Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000863.1

Orthogroup ID

OG0009307

Physical Location & Seq

Genomic Coordinates Forward (+)

164985 .. 166055

Gene Structure 1071 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

atggaaatggagcagctgttaagcatgggcttccccaccgacctcgccgccgaagccctcgctgccaccggcggcaactccgcactcaaagccaccgattggattctcaaccgcaattcctccaccacctccacctccactcccaccgccacctctcaacccaaactcgatcgcttcttcctctcccaatccccaaattcacaatcccaggacaaacaagaaccagaagaacaacagtccaccccaacctcccaactccccaagcgccgcaaacttctcgtcccggaaaccccgccgcccactacctccgataaacccgcaaccgccgcggcccaccaccagcccttgtcggagcgcatgcggcccaggaccctaaacgacgtcgtcggccaggaccacctcctcgccccaaactccctccttcgctccgctatcaaatgcgagcgtctcccttccctcgtcttctggggcccacccggcaccggcaagacctccatcgccaaagccatcatcaactccgcctcctcctcctccgccgcccggtcctaccggttcgtctcgctctccgccgtcaccgccggcgtcaaagacgtcagggacgccattgacgaggcccggaagaggaagaagctgaacggccagaggaccgttctcttcatcgacgaggttcacaggttcaacaaatcgcagcaggactctttcttgccggtgatcgaagacggcagcatagtcttcatgggcgccaccactgagaacccttctttccatttgatcacgccgctcttgtctcggtctcgagttcttgatcttcgacccttgagcccacaatatatagaggttcttctccggcgagcggcggaaaactccgatatagggttggctcggagcgtggggatgcaagtagatgtggaggaggaagtcattcgttttatctccgccaattgcgacggagatgctagagtggcactcaatgcattggaaatctcagccacaacagcagctgcccgagcctcgacgccggattcagtagctggtgttaccgtggaggatgccaaggaagcactgcaatgc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030174 GO:0031323 GO:0031326 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0071897 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901362 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc_2 MgsA_C UBA

Protein Analysis

357

Amino Acids

38.63

Weight (kDa)

6.55

Isoelectric Point (pI)

