Rmu_sc0000560.1_g000008

Vacuolar protein sorting-associated protein 62

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000560.1
OG0007670
Physical Location & Seq
Reverse (-)
37247 .. 45102
7856 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2343 bp
atgttcttgtgcaagtgcttctattggaatcaactcaaagatttatttccaccagagcccgaacccttctccctgcctgctccaattcctcaatggcctccaggtgaaggttttgcttctggaaaaataagtattggagaaatagaggtttccaagatcaccagatttgaacgaatctgggcctgctctctgccagaggacaagaaaaaaacagttgcattttataagccagcaggaattcctgatggattccatagcatgggtcattattgccaactcaatggtaagcctttacacggctatgttcttgtggttcgagaagtagatttgccagaaacagctggtgttcaggagcatgtgaagtcagcagctcttcgagagccacttgattacacactggtgtggagccctgatgatgggaatgaggaaagttatggttcatgtggctacttttggttacctgatccacctgaaggttacagagcaatgggctttttagttaccaacaagccaggaaaacctgagttggatgaagtaaggtgtgttagagctgatttgactgacacatgcgaaactcacagcctactttttaataccagcatcaaatctgcaagtcttccttttcaagtttggactatgagaccacgtcatcggggaatgatgggaacaggggtctctgtaggtacatttttctgcagtagtcactggagtaatggacaagaactgcagattgggtgcttgaagaatctgaatcctatgctctctggaatgccaaatcttgatcaaattcattcacttatcaatcattatggacccactgttttctttcacccagaagaggtctacttgccatcttctgttgcctggttcttcaaaaatggagcgctattgtacaaaagtggcacagatgtaggcgaagcaattgatgaaagtggctcaaatttgcctggtggggggacaaatgataagcagttttggatagacttgcctagtggtgatcgaagaaagaatgtgatatatggaaacttggaaagtgcaaaactctacgttcatgtgaaaccagctcttggtgggacttttactgacattgcaatgtgggtattttgtccctttaatggaccagccactctcaaagtcggacctatggatatcgctctcagcaagattggacagcatgtgagtgactgggagcatttcacactccgaatatgcaactttactggagagctttgtagtatatactcctcacagcacagcggtggtcaatgggtagatgcatacgctttggagtacataagcgggaacaaagccattatctactcgacgaaaaatggacatgcaagctttccacatgctgggacttaccttcaggggtctgcaaagcttgggattggaattaggaatgatgctgctcgcagtgagttttctgtggattcaagccgccaatatgaagtagttgcggctgagtatcttggagatggagttgttactgagccaggttggctgcagtttatgagagaatggggtccaaaaattgtatacaattcaaggactgagatggataggatcatcaatgttttgcctgtgatgttgagatatcctgtggagaacatcttttcaaaaattccggttgagctttctggggaggaaggtcctacaggaccaaaggagaagaacaattgggtgggagatgaaagatgtgtggctgcttctgcgaaaactgtggatgaagggaagaccaaatggtttggtcgcaaggctgtgaattatcttttgattactgttactggcagcgtcgctttgagtgctcttgatgatcttattatttatcagagctgtagcagcaaggccatggagaaagccagtaaggacccagccattcgagatgctctaggggaacctcttttgaagggcccatggtacaatgcacagcttggagtagctcataagaggcaacctgtatcttgcaaatttcctgtgtatggatcaaaaggcacaggagttctcagcgtgaaggctgtacgtgatggagctcggggtgtgacggagcggcggagcttgccggacggacgtcacgggtcagacggacgggtctgcagtcggtggagtagccggcgacgtggttgcagccttgcccagaaacctgcagttgcaggtgagctcgctgcccagaaacctgcaactccgacctcctccgacctcgaacgctgcccagaaccgtccgccaagcctccgacctccatccgccaagccccgagcagctgtcgcagcctgaaacgccgccgctgcgtcgccgtccgcactttagcgtccgcttcaggaggagtgtataatcatgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Vps62

