Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000466.1

Orthogroup ID

OG0008791

Physical Location & Seq

Genomic Coordinates Forward (+)

3859 .. 7772

Gene Structure 3914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000466.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

atggcttcgattatcggagtttcctctatatactaccagactccatgtgagttgtataaaagagctgccgcgcctgtagctaccacgacggccccgacgacgagcagtggcggcggcggcggtgtttcgctggcttttccggagaggcagagggcgcacttcaacagtgttttgagagcgaggagtgttttcgctactcaggcgattgcgacgcccaattctgtgctcagtgaagaggccttcaaggggctaggggacttttcgaagggggagctggactcggagtcggagtatgagtcggagagtgatgtggttgagccggttagtaaagacgagctggctctttcgaaattgggcctgcctcagcggcttgcggatagtcttgagaggcgtggcatttcttcgctttttcccattcagagagctgtgctagtgccggcactggaaggtcgagacatcatagctcgtgcaaagactgggactgggaagacattggcctttgggattcccatacttaaacgccttacagaagatgatgaacagagaggttcaaggcggtctggttatcttcctagagttctggtccttgcacctactcgggagttagcgaagcaagtggacaaggagattaaagaatctgcaccttatctgaacactgtttgcgtctatggaggagtttcatatgtaacgcaacagagtgctctttctcgtggggttgacgtagtggttggaactcctggtcggcttattgacctgataaacggcggcagcctcaagttgggtgaagttcaatatttggtacttgatgaagctgatcagatgcttgctgttggatttgaggaagatgtggaaacaattctacaaaggctcccagctcagaggcagagcatgcttttttctgcaactatgcccacttgggtgaaaaaactagcacgaaaatatttggacaatccattgacgattgatttggttggtgatcaagatgagaagcttgcagaagggatcaaactctatgctctatcaaccacaaactcttcaaagcggactattcttagtgatcttataacagtttatgcaaagggtgggaagaccattgtttttacacaaacgaaacgtgatgctgatgaagtgtcaatgtcattgacgactagcatagcttctgaggcattgcatggagatatatcacaacatcaaagggagagaacccttaatggttttcggcaaggaaaattcactgtgctcgttgccactgatgttgcatcccgtggacttgatattcccaacgttgacttggttatccactatgaacttcccaatgattcagagacatttgtacatcgctctggtcgtactggacgtgcagggaaactcggtaatgccgttctgatgtttactaataaccagaggagaacagtcaaaactcttgagcgtgatgtggggtgcaggtttgagtttgttactccgccaaccgttgaggaggttttggagtcatctgcttcacatgtggttgctactctcaatggggttcatcctgaatccatacagttttttacaccaacggcacagagactgattgaagaacagggaacaactgctcttgctgctgcactggcacagctaagtggattttcccgacctccgtcatcccggtctctaatcagtcatgagccggggtggacgacattgcaaataattcgggatccagcttttgccagaggttacctgtctgctagatctgtcactgggtttctttcagatgtttattctgcagctgctgatgaacttggaaaaatatatttaattgcagatgaaagggttcaaggagcagtttttgatcttccagaggagattgcaaaagagttgctgaagaggcaaatacctcctggaaacagtatttccaagatcagcaagttgcctcctctgcaagatgacgggccagtgagtgacaactatggcaggttttcagctagggatcggagtagtcgacggggaagttttagtagtggacggggaggtagtgggggacggggaggttttagaagtagctctaggggtggatggggaggcggccgaggttctagtgatggtgatgatgattttaggagtagcagaggaagttttaatagatctagcagcagccgacctcggatgacaagaagtatggatgatgattggcttattggaggtacacgaacaggcagaataccaccacgagacaggtatgtcatctgcaagtcaaataattttcttgcaattgaaggtgctttcagaatttcaaactcatcaatcaatttacattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010467 GO:0010501 GO:0016020 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022613 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0034641 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD GUCT Helicase_C zf-CCHC

Protein Analysis

766

Amino Acids

83.16

Weight (kDa)

8.75

Isoelectric Point (pI)