54.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_7	PF22562	3 - 38	1.8e-08	UBA-like domain
RuvB_N	PF05496	120 - 244	4e-10	Holliday junction DNA helicase RuvB P-loop domain
AAA_14	PF13173	153 - 274	5.4e-06	AAA domain
AAA	PF00004	154 - 266	2.9e-17	ATPase family associated with various cellular activities (AAA)
AAA_assoc_2	PF16193	300 - 356	1.8e-08	AAA C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24290
fragaria_vesca	FvH4_5g33930 FvH4_5g33930
malus_domestica	MD03G1299000.v1.1
pyrus_communis	pycom03g23710
rosa_chinensis	RchiOBHm_Chr7g0233321
rosa_laevigata	RLG00000001279
rosa_multiflora	Rmu_sc0000863.1_g000006 Rmu_sc0000863.1_g000007 Rmu_sc0000863.1_g000049 Rmu_sc0003865.1_g000005 Rmu_sc0010461.1_g000001
rosa_roxburghii	Rroxscaffold_3G00227410
rosa_rugosa	Rorug07G0279900 Rorug07G0279900
rosa_samantha	Rh7AG435800 Rh7BG408100 Rh7BG408500 Rh7CG455000 Rh7DG424500 Rh7DG424900
rosa_wichuraiana	Rw7G035840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	384, 594
AccB1I	GGYRCC	2 cut(s)	479, 740
AccB7I	CCANNNNNTGG	1 cut(s)	99
AccBSI	CCGCTC	2 cut(s)	781, 854
AccII	CGCG	1 cut(s)	329
AcoI	YGGCCR	2 cut(s)	388, 637
AcsI	RAATTY	1 cut(s)	196
AcyI	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
AfiI	CCNNNNNNNGG	6 cut(s)	99, 482, 540, 621, 853, 873
AgeI	ACCGGT	1 cut(s)	549
AgsI	TTSAA	1 cut(s)	679
AjnI	CCWGG	3 cut(s)	207, 365, 390
AluBI	AGCT	4 cut(s)	16, 631, 1001, 1031
AluI	AGCT	4 cut(s)	16, 631, 1001, 1031
Alw26I	GTCTC	4 cut(s)	452, 562, 792, 798
AlwNI	CAGNNNCTG	2 cut(s)	1001, 1031
Ama87I	CYCGRG	2 cut(s)	795, 1005
AoxI	GGCC	6 cut(s)	330, 362, 388, 469, 612, 637
ApaI	GGGCCC	1 cut(s)	473
ApeKI	GCWGC	6 cut(s)	13, 62, 688, 723, 998, 1001
ApoI	RAATTY	1 cut(s)	196
ArsI	GACNNNNNNTTYG	2 cut(s)	264, 296
AsiGI	ACCGGT	1 cut(s)	549
Asp700I	GAANNNNTTC	1 cut(s)	921
AspLEI	GCGC	3 cut(s)	267, 357, 743
AspS9I	GGNCC	9 cut(s)	331, 363, 369, 394, 469, 470, 543, 613, 645
AsuC2I	CCSGG	4 cut(s)	284, 477, 541, 616
AsuHPI	GGTGA	2 cut(s)	565, 721
AvaI	CYCGRG	2 cut(s)	795, 1005
AvaII	GGWCC	4 cut(s)	369, 394, 543, 645
BaeGI	GKGCMC	1 cut(s)	473
BanI	GGYRCC	2 cut(s)	479, 740
BanII	GRGCYC	2 cut(s)	473, 824
BbsI	GAAGAC	3 cut(s)	454, 723, 724
BbvI	GCAGC	6 cut(s)	25, 49, 700, 735, 988, 1010
BccI	CCATC	2 cut(s)	503, 515
BceAI	ACGGC	3 cut(s)	554, 652, 736
BcgI	CGANNNNNNTGC	4 cut(s)	259, 293, 935, 969
BciT130I	CCWGG	3 cut(s)	209, 367, 392
