Protein SET DOMAIN GROUP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G43245 AT1G43245 |
| fragaria_vesca | FvH4_2g13430 |
| malus_domestica | MD05G1027900.v1.1 |
| prunus_persica | Prupe.8G033600_v2.0.a1 Prupe.8G033600_v2.0.a1 |
| pyrus_communis | pycom05g02000 |
| rosa_chinensis | RchiOBHm_Chr5g0050861 RchiOBHm_Chr6g0275051 |
| rosa_laevigata | RLG00000013502 |
| rosa_multiflora | Rmu_sc0000181.1_g000001 Rmu_sc0000447.1_g000003 Rmu_sc0020326.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00193730 |
| rosa_rugosa | Rorug05G0264900.1 Rorug06G0087100 Rorug06G0087100 |
| rosa_samantha | Rh5AG336700 Rh5BG346300 Rh5CG373900 Rh5CG374000 Rh5DG359200 Rh6AG202000 Rh6BG205500 Rh6CG207300 Rh6DG197300 |
| rosa_wichuraiana | Rw6G017560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1180 |
| Acc36I | ACCTGC | 1 cut(s) | 1102 |
| AccB1I | GGYRCC | 1 cut(s) | 446 |
| AccI | GTMKAC | 2 cut(s) | 939, 1775 |
| AccII | CGCG | 2 cut(s) | 321, 441 |
| AclWI | GGATC | 2 cut(s) | 617, 1580 |
| AcoI | YGGCCR | 2 cut(s) | 565, 709 |
| AcsI | RAATTY | 4 cut(s) | 435, 739, 1562, 1892 |
| AcuI | CTGAAG | 1 cut(s) | 1215 |
| AcyI | GRCGYC | 3 cut(s) | 447, 498, 686 |
| AfaI | GTAC | 4 cut(s) | 590, 1116, 1217, 1783 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 949, 1147, 1693 |
| AgsI | TTSAA | 7 cut(s) | 976, 1009, 1278, 1610, 1679, 1740, 1749 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1069 |
| AjnI | CCWGG | 4 cut(s) | 449, 467, 525, 552 |
| AluBI | AGCT | 6 cut(s) | 621, 1005, 1061, 1310, 1364, 1458 |
| AluI | AGCT | 6 cut(s) | 621, 1005, 1061, 1310, 1364, 1458 |
| Alw21I | GWGCWC | 3 cut(s) | 902, 1460, 1550 |
| Alw26I | GTCTC | 2 cut(s) | 677, 1008 |
| AlwI | GGATC | 2 cut(s) | 617, 1580 |
| AoxI | GGCC | 3 cut(s) | 385, 565, 709 |
| ApeKI | GCWGC | 4 cut(s) | 691, 732, 1334, 1361 |
| ApoI | RAATTY | 4 cut(s) | 435, 739, 1562, 1892 |
| AspLEI | GCGC | 6 cut(s) | 248, 323, 449, 680, 1334, 1361 |
| AspS9I | GGNCC | 3 cut(s) | 529, 550, 770 |
| AsuC2I | CCSGG | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 3 cut(s) | 915, 1190, 1358 |
| AsuII | TTCGAA | 1 cut(s) | 1566 |
| AvaII | GGWCC | 3 cut(s) | 529, 550, 770 |
| BanI | GGYRCC | 1 cut(s) | 446 |
| BanII | GRGCYC | 1 cut(s) | 1460 |
| BbsI | GAAGAC | 1 cut(s) | 1836 |
| Bbv12I | GWGCWC | 3 cut(s) | 902, 1460, 1550 |
| BbvI | GCAGC | 4 cut(s) | 678, 744, 1346, 1373 |
| BccI | CCATC | 4 cut(s) | 64, 1377, 1476, 1549 |
| BceAI | ACGGC | 5 cut(s) | 316, 460, 485, 527, 646 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1174, 1208 |
| BciT130I | CCWGG | 4 cut(s) | 451, 469, 527, 554 |
| BcnI | CCSGG | 1 cut(s) | 365 |