Protein Analysis

780

Amino Acids

85.78

Weight (kDa)

8.34

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Vps62 PF06101 20 - 565 1.4e-263 Vacuolar protein sorting-associated protein 62
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 225
AarI CACCTGC 1 cut(s) 2144
AasI GACNNNNNNGTC 1 cut(s) 2090
AatII GACGTC 1 cut(s) 2074
Acc36I ACCTGC 3 cut(s) 2144, 2152, 2185
AccB7I CCANNNNNTGG 3 cut(s) 259, 1067, 1355
AccBSI CCGCTC 1 cut(s) 2050
AccI GTMKAC 2 cut(s) 843, 1539
AclWI GGATC 3 cut(s) 458, 1574, 1993
AcsI RAATTY 5 cut(s) 237, 786, 940, 1623, 1970
AcuI CTGAAG 3 cut(s) 492, 1352, 2301
AcyI GRCGYC 1 cut(s) 2071
AfaI GTAC 5 cut(s) 685, 893, 1292, 1922, 2022
AfeI AGCGCT 1 cut(s) 885
AgsI TTSAA 8 cut(s) 170, 626, 742, 874, 1437, 1548, 1620, 1909
AjiI CACGTC 2 cut(s) 647, 2120
AjnI CCWGG 5 cut(s) 100, 511, 863, 946, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
AleI CACNNNNGTG 3 cut(s) 398, 400, 1257
Alw21I GWGCWC 3 cut(s) 1810, 2035, 2163
Alw26I GTCTC 2 cut(s) 634, 679
AlwI GGATC 3 cut(s) 458, 1574, 1993
Ama87I CYCGRG 2 cut(s) 2034, 2254
Aor51HI AGCGCT 1 cut(s) 885
AoxI GGCC 4 cut(s) 95, 180, 1848, 1912
ApaI GGGCCC 1 cut(s) 1916
ApoI RAATTY 5 cut(s) 237, 786, 940, 1623, 1970
AspLEI GCGC 1 cut(s) 886
AsuHPI GGTGA 5 cut(s) 116, 151, 821, 1007, 2168
AvaI CYCGRG 2 cut(s) 2034, 2254
AvaII GGWCC 7 cut(s) 812, 1118, 1139, 1526, 1652, 1661, 1870
BaeGI GKGCMC 1 cut(s) 1916
BanII GRGCYC 5 cut(s) 60, 410, 1916, 2035, 2163
BbsI GAAGAC 2 cut(s) 608, 1742
Bbv12I GWGCWC 3 cut(s) 1810, 2035, 2163
BccI CCATC 8 cut(s) 239, 410, 655, 859, 1472, 1552, 2021, 2249
BceAI ACGGC 2 cut(s) 313, 2279
BcgI CGANNNNNNTGC 2 cut(s) 2106, 2140
BciT130I CCWGG 5 cut(s) 102, 513, 865, 948, 1497
BclI TGATCA 1 cut(s) 781
BcoDI GTCTC 2 cut(s) 634, 679
BfaI CTAG 2 cut(s) 990, 1892
BfmI CTRYAG 8 cut(s) 678, 694, 725, 1505, 1656, 1837, 2095, 2145
BfoI RGCGCY 1 cut(s) 887
BfuAI ACCTGC 3 cut(s) 2144, 2152, 2185
BglI GCCNNNNNGGC 1 cut(s) 1501
Bme1390I CCNGG 5 cut(s) 102, 513, 865, 948, 1497
Bme18I GGWCC 7 cut(s) 812, 1118, 1139, 1526, 1652, 1661, 1870
BmeT110I CYCGRG 2 cut(s) 2034, 2254
BmgBI CACGTC 2 cut(s) 647, 2120
BmiI GGNNCC 6 cut(s) 407, 814, 1527, 1872, 1899, 1914
BmrFI CCNGG 5 cut(s) 102, 513, 865, 948, 1497
BmrI ACTGGG 1 cut(s) 1195
BmsI GCATC 4 cut(s) 609, 1264, 1396, 1876
BmuI ACTGGG 1 cut(s) 1195
BoxI GACNNNNGTC 1 cut(s) 2070
BpiI GAAGAC 2 cut(s) 608, 1742
BpmI CTGGAG 3 cut(s) 84, 727, 1242
BsaAI YACGTR 1 cut(s) 2024
