Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000488.1

Orthogroup ID

OG0008008

Physical Location & Seq

Genomic Coordinates Forward (+)

7344 .. 9128

Gene Structure 1785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

atgcatcccagacttcaaattctccacaaaagcaaacagattgtgaggactctctgctctttaactcccacatcggaaaaattgaatcttccactggtttcagagctattagcaaagcagaggtggtcagagctcagaacccatctcaaagactcggactttacctcagtttttcatcaggttttggattctggagcagacccagtactgatactcaggtacttacattgttgccagaaggatttcaatgctgcacataatctggaactcacttttagactcttgggttcattagcaatagccaaaaggtactcaaagattagagcttttttacatgggttcgttagaagcaatgaaaagctatcaaattctgcaatttttaactcgctttcgttgggtagtaaacatttggctgcaaattccattattgttaacttgttggtgttggcatatgcgaaaaatttgaagacccatttgggtgttgaagcatttcagaaagctggtgattatgggttcaagttggtggtgttttcttgtaaccctttgttaagggctttggtgaaggaaggtgaaattgggaatgttgaatttgtttacagggagatgattaggaggagaattaggcccaatttgtacacgtttaatatggtgattaggggattgtgtaaagttgggaaattggaggaggcaaaggatgttattattaatgacatgaaggcttgggggatgtcaccaaatgtggttagttataatactttgatcgatgggtattgcaagttgggtgggttggggaagatgtacaaagctgatgcgattgtgaaggaaatgatggcaaatagtattcggccaaataagtgtacttacaatattttgattagtggctttggtaaagatgagaatgtaccggctgcggtcaaagtttttgaggcgataacaaagcaggatttgaaaccagatgagtttacatgttgttcactgattaatgggttgtgccgcattggtgagcttgacaaggcttgcgatttactgggggaaatgcgtggcttgggtttgaagccaaatgttattacgtacaatgcacttattaatgggttttgtaagaagaagatgatgaagagagctagagagttattcgatgacattggcagacaaggcttggagccgagtgttattacgtacaatacactaattgatgcttactccaaggatgggatgatggaggaagcatatgaggtgtataattcaatgttagagagaggagtttccccaaacacttcgaccttcaactgccggattgctggtttgtgcagacagggaaacatggagatggccatgaagcttttacatgaaatggaggttgatggcttgagagctgatcgcataacatataacacgttaatagatggattgtgcaaagaagggaagtcaagaaaggcaggaactctcttggatgagatgttcaagaagcgtttgagtccaaatcacttgacatacaattttttgatggatggatactgcagggaaggaaacctcagtgcagctttgaatctgagggcactgatggagaaaggagggaagcgaccaaatactgcaacatataatgcgttgatcaagggatattctaagaaggacaagcttgaagatgcgaatgggcttcttaatgaaatgttggagaaggggttggtcccaaaccaaactacttacgaaatagtgaaagaggaaatgatgaagaaaggttttgttcctgatatagattggcacctgtataatatctctagctcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

594

Amino Acids

66.93

Weight (kDa)

9.1

Isoelectric Point (pI)

