Probable protein Pop3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17210 AT3G17210 |
| fragaria_vesca | FvH4_4g20800 FvH4_4g20800 |
| malus_domestica | MD13G1147600.v1.1 MD16G1147500.v1.1 |
| prunus_persica | Prupe.1G111200_v2.0.a1 Prupe.1G111200_v2.0.a1 |
| pyrus_communis | pycom13g12710 pycom16g12590 |
| rosa_chinensis | RchiOBHm_Chr1g0339351 RchiOBHm_Chr4g0426271 |
| rosa_laevigata | RLG00000007306 RLG00000029227 |
| rosa_multiflora | Rmu_sc0000613.1_g000003 Rmu_sc0000730.1_g000036 Rmu_sc0002989.1_g000002 Rmu_sc0020679.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00313430 Rroxscaffold_5G00368300 |
| rosa_rugosa | Rorug01G0142500.1 Rorug04G0209900 |
| rosa_samantha | Rh1AG159200 Rh1BG126300 Rh1CG148400 Rh4AG266900 Rh4BG272800 Rh4CG286800 Rh4DG269200 Rh4DG269400 |
| rosa_wichuraiana | Rw1G013560 Rw4G023070 Rw4G023090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 174 |
| AciI | CCGC | 1 cut(s) | 224 |
| AclWI | GGATC | 1 cut(s) | 113 |
| AfaI | GTAC | 1 cut(s) | 211 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| AjiI | CACGTC | 1 cut(s) | 151 |
| AluBI | AGCT | 3 cut(s) | 41, 201, 236 |
| AluI | AGCT | 3 cut(s) | 41, 201, 236 |
| AlwI | GGATC | 1 cut(s) | 113 |
| AsuHPI | GGTGA | 1 cut(s) | 34 |
| BfaI | CTAG | 1 cut(s) | 233 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BfuAI | ACCTGC | 1 cut(s) | 174 |
| BmcAI | AGTACT | 1 cut(s) | 211 |
| BmgBI | CACGTC | 1 cut(s) | 151 |
| BmrI | ACTGGG | 1 cut(s) | 148 |
| BmsI | GCATC | 1 cut(s) | 178 |
| BmuI | ACTGGG | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bse1I | ACTGG | 1 cut(s) | 143 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 238 |
| BseMII | CTCAG | 2 cut(s) | 54, 204 |
| BseNI | ACTGG | 1 cut(s) | 143 |
| BslFI | GGGAC | 1 cut(s) | 258 |
| BsmFI | GGGAC | 1 cut(s) | 258 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| Bsp19I | CCATGG | 1 cut(s) | 123 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspCNI | CTCAG | 2 cut(s) | 55, 205 |
| BspMI | ACCTGC | 1 cut(s) | 174 |
| BspPI | GGATC | 1 cut(s) | 113 |
| BsrI | ACTGG | 1 cut(s) | 143 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 1 cut(s) | 319 |
| BstDEI | CTNAG | 3 cut(s) | 42, 63, 213 |
| BstDSI | CCRYGG | 1 cut(s) | 123 |
| BstF5I | GGATG | 1 cut(s) | 238 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 242 |
| BstNSI | RCATGY | 1 cut(s) | 32 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BtgI | CCRYGG | 1 cut(s) | 123 |
| BtrI | CACGTC | 1 cut(s) | 151 |
| BtsCI | GGATG | 1 cut(s) | 238 |
| BtsIMutI | CAGTG | 1 cut(s) | 136 |
| BveI | ACCTGC | 1 cut(s) | 174 |
| Csp6I | GTAC | 1 cut(s) | 210 |
| CviAII | CATG | 4 cut(s) | 29, 124, 248, 278 |
| CviJI | RGCY | 5 cut(s) | 41, 93, 201, 218, 236 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 93, 201, 218, 236 |
