Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
10355691 .. 10357520
Rw2G010250.1
Length: 1830 bp
ATGCTAAAGCTCCTCTCCTCCTCCTCATCATGCCTCCACGCTCGAGCCCACATTCAGCAGCACCCCCAAATCAACAGAATCAAACTCTGTTCCACAATCTCCATCTCCGAAAATCCAAGCTCACAGTCCTTCAATCTTCCATTAGTTTCAGACCTCATAGCAAAGCAACACTGGTCAGAGCTCAAAACCCATCTCAAAGACTCAACCTTTATCACAGTTCTTCACCAACTGATCGATTCTGGAGCTGACCCAGAGCTCACACTCAGGTACTTCAATTGGGCCCAGAAGGGTCAAAATGTTCCACACAATATTGAAATCACTTGTAGACTATTGCAGTCACTTTCAAATGCAAAGAAGTACCCAAAGATGAGAGCTTTCTTAGATGAATTTGTTAGAAGGAATGAGAAGCATTCAGTTTCTTCAATTTTTCATATGCTTTCAATGTATAGCAATCACTTTTGTGCTAATTCCATTATAGTTGATATGCTGGTGTTGGCTTATGTTAAGAATTCGAAGACCAATTCGGGTTTTGAGGCGTTTCAGAGAGCTGGTGATTATGGGTTTAGGCTGTCAAAACTGTCTTGTAATGCTTTGTTGAGTGCTTTGGTGAAGGAAAATGAAATTGGGTATGTTGAGTTTGTGTACAAGGAGATGTTTAGGAGGAGGATAGAGGCGGATTTGTATAGTTTCAATATTGTGATTAATGGGTTGTGTAAAGTTGGGAAATTGAACAAGGCAAAGGATGTTATGGATGATATGAAGGCTTGGGGGGTTGCACCAAATGTGGTTACTTATAATACTGTCATTGGTGGGTATTGCAAATTGGGTGGGTTGGGGAAAATGCATAAGGCTGATGCCATATTGAAGGAGATGGTGGCGAACAATATTTGTCCGAGTGTGATCACGTTCAATATTTTGATTAATGGGTTCTGTAAAGATGAGAATGTAGCAGCTGCGTTAAAGGTGTTTGAGGAAATGAGGAGGCAGGGCTTGAAACCTAATTTGGTTACTTATAATTCACTGATTAATGGGTTATGCTGTGATGGGAAGCTTGAGGAGGCTTGTGGATTGCGGGACGAAATGCTTGGATTGGGTTTGAAGCCAGAGATAGCAACCTACAATGCACTTATAAATGGGTTTTGCAAGAAGAAAATGCTGAAGGAAGCTAGAGAGCTGTTTGATAGCATTTGTGAGCGAGGCTTGGTAACCAATGTTATAACATTTAATTCACTAATTGATGCTTATTGTAAGAATGAGATGAAGGAGGAAGCATATGAATTGCATAGCATGATGATAGAGAGAGGGGTTTTACCAAACACGTCAACATTTAACTGCTTGATTCATGGTTCTCTTAGACAGGGAAACATAGAAACAGCCAGGAAATTCTTACAACAAATGGAGGCTGAGGGCTTGAAAGCTGATTGCATAACATATGATATACTGATAAATGCATTATGTAAAGATGGGGAGCCAAGAAAGGCAGAAAGACTCCTGAATGAGATGTTCACTAAGGGTCTGAGCCCAAGGCACGTGACATACAATACTTTGATGGATGGCTACTGCAGGGAAGGAAACCTGAAGGCAGCTTTGAACTTGAGGACTCGGATGGAGAAAGAAGGGAAACGAGCAAATATAGCAACATACAATTTGCTGATCAAGGGATATTGTATGCAGGACAAGCTTGTAGATGCGAATGTACTTCTAAATGAAATGTTGGAGAAAGGTTTGATCCCAAATCGAACTACTTATGAAATAGTTAAAGTGGAAATGATGGACAAAGGTTTTGTTCCTGATATAGATGGACACCTGCATAATATCTCTAGCTCTTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
8.58
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| PPR_2 |
PF13041 |
194 - 239 |
7e-09 |
PPR repeat family |
| PPR_3 |
PF13812 |
215 - 272 |
2.1e-10 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
223 - 254 |
5.4e-09 |
PPR repeat |
| PPR_2 |
PF13041 |
226 - 274 |
4.3e-18 |
PPR repeat family |
| PPR |
PF01535 |
228 - 258 |
1.4e-06 |
PPR repeat |
| PPR_1 |
PF12854 |
257 - 291 |