29.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	164 - 218	6.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	176 - 223	9.9e-11	PPR repeat family
PPR_1	PF12854	207 - 233	1.3e-07	PPR repeat
PPR_2	PF13041	213 - 259	1.1e-14	PPR repeat family
PPR_3	PF13812	234 - 297	1.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	241 - 261	4.2e-08	PPR repeat
PPR_2	PF13041	264 - 297	6.1e-06	PPR repeat family
PPR_long	PF17177	274 - 399	7.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	281 - 309	2.4e-06	PPR repeat
PPR_2	PF13041	286 - 332	1.3e-11	PPR repeat family
PPR_3	PF13812	307 - 365	4.8e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	315 - 347	5.1e-09	PPR repeat
PPR	PF01535	321 - 351	3.7e-06	PPR repeat
PPR_2	PF13041	325 - 367	6.9e-14	PPR repeat family
PPR_1	PF12854	350 - 380	4.2e-12	PPR repeat
PPR_2	PF13041	353 - 399	2.8e-16	PPR repeat family
PPR	PF01535	356 - 385	5e-07	PPR repeat
PPR_long	PF17177	371 - 500	2.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	377 - 430	5.4e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	385 - 416	2e-10	PPR repeat
PPR_2	PF13041	388 - 430	1.1e-15	PPR repeat family
PPR	PF01535	391 - 421	1.5e-10	PPR repeat
PPR_1	PF12854	419 - 452	4.5e-09	PPR repeat
PPR_2	PF13041	423 - 472	2.2e-16	PPR repeat family
PPR	PF01535	426 - 456	1.7e-06	PPR repeat
PPR_3	PF13812	446 - 505	2.8e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	455 - 486	1.9e-10	PPR repeat
PPR_2	PF13041	459 - 507	9.5e-17	PPR repeat family
PPR	PF01535	461 - 490	2.4e-07	PPR repeat
PPR_1	PF12854	490 - 521	7.6e-08	PPR repeat
PPR_2	PF13041	496 - 542	4.8e-13	PPR repeat family
PPR_3	PF13812	521 - 569	9.2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	527 - 556	8.3e-07	PPR repeat
PPR_2	PF13041	528 - 570	1.2e-13	PPR repeat family
PPR	PF01535	532 - 561	5.1e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008008)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09820
fragaria_vesca	FvH4_1g12100 FvH4_6g07430
malus_domestica	MD02G1110600.v1.1
prunus_persica	Prupe.7G165800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0099761 RchiOBHm_Chr3g0457031
rosa_laevigata	RLG00000016911 RLG00000025250
rosa_multiflora	Rmu_co8452377.1_g000001 Rmu_sc0000488.1_g000002 Rmu_sc0006209.1_g000003 Rmu_sc0008864.1_g000012
rosa_roxburghii	Rroxscaffold_2G00142790 Rroxscaffold_6G00422250
rosa_rugosa	Rorug02G0082800 Rorug03G0018700
rosa_samantha	Rh2AG132500 Rh2BG135300 Rh2CG136600 Rh2DG137100 Rh3AG078400
rosa_wichuraiana	Rw2G010250 Rw3G006730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AccB1I	GGYRCC	1 cut(s)	1758
AciI	CCGC	2 cut(s)	911, 994
AcoI	YGGCCR	2 cut(s)	845, 1329
AcsI	RAATTY	5 cut(s)	18, 367, 418, 460, 587
AfaI	GTAC	9 cut(s)	207, 221, 311, 635, 800, 859, 903, 1073, 1178
AfiI	CCNNNNNNNGG	1 cut(s)	1209
AflIII	ACRYGT	3 cut(s)	636, 965, 1392
AjuI	GAANNNNNNNTTGG	4 cut(s)	458, 490, 558, 590
AloI	GAACNNNNNNTCC	2 cut(s)	1442, 1474