42.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26742 AT5G26742 AT5G26742
fragaria_vesca	FvH4_6g08810 FvH4_6g08810 FvH4_6g08810 FvH4_6g08810
malus_domestica	MD04G1183400.v1.1 MD12G1196800.v1.1
prunus_persica	Prupe.6G301900_v2.0.a1
pyrus_communis	pycom04g16190 pycom12g18300
rosa_chinensis	RchiOBHm_Chr3g0459081
rosa_laevigata	RLG00000025121
rosa_multiflora	Rmu_sc0000466.1_g000002 Rmu_sc0003515.1_g000001
rosa_roxburghii	Rroxscaffold_6G00420530
rosa_rugosa	Rorug03G0033400
rosa_samantha	Rh3AG091300 Rh3BG094400 Rh3CG094800 Rh3DG094800
rosa_wichuraiana	Rw3G007840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1064
AasI	GACNNNNNNGTC	1 cut(s)	2222
Acc36I	ACCTGC	2 cut(s)	1434, 1947
AccI	GTMKAC	1 cut(s)	1984
AccII	CGCG	1 cut(s)	71
AccIII	TCCGGA	1 cut(s)	139
AclI	AACGTT	1 cut(s)	1284
AclWI	GGATC	4 cut(s)	1010, 1694, 1707, 1980
AcoI	YGGCCR	1 cut(s)	2068
AcsI	RAATTY	2 cut(s)	1229, 2271
AcuI	CTGAAG	1 cut(s)	1886
AcyI	GRCGYC	1 cut(s)	212
AfaI	GTAC	4 cut(s)	801, 1335, 1351, 2188
AfiI	CCNNNNNNNGG	2 cut(s)	246, 778
AflIII	ACRYGT	1 cut(s)	1501
AgsI	TTSAA	9 cut(s)	163, 244, 552, 791, 1038, 1577, 1820, 2258, 2277
AhdI	GACNNNNNGTC	1 cut(s)	283
AjiI	CACGTC	1 cut(s)	1358
AjnI	CCWGG	2 cut(s)	736, 1882
AleI	CACNNNNGTG	1 cut(s)	917
Alw21I	GWGCWC	3 cut(s)	228, 703, 1242
Alw26I	GTCTC	5 cut(s)	447, 1319, 1561, 1656, 2208
AlwI	GGATC	4 cut(s)	1010, 1694, 1707, 1980
AlwNI	CAGNNNCTG	2 cut(s)	1570, 1775
Ama87I	CYCGRG	1 cut(s)	597
Aor13HI	TCCGGA	1 cut(s)	139
AoxI	GGCC	6 cut(s)	90, 237, 355, 495, 1934, 2068
ApeKI	GCWGC	8 cut(s)	65, 768, 1601, 1604, 1769, 1772, 2133, 2136
ApoI	RAATTY	2 cut(s)	1229, 2271
ArsI	GACNNNNNNTTYG	2 cut(s)	949, 981
Asp700I	GAANNNNTTC	2 cut(s)	855, 1815
AspLEI	GCGC	2 cut(s)	73, 157
AspS9I	GGNCC	4 cut(s)	91, 355, 583, 1934
AsuC2I	CCSGG	2 cut(s)	1648, 1671
AsuHPI	GGTGA	4 cut(s)	794, 931, 986, 2099
AsuII	TTCGAA	2 cut(s)	263, 347
AvaI	CYCGRG	1 cut(s)	597
AvaII	GGWCC	1 cut(s)	583
BamHI	GGATCC	1 cut(s)	1699
BauI	CACGAG	3 cut(s)	465, 708, 2211
BbsI	GAAGAC	2 cut(s)	494, 1094
Bbv12I	GWGCWC	3 cut(s)	228, 703, 1242
BbvCI	CCTCAGC	1 cut(s)	363
BbvI	GCAGC	8 cut(s)	52, 780, 1588, 1591, 1759, 1781, 2145, 2148