| BcoDI | GTCTC | 2 cut(s) | 677, 1008 |
| BfmI | CTRYAG | 2 cut(s) | 1056, 1713 |
| BfoI | RGCGCY | 2 cut(s) | 249, 450 |
| BfuAI | ACCTGC | 1 cut(s) | 1102 |
| Bme1390I | CCNGG | 5 cut(s) | 365, 451, 469, 527, 554 |
| Bme18I | GGWCC | 3 cut(s) | 529, 550, 770 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1069 |
| BmgT120I | GGNCC | 3 cut(s) | 529, 550, 770 |
| BmiI | GGNNCC | 1 cut(s) | 448 |
| BmrFI | CCNGG | 5 cut(s) | 365, 451, 469, 527, 554 |
| BmsI | GCATC | 6 cut(s) | 387, 801, 929, 1042, 1204, 1625 |
| BpiI | GAAGAC | 1 cut(s) | 1836 |
| BpmI | CTGGAG | 2 cut(s) | 226, 1486 |
| Bpu10I | CCTNAGC | 1 cut(s) | 486 |
| Bpu14I | TTCGAA | 1 cut(s) | 1566 |
| BpuEI | CTTGAG | 1 cut(s) | 1127 |
| BpuMI | CCSGG | 1 cut(s) | 365 |
| BsaHI | GRCGYC | 3 cut(s) | 447, 498, 686 |
| BsaJI | CCNNGG | 4 cut(s) | 298, 363, 450, 574 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 290, 320 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 949, 1147, 1693 |
| Bse118I | RCCGGY | 2 cut(s) | 563, 707 |
| Bse1I | ACTGG | 4 cut(s) | 1184, 1589, 1783, 1840 |
| Bse3DI | GCAATG | 2 cut(s) | 1190, 1873 |
| BseBI | CCWGG | 4 cut(s) | 451, 469, 527, 554 |
| BseDI | CCNNGG | 4 cut(s) | 298, 363, 450, 574 |
| BseGI | GGATG | 1 cut(s) | 1854 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 949, 1147, 1693 |
| BseMI | GCAATG | 2 cut(s) | 1190, 1873 |
| BseMII | CTCAG | 4 cut(s) | 418, 445, 500, 1784 |
| BseNI | ACTGG | 4 cut(s) | 1184, 1589, 1783, 1840 |
| BseRI | GAGGAG | 9 cut(s) | 41, 57, 91, 126, 141, 260, 298, 326, 524 |
| BseX3I | CGGCCG | 1 cut(s) | 565 |
| BseXI | GCAGC | 4 cut(s) | 678, 744, 1346, 1373 |
| BseYI | CCCAGC | 1 cut(s) | 1427 |
| Bsh1236I | CGCG | 2 cut(s) | 321, 441 |
| Bsh1285I | CGRYCG | 3 cut(s) | 568, 943, 1425 |
| BshFI | GGCC | 3 cut(s) | 387, 567, 711 |
| BshNI | GGYRCC | 1 cut(s) | 446 |
| BsiEI | CGRYCG | 3 cut(s) | 568, 943, 1425 |
| BsiHKAI | GWGCWC | 3 cut(s) | 902, 1460, 1550 |
| BsiSI | CCGG | 4 cut(s) | 365, 384, 564, 708 |
| BslFI | GGGAC | 3 cut(s) | 494, 686, 1710 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 949, 1147, 1693 |
| BsmAI | GTCTC | 2 cut(s) | 677, 1008 |
| BsmBI | CGTCTC | 1 cut(s) | 677 |
| BsmFI | GGGAC | 3 cut(s) | 494, 686, 1710 |
| BsmI | GAATGC | 1 cut(s) | 761 |
| BsnI | GGCC | 3 cut(s) | 387, 567, 711 |
| Bsp119I | TTCGAA | 1 cut(s) | 1566 |
| Bsp1286I | GDGCHC | 3 cut(s) | 902, 1460, 1550 |
| Bsp143I | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| Bsp68I | TCGCGA | 1 cut(s) | 441 |
| BspANI | GGCC | 3 cut(s) | 387, 567, 711 |
| BspCNI | CTCAG | 4 cut(s) | 417, 444, 499, 1783 |
| BspFNI | CGCG | 2 cut(s) | 321, 441 |
| BspHI | TCATGA | 1 cut(s) | 1582 |