2.8e-07 |
PPR repeat |
| PPR_2 |
PF13041 |
279 - 312 |
1.3e-08 |
PPR repeat family |
| PPR_long |
PF17177 |
284 - 378 |
3.4e-07 |
Pentacotripeptide-repeat region of PRORP |
| PPR_3 |
PF13812 |
287 - 343 |
5.7e-15 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
295 - 327 |
6.8e-13 |
PPR repeat |
| PPR_2 |
PF13041 |
298 - 346 |
3.7e-20 |
PPR repeat family |
| TPR_24 |
PF23276 |
301 - 395 |
1.8e-06 |
Fungal tetratrico peptide repeats |
| PPR |
PF01535 |
301 - 331 |
1.2e-07 |
PPR repeat |
| PPR_1 |
PF12854 |
330 - 361 |
4.1e-14 |
PPR repeat |
| PPR_2 |
PF13041 |
336 - 382 |
2.5e-14 |
PPR repeat family |
| PPR |
PF01535 |
336 - 366 |
2.3e-08 |
PPR repeat |
| PPR_3 |
PF13812 |
359 - 418 |
4.2e-09 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
365 - 394 |
5.1e-10 |
PPR repeat |
| PPR_2 |
PF13041 |
368 - 409 |
2.1e-10 |
PPR repeat family |
| PPR |
PF01535 |
372 - 401 |
4.7e-08 |
PPR repeat |
| TPR_24 |
PF23276 |
391 - 494 |
2.1e-07 |
Fungal tetratrico peptide repeats |
| PPR_1 |
PF12854 |
399 - 431 |
6.7e-08 |
PPR repeat |
| PPR_2 |
PF13041 |
404 - 449 |
5.5e-14 |
PPR repeat family |
| PPR |
PF01535 |
406 - 436 |
1.7e-08 |
PPR repeat |
| PPR_3 |
PF13812 |
431 - 485 |
1.8e-06 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
434 - 467 |
1.4e-06 |
PPR repeat |
| PPR_2 |
PF13041 |
438 - 487 |
5.8e-14 |
PPR repeat family |
| PPR_long |
PF17177 |
456 - 541 |
7.3e-07 |
Pentacotripeptide-repeat region of PRORP |
| PPR_1 |
PF12854 |
470 - 501 |
1.5e-10 |
PPR repeat |
| PPR |
PF01535 |
476 - 506 |
6.7e-07 |
PPR repeat |
| PPR_2 |
PF13041 |
476 - 508 |
3.9e-07 |
PPR repeat family |
| PPR_3 |
PF13812 |
496 - 555 |
4.7e-10 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
504 - 537 |
1.6e-10 |
PPR repeat |
| PPR_2 |
PF13041 |
510 - 556 |
8.5e-15 |
PPR repeat family |
| PPR |
PF01535 |
511 - 540 |
1.7e-07 |
PPR repeat |
| PPR_3 |
PF13812 |
536 - 584 |
6.2e-06 |
Pentatricopeptide repeat domain |
| PPR_1 |
PF12854 |
543 - 571 |
7.4e-06 |
PPR repeat |
| PPR_2 |
PF13041 |
544 - 585 |
3.7e-11 |
PPR repeat family |
| PPR |
PF01535 |
547 - 576 |
7.9e-06 |
PPR repeat |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0008008)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AanI |
TTATAA |
4 cut(s)
|
795, 1014, 1130, 1217 |
| AarI |
CACCTGC |
1 cut(s)
|
1815 |
| Acc36I |
ACCTGC |
1 cut(s)
|
1815 |
| AccI |
GTMKAC |
1 cut(s)
|
325 |
| AciI |
CCGC |
