC	3 cut(s)	538, 559, 785
SchI	GAGTC	2 cut(s)	89, 305
ScrFI	CCNGG	4 cut(s)	457, 475, 536, 563
SduI	GDGCHC	3 cut(s)	917, 1385, 1475
SfaNI	GCATC	6 cut(s)	393, 816, 944, 1057, 1219, 1550
SfcI	CTRYAG	2 cut(s)	1071, 1638
SfoI	GGCGCC	1 cut(s)	454
SfuI	TTCGAA	1 cut(s)	1491
SinI	GGWCC	3 cut(s)	538, 559, 785
SmiMI	CAYNNNNRTG	1 cut(s)	429
SmlI	CTYRAG	1 cut(s)	1121
SmoI	CTYRAG	1 cut(s)	1121
SnaBI	TACGTA	1 cut(s)	846
SphI	GCATGC	1 cut(s)	1526
Sse9I	AATT	9 cut(s)	184, 441, 588, 729, 754, 887, 985, 1089, 1487
SspDI	GGCGCC	1 cut(s)	452
SspI	AATATT	1 cut(s)	1670
SspMI	CTAG	1 cut(s)	1319
SstI	GAGCTC	1 cut(s)	1385
StyD4I	CCNGG	4 cut(s)	455, 473, 534, 561
TaaI	ACNGT	1 cut(s)	1445
TaiI	ACGT	1 cut(s)	848
TaqI	TCGA	4 cut(s)	555, 954, 1491, 1544
TasI	AATT	9 cut(s)	184, 441, 588, 729, 754, 887, 985, 1089, 1487
TauI	GCSGC	7 cut(s)	332, 579, 685, 688, 706, 1262, 1614
TfiI	GAWTC	8 cut(s)	230, 414, 602, 816, 1103, 1310, 1358, 1633
Tru1I	TTAA	4 cut(s)	56, 761, 1302, 1760
Tru9I	TTAA	4 cut(s)	56, 761, 1302, 1760
TscAI	CASTG	6 cut(s)	119, 577, 600, 695, 856, 1521
TseFI	GTSAC	2 cut(s)	835, 1564
TseI	GCWGC	2 cut(s)	706, 1286
Tsp45I	GTSAC	2 cut(s)	835, 1564
TspDTI	ATGAA	3 cut(s)	406, 1491, 1496
TspRI	CASTG	6 cut(s)	119, 577, 600, 695, 856, 1521
Tth111I	GACNNNGTC	1 cut(s)	833
Van91I	CCANNNNNTGG	1 cut(s)	964
VpaK11BI	GGWCC	3 cut(s)	538, 559, 785
XapI	RAATTY	3 cut(s)	441, 754, 1487
XceI	RCATGY	3 cut(s)	1464, 1526, 1541
XcmI	CCANNNNNNNNNTGG	2 cut(s)	569, 734
XmiI	GTMKAC	1 cut(s)	954
XmnI	GAANNNNTTC	1 cut(s)	1723
XspI	CTAG	1 cut(s)	1319
Zsp2I	ATGCAT	1 cut(s)	1543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.