| BspLI | GGNNCC | 1 cut(s) | 448 |
| BspMI | ACCTGC | 1 cut(s) | 1102 |
| BspPI | GGATC | 2 cut(s) | 617, 1580 |
| BspQI | GCTCTTC | 2 cut(s) | 118, 375 |
| BspT104I | TTCGAA | 1 cut(s) | 1566 |
| BspT107I | GGYRCC | 1 cut(s) | 446 |
| BsrDI | GCAATG | 2 cut(s) | 1190, 1873 |
| BsrFI | RCCGGY | 2 cut(s) | 563, 707 |
| BsrI | ACTGG | 4 cut(s) | 1184, 1589, 1783, 1840 |
| BssAI | RCCGGY | 2 cut(s) | 563, 707 |
| BssECI | CCNNGG | 4 cut(s) | 298, 363, 450, 574 |
| BssMI | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| BssNI | GRCGYC | 3 cut(s) | 447, 498, 686 |
| Bst2UI | CCWGG | 4 cut(s) | 451, 469, 527, 554 |
| Bst4CI | ACNGT | 3 cut(s) | 944, 1520, 1790 |
| Bst6I | CTCTTC | 6 cut(s) | 18, 118, 130, 375, 985, 1959 |
| BstACI | GRCGYC | 3 cut(s) | 447, 498, 686 |
| BstBI | TTCGAA | 1 cut(s) | 1566 |
| BstC8I | GCNNGC | 7 cut(s) | 637, 709, 1353, 1357, 1599, 1727, 1903 |
| BstDEI | CTNAG | 5 cut(s) | 404, 431, 486, 1452, 1770 |
| BstDSI | CCRYGG | 1 cut(s) | 298 |
| BstF5I | GGATG | 1 cut(s) | 1854 |
| BstFNI | CGCG | 2 cut(s) | 321, 441 |
| BstH2I | RGCGCY | 2 cut(s) | 249, 450 |
| BstHHI | GCGC | 6 cut(s) | 248, 323, 449, 680, 1334, 1361 |
| BstKTI | GATC | 4 cut(s) | 612, 1425, 1588, 1960 |
| BstMAI | GTCTC | 2 cut(s) | 677, 1008 |
| BstMBI | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| BstMCI | CGRYCG | 3 cut(s) | 568, 943, 1425 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 117, 264, 384, 658, 667, 1329, 1361 |
| BstNI | CCWGG | 4 cut(s) | 451, 469, 527, 554 |
| BstNSI | RCATGY | 2 cut(s) | 1601, 1616 |
| BstSCI | CCNGG | 5 cut(s) | 363, 449, 467, 525, 552 |
| BstSFI | CTRYAG | 2 cut(s) | 1056, 1713 |
| BstUI | CGCG | 2 cut(s) | 321, 441 |
| BstV1I | GCAGC | 4 cut(s) | 678, 744, 1346, 1373 |
| BstV2I | GAAGAC | 1 cut(s) | 1836 |
| BstZI | CGGCCG | 1 cut(s) | 565 |
| BsuRI | GGCC | 3 cut(s) | 387, 567, 711 |
| BtgI | CCRYGG | 1 cut(s) | 298 |
| BtsCI | GGATG | 1 cut(s) | 1854 |
| BtsI | GCAGTG | 3 cut(s) | 106, 591, 680 |
| BtsIMutI | CAGTG | 5 cut(s) | 106, 591, 680, 834, 1596 |
| BtuMI | TCGCGA | 1 cut(s) | 441 |
| BveI | ACCTGC | 1 cut(s) | 1102 |
| Cac8I | GCNNGC | 7 cut(s) | 637, 709, 1353, 1357, 1599, 1727, 1903 |
| CciI | TCATGA | 1 cut(s) | 1582 |
| CfoI | GCGC | 6 cut(s) | 248, 323, 449, 680, 1334, 1361 |
| Cfr10I | RCCGGY | 2 cut(s) | 563, 707 |
| Cfr13I | GGNCC | 3 cut(s) | 529, 550, 770 |
| CseI | GACGC | 3 cut(s) | 491, 506, 694 |
| Csp6I | GTAC | 4 cut(s) | 589, 1115, 1216, 1782 |
| CviAII | CATG | 7 cut(s) | 188, 903, 1298, 1318, 1583, 1598, 1613 |
| CviQI | GTAC | 4 cut(s) | 589, 1115, 1216, 1782 |
| DdeI | CTNAG | 5 cut(s) | 404, 431, 486, 1452, 1770 |
