Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001035.1

Orthogroup ID

OG0007107

Physical Location & Seq

Genomic Coordinates Forward (+)

141009 .. 147151

Gene Structure 6143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

atgcttgtggacgacatcggaccagtggcgttgtgttgctcggtggtcttcaccaccacgactgccgttctcatgtcctttggtacctctttccttcttttgcagactattcaggtatggagaatgatggtggacaaacctctggcctctggaagtgaagctttggtcgatgcctctttctttgcagcttggtggtcagcagccatggcggctggtttctctgcagcagctctatgtggttttagatctagggttggttttggttattgttgggcttttgggcctcggcgggaactaaaagaagttagaacattcaagtttttggggattcgcacattttccatttggggcttcgccgacgaaatcaaaaccctaaaatttttcaaattggaaacccacccgaaaactcacacagacaatatgagaggcagtcggcgacccaagccgtcgatgaacccacggccgccgccaccatcaacgccgctcgagcacttccgccaccgcgactccgacgcaagcttcgcaagcagccgcccctcctcgatcggaatcggcggcggtcccggcggctccatcgccaacgtcgacctatacaaagaccgctcctaccagcaatccgcgctctccgccatcaattcctacctttcctctcactccgtccaggtcttcctcaaattcccgatccctcccgccagagagatcaccgaagccctgaaattcctcgtcgcccggctcgattggccatcgccgaagctcgaagacgacctcccggtgattctgaaatccctgaaatgccctttcaagctcaacaagtccatgattcgaaaccccacggtgaattcgcaccagtggccgaatctgctcgctgtgattcactggctgttccagcttgttcgttacaacgatcacctggagcagaattccgaggcgtttctggacaacaaccctgtgggtcagtacacgttgcagagctacttgcattatataaggggccaagatgatgaagccgaggaggtggatcgagagtttgtggggaagttcgagaggcagagggacgaatcggaggagcaattgaaggttctgcagcagcatgcgacggagctggaggcggaagtggaggccttgaggtcggagccgtcgcctaaggaggcattggagagggagaagactatgctggaagaggatgtgagcaagttccatgagatgattgacaatctcgacaagaatgtgaagaaactgcagaaagttttggaggagaaagagaaggcattggaggccaagagggaagagaagaagaggattttacaggagaatgaggagctgaagaagagagtcgaatcgcagagttttaatgagagggatgtggagagaatgaagagggaattgcaggctgtggagagggacattggggaagccgagctggctaggaatgtgtgggaggagaaggtttgggaattggataacacgctcggcccaaaggttaaggagttggaggctttggcaatggagtgcaaccaagtcatgaggaggttgaaactttgtaatggctttcagtatgtattgaatcctaagggatcaacacctgctgaggtgatgggagttgactataaatcaactttaaagcctgcacttgactcatactctcaaaaaataaagaaggattctgtggaaacactggatgggttgattttgcttcagcatcagtcgagtgcactttctgctgatattgaggaaaaaagaaatgatatatcaacacttcagtcacgtcttgatgaagtggaagatcaattgaattcattaaggaaagagacacaggactatactcatagatgtgaagaagaagctagaaatatgatggatgaagttaaaaaggaggctcatgacatgaatattgtggaaagagaagcagctgagattctgaagacttccaaattgaaattgcgggaagtaactaaacaaactgaagaagagactcagaggtgtgcttgcgaactcgttgccataattgactcggtctcaaaatacaaagaacatgtgcagtcaaagattgaagaaatgaatagagatgtctccgatacagcagctatgttatcagatattcacaaaggttcgttgcaatcccagtacagttttccgttcgattcaagccaacgctctgaatcaactgaagccggcaaggtctatcagcttcagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0003674 GO:0005198 GO:0005200 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006996 GO:0007010 GO:0007049 GO:0007059 GO:0007080 GO:0008150 GO:0008608 GO:0009987 GO:0016043 GO:0022402 GO:0031262 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0098687 GO:0098813 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndc80_HEC

Protein Analysis

731

Amino Acids

83.62

Weight (kDa)