BccI	CCATC	2 cut(s)	2052, 2078
BceAI	ACGGC	4 cut(s)	105, 778, 1364, 1575
BcgI	CGANNNNNNTGC	2 cut(s)	1676, 1710
BciT130I	CCWGG	2 cut(s)	738, 1884
BclI	TGATCA	2 cut(s)	814, 976
BcnI	CCSGG	2 cut(s)	1648, 1671
BcoDI	GTCTC	5 cut(s)	447, 1319, 1561, 1656, 2208
BfmI	CTRYAG	2 cut(s)	75, 1767
BfuAI	ACCTGC	2 cut(s)	1434, 1947
BglI	GCCNNNNNGGC	1 cut(s)	367
BglII	AGATCT	2 cut(s)	1733, 2126
Bme1390I	CCNGG	4 cut(s)	738, 1648, 1671, 1884
Bme18I	GGWCC	1 cut(s)	583
BmeRI	GACNNNNNGTC	1 cut(s)	283
BmeT110I	CYCGRG	1 cut(s)	597
BmgBI	CACGTC	1 cut(s)	1358
BmgT120I	GGNCC	4 cut(s)	91, 355, 583, 1934
BmiI	GGNNCC	3 cut(s)	93, 869, 1701
BmrFI	CCNGG	4 cut(s)	738, 1648, 1671, 1884
BmrI	ACTGGG	3 cut(s)	486, 492, 1752
BmsI	GCATC	3 cut(s)	810, 1108, 1268
BmuI	ACTGGG	3 cut(s)	486, 492, 1752
BoxI	GACNNNNGTC	1 cut(s)	1639
BpiI	GAAGAC	2 cut(s)	494, 1094
BplI	GAGNNNNNCTC	2 cut(s)	263, 295
Bpu10I	CCTNAGC	1 cut(s)	363
Bpu14I	TTCGAA	2 cut(s)	263, 347
BpuEI	CTTGAG	3 cut(s)	404, 758, 1445
BpuMI	CCSGG	2 cut(s)	1648, 1671
BsaHI	GRCGYC	1 cut(s)	212
BsaI	GGTCTC	1 cut(s)	1656
BsaJI	CCNNGG	4 cut(s)	1264, 1670, 2071, 2144
BsaWI	WCCGGW	1 cut(s)	139
BsaXI	ACNNNNNCTCC	6 cut(s)	275, 281, 305, 311, 852, 882
Bsc4I	CCNNNNNNNGG	2 cut(s)	246, 778
Bse118I	RCCGGY	2 cut(s)	319, 436
Bse1I	ACTGG	7 cut(s)	447, 481, 487, 1357, 1614, 1747, 1937
Bse3DI	GCAATG	2 cut(s)	1166, 1682
BseAI	TCCGGA	1 cut(s)	139
BseBI	CCWGG	2 cut(s)	738, 1884
BseDI	CCNNGG	4 cut(s)	1264, 1670, 2071, 2144
BseGI	GGATG	6 cut(s)	1259, 1528, 1643, 2063, 2154, 2170
BseLI	CCNNNNNNNGG	2 cut(s)	246, 778
BseMI	GCAATG	2 cut(s)	1166, 1682
BseMII	CTCAG	5 cut(s)	212, 241, 377, 890, 1152
BseNI	ACTGG	7 cut(s)	447, 481, 487, 1357, 1614, 1747, 1937
BseRI	GAGGAG	6 cut(s)	196, 687, 1420, 1490, 1859, 1908
BseX3I	CGGCCG	1 cut(s)	2068
BseXI	GCAGC	8 cut(s)	52, 780, 1588, 1591, 1759, 1781, 2145, 2148
BseYI	CCCAGC	1 cut(s)	871
BsgI	GTGCAG	4 cut(s)	624, 1380, 1462, 1590
Bsh1236I	CGCG	1 cut(s)	71
Bsh1285I	CGRYCG	1 cut(s)	2071
BshFI	GGCC	6 cut(s)	92, 239, 357, 497, 1936, 2070
BsiEI	CGRYCG	1 cut(s)	2071
BsiHKAI	GWGCWC	3 cut(s)	228, 703, 1242
BsiHKCI	CYCGRG	1 cut(s)	597
BsiSI	CCGG	5 cut(s)	140, 320, 437, 1648, 1670