2 cut(s)
|
674, 1072 |
| AclWI |
GGATC |
1 cut(s)
|
1723 |
| AcsI |
RAATTY |
3 cut(s)
|
386, 508, 1382 |
| AcuI |
CTGAAG |
2 cut(s)
|
1178, 1598 |
| AcvI |
CACGTG |
1 cut(s)
|
1531 |
| AfaI |
GTAC |
4 cut(s)
|
269, 359, 644, 1698 |
| AflIII |
ACRYGT |
1 cut(s)
|
1317 |
| AjiI |
CACGTC |
1 cut(s)
|
1320 |
| AjnI |
CCWGG |
1 cut(s)
|
1376 |
| AjuI |
GAANNNNNNNTTGG |
4 cut(s)
|
606, 638, 986, 1018 |
| AleI |
CACNNNNGTG |
1 cut(s)
|
459 |
| Alw21I |
GWGCWC |
2 cut(s)
|
183, 258 |
| AlwI |
GGATC |
1 cut(s)
|
1723 |
| Ama87I |
CYCGRG |
1 cut(s)
|
42 |
| AoxI |
GGCC |
1 cut(s)
|
279 |
| ApaI |
GGGCCC |
1 cut(s)
|
283 |
| ApeKI |
GCWGC |
4 cut(s)
|
58, 950, 953, 1583 |
| ApoI |
RAATTY |
3 cut(s)
|
386, 508, 1382 |
| ArsI |
GACNNNNNNTTYG |
2 cut(s)
|
1766, 1798 |
| AseI |
ATTAAT |
3 cut(s)
|
702, 921, 1026 |
| AspS9I |
GGNCC |
2 cut(s)
|
279, 280 |
| AsuHPI |
GGTGA |
3 cut(s)
|
215, 563, 619 |
| AsuII |
TTCGAA |
1 cut(s)
|
512 |
| AvaI |
CYCGRG |
1 cut(s)
|
42 |
| BaeGI |
GKGCMC |
1 cut(s)
|
283 |
| BanII |
GRGCYC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| BbrPI |
CACGTG |
1 cut(s)
|
1531 |
| BbsI |
GAAGAC |
1 cut(s)
|
521 |
| Bbv12I |
GWGCWC |
2 cut(s)
|
183, 258 |
| BbvCI |
CCTCAGC |
1 cut(s)
|
1404 |
| BbvI |
GCAGC |
4 cut(s)
|
70, 940, 962, 1595 |
| BciT130I |
CCWGG |
1 cut(s)
|
1378 |
| BclI |
TGATCA |
2 cut(s)
|
900, 1653 |
| BfaI |
CTAG |
2 cut(s)
|
1167, 1821 |
| BfmI |
CTRYAG |
1 cut(s)
|
1561 |
| BfuAI |
ACCTGC |
1 cut(s)
|
1815 |
| BisI |
GCNGC |
4 cut(s)
|
59, 951, 954, 1584 |
| BlsI |
GCNGC |
4 cut(s)
|
60, 952, 955, 1585 |
| Bme1390I |
CCNGG |
1 cut(s)
|
1378 |
| BmeT110I |
CYCGRG |
1 cut(s)
|
42 |
| BmgBI |
CACGTC |
1 cut(s)
|
1320 |
| BmgT120I |
GGNCC |
2 cut(s)
|
279, 280 |
| BmiI |
GGNNCC |
2 cut(s)
|
281, 1470 |
| BmrFI |
CCNGG |
1 cut(s)
|
1378 |
| BmsI |
GCATC |
3 cut(s)
|
844, 1228, 1678 |
| BpiI |
GAAGAC |
1 cut(s)
|
521 |
| BpmI |
CTGGAG |
1 cut(s)
|
261 |
| Bpu10I |
CCTNAGC |
1 cut(s)
|
1404 |
| Bpu14I |
TTCGAA |
1 cut(s)
|
512 |
| BpuEI |
CTTGAG |
2 cut(s)
|
1073, 1615 |
| Bsa29I |
ATCGAT |
1 cut(s)
|
234 |
| BsaAI |
YACGTR |
1 cut(s)
|
1531 |
| BsaJI |
CCNNGG |
1 cut(s)
|
1523 |
| Bse1I |
ACTGG |
1 cut(s)
|
176 |
| BseBI |
CCWGG |
1 cut(s)
|
1378 |
| BseCI |
ATCGAT |
1 cut(s)
|
234 |
| BseDI |
CCNNGG |
1 cut(s)
|
1523 |
| BseGI |
GGATG |
4 cut(s)
|
748, 757, 1558, 1611 |
| BseMII |
CTCAG |
3 cut(s)
|
277, 1395, 1508 |