BsaHI GRCGYC 1 cut(s) 2071
BsaI GGTCTC 2 cut(s) 634, 679
BsaJI CCNNGG 2 cut(s) 1851, 1916
BsaWI WCCGGW 1 cut(s) 1627
BsaXI ACNNNNNCTCC 2 cut(s) 1467, 1497
Bse118I RCCGGY 1 cut(s) 2112
Bse1I ACTGG 6 cut(s) 402, 710, 1190, 1225, 1792, 1863
Bse3DI GCAATG 3 cut(s) 492, 1086, 1098
BseBI CCWGG 5 cut(s) 102, 513, 865, 948, 1497
BseDI CCNNGG 2 cut(s) 1851, 1916
BseGI GGATG 3 cut(s) 535, 1732, 2241
BseMI GCAATG 3 cut(s) 492, 1086, 1098
BseMII CTCAG 6 cut(s) 513, 1171, 1455, 1482, 1545, 2020
BseNI ACTGG 6 cut(s) 402, 710, 1190, 1225, 1792, 1863
BseRI GAGGAG 3 cut(s) 1234, 2182, 2337
BseSI GKGCMC 1 cut(s) 1916
BseYI CCCAGC 2 cut(s) 1355, 1873
BshFI GGCC 4 cut(s) 97, 182, 1850, 1914
BsiHKAI GWGCWC 3 cut(s) 1810, 2035, 2163
BsiHKCI CYCGRG 2 cut(s) 2034, 2254
BsiSI CCGG 3 cut(s) 1628, 2063, 2113
BslFI GGGAC 4 cut(s) 970, 1087, 1092, 1372
BsmAI GTCTC 2 cut(s) 634, 679
BsmFI GGGAC 4 cut(s) 970, 1087, 1092, 1372
BsmI GAATGC 1 cut(s) 774
BsnI GGCC 4 cut(s) 97, 182, 1850, 1914
Bso31I GGTCTC 2 cut(s) 634, 679
BsoBI CYCGRG 2 cut(s) 2034, 2254
Bsp120I GGGCCC 1 cut(s) 1912
Bsp1286I GDGCHC 6 cut(s) 60, 410, 1810, 1916, 2035, 2163
Bsp1407I TGTACA 1 cut(s) 891
Bsp143I GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
Bsp19I CCATGG 2 cut(s) 1851, 1916
BspANI GGCC 4 cut(s) 97, 182, 1850, 1914
BspCNI CTCAG 6 cut(s) 514, 1170, 1456, 1483, 1546, 2019
BspLI GGNNCC 6 cut(s) 407, 814, 1527, 1872, 1899, 1914
BspMAI CTGCAG 5 cut(s) 698, 729, 1509, 2099, 2149
BspMI ACCTGC 3 cut(s) 2144, 2152, 2185
BspPI GGATC 3 cut(s) 458, 1574, 1993
BspQI GCTCTTC 1 cut(s) 378
BspTNI GGTCTC 2 cut(s) 634, 679
BsrBI CCGCTC 1 cut(s) 2050
BsrDI GCAATG 3 cut(s) 492, 1086, 1098
BsrFI RCCGGY 1 cut(s) 2112
BsrGI TGTACA 1 cut(s) 891
BsrI ACTGG 6 cut(s) 402, 710, 1190, 1225, 1792, 1863
BssAI RCCGGY 1 cut(s) 2112
BssECI CCNNGG 2 cut(s) 1851, 1916
BssMI GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
BssNAI GTATAC 1 cut(s) 1540
BssNI GRCGYC 1 cut(s) 2071
BssT1I CCWWGG 2 cut(s) 1851, 1916
Bst1107I GTATAC 1 cut(s) 1540
Bst2UI CCWGG 5 cut(s) 102, 513, 865, 948, 1497
Bst4CI ACNGT 5 cut(s) 214, 820, 1723, 1783, 2220
Bst6I CTCTTC 2 cut(s) 378, 831
BstACI GRCGYC 1 cut(s) 2071
BstAUI TGTACA 1 cut(s) 891
BstBAI YACGTR 1 cut(s) 2024
BstC8I GCNNGC 8 cut(s) 78, 184, 231, 1342, 1414, 2060, 2114, 2163
BstDEI CTNAG 6 cut(s) 522, 1157, 1464, 1491, 1554, 2006
BstDSI CCRYGG 2 cut(s) 1851, 1916
BstEII GGTNACC 1 cut(s) 456
BstF5I GGATG 3 cut(s) 535, 1732, 2241
BstH2I RGCGCY 1 cut(s) 887
BstHHI GCGC 1 cut(s) 886
BstKTI GATC 7 cut(s) 159, 466, 784, 1000, 1569, 1819, 1988
BstMAI GTCTC 2 cut(s) 634, 679