BslFI	GGGAC	3 cut(s)	269, 493, 2037
BslI	CCNNNNNNNGG	2 cut(s)	246, 778
BsmAI	GTCTC	5 cut(s)	447, 1319, 1561, 1656, 2208
BsmFI	GGGAC	3 cut(s)	269, 493, 2037
BsnI	GGCC	6 cut(s)	92, 239, 357, 497, 1936, 2070
Bso31I	GGTCTC	1 cut(s)	1656
BsoBI	CYCGRG	1 cut(s)	597
Bsp119I	TTCGAA	2 cut(s)	263, 347
Bsp1286I	GDGCHC	3 cut(s)	228, 703, 1242
Bsp13I	TCCGGA	1 cut(s)	139
Bsp1407I	TGTACA	1 cut(s)	1333
BspANI	GGCC	6 cut(s)	92, 239, 357, 497, 1936, 2070
BspCNI	CTCAG	5 cut(s)	211, 240, 376, 889, 1153
BspEI	TCCGGA	1 cut(s)	139
BspFNI	CGCG	1 cut(s)	71
BspHI	TCATGA	1 cut(s)	1663
BspLI	GGNNCC	3 cut(s)	93, 869, 1701
BspMAI	CTGCAG	1 cut(s)	1771
BspMI	ACCTGC	2 cut(s)	1434, 1947
BspPI	GGATC	4 cut(s)	1010, 1694, 1707, 1980
BspT104I	TTCGAA	2 cut(s)	263, 347
BspTNI	GGTCTC	1 cut(s)	1656
BsrDI	GCAATG	2 cut(s)	1166, 1682
BsrFI	RCCGGY	2 cut(s)	319, 436
BsrGI	TGTACA	1 cut(s)	1333
BsrI	ACTGG	7 cut(s)	447, 481, 487, 1357, 1614, 1747, 1937
BssAI	RCCGGY	2 cut(s)	319, 436
BssECI	CCNNGG	4 cut(s)	1264, 1670, 2071, 2144
BssNI	GRCGYC	1 cut(s)	212
BssSI	CACGAG	3 cut(s)	465, 708, 2211
Bst2BI	CACGAG	3 cut(s)	465, 708, 2211
Bst2UI	CCWGG	2 cut(s)	738, 1884
Bst4CI	ACNGT	8 cut(s)	167, 658, 1069, 1237, 1414, 1471, 1545, 1892
Bst6I	CTCTTC	3 cut(s)	228, 1039, 1862
BstACI	GRCGYC	1 cut(s)	212
BstAPI	GCANNNNNTGC	1 cut(s)	889
BstAUI	TGTACA	1 cut(s)	1333
BstBI	TTCGAA	2 cut(s)	263, 347
BstC8I	GCNNGC	8 cut(s)	132, 339, 359, 372, 438, 825, 890, 993
BstDEI	CTNAG	7 cut(s)	198, 227, 363, 876, 1052, 1161, 1619
BstDSI	CCRYGG	1 cut(s)	1264
BstEII	GGTNACC	1 cut(s)	1718
BstF5I	GGATG	6 cut(s)	1259, 1528, 1643, 2063, 2154, 2170
BstFNI	CGCG	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	73, 157
BstMAI	GTCTC	5 cut(s)	447, 1319, 1561, 1656, 2208
BstMCI	CGRYCG	1 cut(s)	2071
BstNI	CCWGG	2 cut(s)	738, 1884
BstNSI	RCATGY	2 cut(s)	892, 1505
BstPAI	GACNNNNGTC	1 cut(s)	1639
BstPI	GGTNACC	1 cut(s)	1718
BstSCI	CCNGG	4 cut(s)	736, 1646, 1669, 1882
BstSFI	CTRYAG	2 cut(s)	75, 1767
BstUI	CGCG	1 cut(s)	71
BstV1I	GCAGC	8 cut(s)	52, 780, 1588, 1591, 1759, 1781, 2145, 2148
BstV2I	GAAGAC	2 cut(s)	494, 1094
BstX2I	RGATCY	3 cut(s)	1699, 1733, 2126