5.62

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ndc80_HEC	PF03801	199 - 303	1.4e-15	HEC/Ndc80p family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54630
fragaria_vesca	FvH4_5g35831
malus_domestica	MD08G1226900.v1.1 MD15G1419200.v1.1
prunus_persica	Prupe.1G564000_v2.0.a1
pyrus_communis	pycom08g19790 pycom15g37210
rosa_chinensis	RchiOBHm_Chr5g0046031
rosa_laevigata	RLG00000034393
rosa_multiflora	Rmu_co8491665.1_g000002 Rmu_sc0001035.1_g000029 Rmu_sc0001212.1_g000011
rosa_roxburghii	Rroxscaffold_1G00035270 Rroxscaffold_1G00035320 Rroxscaffold_3G00224020
rosa_rugosa	Rorug05G0226200 Rorug07G0304000
rosa_samantha	Rh5AG306800 Rh5BG315500 Rh5CG341700 Rh5CG342000 Rh5DG325500
rosa_wichuraiana	Rw0G011960 Rw5G028710 Rw7G038200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1591
Acc36I	ACCTGC	1 cut(s)	1591
Acc65I	GGTACC	1 cut(s)	83
AccB1I	GGYRCC	1 cut(s)	83
AccBSI	CCGCTC	2 cut(s)	484, 603
AccI	GTMKAC	1 cut(s)	585
AccII	CGCG	2 cut(s)	504, 620
AclWI	GGATC	3 cut(s)	676, 1026, 1582
AcoI	YGGCCR	3 cut(s)	461, 740, 851
AcsI	RAATTY	6 cut(s)	377, 674, 716, 838, 919, 1792
AcuI	CTGAAG	7 cut(s)	1343, 1679, 1742, 1940, 1983, 2174, 2187
AfaI	GTAC	3 cut(s)	85, 959, 2126
AflIII	ACRYGT	2 cut(s)	960, 2032
AjiI	CACGTC	1 cut(s)	1766
AjnI	CCWGG	2 cut(s)	660, 909
Alw21I	GWGCWC	2 cut(s)	492, 1714
Alw26I	GTCTC	4 cut(s)	1802, 1964, 2020, 2074
Alw44I	GTGCAC	1 cut(s)	1710
AlwI	GGATC	3 cut(s)	676, 1026, 1582
Ama87I	CYCGRG	1 cut(s)	485
AoxI	GGCC	9 cut(s)	144, 281, 461, 740, 851, 991, 1119, 1275, 1471
ApaLI	GTGCAC	1 cut(s)	1710
ApeKI	GCWGC	9 cut(s)	185, 200, 224, 227, 528, 1084, 1087, 1907, 2081
ApoI	RAATTY	6 cut(s)	377, 674, 716, 838, 919, 1792
ArsI	GACNNNNNNTTYG	2 cut(s)	503, 535
Asp718I	GGTACC	1 cut(s)	83
AspLEI	GCGC	1 cut(s)	622
AspS9I	GGNCC	5 cut(s)	20, 281, 560, 991, 1472
AsuC2I	CCSGG	3 cut(s)	564, 730, 770
AsuHPI	GGTGA	6 cut(s)	43, 694, 784, 847, 899, 1603
AsuII	TTCGAA	1 cut(s)	823
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	2 cut(s)	20, 560
AxyI	CCTNAGG	2 cut(s)	1143, 1569
BaeGI	GKGCMC	1 cut(s)	1714
BalI	TGGCCA	1 cut(s)	742
BanI	GGYRCC	1 cut(s)	83
BbsI	GAAGAC	5 cut(s)	40, 658, 765, 1172, 1928
Bbv12I	GWGCWC	2 cut(s)	492, 1714