Alw21I	GWGCWC	1 cut(s)	135
AoxI	GGCC	3 cut(s)	623, 845, 1329
ApeKI	GCWGC	4 cut(s)	251, 413, 908, 1538
ApoI	RAATTY	5 cut(s)	18, 367, 418, 460, 587
AseI	ATTAAT	3 cut(s)	705, 981, 1086
Asp700I	GAANNNNTTC	2 cut(s)	242, 489
AspS9I	GGNCC	2 cut(s)	624, 1684
AsuHPI	GGTGA	6 cut(s)	515, 571, 581, 661, 723, 1013
AvaII	GGWCC	1 cut(s)	1684
BaeGI	GKGCMC	1 cut(s)	1558
BaeI	ACNNNNGTAYC	2 cut(s)	203, 236
BalI	TGGCCA	1 cut(s)	1331
BanI	GGYRCC	1 cut(s)	1758
BanII	GRGCYC	1 cut(s)	135
BbsI	GAAGAC	1 cut(s)	473
Bbv12I	GWGCWC	1 cut(s)	135
BbvI	GCAGC	4 cut(s)	238, 400, 895, 1550
BciVI	GTATCC	1 cut(s)	1505
BclI	TGATCA	1 cut(s)	1608
BfaI	CTAG	2 cut(s)	1122, 1776
BfmI	CTRYAG	1 cut(s)	1516
BfuI	GTATCC	1 cut(s)	1505
BisI	GCNGC	5 cut(s)	252, 414, 909, 994, 1539
BlsI	GCNGC	5 cut(s)	253, 415, 910, 995, 1540
BmcAI	AGTACT	1 cut(s)	207
Bme18I	GGWCC	1 cut(s)	1684
BmgT120I	GGNCC	2 cut(s)	624, 1684
BmiI	GGNNCC	3 cut(s)	1161, 1686, 1760
BmrI	ACTGGG	2 cut(s)	197, 1037
BmsI	GCATC	4 cut(s)	13, 799, 1183, 1633
BmuI	ACTGGG	2 cut(s)	197, 1037
BpiI	GAAGAC	1 cut(s)	473
BpmI	CTGGAG	1 cut(s)	213
BpuEI	CTTGAG	1 cut(s)	1387
Bsa29I	ATCGAT	1 cut(s)	762
BsaAI	YACGTR	2 cut(s)	1071, 1176
BsaJI	CCNNGG	1 cut(s)	1203
BsaXI	ACNNNNNCTCC	2 cut(s)	1664, 1694
Bsc4I	CCNNNNNNNGG	1 cut(s)	1209
Bse118I	RCCGGY	1 cut(s)	904
Bse1I	ACTGG	3 cut(s)	99, 203, 1032
Bse3DI	GCAATG	1 cut(s)	358
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	1 cut(s)	1203
BseGI	GGATG	7 cut(s)	4, 700, 732, 1213, 1218, 1456, 1513
BseLI	CCNNNNNNNGG	1 cut(s)	1209
BseMI	GCAATG	1 cut(s)	358
BseMII	CTCAG	5 cut(s)	148, 180, 229, 1541, 1546
BseNI	ACTGG	3 cut(s)	99, 203, 1032
BseRI	GAGGAG	3 cut(s)	628, 698, 1272
BseSI	GKGCMC	1 cut(s)	1558
BseXI	GCAGC	4 cut(s)	238, 400, 895, 1550
BsgI	GTGCAG	3 cut(s)	237, 1327, 1557
BshFI	GGCC	3 cut(s)	625, 847, 1331
BshNI	GGYRCC	1 cut(s)	1758
BshVI	ATCGAT	1 cut(s)	762
BsiHKAI	GWGCWC	1 cut(s)	135
BsiSI	CCGG	2 cut(s)	905, 1291
BslFI	GGGAC	1 cut(s)	1670
BslI	CCNNNNNNNGG	1 cut(s)	1209
BsmFI	GGGAC	1 cut(s)	1670
BsnI	GGCC	3 cut(s)	625, 847, 1331
Bsp1286I	GDGCHC	2 cut(s)	135, 1558
Bsp1407I	TGTACA	2 cut(s)	633, 798
Bsp143I	GATC	3 cut(s)	759, 1375, 1608
BspACI	CCGC	2 cut(s)	911, 994
BspANI	GGCC	3 cut(s)	625, 847, 1331
BspCNI	CTCAG	5 cut(s)	147, 179, 228, 1542, 1545
BspDI	ATCGAT	1 cut(s)	762
BspLI	GGNNCC	3 cut(s)	1161, 1686, 1760
BspMAI	CTGCAG	1 cut(s)	1520
BspT107I	GGYRCC	1 cut(s)	1758
BsrDI	GCAATG	1 cut(s)	358
BsrFI	RCCGGY	1 cut(s)	904
BsrGI	TGTACA	2 cut(s)	633, 798
BsrI	ACTGG	3 cut(s)	99, 203, 1032
BssAI	RCCGGY	1 cut(s)	904
BssECI	CCNNGG	1 cut(s)	1203
BssMI	GATC	3 cut(s)	759, 1375, 1608
BssT1I	CCWWGG	1 cut(s)	1203
Bst6I	CTCTTC	1 cut(s)	1109
BstAUI	TGTACA	2 cut(s)	633, 798
BstBAI	YACGTR	2 cut(s)	1071, 1176
BstC8I	GCNNGC	1 cut(s)	1018
BstDEI	CTNAG	7 cut(s)	134, 166, 215, 1532, 1550, 1623, 1782
BstF5I	GGATG	7 cut(s)	4, 700, 732, 1213, 1218, 1456, 1513