| DinI | GGCGCC | 1 cut(s) | 448 |
| DpnI | GATC | 4 cut(s) | 611, 1424, 1587, 1959 |
| DpnII | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1180 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1069 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1180 |
| EaeI | YGGCCR | 2 cut(s) | 565, 709 |
| EagI | CGGCCG | 1 cut(s) | 565 |
| Eam1104I | CTCTTC | 6 cut(s) | 18, 118, 130, 375, 985, 1959 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1069 |
| EarI | CTCTTC | 6 cut(s) | 18, 118, 130, 375, 985, 1959 |
| EciI | GGCGGA | 3 cut(s) | 205, 254, 320 |
| Ecl136II | GAGCTC | 1 cut(s) | 1458 |
| EclXI | CGGCCG | 1 cut(s) | 565 |
| Eco24I | GRGCYC | 1 cut(s) | 1460 |
| Eco32I | GATATC | 1 cut(s) | 958 |
| Eco47I | GGWCC | 3 cut(s) | 529, 550, 770 |
| Eco52I | CGGCCG | 1 cut(s) | 565 |
| Eco53kI | GAGCTC | 1 cut(s) | 1458 |
| Eco57I | CTGAAG | 1 cut(s) | 1215 |
| EcoICRI | GAGCTC | 1 cut(s) | 1458 |
| EcoRI | GAATTC | 1 cut(s) | 435 |
| EcoRII | CCWGG | 4 cut(s) | 449, 467, 525, 552 |
| EcoRV | GATATC | 1 cut(s) | 958 |
| EcoT22I | ATGCAT | 1 cut(s) | 1618 |
| EcoT38I | GRGCYC | 1 cut(s) | 1460 |
| EgeI | GGCGCC | 1 cut(s) | 448 |
| EheI | GGCGCC | 1 cut(s) | 448 |
| Esp3I | CGTCTC | 1 cut(s) | 677 |
| FaeI | CATG | 7 cut(s) | 191, 906, 1301, 1321, 1586, 1601, 1616 |
| FaqI | GGGAC | 3 cut(s) | 494, 686, 1710 |
| FatI | CATG | 7 cut(s) | 187, 902, 1297, 1317, 1582, 1597, 1612 |
| FauI | CCCGC | 5 cut(s) | 358, 383, 471, 712, 752 |
| FauNDI | CATATG | 1 cut(s) | 1907 |
| FblI | GTMKAC | 2 cut(s) | 939, 1775 |
| FokI | GGATG | 1 cut(s) | 1861 |
| FriOI | GRGCYC | 1 cut(s) | 1460 |
| GlaI | GCGC | 6 cut(s) | 247, 322, 448, 679, 1333, 1360 |
| GsaI | CCCAGC | 1 cut(s) | 1431 |
| GsuI | CTGGAG | 2 cut(s) | 226, 1486 |
| HaeII | RGCGCY | 2 cut(s) | 249, 450 |
| HaeIII | GGCC | 3 cut(s) | 387, 567, 711 |
| HapII | CCGG | 4 cut(s) | 365, 384, 564, 708 |
| HgaI | GACGC | 3 cut(s) | 491, 506, 694 |
| HhaI | GCGC | 6 cut(s) | 248, 323, 449, 680, 1334, 1361 |
| Hin1I | GRCGYC | 3 cut(s) | 447, 498, 686 |
| Hin1II | CATG | 7 cut(s) | 191, 906, 1301, 1321, 1586, 1601, 1616 |
| Hin6I | GCGC | 6 cut(s) | 246, 321, 447, 678, 1332, 1359 |
| HinP1I | GCGC | 6 cut(s) | 246, 321, 447, 678, 1332, 1359 |
| HincII | GTYRAC | 3 cut(s) | 747, 940, 1173 |
| HindII | GTYRAC | 3 cut(s) | 747, 940, 1173 |
| HindIII | AAGCTT | 1 cut(s) | 1308 |
| HpaI | GTTAAC | 1 cut(s) | 747 |
| HpaII | CCGG | 4 cut(s) | 365, 384, 564, 708 |
| HphI | GGTGA | 3 cut(s) | 915, 1190, 1358 |
| Hpy166II | GTNNAC | 7 cut(s) | 193, 589, 747, 940, 1173, 1218, 1776 |
| Hpy8I | GTNNAC | 7 cut(s) | 193, 589, 747, 940, 1173, 1218, 1776 |
| Hpy99I | CGWCG | 6 cut(s) | 425, 446, 497, 500, 548, 667 |