BbvCI	CCTCAGC	1 cut(s)	1587
BbvI	GCAGC	9 cut(s)	197, 212, 236, 239, 540, 1096, 1099, 1919, 2093
BccI	CCATC	8 cut(s)	121, 481, 581, 638, 751, 1588, 1673, 1849
BceAI	ACGGC	4 cut(s)	50, 430, 476, 1120
BcgI	CGANNNNNNTGC	2 cut(s)	1979, 2013
BciT130I	CCWGG	2 cut(s)	662, 911
BcnI	CCSGG	3 cut(s)	564, 730, 770
BcoDI	GTCTC	4 cut(s)	1802, 1964, 2020, 2074
BfaI	CTAG	3 cut(s)	249, 1425, 1845
BfmI	CTRYAG	3 cut(s)	222, 1082, 1238
BfuAI	ACCTGC	1 cut(s)	1591
BglI	GCCNNNNNGGC	2 cut(s)	209, 1421
BglII	AGATCT	1 cut(s)	245
Bme1390I	CCNGG	5 cut(s)	564, 662, 730, 770, 911
Bme18I	GGWCC	2 cut(s)	20, 560
BmeT110I	CYCGRG	1 cut(s)	485
BmgBI	CACGTC	1 cut(s)	1766
BmgT120I	GGNCC	5 cut(s)	20, 281, 560, 991, 1472
BmiI	GGNNCC	5 cut(s)	85, 562, 571, 992, 1134
BmrFI	CCNGG	5 cut(s)	564, 662, 730, 770, 911
BmrI	ACTGGG	1 cut(s)	2116
BmsI	GCATC	2 cut(s)	160, 1708
BmuI	ACTGGG	1 cut(s)	2116
BpiI	GAAGAC	5 cut(s)	40, 658, 765, 1172, 1928
BpmI	CTGGAG	2 cut(s)	932, 1124
Bpu10I	CCTNAGC	1 cut(s)	1587
Bpu14I	TTCGAA	1 cut(s)	823
BpuEI	CTTGAG	1 cut(s)	1144
BpuMI	CCSGG	3 cut(s)	564, 730, 770
BsaBI	GATNNNNATC	1 cut(s)	548
BsaI	GGTCTC	1 cut(s)	2020
BsaJI	CCNNGG	6 cut(s)	204, 284, 458, 831, 924, 1008
BsaXI	ACNNNNNCTCC	2 cut(s)	491, 521
Bse118I	RCCGGY	1 cut(s)	2171
Bse1I	ACTGG	5 cut(s)	23, 847, 881, 1680, 2122
Bse21I	CCTNAGG	2 cut(s)	1143, 1569
Bse3DI	GCAATG	1 cut(s)	1509
Bse8I	GATNNNNATC	1 cut(s)	548
BseBI	CCWGG	2 cut(s)	662, 911
BseDI	CCNNGG	6 cut(s)	204, 284, 458, 831, 924, 1008
BseGI	GGATG	4 cut(s)	1189, 1366, 1684, 1864
BseJI	GATNNNNATC	1 cut(s)	548
BseMI	GCAATG	1 cut(s)	1509
BseMII	CTCAG	3 cut(s)	1578, 1902, 1988
BseNI	ACTGG	5 cut(s)	23, 847, 881, 1680, 2122
BseRI	GAGGAG	7 cut(s)	529, 1025, 1079, 1268, 1331, 1454, 1540
BseSI	GKGCMC	1 cut(s)	1714
BseX3I	CGGCCG	1 cut(s)	461
BseXI	GCAGC	9 cut(s)	197, 212, 236, 239, 540, 1096, 1099, 1919, 2093
BsgI	GTGCAG	2 cut(s)	1611, 2057
Bsh1236I	CGCG	2 cut(s)	504, 620
Bsh1285I	CGRYCG	2 cut(s)	464, 546
BshFI	GGCC	9 cut(s)	146, 283, 463, 742, 853, 993, 1121, 1277, 1473
BshNI	GGYRCC	1 cut(s)	83
BsiEI	CGRYCG	2 cut(s)	464, 546
BsiHKAI	GWGCWC	2 cut(s)	492, 1714
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	4 cut(s)	564, 730, 770, 2172
BslFI	GGGAC	3 cut(s)	546, 1067, 1415