BclI	TGATCA	1 cut(s)	771
BcnI	CCSGG	4 cut(s)	284, 477, 541, 616
BcoDI	GTCTC	4 cut(s)	452, 562, 792, 798
BfaI	CTAG	1 cut(s)	957
BfoI	RGCGCY	2 cut(s)	268, 744
BglI	GCCNNNNNGGC	1 cut(s)	477
Bme1390I	CCNGG	7 cut(s)	209, 284, 367, 392, 477, 541, 616
Bme18I	GGWCC	4 cut(s)	369, 394, 543, 645
BmeT110I	CYCGRG	2 cut(s)	795, 1005
BmgT120I	GGNCC	9 cut(s)	331, 363, 369, 394, 469, 470, 543, 613, 645
BmiI	GGNNCC	5 cut(s)	371, 470, 471, 481, 742
BmrFI	CCNGG	7 cut(s)	209, 284, 367, 392, 477, 541, 616
BmsI	GCATC	3 cut(s)	885, 943, 1039
BpiI	GAAGAC	3 cut(s)	454, 723, 724
BplI	GAGNNNNNCTC	2 cut(s)	951, 983
BpuEI	CTTGAG	1 cut(s)	838
BpuMI	CCSGG	4 cut(s)	284, 477, 541, 616
BsaHI	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
BsaI	GGTCTC	1 cut(s)	798
BsaJI	CCNNGG	5 cut(s)	207, 327, 365, 1041, 1053
BsaWI	WCCGGW	1 cut(s)	549
BsaXI	ACNNNNNCTCC	5 cut(s)	32, 124, 154, 506, 536
Bsc4I	CCNNNNNNNGG	6 cut(s)	99, 482, 540, 621, 853, 873
Bse118I	RCCGGY	5 cut(s)	68, 482, 549, 578, 706
BseBI	CCWGG	3 cut(s)	209, 367, 392
BseDI	CCNNGG	5 cut(s)	207, 327, 365, 1041, 1053
BseGI	GGATG	2 cut(s)	900, 1054
BseLI	CCNNNNNNNGG	6 cut(s)	99, 482, 540, 621, 853, 873
BseMII	CTCAG	2 cut(s)	741, 999
BseRI	GAGGAG	5 cut(s)	392, 514, 517, 520, 926
BseSI	GKGCMC	1 cut(s)	473
BseXI	GCAGC	6 cut(s)	25, 49, 700, 735, 988, 1010
Bsh1236I	CGCG	1 cut(s)	329
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	6 cut(s)	332, 364, 390, 471, 614, 639
BshNI	GGYRCC	2 cut(s)	479, 740
BshTI	ACCGGT	1 cut(s)	549
BsiEI	CGRYCG	1 cut(s)	172
BsiHKCI	CYCGRG	2 cut(s)	795, 1005
BslFI	GGGAC	2 cut(s)	266, 611
BslI	CCNNNNNNNGG	6 cut(s)	99, 482, 540, 621, 853, 873
BsmAI	GTCTC	4 cut(s)	452, 562, 792, 798
BsmBI	CGTCTC	2 cut(s)	452, 562
BsmFI	GGGAC	2 cut(s)	266, 611
BsnI	GGCC	6 cut(s)	332, 364, 390, 471, 614, 639
Bso31I	GGTCTC	1 cut(s)	798
BsoBI	CYCGRG	2 cut(s)	795, 1005
Bsp120I	GGGCCC	1 cut(s)	469
Bsp1286I	GDGCHC	2 cut(s)	473, 824
Bsp143I	GATC	4 cut(s)	169, 711, 771, 805
BspANI	GGCC	6 cut(s)	332, 364, 390, 471, 614, 639
BspCNI	CTCAG	2 cut(s)	742, 998
BspFNI	CGCG	1 cut(s)	329
BspLI	GGNNCC	5 cut(s)	371, 470, 471, 481, 742
BspT107I	GGYRCC	2 cut(s)	479, 740
BspTNI	GGTCTC	1 cut(s)	798
BsrBI	CCGCTC	2 cut(s)	781, 854
BsrFI	RCCGGY	5 cut(s)	68, 482, 549, 578, 706
BssAI	RCCGGY	5 cut(s)	68, 482, 549, 578, 706
BssECI	CCNNGG	5 cut(s)	207, 327, 365, 1041, 1053
BssMI	GATC	4 cut(s)	169, 711, 771, 805