BstKTI	GATC	3 cut(s)	762, 1378, 1611
BstMBI	GATC	3 cut(s)	759, 1375, 1608
BstMWI	GCNNNNNNNGC	1 cut(s)	1152
BstNSI	RCATGY	1 cut(s)	969
BstSFI	CTRYAG	1 cut(s)	1516
BstSLI	GKGCMC	1 cut(s)	1558
BstSNI	TACGTA	2 cut(s)	1071, 1176
BstV1I	GCAGC	4 cut(s)	238, 400, 895, 1550
BstV2I	GAAGAC	1 cut(s)	473
Bsu15I	ATCGAT	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	1505
BsuRI	GGCC	3 cut(s)	625, 847, 1331
BsuTUI	ATCGAT	1 cut(s)	762
BtsCI	GGATG	7 cut(s)	4, 700, 732, 1213, 1218, 1456, 1513
BtsIMutI	CAGTG	4 cut(s)	92, 974, 1540, 1556
Cac8I	GCNNGC	1 cut(s)	1018
Cfr10I	RCCGGY	1 cut(s)	904
Cfr13I	GGNCC	2 cut(s)	624, 1684
ClaI	ATCGAT	1 cut(s)	762
Csp6I	GTAC	9 cut(s)	206, 220, 310, 634, 799, 858, 902, 1072, 1177
CspCI	CAANNNNNGTGG	2 cut(s)	763, 798
CviAII	CATG	6 cut(s)	335, 712, 966, 1321, 1333, 1346
CviQI	GTAC	9 cut(s)	206, 220, 310, 634, 799, 858, 902, 1072, 1177
DdeI	CTNAG	7 cut(s)	134, 166, 215, 1532, 1550, 1623, 1782
DpnI	GATC	3 cut(s)	761, 1377, 1610
DpnII	GATC	3 cut(s)	759, 1375, 1608
EaeI	YGGCCR	2 cut(s)	845, 1329
Eam1104I	CTCTTC	1 cut(s)	1109
EarI	CTCTTC	1 cut(s)	1109
Ecl136II	GAGCTC	1 cut(s)	133
Eco105I	TACGTA	2 cut(s)	1071, 1176
Eco130I	CCWWGG	1 cut(s)	1203
Eco24I	GRGCYC	1 cut(s)	135
Eco47I	GGWCC	1 cut(s)	1684
Eco53kI	GAGCTC	1 cut(s)	133
EcoICRI	GAGCTC	1 cut(s)	133
EcoT14I	CCWWGG	1 cut(s)	1203
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	135
ErhI	CCWWGG	1 cut(s)	1203
FaeI	CATG	6 cut(s)	338, 715, 969, 1324, 1336, 1349
FaqI	GGGAC	1 cut(s)	1670
FatI	CATG	6 cut(s)	334, 711, 965, 1320, 1332, 1345
FauNDI	CATATG	2 cut(s)	451, 1228
FbaI	TGATCA	1 cut(s)	1608
Fnu4HI	GCNGC	5 cut(s)	252, 414, 909, 994, 1539
FokI	GGATG	6 cut(s)	707, 739, 1220, 1225, 1463, 1520
FriOI	GRGCYC	1 cut(s)	135
Fsp4HI	GCNGC	5 cut(s)	252, 414, 909, 994, 1539
FspBI	CTAG	2 cut(s)	1122, 1776
GluI	GCNGC	5 cut(s)	252, 414, 909, 994, 1539
GsuI	CTGGAG	1 cut(s)	213
HaeIII	GGCC	3 cut(s)	625, 847, 1331
HapII	CCGG	2 cut(s)	905, 1291
Hin1II	CATG	6 cut(s)	338, 715, 969, 1324, 1336, 1349
HincII	GTYRAC	1 cut(s)	433
HindII	GTYRAC	1 cut(s)	433
HindIII	AAGCTT	2 cut(s)	1337, 1634
HinfI	GANTC	7 cut(s)	49, 85, 152, 188, 279, 1474, 1546
HpaI	GTTAAC	1 cut(s)	433
HpaII	CCGG	2 cut(s)	905, 1291
HphI	GGTGA	6 cut(s)	515, 571, 581, 661, 723, 1013
Hpy166II	GTNNAC	7 cut(s)	404, 433, 595, 636, 858, 963, 974
Hpy188I	TCNGA	7 cut(s)	76, 103, 130, 137, 157, 495, 1551
Hpy188III	TCNNGA	5 cut(s)	192, 263, 1428, 1462, 1745
Hpy8I	GTNNAC	7 cut(s)	404, 433, 595, 636, 858, 963, 974
HpyCH4IV	ACGT	4 cut(s)	638, 1070, 1175, 1394
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1152
HpyF3I	CTNAG	7 cut(s)	134, 166, 215, 1532, 1550, 1623, 1782
HpySE526I	ACGT	4 cut(s)	638, 1070, 1175, 1394
Hsp92II	CATG	6 cut(s)	338, 715, 969, 1324, 1336, 1349
Ksp22I	TGATCA	1 cut(s)	1608
KspAI	GTTAAC	1 cut(s)	433
Kzo9I	GATC	3 cut(s)	759, 1375, 1608
LmnI	GCTCC	2 cut(s)	194, 1159
Lsp1109I	GCAGC	4 cut(s)	238, 400, 895, 1550