BsmAI	GTCTC	4 cut(s)	1802, 1964, 2020, 2074
BsmFI	GGGAC	3 cut(s)	546, 1067, 1415
BsnI	GGCC	9 cut(s)	146, 283, 463, 742, 853, 993, 1121, 1277, 1473
Bso31I	GGTCTC	1 cut(s)	2020
BsoBI	CYCGRG	1 cut(s)	485
Bsp119I	TTCGAA	1 cut(s)	823
Bsp1286I	GDGCHC	2 cut(s)	492, 1714
Bsp143I	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
Bsp19I	CCATGG	1 cut(s)	204
BspANI	GGCC	9 cut(s)	146, 283, 463, 742, 853, 993, 1121, 1277, 1473
BspCNI	CTCAG	3 cut(s)	1579, 1903, 1987
BspFNI	CGCG	2 cut(s)	504, 620
BspHI	TCATGA	2 cut(s)	1521, 1879
BspLI	GGNNCC	5 cut(s)	85, 562, 571, 992, 1134
BspMAI	CTGCAG	3 cut(s)	226, 1086, 1242
BspMI	ACCTGC	1 cut(s)	1591
BspPI	GGATC	3 cut(s)	676, 1026, 1582
BspT104I	TTCGAA	1 cut(s)	823
BspT107I	GGYRCC	1 cut(s)	83
BspTNI	GGTCTC	1 cut(s)	2020
BsrBI	CCGCTC	2 cut(s)	484, 603
BsrDI	GCAATG	1 cut(s)	1509
BsrFI	RCCGGY	1 cut(s)	2171
BsrI	ACTGG	5 cut(s)	23, 847, 881, 1680, 2122
BssAI	RCCGGY	1 cut(s)	2171
BssECI	CCNNGG	6 cut(s)	204, 284, 458, 831, 924, 1008
BssMI	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
BssT1I	CCWWGG	1 cut(s)	204
Bst2UI	CCWGG	2 cut(s)	662, 911
Bst4CI	ACNGT	2 cut(s)	835, 2129
Bst6I	CTCTTC	6 cut(s)	1173, 1281, 1289, 1322, 1370, 1962
BstAPI	GCANNNNNTGC	1 cut(s)	1718
BstBI	TTCGAA	1 cut(s)	823
BstC8I	GCNNGC	9 cut(s)	517, 526, 864, 1092, 1389, 1422, 1626, 1987, 2173
BstDEI	CTNAG	5 cut(s)	1143, 1569, 1587, 1911, 1974
BstDSI	CCRYGG	3 cut(s)	204, 458, 831
BstF5I	GGATG	4 cut(s)	1189, 1366, 1684, 1864
BstFNI	CGCG	2 cut(s)	504, 620
BstHHI	GCGC	1 cut(s)	622
BstKTI	GATC	8 cut(s)	248, 546, 684, 702, 907, 1021, 1577, 1786
BstMAI	GTCTC	4 cut(s)	1802, 1964, 2020, 2074
BstMBI	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
BstMCI	CGRYCG	2 cut(s)	464, 546
BstNI	CCWGG	2 cut(s)	662, 911
BstNSI	RCATGY	2 cut(s)	1094, 2036
BstSCI	CCNGG	5 cut(s)	562, 660, 728, 768, 909
BstSFI	CTRYAG	3 cut(s)	222, 1082, 1238
BstSLI	GKGCMC	1 cut(s)	1714
BstUI	CGCG	2 cut(s)	504, 620
BstV1I	GCAGC	9 cut(s)	197, 212, 236, 239, 540, 1096, 1099, 1919, 2093
BstV2I	GAAGAC	5 cut(s)	40, 658, 765, 1172, 1928
BstX2I	RGATCY	1 cut(s)	245
BstYI	RGATCY	1 cut(s)	245
BstZI	CGGCCG	1 cut(s)	461
Bsu36I	CCTNAGG	2 cut(s)	1143, 1569