| HpyAV | CCTTC | 3 cut(s) | 104, 269, 356 |
| HpyCH4III | ACNGT | 3 cut(s) | 944, 1520, 1790 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 117, 264, 384, 658, 667, 1329, 1361 |
| HpyF3I | CTNAG | 5 cut(s) | 404, 431, 486, 1452, 1770 |
| Hsp92I | GRCGYC | 3 cut(s) | 447, 498, 686 |
| Hsp92II | CATG | 7 cut(s) | 191, 906, 1301, 1321, 1586, 1601, 1616 |
| HspAI | GCGC | 6 cut(s) | 246, 321, 447, 678, 1332, 1359 |
| KasI | GGCGCC | 1 cut(s) | 446 |
| KroI | GCCGGC | 1 cut(s) | 707 |
| KroNI | GCCGGC | 1 cut(s) | 709 |
| KspAI | GTTAAC | 1 cut(s) | 747 |
| Kzo9I | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| LguI | GCTCTTC | 2 cut(s) | 118, 375 |
| LmnI | GCTCC | 3 cut(s) | 206, 218, 789 |
| Lsp1109I | GCAGC | 4 cut(s) | 678, 744, 1346, 1373 |
| LweI | GCATC | 6 cut(s) | 387, 801, 929, 1042, 1204, 1625 |
| MaeIII | GTNAC | 2 cut(s) | 820, 1639 |
| MalI | GATC | 4 cut(s) | 611, 1424, 1587, 1959 |
| MboI | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| MfeI | CAATTG | 1 cut(s) | 1074 |
| MhlI | GDGCHC | 3 cut(s) | 902, 1460, 1550 |
| Mly113I | GGCGCC | 1 cut(s) | 447 |
| MlyI | GAGTC | 4 cut(s) | 83, 299, 402, 1292 |
| MmeI | TCCRAC | 1 cut(s) | 336 |
| Mph1103I | ATGCAT | 1 cut(s) | 1618 |
| MroNI | GCCGGC | 1 cut(s) | 707 |
| MseI | TTAA | 6 cut(s) | 50, 746, 1262, 1377, 1649, 1844 |
| MslI | CAYNNNNRTG | 1 cut(s) | 423 |
| MspA1I | CMGCKG | 2 cut(s) | 621, 691 |
| MspI | CCGG | 4 cut(s) | 365, 384, 564, 708 |
| MspR9I | CCNGG | 5 cut(s) | 365, 451, 469, 527, 554 |
| MunI | CAATTG | 1 cut(s) | 1074 |
| Mva1269I | GAATGC | 1 cut(s) | 761 |
| MvaI | CCWGG | 4 cut(s) | 451, 469, 527, 554 |
| MvnI | CGCG | 2 cut(s) | 321, 441 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 117, 264, 384, 658, 667, 1329, 1361 |
| NaeI | GCCGGC | 1 cut(s) | 709 |
| NarI | GGCGCC | 1 cut(s) | 447 |
| NciI | CCSGG | 1 cut(s) | 365 |
| NdeI | CATATG | 1 cut(s) | 1907 |
| NdeII | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| NgoMIV | GCCGGC | 1 cut(s) | 707 |
| NlaIII | CATG | 7 cut(s) | 191, 906, 1301, 1321, 1586, 1601, 1616 |
| NlaIV | GGNNCC | 1 cut(s) | 448 |
| NmeAIII | GCCGAG | 2 cut(s) | 274, 706 |
| NmuCI | GTSAC | 2 cut(s) | 820, 1639 |
| NruI | TCGCGA | 1 cut(s) | 441 |
| NsiI | ATGCAT | 1 cut(s) | 1618 |
| NspI | RCATGY | 2 cut(s) | 1601, 1616 |
| NspV | TTCGAA | 1 cut(s) | 1566 |
| PaeI | GCATGC | 1 cut(s) | 1601 |
| PagI | TCATGA | 1 cut(s) | 1582 |
| PciSI | GCTCTTC | 2 cut(s) | 118, 375 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 84, 489, 498 |
| PctI | GAATGC | 1 cut(s) | 761 |
| PdiI | GCCGGC | 1 cut(s) | 709 |
| PfeI | GAWTC | 7 cut(s) | 224, 593, 801, 1088, 1385, 1433, 1708 |