BssNI	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
BssT1I	CCWWGG	1 cut(s)	1053
Bst2UI	CCWGG	3 cut(s)	209, 367, 392
Bst4CI	ACNGT	3 cut(s)	237, 649, 1042
Bst6I	CTCTTC	2 cut(s)	614, 659
BstACI	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstC8I	GCNNGC	4 cut(s)	359, 443, 580, 852
BstDEI	CTNAG	2 cut(s)	750, 985
BstDSI	CCRYGG	2 cut(s)	327, 1041
BstF5I	GGATG	2 cut(s)	900, 1054
BstFNI	CGCG	1 cut(s)	329
BstH2I	RGCGCY	2 cut(s)	268, 744
BstHHI	GCGC	3 cut(s)	267, 357, 743
BstKTI	GATC	4 cut(s)	172, 714, 774, 808
BstMAI	GTCTC	4 cut(s)	452, 562, 792, 798
BstMBI	GATC	4 cut(s)	169, 711, 771, 805
BstMCI	CGRYCG	1 cut(s)	172
BstNI	CCWGG	3 cut(s)	209, 367, 392
BstNSI	RCATGY	1 cut(s)	361
BstSCI	CCNGG	7 cut(s)	207, 282, 365, 390, 475, 539, 614
BstSLI	GKGCMC	1 cut(s)	473
BstUI	CGCG	1 cut(s)	329
BstV1I	GCAGC	6 cut(s)	25, 49, 700, 735, 988, 1010
BstV2I	GAAGAC	3 cut(s)	454, 723, 724
BsuRI	GGCC	6 cut(s)	332, 364, 390, 471, 614, 639
BtgI	CCRYGG	2 cut(s)	327, 1041
BtgZI	GCGATG	1 cut(s)	481
BtsCI	GGATG	2 cut(s)	900, 1054
BtsI	GCAGTG	1 cut(s)	1061
BtsIMutI	CAGTG	2 cut(s)	747, 1061
Cac8I	GCNNGC	4 cut(s)	359, 443, 580, 852
CaiI	CAGNNNCTG	2 cut(s)	1001, 1031
CfoI	GCGC	3 cut(s)	267, 357, 743
Cfr10I	RCCGGY	5 cut(s)	68, 482, 549, 578, 706
Cfr13I	GGNCC	9 cut(s)	331, 363, 369, 394, 469, 470, 543, 613, 645
Cfr42I	CCGCGG	1 cut(s)	330
CseI	GACGC	4 cut(s)	434, 571, 608, 1024
CspAI	ACCGGT	1 cut(s)	549
CviAII	CATG	3 cut(s)	25, 358, 736
DdeI	CTNAG	2 cut(s)	750, 985
DinI	GGCGCC	1 cut(s)	742
DpnI	GATC	4 cut(s)	171, 713, 773, 807
DpnII	GATC	4 cut(s)	169, 711, 771, 805
EaeI	YGGCCR	2 cut(s)	388, 637
Eam1104I	CTCTTC	2 cut(s)	614, 659
EarI	CTCTTC	2 cut(s)	614, 659
EciI	GGCGGA	5 cut(s)	508, 523, 556, 872, 925
Eco130I	CCWWGG	1 cut(s)	1053
Eco24I	GRGCYC	2 cut(s)	473, 824
Eco31I	GGTCTC	1 cut(s)	798
Eco47I	GGWCC	4 cut(s)	369, 394, 543, 645
Eco88I	CYCGRG	2 cut(s)	795, 1005
EcoO109I	RGGNCCY	2 cut(s)	369, 469
EcoRII	CCWGG	3 cut(s)	207, 365, 390
EcoT14I	CCWWGG	1 cut(s)	1053
EcoT22I	ATGCAT	1 cut(s)	976
EcoT38I	GRGCYC	2 cut(s)	473, 824
EgeI	GGCGCC	1 cut(s)	742
EheI	GGCGCC	1 cut(s)	742
ErhI	CCWWGG	1 cut(s)	1053
Esp3I	CGTCTC	2 cut(s)	452, 562
FaeI	CATG	3 cut(s)	28, 361, 739
FaiI	YATR	7 cut(s)	26, 359, 728, 737, 831, 833, 872
FaqI	GGGAC	2 cut(s)	266, 611
FatI	CATG	3 cut(s)	24, 357, 735
FauI	CCCGC	2 cut(s)	300, 325
FbaI	TGATCA	1 cut(s)	771
FokI	GGATG	2 cut(s)	907, 1061