BsuRI	GGCC	9 cut(s)	146, 283, 463, 742, 853, 993, 1121, 1277, 1473
BtgI	CCRYGG	3 cut(s)	204, 458, 831
BtgZI	GCGATG	2 cut(s)	559, 729
BtrI	CACGTC	1 cut(s)	1766
BtsCI	GGATG	4 cut(s)	1189, 1366, 1684, 1864
BtsIMutI	CAGTG	4 cut(s)	30, 854, 874, 1673
BveI	ACCTGC	1 cut(s)	1591
Cac8I	GCNNGC	9 cut(s)	517, 526, 864, 1092, 1389, 1422, 1626, 1987, 2173
CciI	TCATGA	2 cut(s)	1521, 1879
CfoI	GCGC	1 cut(s)	622
Cfr10I	RCCGGY	1 cut(s)	2171
Cfr13I	GGNCC	5 cut(s)	20, 281, 560, 991, 1472
CseI	GACGC	1 cut(s)	521
Csp6I	GTAC	3 cut(s)	84, 958, 2125
CviAII	CATG	9 cut(s)	73, 205, 817, 1091, 1199, 1522, 1880, 1885, 2033
CviQI	GTAC	3 cut(s)	84, 958, 2125
DdeI	CTNAG	5 cut(s)	1143, 1569, 1587, 1911, 1974
DpnI	GATC	8 cut(s)	247, 545, 683, 701, 906, 1020, 1576, 1785
DpnII	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
DraI	TTTAAA	1 cut(s)	1620
EaeI	YGGCCR	3 cut(s)	461, 740, 851
EagI	CGGCCG	1 cut(s)	461
Eam1104I	CTCTTC	6 cut(s)	1173, 1281, 1289, 1322, 1370, 1962
EarI	CTCTTC	6 cut(s)	1173, 1281, 1289, 1322, 1370, 1962
EciI	GGCGGA	3 cut(s)	485, 616, 1124
EclXI	CGGCCG	1 cut(s)	461
Eco130I	CCWWGG	1 cut(s)	204
Eco147I	AGGCCT	1 cut(s)	1121
Eco31I	GGTCTC	1 cut(s)	2020
Eco47I	GGWCC	2 cut(s)	20, 560
Eco52I	CGGCCG	1 cut(s)	461
Eco57I	CTGAAG	7 cut(s)	1343, 1679, 1742, 1940, 1983, 2174, 2187
Eco81I	CCTNAGG	2 cut(s)	1143, 1569
Eco88I	CYCGRG	1 cut(s)	485
EcoRI	GAATTC	3 cut(s)	838, 919, 1792
EcoRII	CCWGG	2 cut(s)	660, 909
EcoT14I	CCWWGG	1 cut(s)	204
ErhI	CCWWGG	1 cut(s)	204
FaeI	CATG	9 cut(s)	76, 208, 820, 1094, 1202, 1525, 1883, 1888, 2036
FalI	AAGNNNNNCTT	2 cut(s)	145, 177
FaqI	GGGAC	3 cut(s)	546, 1067, 1415
FatI	CATG	9 cut(s)	72, 204, 816, 1090, 1198, 1521, 1879, 1884, 2032
FauI	CCCGC	3 cut(s)	282, 697, 1935
FblI	GTMKAC	1 cut(s)	585
FokI	GGATG	4 cut(s)	1196, 1373, 1691, 1871
FspBI	CTAG	3 cut(s)	249, 1425, 1845
GlaI	GCGC	1 cut(s)	621
GsuI	CTGGAG	2 cut(s)	932, 1124
HaeIII	GGCC	9 cut(s)	146, 283, 463, 742, 853, 993, 1121, 1277, 1473
HapII	CCGG	4 cut(s)	564, 730, 770, 2172
HgaI	GACGC	1 cut(s)	521
HhaI	GCGC	1 cut(s)	622
Hin1II	CATG	9 cut(s)	76, 208, 820, 1094, 1202, 1525, 1883, 1888, 2036
Hin6I	GCGC	1 cut(s)	620
HinP1I	GCGC	1 cut(s)	620
HincII	GTYRAC	2 cut(s)	586, 1603
HindII	GTYRAC	2 cut(s)	586, 1603