LweI	GCATC	4 cut(s)	13, 799, 1183, 1633
MaeI	CTAG	2 cut(s)	1122, 1776
MaeII	ACGT	4 cut(s)	638, 1070, 1175, 1394
MaeIII	GTNAC	2 cut(s)	536, 729
MalI	GATC	3 cut(s)	761, 1377, 1610
MboI	GATC	3 cut(s)	759, 1375, 1608
MboII	GAAGA	8 cut(s)	80, 478, 805, 1114, 1117, 1126, 1652, 1741
MhlI	GDGCHC	2 cut(s)	135, 1558
MlsI	TGGCCA	1 cut(s)	1331
MluNI	TGGCCA	1 cut(s)	1331
MlyI	GAGTC	4 cut(s)	43, 146, 273, 1483
MmeI	TCCRAC	1 cut(s)	1650
Mox20I	TGGCCA	1 cut(s)	1331
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	242, 489
MscI	TGGCCA	1 cut(s)	1331
MslI	CAYNNNNRTG	2 cut(s)	477, 1325
Msp20I	TGGCCA	1 cut(s)	1331
MspI	CCGG	2 cut(s)	905, 1291
MwoI	GCNNNNNNNGC	1 cut(s)	1152
NdeI	CATATG	2 cut(s)	451, 1228
NdeII	GATC	3 cut(s)	759, 1375, 1608
NlaIII	CATG	6 cut(s)	338, 715, 969, 1324, 1336, 1349
NlaIV	GGNNCC	3 cut(s)	1161, 1686, 1760
NmeAIII	GCCGAG	1 cut(s)	1188
NmuCI	GTSAC	1 cut(s)	729
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	969
PciI	ACATGT	1 cut(s)	965
PdmI	GAANNNNTTC	2 cut(s)	242, 489
PfeI	GAWTC	3 cut(s)	85, 188, 1546
PkrI	GCNGC	5 cut(s)	253, 415, 910, 995, 1540
PleI	GAGTC	4 cut(s)	43, 146, 273, 1482
PpsI	GAGTC	4 cut(s)	43, 146, 273, 1482
Ppu21I	YACGTR	2 cut(s)	1071, 1176
PscI	ACATGT	1 cut(s)	965
PshBI	ATTAAT	3 cut(s)	705, 981, 1086
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	135
PspN4I	GGNNCC	3 cut(s)	1161, 1686, 1760
PspPI	GGNCC	2 cut(s)	624, 1684
PstI	CTGCAG	1 cut(s)	1520
RsaI	GTAC	9 cut(s)	207, 221, 311, 635, 800, 859, 903, 1073, 1178
RsaNI	GTAC	9 cut(s)	206, 220, 310, 634, 799, 858, 902, 1072, 1177
RseI	CAYNNNNRTG	2 cut(s)	477, 1325
SacI	GAGCTC	1 cut(s)	135
SatI	GCNGC	5 cut(s)	252, 414, 909, 994, 1539
Sau3AI	GATC	3 cut(s)	759, 1375, 1608
Sau96I	GGNCC	2 cut(s)	624, 1684
ScaI	AGTACT	1 cut(s)	207
SchI	GAGTC	4 cut(s)	43, 146, 273, 1483
SduI	GDGCHC	2 cut(s)	135, 1558
SfaNI	GCATC	4 cut(s)	13, 799, 1183, 1633
SfcI	CTRYAG	1 cut(s)	1516
SinI	GGWCC	1 cut(s)	1684
SmiMI	CAYNNNNRTG	2 cut(s)	477, 1325
SmlI	CTYRAG	1 cut(s)	1366
SmoI	CTYRAG	1 cut(s)	1366
SnaBI	TACGTA	2 cut(s)	1071, 1176
SsiI	CCGC	2 cut(s)	911, 994
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	2 cut(s)	1122, 1776
SstI	GAGCTC	1 cut(s)	135
StyI	CCWWGG	1 cut(s)	1203
TaiI	ACGT	4 cut(s)	641, 1073, 1178, 1397
TaqI	TCGA	3 cut(s)	762, 1134, 1277
TatI	WGTACW	4 cut(s)	205, 633, 798, 857
TauI	GCSGC	1 cut(s)	996
TfiI	GAWTC	3 cut(s)	85, 188, 1546
TscAI	CASTG	4 cut(s)	99, 981, 1540, 1563
TseFI	GTSAC	1 cut(s)	729
TseI	GCWGC	4 cut(s)	251, 413, 908, 1538
Tsp45I	GTSAC	1 cut(s)	729
TspDTI	ATGAA	9 cut(s)	164, 279, 369, 728, 1127, 1349, 1362, 1677, 1742
TspRI	CASTG	4 cut(s)	99, 981, 1540, 1563
VpaK11BI	GGWCC	1 cut(s)	1684
VspI	ATTAAT	3 cut(s)	705, 981, 1086
XapI	RAATTY	5 cut(s)	18, 367, 418, 460, 587
XceI	RCATGY	1 cut(s)	969
XmnI	GAANNNNTTC	2 cut(s)	242, 489
XspI	CTAG	2 cut(s)	1122, 1776
ZrmI	AGTACT	1 cut(s)	207
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.