FriOI	GRGCYC	2 cut(s)	473, 824
FspBI	CTAG	1 cut(s)	957
GlaI	GCGC	3 cut(s)	266, 356, 742
HaeII	RGCGCY	2 cut(s)	268, 744
HaeIII	GGCC	6 cut(s)	332, 364, 390, 471, 614, 639
HgaI	GACGC	4 cut(s)	434, 571, 608, 1024
HhaI	GCGC	3 cut(s)	267, 357, 743
Hin1I	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
Hin1II	CATG	3 cut(s)	28, 361, 739
Hin6I	GCGC	3 cut(s)	265, 355, 741
HinP1I	GCGC	3 cut(s)	265, 355, 741
HinfI	GANTC	3 cut(s)	103, 695, 1022
HphI	GGTGA	2 cut(s)	565, 721
Hpy166II	GTNNAC	2 cut(s)	240, 670
Hpy188I	TCNGA	4 cut(s)	310, 352, 868, 885
Hpy188III	TCNNGA	2 cut(s)	795, 803
Hpy8I	GTNNAC	2 cut(s)	240, 670
Hpy99I	CGWCG	6 cut(s)	383, 386, 389, 665, 950, 1018
HpyAV	CCTTC	3 cut(s)	431, 462, 768
HpyCH4III	ACNGT	3 cut(s)	237, 649, 1042
HpyCH4IV	ACGT	2 cut(s)	381, 591
HpyCH4V	TGCA	3 cut(s)	898, 974, 1066
HpyF3I	CTNAG	2 cut(s)	750, 985
HpySE526I	ACGT	2 cut(s)	381, 591
Hsp92I	GRCGYC	6 cut(s)	381, 582, 591, 600, 741, 1016
Hsp92II	CATG	3 cut(s)	28, 361, 739
HspAI	GCGC	3 cut(s)	265, 355, 741
KasI	GGCGCC	1 cut(s)	740
KroI	GCCGGC	1 cut(s)	578
KroNI	GCCGGC	1 cut(s)	580
Ksp22I	TGATCA	1 cut(s)	771
KspI	CCGCGG	1 cut(s)	330
Kzo9I	GATC	4 cut(s)	169, 711, 771, 805
LmnI	GCTCC	4 cut(s)	10, 352, 431, 885
Lsp1109I	GCAGC	6 cut(s)	25, 49, 700, 735, 988, 1010
LweI	GCATC	3 cut(s)	885, 943, 1039
MaeI	CTAG	1 cut(s)	957
MaeII	ACGT	2 cut(s)	381, 591
MaeIII	GTNAC	2 cut(s)	571, 1036
MalI	GATC	4 cut(s)	171, 713, 773, 807
MbiI	CCGCTC	2 cut(s)	781, 854
MboI	GATC	4 cut(s)	169, 711, 771, 805
MfeI	CAATTG	1 cut(s)	940
MhlI	GDGCHC	2 cut(s)	473, 824
MluCI	AATT	3 cut(s)	115, 196, 940
Mly113I	GGCGCC	1 cut(s)	741
MlyI	GAGTC	1 cut(s)	689
MmeI	TCCRAC	1 cut(s)	330
Mph1103I	ATGCAT	1 cut(s)	976
MreI	CGCCGGCG	1 cut(s)	578
MroNI	GCCGGC	1 cut(s)	578
MroXI	GAANNNNTTC	1 cut(s)	921
MseI	TTAA	1 cut(s)	20
MslI	CAYNNNNRTG	1 cut(s)	1066
MspA1I	CMGCKG	3 cut(s)	16, 329, 1001
MspR9I	CCNGG	7 cut(s)	209, 284, 367, 392, 477, 541, 616
MunI	CAATTG	1 cut(s)	940
MvaI	CCWGG	3 cut(s)	209, 367, 392
MvnI	CGCG	1 cut(s)	329
NaeI	GCCGGC	1 cut(s)	580
NarI	GGCGCC	1 cut(s)	741
NciI	CCSGG	4 cut(s)	284, 477, 541, 616
NdeII	GATC	4 cut(s)	169, 711, 771, 805
NgoMIV	GCCGGC	1 cut(s)	578
NlaIII	CATG	3 cut(s)	28, 361, 739
NlaIV	GGNNCC	5 cut(s)	371, 470, 471, 481, 742
NmuCI	GTSAC	1 cut(s)	571
NsiI	ATGCAT	1 cut(s)	976
NspI	RCATGY	1 cut(s)	361
PaeI	GCATGC	1 cut(s)	361
PaeR7I	CTCGAG	1 cut(s)	795
PcsI	WCGNNNNNNNCGW	1 cut(s)	606