BstYI	RGATCY	3 cut(s)	1699, 1733, 2126
BstZI	CGGCCG	1 cut(s)	2068
BsuRI	GGCC	6 cut(s)	92, 239, 357, 497, 1936, 2070
BtgI	CCRYGG	1 cut(s)	1264
BtgZI	GCGATG	1 cut(s)	1322
BtrI	CACGTC	1 cut(s)	1358
BtsCI	GGATG	6 cut(s)	1259, 1528, 1643, 2063, 2154, 2170
BtsI	GCAGTG	1 cut(s)	112
BveI	ACCTGC	2 cut(s)	1434, 1947
Cac8I	GCNNGC	8 cut(s)	132, 339, 359, 372, 438, 825, 890, 993
CaiI	CAGNNNCTG	2 cut(s)	1570, 1775
CciI	TCATGA	1 cut(s)	1663
CfoI	GCGC	2 cut(s)	73, 157
Cfr10I	RCCGGY	2 cut(s)	319, 436
Cfr13I	GGNCC	4 cut(s)	91, 355, 583, 1934
CseI	GACGC	2 cut(s)	220, 652
Csp6I	GTAC	4 cut(s)	800, 1334, 1350, 2187
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviAII	CATG	5 cut(s)	45, 889, 1172, 1502, 1664
CviQI	GTAC	4 cut(s)	800, 1334, 1350, 2187
DdeI	CTNAG	7 cut(s)	198, 227, 363, 876, 1052, 1161, 1619
DrdI	GACNNNNNNGTC	1 cut(s)	2222
DriI	GACNNNNNGTC	1 cut(s)	283
DseDI	GACNNNNNNGTC	1 cut(s)	2222
EaeI	YGGCCR	1 cut(s)	2068
EagI	CGGCCG	1 cut(s)	2068
Eam1104I	CTCTTC	3 cut(s)	228, 1039, 1862
Eam1105I	GACNNNNNGTC	1 cut(s)	283
EarI	CTCTTC	3 cut(s)	228, 1039, 1862
EciI	GGCGGA	1 cut(s)	1452
EclXI	CGGCCG	1 cut(s)	2068
Eco147I	AGGCCT	1 cut(s)	239
Eco31I	GGTCTC	1 cut(s)	1656
Eco47I	GGWCC	1 cut(s)	583
Eco52I	CGGCCG	1 cut(s)	2068
Eco57I	CTGAAG	1 cut(s)	1886
Eco88I	CYCGRG	1 cut(s)	597
Eco91I	GGTNACC	1 cut(s)	1718
EcoO65I	GGTNACC	1 cut(s)	1718
EcoRII	CCWGG	2 cut(s)	736, 1882
FaeI	CATG	5 cut(s)	48, 892, 1175, 1505, 1667
FaqI	GGGAC	3 cut(s)	269, 493, 2037
FatI	CATG	5 cut(s)	44, 888, 1171, 1501, 1663
FauNDI	CATATG	1 cut(s)	682
FbaI	TGATCA	2 cut(s)	814, 976
FblI	GTMKAC	1 cut(s)	1984
FokI	GGATG	6 cut(s)	1246, 1515, 1630, 2070, 2161, 2177
GlaI	GCGC	2 cut(s)	72, 156
GsaI	CCCAGC	1 cut(s)	875
HaeIII	GGCC	6 cut(s)	92, 239, 357, 497, 1936, 2070
HapII	CCGG	5 cut(s)	140, 320, 437, 1648, 1670
HgaI	GACGC	2 cut(s)	220, 652
HhaI	GCGC	2 cut(s)	73, 157
Hin1I	GRCGYC	1 cut(s)	212
Hin1II	CATG	5 cut(s)	48, 892, 1175, 1505, 1667
Hin6I	GCGC	2 cut(s)	71, 155
HinP1I	GCGC	2 cut(s)	71, 155
HincII	GTYRAC	3 cut(s)	718, 1288, 1985
HindII	GTYRAC	3 cut(s)	718, 1288, 1985
HindIII	AAGCTT	1 cut(s)	989
HinfI	GANTC	9 cut(s)	40, 278, 284, 296, 505, 635, 1319, 1487, 1535