BstMBI GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
BstMWI GCNNNNNNNGC 9 cut(s) 1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
BstNI CCWGG 5 cut(s) 102, 513, 865, 948, 1497
BstNSI RCATGY 5 cut(s) 359, 570, 1178, 1340, 1355
BstPAI GACNNNNGTC 1 cut(s) 2070
BstPI GGTNACC 1 cut(s) 456
BstSCI CCNGG 5 cut(s) 100, 511, 863, 946, 1495
BstSFI CTRYAG 8 cut(s) 678, 694, 725, 1505, 1656, 1837, 2095, 2145
BstSLI GKGCMC 1 cut(s) 1916
BstV2I GAAGAC 2 cut(s) 608, 1742
BstXI CCANNNNNNTGG 1 cut(s) 281
BstZ17I GTATAC 1 cut(s) 1540
BsuRI GGCC 4 cut(s) 97, 182, 1850, 1914
BtgI CCRYGG 2 cut(s) 1851, 1916
BtrI CACGTC 2 cut(s) 647, 2120
BtsCI GGATG 3 cut(s) 535, 1732, 2241
BtsI GCAGTG 1 cut(s) 1423
BtsIMutI CAGTG 4 cut(s) 395, 703, 816, 1423
BveI ACCTGC 3 cut(s) 2144, 2152, 2185
Cac8I GCNNGC 8 cut(s) 78, 184, 231, 1342, 1414, 2060, 2114, 2163
CfoI GCGC 1 cut(s) 886
Cfr10I RCCGGY 1 cut(s) 2112
CseI GACGC 3 cut(s) 1783, 2278, 2298
Csp6I GTAC 5 cut(s) 684, 892, 1291, 1921, 2021
CviQI GTAC 5 cut(s) 684, 892, 1291, 1921, 2021
DdeI CTNAG 6 cut(s) 522, 1157, 1464, 1491, 1554, 2006
DpnI GATC 7 cut(s) 158, 465, 783, 999, 1568, 1818, 1987
DpnII GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
DrdI GACNNNNNNGTC 1 cut(s) 2090
DseDI GACNNNNNNGTC 1 cut(s) 2090
Eam1104I CTCTTC 2 cut(s) 378, 831
EarI CTCTTC 2 cut(s) 378, 831
EciI GGCGGA 3 cut(s) 2068, 2212, 2234
Ecl136II GAGCTC 2 cut(s) 2033, 2161
Eco130I CCWWGG 2 cut(s) 1851, 1916
Eco24I GRGCYC 5 cut(s) 60, 410, 1916, 2035, 2163
Eco31I GGTCTC 2 cut(s) 634, 679
Eco32I GATATC 2 cut(s) 1150, 1598
Eco47I GGWCC 7 cut(s) 812, 1118, 1139, 1526, 1652, 1661, 1870
Eco47III AGCGCT 1 cut(s) 885
Eco53kI GAGCTC 2 cut(s) 2033, 2161
Eco57I CTGAAG 3 cut(s) 492, 1352, 2301
Eco88I CYCGRG 2 cut(s) 2034, 2254
Eco91I GGTNACC 1 cut(s) 456
EcoICRI GAGCTC 2 cut(s) 2033, 2161
EcoO109I RGGNCCY 3 cut(s) 1652, 1870, 1912
EcoO65I GGTNACC 1 cut(s) 456
EcoRI GAATTC 1 cut(s) 237
EcoRII CCWGG 5 cut(s) 100, 511, 863, 946, 1495
EcoRV GATATC 2 cut(s) 1150, 1598
EcoT14I CCWWGG 2 cut(s) 1851, 1916
EcoT22I ATGCAT 1 cut(s) 1279
EcoT38I GRGCYC 5 cut(s) 60, 410, 1916, 2035, 2163
ErhI CCWWGG 2 cut(s) 1851, 1916
FalI AAGNNNNNCTT 2 cut(s) 604, 636
FaqI GGGAC 4 cut(s) 970, 1087, 1092, 1372
FauI CCCGC 1 cut(s) 1292
FbaI TGATCA 1 cut(s) 781
FblI GTMKAC 2 cut(s) 843, 1539
FokI GGATG 3 cut(s) 542, 1739, 2228
FriOI GRGCYC 5 cut(s) 60, 410, 1916, 2035, 2163
FspBI CTAG 2 cut(s) 990, 1892
GlaI GCGC 1 cut(s) 885
GsaI CCCAGC 2 cut(s) 1359, 1877
GsuI CTGGAG 3 cut(s) 84, 727, 1242
HaeII RGCGCY 1 cut(s) 887