| PfoI | TCCNGGA | 1 cut(s) | 552 |
| Ple19I | CGATCG | 1 cut(s) | 1425 |
| PleI | GAGTC | 4 cut(s) | 83, 299, 402, 1291 |
| PluTI | GGCGCC | 1 cut(s) | 450 |
| PpsI | GAGTC | 4 cut(s) | 83, 299, 402, 1291 |
| Psp124BI | GAGCTC | 1 cut(s) | 1460 |
| Psp6I | CCWGG | 4 cut(s) | 449, 467, 525, 552 |
| PspFI | CCCAGC | 1 cut(s) | 1427 |
| PspGI | CCWGG | 4 cut(s) | 449, 467, 525, 552 |
| PspN4I | GGNNCC | 1 cut(s) | 448 |
| PspPI | GGNCC | 3 cut(s) | 529, 550, 770 |
| PvuI | CGATCG | 1 cut(s) | 1425 |
| PvuII | CAGCTG | 1 cut(s) | 621 |
| RruI | TCGCGA | 1 cut(s) | 441 |
| RsaI | GTAC | 4 cut(s) | 590, 1116, 1217, 1783 |
| RsaNI | GTAC | 4 cut(s) | 589, 1115, 1216, 1782 |
| RseI | CAYNNNNRTG | 1 cut(s) | 423 |
| SacI | GAGCTC | 1 cut(s) | 1460 |
| SalI | GTCGAC | 1 cut(s) | 938 |
| SapI | GCTCTTC | 2 cut(s) | 118, 375 |
| SaqAI | TTAA | 6 cut(s) | 50, 746, 1262, 1377, 1649, 1844 |
| Sau3AI | GATC | 4 cut(s) | 609, 1422, 1585, 1957 |
| Sau96I | GGNCC | 3 cut(s) | 529, 550, 770 |
| SchI | GAGTC | 4 cut(s) | 83, 299, 402, 1292 |
| ScrFI | CCNGG | 5 cut(s) | 365, 451, 469, 527, 554 |
| SduI | GDGCHC | 3 cut(s) | 902, 1460, 1550 |
| SfaNI | GCATC | 6 cut(s) | 387, 801, 929, 1042, 1204, 1625 |
| SfcI | CTRYAG | 2 cut(s) | 1056, 1713 |
| SfoI | GGCGCC | 1 cut(s) | 448 |
| SfuI | TTCGAA | 1 cut(s) | 1566 |
| SinI | GGWCC | 3 cut(s) | 529, 550, 770 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 423 |
| SmlI | CTYRAG | 1 cut(s) | 1106 |
| SmoI | CTYRAG | 1 cut(s) | 1106 |
| SphI | GCATGC | 1 cut(s) | 1601 |
| SspDI | GGCGCC | 1 cut(s) | 446 |
| SspI | AATATT | 1 cut(s) | 1745 |
| SstI | GAGCTC | 1 cut(s) | 1460 |
| StyD4I | CCNGG | 5 cut(s) | 363, 449, 467, 525, 552 |
| TaaI | ACNGT | 3 cut(s) | 944, 1520, 1790 |
| TaqI | TCGA | 5 cut(s) | 546, 939, 1184, 1566, 1619 |
| TauI | GCSGC | 6 cut(s) | 326, 570, 670, 673, 691, 1689 |
| TfiI | GAWTC | 7 cut(s) | 224, 593, 801, 1088, 1385, 1433, 1708 |
| Tru1I | TTAA | 6 cut(s) | 50, 746, 1262, 1377, 1649, 1844 |
| Tru9I | TTAA | 6 cut(s) | 50, 746, 1262, 1377, 1649, 1844 |
| TscAI | CASTG | 5 cut(s) | 113, 591, 680, 841, 1596 |
| TseFI | GTSAC | 2 cut(s) | 820, 1639 |
| TseI | GCWGC | 4 cut(s) | 691, 732, 1334, 1361 |
| Tsp45I | GTSAC | 2 cut(s) | 820, 1639 |
| TspDTI | ATGAA | 4 cut(s) | 1170, 1566, 1571, 1934 |
| TspRI | CASTG | 5 cut(s) | 113, 591, 680, 841, 1596 |
| VpaK11BI | GGWCC | 3 cut(s) | 529, 550, 770 |
| XapI | RAATTY | 4 cut(s) | 435, 739, 1562, 1892 |
| XceI | RCATGY | 2 cut(s) | 1601, 1616 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 719 |
| XmiI | GTMKAC | 2 cut(s) | 939, 1775 |
| Zsp2I | ATGCAT | 1 cut(s) | 1618 |