PdiI	GCCGGC	1 cut(s)	580
PdmI	GAANNNNTTC	1 cut(s)	921
PfeI	GAWTC	2 cut(s)	103, 1022
PflFI	GACNNNGTC	1 cut(s)	383
PflMI	CCANNNNNTGG	1 cut(s)	99
PfoI	TCCNGGA	1 cut(s)	282
PinAI	ACCGGT	1 cut(s)	549
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	1 cut(s)	689
PluTI	GGCGCC	1 cut(s)	744
PpsI	GAGTC	1 cut(s)	689
PpuMI	RGGWCCY	1 cut(s)	369
Psp5II	RGGWCCY	1 cut(s)	369
Psp6I	CCWGG	3 cut(s)	207, 365, 390
PspGI	CCWGG	3 cut(s)	207, 365, 390
PspN4I	GGNNCC	5 cut(s)	371, 470, 471, 481, 742
PspOMI	GGGCCC	1 cut(s)	469
PspPI	GGNCC	9 cut(s)	331, 363, 369, 394, 469, 470, 543, 613, 645
PspPPI	RGGWCCY	1 cut(s)	369
PstNI	CAGNNNCTG	2 cut(s)	1001, 1031
PsyI	GACNNNGTC	1 cut(s)	383
PvuI	CGATCG	1 cut(s)	172
PvuII	CAGCTG	2 cut(s)	16, 1001
RseI	CAYNNNNRTG	1 cut(s)	1066
SacII	CCGCGG	1 cut(s)	330
SaqAI	TTAA	1 cut(s)	20
Sau3AI	GATC	4 cut(s)	169, 711, 771, 805
Sau96I	GGNCC	9 cut(s)	331, 363, 369, 394, 469, 470, 543, 613, 645
SchI	GAGTC	1 cut(s)	689
ScrFI	CCNGG	7 cut(s)	209, 284, 367, 392, 477, 541, 616
SduI	GDGCHC	2 cut(s)	473, 824
SfaNI	GCATC	3 cut(s)	885, 943, 1039
SfoI	GGCGCC	1 cut(s)	742
Sfr274I	CTCGAG	1 cut(s)	795
Sfr303I	CCGCGG	1 cut(s)	330
SgrAI	CRCCGGYG	2 cut(s)	68, 578
SgrBI	CCGCGG	1 cut(s)	330
SinI	GGWCC	4 cut(s)	369, 394, 543, 645
SlaI	CTCGAG	1 cut(s)	795
SmiMI	CAYNNNNRTG	1 cut(s)	1066
SmlI	CTYRAG	2 cut(s)	795, 817
SmoI	CTYRAG	2 cut(s)	795, 817
SphI	GCATGC	1 cut(s)	361
Sse9I	AATT	3 cut(s)	115, 196, 940
SspDI	GGCGCC	1 cut(s)	740
SspMI	CTAG	1 cut(s)	957
StyD4I	CCNGG	7 cut(s)	207, 282, 365, 390, 475, 539, 614
StyI	CCWWGG	1 cut(s)	1053
TaaI	ACNGT	3 cut(s)	237, 649, 1042
TaiI	ACGT	2 cut(s)	384, 594
TaqI	TCGA	6 cut(s)	168, 660, 714, 796, 811, 1013
TaqII	GACCGA	1 cut(s)	780
TasI	AATT	3 cut(s)	115, 196, 940
TfiI	GAWTC	2 cut(s)	103, 1022
Tru1I	TTAA	1 cut(s)	20
Tru9I	TTAA	1 cut(s)	20
TscAI	CASTG	2 cut(s)	754, 1068
TseFI	GTSAC	1 cut(s)	571
TseI	GCWGC	6 cut(s)	13, 62, 688, 723, 998, 1001
Tsp45I	GTSAC	1 cut(s)	571
TspDTI	ATGAA	2 cut(s)	646, 724
TspGWI	ACGGA	1 cut(s)	963
TspRI	CASTG	2 cut(s)	754, 1068
Tth111I	GACNNNGTC	1 cut(s)	383
Van91I	CCANNNNNTGG	1 cut(s)	99
VpaK11BI	GGWCC	4 cut(s)	369, 394, 543, 645
XapI	RAATTY	1 cut(s)	196
XceI	RCATGY	1 cut(s)	361
XhoI	CTCGAG	1 cut(s)	795
XmnI	GAANNNNTTC	1 cut(s)	921
XspI	CTAG	1 cut(s)	957
ZraI	GACGTC	2 cut(s)	382, 592
Zsp2I	ATGCAT	1 cut(s)	976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.