HaeIII GGCC 4 cut(s) 97, 182, 1850, 1914
HapII CCGG 3 cut(s) 1628, 2063, 2113
HgaI GACGC 3 cut(s) 1783, 2278, 2298
HhaI GCGC 1 cut(s) 886
Hin1I GRCGYC 1 cut(s) 2071
Hin6I GCGC 1 cut(s) 884
HinP1I GCGC 1 cut(s) 884
HindIII AAGCTT 2 cut(s) 1342, 1382
HinfI GANTC 6 cut(s) 28, 174, 249, 745, 751, 1433
HpaII CCGG 3 cut(s) 1628, 2063, 2113
HphI GGTGA 5 cut(s) 116, 151, 821, 1007, 2168
Hpy166II GTNNAC 2 cut(s) 844, 1540
Hpy188I TCNGA 8 cut(s) 750, 1139, 1205, 1833, 2083, 2187, 2197, 2235
Hpy8I GTNNAC 2 cut(s) 844, 1540
Hpy99I CGWCG 4 cut(s) 1327, 1799, 2121, 2294
HpyAV CCTTC 8 cut(s) 76, 101, 467, 1376, 1643, 1724, 1903, 2008
HpyCH4III ACNGT 5 cut(s) 214, 820, 1723, 1783, 2220
HpyCH4IV ACGT 5 cut(s) 646, 1047, 2023, 2071, 2119
HpyF10VI GCNNNNNNNGC 9 cut(s) 1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
HpyF3I CTNAG 6 cut(s) 522, 1157, 1464, 1491, 1554, 2006
HpySE526I ACGT 5 cut(s) 646, 1047, 2023, 2071, 2119
Hsp92I GRCGYC 1 cut(s) 2071
HspAI GCGC 1 cut(s) 884
KroI GCCGGC 1 cut(s) 2112
KroNI GCCGGC 1 cut(s) 2114
Ksp22I TGATCA 1 cut(s) 781
Kzo9I GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 8 cut(s) 85, 352, 405, 881, 1189, 2030, 2047, 2055
LweI GCATC 4 cut(s) 609, 1264, 1396, 1876
MaeI CTAG 2 cut(s) 990, 1892
MaeII ACGT 5 cut(s) 646, 1047, 2023, 2071, 2119
MaeIII GTNAC 9 cut(s) 456, 476, 499, 701, 1181, 1486, 1783, 2041, 2072
MalI GATC 7 cut(s) 158, 465, 783, 999, 1568, 1818, 1987
MbiI CCGCTC 1 cut(s) 2050
MboI GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
MboII GAAGA 9 cut(s) 365, 608, 754, 846, 848, 862, 1014, 1684, 1747
MfeI CAATTG 2 cut(s) 921, 1678
MhlI GDGCHC 6 cut(s) 60, 410, 1810, 1916, 2035, 2163
MmeI TCCRAC 5 cut(s) 507, 1117, 2210, 2220, 2258
Mph1103I ATGCAT 1 cut(s) 1279
MroNI GCCGGC 1 cut(s) 2112
MseI TTAA 2 cut(s) 591, 1113
MslI CAYNNNNRTG 6 cut(s) 300, 398, 400, 1091, 1179, 1257
MspA1I CMGCKG 4 cut(s) 341, 1257, 2262, 2286
MspI CCGG 3 cut(s) 1628, 2063, 2113
MspR9I CCNGG 5 cut(s) 102, 513, 865, 948, 1497
MunI CAATTG 2 cut(s) 921, 1678
Mva1269I GAATGC 1 cut(s) 774
MvaI CCWGG 5 cut(s) 102, 513, 865, 948, 1497
MwoI GCNNNNNNNGC 9 cut(s) 1501, 1712, 1805, 1842, 2059, 2265, 2268, 2277, 2286
NaeI GCCGGC 1 cut(s) 2114
NcoI CCATGG 2 cut(s) 1851, 1916
NdeII GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
NgoMIV GCCGGC 1 cut(s) 2112
NlaIV GGNNCC 6 cut(s) 407, 814, 1527, 1872, 1899, 1914
NmuCI GTSAC 4 cut(s) 701, 1181, 2041, 2072
NsiI ATGCAT 1 cut(s) 1279
NspI RCATGY 5 cut(s) 359, 570, 1178, 1340, 1355
OliI CACNNNNGTG 3 cut(s) 398, 400, 1257
PaqCI CACCTGC 1 cut(s) 2144