HpaII	CCGG	5 cut(s)	140, 320, 437, 1648, 1670
HphI	GGTGA	4 cut(s)	794, 931, 986, 2099
Hpy166II	GTNNAC	9 cut(s)	619, 718, 1268, 1288, 1392, 1677, 1985, 2006, 2189
Hpy8I	GTNNAC	9 cut(s)	619, 718, 1268, 1288, 1392, 1677, 1985, 2006, 2189
Hpy99I	CGWCG	5 cut(s)	91, 100, 103, 214, 1989
HpyAV	CCTTC	5 cut(s)	250, 259, 440, 992, 2252
HpyCH4III	ACNGT	8 cut(s)	167, 658, 1069, 1237, 1414, 1471, 1545, 1892
HpyCH4IV	ACGT	4 cut(s)	720, 1114, 1284, 1357
HpyF3I	CTNAG	7 cut(s)	198, 227, 363, 876, 1052, 1161, 1619
HpySE526I	ACGT	4 cut(s)	720, 1114, 1284, 1357
Hsp92I	GRCGYC	1 cut(s)	212
Hsp92II	CATG	5 cut(s)	48, 892, 1175, 1505, 1667
HspAI	GCGC	2 cut(s)	71, 155
Kpn2I	TCCGGA	1 cut(s)	139
KroI	GCCGGC	1 cut(s)	436
KroNI	GCCGGC	1 cut(s)	438
Ksp22I	TGATCA	2 cut(s)	814, 976
LmnI	GCTCC	3 cut(s)	271, 873, 1823
Lsp1109I	GCAGC	8 cut(s)	52, 780, 1588, 1591, 1759, 1781, 2145, 2148
LweI	GCATC	3 cut(s)	810, 1108, 1268
MaeII	ACGT	4 cut(s)	720, 1114, 1284, 1357
MaeIII	GTNAC	5 cut(s)	685, 1456, 1718, 1738, 1943
MfeI	CAATTG	1 cut(s)	2253
MflI	RGATCY	3 cut(s)	1699, 1733, 2126
MhlI	GDGCHC	3 cut(s)	228, 703, 1242
MlyI	GAGTC	5 cut(s)	34, 272, 293, 305, 1496
MmeI	TCCRAC	4 cut(s)	267, 279, 709, 811
MroI	TCCGGA	1 cut(s)	139
MroNI	GCCGGC	1 cut(s)	436
MroXI	GAANNNNTTC	2 cut(s)	855, 1815
MseI	TTAA	5 cut(s)	516, 630, 1209, 1799, 2121
MslI	CAYNNNNRTG	1 cut(s)	917
MspA1I	CMGCKG	2 cut(s)	367, 1772
MspI	CCGG	5 cut(s)	140, 320, 437, 1648, 1670
MspR9I	CCNGG	4 cut(s)	738, 1648, 1671, 1884
MunI	CAATTG	1 cut(s)	2253
MvaI	CCWGG	2 cut(s)	738, 1884
MvnI	CGCG	1 cut(s)	71
NaeI	GCCGGC	1 cut(s)	438
NciI	CCSGG	2 cut(s)	1648, 1671
NdeI	CATATG	1 cut(s)	682
NgoMIV	GCCGGC	1 cut(s)	436
NlaIII	CATG	5 cut(s)	48, 892, 1175, 1505, 1667
NlaIV	GGNNCC	3 cut(s)	93, 869, 1701
NmeAIII	GCCGAG	1 cut(s)	2096
NmuCI	GTSAC	2 cut(s)	1738, 1943
NspI	RCATGY	2 cut(s)	892, 1505
NspV	TTCGAA	2 cut(s)	263, 347
OliI	CACNNNNGTG	1 cut(s)	917
PaeI	GCATGC	1 cut(s)	892
PagI	TCATGA	1 cut(s)	1663
PceI	AGGCCT	1 cut(s)	239
PciI	ACATGT	1 cut(s)	1501
PcsI	WCGNNNNNNNCGW	6 cut(s)	92, 95, 1345, 1354, 1377, 1981
PdiI	GCCGGC	1 cut(s)	438
PdmI	GAANNNNTTC	2 cut(s)	855, 1815
PfeI	GAWTC	4 cut(s)	505, 635, 1319, 1535