| BseNI |
ACTGG |
1 cut(s)
|
176 |
| BseRI |
GAGGAG |
6 cut(s)
|
7, 10, 13, 676, 994, 1070 |
| BseSI |
GKGCMC |
1 cut(s)
|
283 |
| BseXI |
GCAGC |
4 cut(s)
|
70, 940, 962, 1595 |
| BshFI |
GGCC |
1 cut(s)
|
281 |
| BshVI |
ATCGAT |
1 cut(s)
|
234 |
| BsiHKAI |
GWGCWC |
2 cut(s)
|
183, 258 |
| BsiHKCI |
CYCGRG |
1 cut(s)
|
42 |
| BslFI |
GGGAC |
1 cut(s)
|
1088 |
| BsmFI |
GGGAC |
1 cut(s)
|
1088 |
| BsmI |
GAATGC |
1 cut(s)
|
409 |
| BsnI |
GGCC |
1 cut(s)
|
281 |
| BsoBI |
CYCGRG |
1 cut(s)
|
42 |
| Bsp119I |
TTCGAA |
1 cut(s)
|
512 |
| Bsp120I |
GGGCCC |
1 cut(s)
|
279 |
| Bsp1286I |
GDGCHC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| Bsp1407I |
TGTACA |
1 cut(s)
|
642 |
| Bsp143I |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| BspACI |
CCGC |
2 cut(s)
|
674, 1072 |
| BspANI |
GGCC |
1 cut(s)
|
281 |
| BspCNI |
CTCAG |
3 cut(s)
|
276, 1396, 1509 |
| BspDI |
ATCGAT |
1 cut(s)
|
234 |
| BspLI |
GGNNCC |
2 cut(s)
|
281, 1470 |
| BspMAI |
CTGCAG |
1 cut(s)
|
1565 |
| BspMI |
ACCTGC |
1 cut(s)
|
1815 |
| BspPI |
GGATC |
1 cut(s)
|
1723 |
| BspT104I |
TTCGAA |
1 cut(s)
|
512 |
| BsrGI |
TGTACA |
1 cut(s)
|
642 |
| BsrI |
ACTGG |
1 cut(s)
|
176 |
| BssECI |
CCNNGG |
1 cut(s)
|
1523 |
| BssMI |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| BssT1I |
CCWWGG |
1 cut(s)
|
1523 |
| Bst2UI |
CCWGG |
1 cut(s)
|
1378 |
| Bst4CI |
ACNGT |
4 cut(s)
|
126, 217, 579, 802 |
| BstAUI |
TGTACA |
1 cut(s)
|
642 |
| BstBAI |
YACGTR |
1 cut(s)
|
1531 |
| BstBI |
TTCGAA |
1 cut(s)
|
512 |
| BstDEI |
CTNAG |
6 cut(s)
|
263, 379, 1352, 1404, 1509, 1517 |
| BstEII |
GGTNACC |
1 cut(s)
|
1204 |
| BstF5I |
GGATG |
4 cut(s)
|
748, 757, 1558, 1611 |
| BstKTI |
GATC |
4 cut(s)
|
234, 903, 1656, 1731 |
| BstMBI |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| BstMWI |
GCNNNNNNNGC |
2 cut(s)
|
1634, 1678 |
| BstNI |
CCWGG |
1 cut(s)
|
1378 |
| BstPI |
GGTNACC |
1 cut(s)
|
1204 |
| BstSCI |
CCNGG |
1 cut(s)
|
1376 |
| BstSFI |
CTRYAG |
1 cut(s)
|
1561 |
| BstSLI |
GKGCMC |
1 cut(s)
|
283 |
| BstV1I |
GCAGC |
4 cut(s)
|
70, 940, 962, 1595 |
| BstV2I |
GAAGAC |
1 cut(s)
|
521 |
| Bsu15I |
ATCGAT |
1 cut(s)
|
234 |
| BsuRI |
GGCC |
1 cut(s)
|
281 |
| BsuTUI |
ATCGAT |
1 cut(s)
|
234 |
| BtrI |
CACGTC |
1 cut(s)
|
1320 |
| BtsCI |
GGATG |
4 cut(s)
|
748, 757, 1558, 1611 |
| BtsIMutI |
CAGTG |
2 cut(s)
|
169, 1019 |
| BveI |
ACCTGC |
1 cut(s)
|
1815 |