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 1 cut(s) 774
PdiI GCCGGC 1 cut(s) 2114
PfeI GAWTC 6 cut(s) 28, 174, 249, 745, 751, 1433
PflFI GACNNNGTC 1 cut(s) 645
PflMI CCANNNNNTGG 3 cut(s) 259, 1067, 1355
Ppu21I YACGTR 1 cut(s) 2024
PpuMI RGGWCCY 2 cut(s) 1652, 1870
PshAI GACNNNNGTC 1 cut(s) 2070
PsiI TTATAA 1 cut(s) 225
Psp124BI GAGCTC 2 cut(s) 2035, 2163
Psp5II RGGWCCY 2 cut(s) 1652, 1870
Psp6I CCWGG 5 cut(s) 100, 511, 863, 946, 1495
PspEI GGTNACC 1 cut(s) 456
PspFI CCCAGC 2 cut(s) 1355, 1873
PspGI CCWGG 5 cut(s) 100, 511, 863, 946, 1495
PspN4I GGNNCC 6 cut(s) 407, 814, 1527, 1872, 1899, 1914
PspOMI GGGCCC 1 cut(s) 1912
PspPPI RGGWCCY 2 cut(s) 1652, 1870
PstI CTGCAG 5 cut(s) 698, 729, 1509, 2099, 2149
PsyI GACNNNGTC 1 cut(s) 645
PvuII CAGCTG 2 cut(s) 341, 2262
RsaI GTAC 5 cut(s) 685, 893, 1292, 1922, 2022
RsaNI GTAC 5 cut(s) 684, 892, 1291, 1921, 2021
RseI CAYNNNNRTG 6 cut(s) 300, 398, 400, 1091, 1179, 1257
SacI GAGCTC 2 cut(s) 2035, 2163
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 2 cut(s) 591, 1113
Sau3AI GATC 7 cut(s) 156, 463, 781, 997, 1566, 1816, 1985
ScrFI CCNGG 5 cut(s) 102, 513, 865, 948, 1497
SduI GDGCHC 6 cut(s) 60, 410, 1810, 1916, 2035, 2163
SfaNI GCATC 4 cut(s) 609, 1264, 1396, 1876
SfcI CTRYAG 8 cut(s) 678, 694, 725, 1505, 1656, 1837, 2095, 2145
SinI GGWCC 7 cut(s) 812, 1118, 1139, 1526, 1652, 1661, 1870
SmiMI CAYNNNNRTG 6 cut(s) 300, 398, 400, 1091, 1179, 1257
SspMI CTAG 2 cut(s) 990, 1892
SstI GAGCTC 2 cut(s) 2035, 2163
StyD4I CCNGG 5 cut(s) 100, 511, 863, 946, 1495
StyI CCWWGG 2 cut(s) 1851, 1916
TaaI ACNGT 5 cut(s) 214, 820, 1723, 1783, 2220
TaiI ACGT 5 cut(s) 649, 1050, 2026, 2074, 2122
TaqI TCGA 6 cut(s) 316, 376, 1000, 1322, 1882, 2202
TatI WGTACW 2 cut(s) 891, 1290
TauI GCSGC 5 cut(s) 1443, 1463, 2053, 2283, 2286
TfiI GAWTC 6 cut(s) 28, 174, 249, 745, 751, 1433
Tru1I TTAA 2 cut(s) 591, 1113
Tru9I TTAA 2 cut(s) 591, 1113
TscAI CASTG 4 cut(s) 402, 710, 823, 1423
TseFI GTSAC 4 cut(s) 701, 1181, 2041, 2072
Tsp45I GTSAC 4 cut(s) 701, 1181, 2041, 2072
TspDTI ATGAA 8 cut(s) 429, 546, 779, 942, 1040, 1464, 1707, 1743
TspGWI ACGGA 3 cut(s) 2060, 2082, 2100
TspRI CASTG 4 cut(s) 402, 710, 823, 1423
Tth111I GACNNNGTC 1 cut(s) 645
Van91I CCANNNNNTGG 3 cut(s) 259, 1067, 1355
VpaK11BI GGWCC 7 cut(s) 812, 1118, 1139, 1526, 1652, 1661, 1870
XapI RAATTY 5 cut(s) 237, 786, 940, 1623, 1970
XceI RCATGY 5 cut(s) 359, 570, 1178, 1340, 1355
XcmI CCANNNNNNNNNTGG 1 cut(s) 90
XmiI GTMKAC 2 cut(s) 843, 1539
XspI CTAG 2 cut(s) 990, 1892
ZraI GACGTC 1 cut(s) 2072
Zsp2I ATGCAT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.