| CviQI | GTAC | 1 cut(s) | 210 |
| DdeI | CTNAG | 3 cut(s) | 42, 63, 213 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| FaeI | CATG | 4 cut(s) | 32, 127, 251, 281 |
| FaiI | YATR | 5 cut(s) | 30, 125, 186, 249, 279 |
| FaqI | GGGAC | 1 cut(s) | 258 |
| FatI | CATG | 4 cut(s) | 28, 123, 247, 277 |
| FokI | GGATG | 1 cut(s) | 225 |
| FspBI | CTAG | 1 cut(s) | 233 |
| Hin1II | CATG | 4 cut(s) | 32, 127, 251, 281 |
| HinfI | GANTC | 2 cut(s) | 65, 194 |
| HphI | GGTGA | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 3 cut(s) | 70, 89, 329 |
| Hpy99I | CGWCG | 1 cut(s) | 152 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4III | ACNGT | 1 cut(s) | 319 |
| HpyCH4IV | ACGT | 1 cut(s) | 150 |
| HpyCH4V | TGCA | 2 cut(s) | 169, 260 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 3 cut(s) | 42, 63, 213 |
| HpySE526I | ACGT | 1 cut(s) | 150 |
| Hsp92II | CATG | 4 cut(s) | 32, 127, 251, 281 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LpnPI | CCDG | 4 cut(s) | 124, 179, 211, 255 |
| LweI | GCATC | 1 cut(s) | 178 |
| MaeI | CTAG | 1 cut(s) | 233 |
| MaeII | ACGT | 1 cut(s) | 150 |
| MaeIII | GTNAC | 1 cut(s) | 58 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 1 cut(s) | 124 |
| MlyI | GAGTC | 2 cut(s) | 74, 203 |
| MmeI | TCCRAC | 1 cut(s) | 48 |
| MnlI | CCTC | 3 cut(s) | 83, 113, 208 |
| MseI | TTAA | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 242 |
| NcoI | CCATGG | 1 cut(s) | 123 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 4 cut(s) | 32, 127, 251, 281 |
| NmuCI | GTSAC | 1 cut(s) | 58 |
| NspI | RCATGY | 1 cut(s) | 32 |
| PflFI | GACNNNGTC | 1 cut(s) | 64 |
| PleI | GAGTC | 2 cut(s) | 73, 202 |
| PpsI | GAGTC | 2 cut(s) | 73, 202 |
| PsyI | GACNNNGTC | 1 cut(s) | 64 |
| RsaI | GTAC | 1 cut(s) | 211 |
| RsaNI | GTAC | 1 cut(s) | 210 |
| SaqAI | TTAA | 1 cut(s) | 204 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| ScaI | AGTACT | 1 cut(s) | 211 |
| SchI | GAGTC | 2 cut(s) | 74, 203 |
| SetI | ASST | 7 cut(s) | 43, 105, 153, 168, 178, 203, 238 |
| SfaNI | GCATC | 1 cut(s) | 178 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SsiI | CCGC | 1 cut(s) | 224 |
| SspMI | CTAG | 1 cut(s) | 233 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TaaI | ACNGT | 1 cut(s) | 319 |
| TaiI | ACGT | 1 cut(s) | 153 |
| TatI | WGTACW | 1 cut(s) | 209 |
| Tru1I | TTAA | 1 cut(s) | 204 |
| Tru9I | TTAA | 1 cut(s) | 204 |
| TscAI | CASTG | 1 cut(s) | 143 |
| TseFI | GTSAC | 1 cut(s) | 58 |
| Tsp45I | GTSAC | 1 cut(s) | 58 |
| TspGWI | ACGGA | 1 cut(s) | 260 |
| TspRI | CASTG | 1 cut(s) | 143 |
| Tth111I | GACNNNGTC | 1 cut(s) | 64 |
| XceI | RCATGY | 1 cut(s) | 32 |
| XspI | CTAG | 1 cut(s) | 233 |
| ZrmI | AGTACT | 1 cut(s) | 211 |