| Cfr13I |
GGNCC |
2 cut(s)
|
279, 280 |
| ClaI |
ATCGAT |
1 cut(s)
|
234 |
| Csp6I |
GTAC |
4 cut(s)
|
268, 358, 643, 1697 |
| CspCI |
CAANNNNNGTGG |
2 cut(s)
|
808, 843 |
| CviAII |
CATG |
3 cut(s)
|
30, 1288, 1343 |
| CviQI |
GTAC |
4 cut(s)
|
268, 358, 643, 1697 |
| DdeI |
CTNAG |
6 cut(s)
|
263, 379, 1352, 1404, 1509, 1517 |
| DpnI |
GATC |
4 cut(s)
|
233, 902, 1655, 1730 |
| DpnII |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| EciI |
GGCGGA |
1 cut(s)
|
689 |
| Ecl136II |
GAGCTC |
2 cut(s)
|
181, 256 |
| Eco130I |
CCWWGG |
1 cut(s)
|
1523 |
| Eco24I |
GRGCYC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| Eco53kI |
GAGCTC |
2 cut(s)
|
181, 256 |
| Eco57I |
CTGAAG |
2 cut(s)
|
1178, 1598 |
| Eco72I |
CACGTG |
1 cut(s)
|
1531 |
| Eco88I |
CYCGRG |
1 cut(s)
|
42 |
| Eco91I |
GGTNACC |
1 cut(s)
|
1204 |
| EcoICRI |
GAGCTC |
2 cut(s)
|
181, 256 |
| EcoO65I |
GGTNACC |
1 cut(s)
|
1204 |
| EcoRI |
GAATTC |
1 cut(s)
|
508 |
| EcoRII |
CCWGG |
1 cut(s)
|
1376 |
| EcoT14I |
CCWWGG |
1 cut(s)
|
1523 |
| EcoT22I |
ATGCAT |
2 cut(s)
|
846, 1453 |
| EcoT38I |
GRGCYC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| ErhI |
CCWWGG |
1 cut(s)
|
1523 |
| FaeI |
CATG |
3 cut(s)
|
33, 1291, 1346 |
| FaqI |
GGGAC |
1 cut(s)
|
1088 |
| FatI |
CATG |
3 cut(s)
|
29, 1287, 1342 |
| FauI |
CCCGC |
1 cut(s)
|
1065 |
| FauNDI |
CATATG |
3 cut(s)
|
432, 1273, 1432 |
| FbaI |
TGATCA |
2 cut(s)
|
900, 1653 |
| FblI |
GTMKAC |
1 cut(s)
|
325 |
| Fnu4HI |
GCNGC |
4 cut(s)
|
59, 951, 954, 1584 |
| FokI |
GGATG |
4 cut(s)
|
755, 764, 1565, 1618 |
| FriOI |
GRGCYC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| Fsp4HI |
GCNGC |
4 cut(s)
|
59, 951, 954, 1584 |
| FspBI |
CTAG |
2 cut(s)
|
1167, 1821 |
| GluI |
GCNGC |
4 cut(s)
|
59, 951, 954, 1584 |
| GsuI |
CTGGAG |
1 cut(s)
|
261 |
| HaeIII |
GGCC |
1 cut(s)
|
281 |
| Hin1II |
CATG |
3 cut(s)
|
33, 1291, 1346 |
| HincII |
GTYRAC |
1 cut(s)
|
1323 |
| HindII |
GTYRAC |
1 cut(s)
|
1323 |
| HindIII |
AAGCTT |
2 cut(s)
|
1049, 1679 |
| HinfI |
GANTC |
6 cut(s)
|
78, 200, 236, 1339, 1488, 1600 |
| HphI |
GGTGA |
3 cut(s)
|
215, 563, 619 |
| Hpy166II |
GTNNAC |
4 cut(s)
|
326, 643, 1323, 1506 |
| Hpy188I |
TCNGA |
7 cut(s)
|
109, 151, 178, 543, 894, 1518, 1605 |
| Hpy188III |
TCNNGA |
3 cut(s)
|
240, 1492, 1790 |
| Hpy8I |
GTNNAC |
4 cut(s)
|
326, 643, 1323, 1506 |
| HpyCH4III |
ACNGT |
4 cut(s)
|