PfoI	TCCNGGA	1 cut(s)	1882
PleI	GAGTC	5 cut(s)	34, 272, 292, 304, 1495
PpsI	GAGTC	5 cut(s)	34, 272, 292, 304, 1495
PscI	ACATGT	1 cut(s)	1501
PshAI	GACNNNNGTC	1 cut(s)	1639
PsiI	TTATAA	1 cut(s)	1064
Psp1406I	AACGTT	1 cut(s)	1284
Psp6I	CCWGG	2 cut(s)	736, 1882
PspEI	GGTNACC	1 cut(s)	1718
PspFI	CCCAGC	1 cut(s)	871
PspGI	CCWGG	2 cut(s)	736, 1882
PspN4I	GGNNCC	3 cut(s)	93, 869, 1701
PspPI	GGNCC	4 cut(s)	91, 355, 583, 1934
PstI	CTGCAG	1 cut(s)	1771
PstNI	CAGNNNCTG	2 cut(s)	1570, 1775
PsuI	RGATCY	3 cut(s)	1699, 1733, 2126
PvuII	CAGCTG	1 cut(s)	1772
RsaI	GTAC	4 cut(s)	801, 1335, 1351, 2188
RsaNI	GTAC	4 cut(s)	800, 1334, 1350, 2187
RseI	CAYNNNNRTG	1 cut(s)	917
SalI	GTCGAC	1 cut(s)	1983
SaqAI	TTAA	5 cut(s)	516, 630, 1209, 1799, 2121
Sau96I	GGNCC	4 cut(s)	91, 355, 583, 1934
SchI	GAGTC	5 cut(s)	34, 272, 293, 305, 1496
ScrFI	CCNGG	4 cut(s)	738, 1648, 1671, 1884
SduI	GDGCHC	3 cut(s)	228, 703, 1242
SfaNI	GCATC	3 cut(s)	810, 1108, 1268
SfcI	CTRYAG	2 cut(s)	75, 1767
SfuI	TTCGAA	2 cut(s)	263, 347
SinI	GGWCC	1 cut(s)	583
SmiMI	CAYNNNNRTG	1 cut(s)	917
SmlI	CTYRAG	3 cut(s)	383, 773, 1424
SmoI	CTYRAG	3 cut(s)	383, 773, 1424
SphI	GCATGC	1 cut(s)	892
SseBI	AGGCCT	1 cut(s)	239
SspI	AATATT	2 cut(s)	794, 941
StuI	AGGCCT	1 cut(s)	239
StyD4I	CCNGG	4 cut(s)	736, 1646, 1669, 1882
TaaI	ACNGT	8 cut(s)	167, 658, 1069, 1237, 1414, 1471, 1545, 1892
TaiI	ACGT	4 cut(s)	723, 1117, 1287, 1360
TaqI	TCGA	5 cut(s)	8, 263, 347, 451, 1984
TatI	WGTACW	1 cut(s)	1333
TauI	GCSGC	7 cut(s)	71, 114, 117, 120, 370, 768, 2070
TfiI	GAWTC	4 cut(s)	505, 635, 1319, 1535
Tru1I	TTAA	5 cut(s)	516, 630, 1209, 1799, 2121
Tru9I	TTAA	5 cut(s)	516, 630, 1209, 1799, 2121
TseFI	GTSAC	2 cut(s)	1738, 1943
TseI	GCWGC	8 cut(s)	65, 768, 1601, 1604, 1769, 1772, 2133, 2136
Tsp45I	GTSAC	2 cut(s)	1738, 1943
TspDTI	ATGAA	8 cut(s)	552, 669, 822, 1140, 1320, 1517, 1794, 1824
TspGWI	ACGGA	1 cut(s)	1629
VpaK11BI	GGWCC	1 cut(s)	583
XapI	RAATTY	2 cut(s)	1229, 2271
XceI	RCATGY	2 cut(s)	892, 1505
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1288
XmiI	GTMKAC	1 cut(s)	1984
XmnI	GAANNNNTTC	2 cut(s)	855, 1815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.