126, 217, 579, 802 |
| HpyCH4IV |
ACGT |
3 cut(s)
|
905, 1319, 1530 |
| HpyF10VI |
GCNNNNNNNGC |
2 cut(s)
|
1634, 1678 |
| HpyF3I |
CTNAG |
6 cut(s)
|
263, 379, 1352, 1404, 1509, 1517 |
| HpySE526I |
ACGT |
3 cut(s)
|
905, 1319, 1530 |
| Hsp92II |
CATG |
3 cut(s)
|
33, 1291, 1346 |
| Ksp22I |
TGATCA |
2 cut(s)
|
900, 1653 |
| Kzo9I |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| LmnI |
GCTCC |
3 cut(s)
|
15, 242, 1468 |
| Lsp1109I |
GCAGC |
4 cut(s)
|
70, 940, 962, 1595 |
| LweI |
GCATC |
3 cut(s)
|
844, 1228, 1678 |
| MaeI |
CTAG |
2 cut(s)
|
1167, 1821 |
| MaeII |
ACGT |
3 cut(s)
|
905, 1319, 1530 |
| MaeIII |
GTNAC |
5 cut(s)
|
336, 787, 1006, 1204, 1531 |
| MalI |
GATC |
4 cut(s)
|
233, 902, 1655, 1730 |
| MboI |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| MboII |
GAAGA |
5 cut(s)
|
128, 212, 411, 526, 1159 |
| MfeI |
CAATTG |
1 cut(s)
|
274 |
| MhlI |
GDGCHC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| MlyI |
GAGTC |
3 cut(s)
|
194, 1482, 1594 |
| MmeI |
TCCRAC |
1 cut(s)
|
1695 |
| Mph1103I |
ATGCAT |
2 cut(s)
|
846, 1453 |
| MseI |
TTAA |
9 cut(s)
|
504, 702, 921, 959, 1026, 1224, 1329, 1758, 1828 |
| MslI |
CAYNNNNRTG |
1 cut(s)
|
459 |
| MspA1I |
CMGCKG |
1 cut(s)
|
953 |
| MspR9I |
CCNGG |
1 cut(s)
|
1378 |
| MunI |
CAATTG |
1 cut(s)
|
274 |
| Mva1269I |
GAATGC |
1 cut(s)
|
409 |
| MvaI |
CCWGG |
1 cut(s)
|
1378 |
| MwoI |
GCNNNNNNNGC |
2 cut(s)
|
1634, 1678 |
| NdeI |
CATATG |
3 cut(s)
|
432, 1273, 1432 |
| NdeII |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| NlaIII |
CATG |
3 cut(s)
|
33, 1291, 1346 |
| NlaIV |
GGNNCC |
2 cut(s)
|
281, 1470 |
| NmuCI |
GTSAC |
2 cut(s)
|
336, 1531 |
| NsiI |
ATGCAT |
2 cut(s)
|
846, 1453 |
| NspV |
TTCGAA |
1 cut(s)
|
512 |
| OliI |
CACNNNNGTG |
1 cut(s)
|
459 |
| PaeR7I |
CTCGAG |
1 cut(s)
|
42 |
| PaqCI |
CACCTGC |
1 cut(s)
|
1815 |
| PctI |
GAATGC |
1 cut(s)
|
409 |
| PfeI |
GAWTC |
3 cut(s)
|
78, 236, 1339 |
| PkrI |
GCNGC |
4 cut(s)
|
60, 952, 955, 1585 |
| PleI |
GAGTC |
3 cut(s)
|
194, 1482, 1594 |
| PmaCI |
CACGTG |
1 cut(s)
|
1531 |
| PmlI |
CACGTG |
1 cut(s)
|
1531 |
| PpsI |
GAGTC |
3 cut(s)
|
194, 1482, 1594 |
| Ppu21I |
YACGTR |
1 cut(s)
|
1531 |
| PshBI |
ATTAAT |
3 cut(s)
|
702, 921, 1026 |
| PsiI |
TTATAA |
4 cut(s)
|
795, 1014, 1130, 1217 |
| Psp124BI |
GAGCTC |
2 cut(s)
|
183, 258 |
| Psp6I |
CCWGG |
1 cut(s)
|
1376 |
| PspCI |
CACGTG |
1 cut(s)
|
1531 |
| PspEI |
GGTNACC |
1 cut(s)
|
1204 |
| PspGI |
CCWGG |
1 cut(s)
|
1376 |
| PspN4I |
GGNNCC |
2 cut(s)
|
281, 1470 |
| PspOMI |
GGGCCC |
1 cut(s)
|
279 |
| PspPI |
GGNCC |
2 cut(s)
|
279, 280 |
| PspXI |
VCTCGAGB |
1 cut(s)
|
42 |
| PstI |
CTGCAG |
1 cut(s)
|
1565 |
| PvuII |
CAGCTG |
1 cut(s)
|
953 |
| RsaI |
GTAC |
4 cut(s)
|
269, 359, 644, 1698 |
| RsaNI |
GTAC |
4 cut(s)
|
268, 358, 643, 1697 |
| RseI |
CAYNNNNRTG |
1 cut(s)
|
459 |
| SacI |
GAGCTC |
2 cut(s)
|
183, 258 |
| SaqAI |
TTAA |
9 cut(s)
|
504, 702, 921, 959, 1026, 1224, 1329, 1758, 1828 |
| SatI |
GCNGC |
4 cut(s)
|
59, 951, 954, 1584 |
| Sau3AI |
GATC |
4 cut(s)
|
231, 900, 1653, 1728 |
| Sau96I |
GGNCC |
2 cut(s)
|
279, 280 |
| SchI |
GAGTC |
3 cut(s)
|
194, 1482, 1594 |
| ScrFI |
CCNGG |
1 cut(s)
|
1378 |
| SduI |
GDGCHC |
5 cut(s)
|
49, 183, 258, 283, 1523 |
| SfaNI |
GCATC |
3 cut(s)
|
844, 1228, 1678 |
| SfcI |
CTRYAG |
1 cut(s)
|
1561 |
| Sfr274I |
CTCGAG |
1 cut(s)
|
42 |
| SfuI |
TTCGAA |
1 cut(s)
|
512 |
| SlaI |
CTCGAG |
1 cut(s)
|
42 |
| SmiMI |
CAYNNNNRTG |
1 cut(s)
|
459 |
| SmlI |
CTYRAG |
3 cut(s)
|
42, 1052, 1594 |
| SmoI |
CTYRAG |
3 cut(s)
|
42, 1052, 1594 |
| SsiI |
CCGC |
2 cut(s)
|
674, 1072 |
| SspI |
AATATT |
4 cut(s)
|
310, 694, 886, 913 |
| SspMI |
CTAG |
2 cut(s)
|
1167, 1821 |
| SstI |
GAGCTC |
2 cut(s)
|
183, 258 |
| StyD4I |
CCNGG |
1 cut(s)
|
1376 |
| StyI |
CCWWGG |
1 cut(s)
|
1523 |
| TaaI |
ACNGT |
4 cut(s)
|
126, 217, 579, 802 |
| TaiI |
ACGT |
3 cut(s)
|
908, 1322, 1533 |
| TaqI |
TCGA |
4 cut(s)
|
43, 234, 512, 1738 |
| TatI |
WGTACW |
2 cut(s)
|
642, 1696 |
| TfiI |
GAWTC |
3 cut(s)
|
78, 236, 1339 |
| Tru1I |
TTAA |
9 cut(s)
|
504, 702, 921, 959, 1026, 1224, 1329, 1758, 1828 |
| Tru9I |
TTAA |
9 cut(s)
|
504, 702, 921, 959, 1026, 1224, 1329, 1758, 1828 |
| TscAI |
CASTG |
2 cut(s)
|
176, 1026 |
| TseFI |
GTSAC |
2 cut(s)
|
336, 1531 |
| TseI |
GCWGC |
4 cut(s)
|
58, 950, 953, 1583 |
| Tsp45I |
GTSAC |
2 cut(s)
|
336, 1531 |
| TspDTI |
ATGAA |
9 cut(s)
|
399, 419, 633, 773, 1274, 1290, 1331, 1722, 1764 |
| TspRI |
CASTG |
2 cut(s)
|
176, 1026 |
| VspI |
ATTAAT |
3 cut(s)
|
702, 921, 1026 |
| XapI |
RAATTY |
3 cut(s)
|
386, 508, 1382 |
| XhoI |
CTCGAG |
1 cut(s)
|
42 |
| XmiI |
GTMKAC |
1 cut(s)
|
325 |
| XspI |
CTAG |
2 cut(s)
|
1167, 1821 |
| Zsp2I |
ATGCAT |
2 cut(s)
|
846, 1453 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.