HindIII	AAGCTT	2 cut(s)	159, 517
HpaII	CCGG	4 cut(s)	564, 730, 770, 2172
HphI	GGTGA	6 cut(s)	43, 694, 784, 847, 899, 1603
Hpy166II	GTNNAC	6 cut(s)	10, 133, 586, 960, 1603, 1712
Hpy188III	TCNNGA	9 cut(s)	150, 679, 935, 1022, 1042, 1217, 1522, 1769, 1880
Hpy8I	GTNNAC	6 cut(s)	10, 133, 586, 960, 1603, 1712
Hpy99I	CGWCG	7 cut(s)	362, 451, 515, 587, 728, 1099, 1141
HpyAV	CCTTC	5 cut(s)	104, 1069, 1258, 1438, 1651
HpyCH4III	ACNGT	2 cut(s)	835, 2129
HpyCH4IV	ACGT	3 cut(s)	582, 962, 1765
HpyF3I	CTNAG	5 cut(s)	1143, 1569, 1587, 1911, 1974
HpySE526I	ACGT	3 cut(s)	582, 962, 1765
Hsp92II	CATG	9 cut(s)	76, 208, 820, 1094, 1202, 1525, 1883, 1888, 2036
HspAI	GCGC	1 cut(s)	620
KpnI	GGTACC	1 cut(s)	87
KroI	GCCGGC	1 cut(s)	2171
KroNI	GCCGGC	1 cut(s)	2173
Kzo9I	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
LmnI	GCTCC	7 cut(s)	575, 608, 913, 1066, 1099, 1132, 1318
Lsp1109I	GCAGC	9 cut(s)	197, 212, 236, 239, 540, 1096, 1099, 1919, 2093
LweI	GCATC	2 cut(s)	160, 1708
MaeI	CTAG	3 cut(s)	249, 1425, 1845
MaeII	ACGT	3 cut(s)	582, 962, 1765
MaeIII	GTNAC	3 cut(s)	896, 1761, 1948
MalI	GATC	8 cut(s)	247, 545, 683, 701, 906, 1020, 1576, 1785
MbiI	CCGCTC	2 cut(s)	484, 603
MboI	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
MfeI	CAATTG	2 cut(s)	1070, 1787
MflI	RGATCY	1 cut(s)	245
MhlI	GDGCHC	2 cut(s)	492, 1714
MlsI	TGGCCA	1 cut(s)	742
MluNI	TGGCCA	1 cut(s)	742
MlyI	GAGTC	5 cut(s)	500, 1341, 1628, 1966, 2003
MmeI	TCCRAC	3 cut(s)	534, 1110, 1470
Mox20I	TGGCCA	1 cut(s)	742
MroNI	GCCGGC	1 cut(s)	2171
MscI	TGGCCA	1 cut(s)	742
MseI	TTAA	5 cut(s)	1350, 1482, 1619, 1799, 1866
MslI	CAYNNNNRTG	1 cut(s)	1830
Msp20I	TGGCCA	1 cut(s)	742
MspA1I	CMGCKG	1 cut(s)	1910
MspI	CCGG	4 cut(s)	564, 730, 770, 2172
MspR9I	CCNGG	5 cut(s)	564, 662, 730, 770, 911
MunI	CAATTG	2 cut(s)	1070, 1787
MvaI	CCWGG	2 cut(s)	662, 911
MvnI	CGCG	2 cut(s)	504, 620
NaeI	GCCGGC	1 cut(s)	2173
NciI	CCSGG	3 cut(s)	564, 730, 770
NcoI	CCATGG	1 cut(s)	204
NdeII	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
NgoMIV	GCCGGC	1 cut(s)	2171
NlaIII	CATG	9 cut(s)	76, 208, 820, 1094, 1202, 1525, 1883, 1888, 2036
NlaIV	GGNNCC	5 cut(s)	85, 562, 571, 992, 1134
NmeAIII	GCCGAG	4 cut(s)	265, 1033, 1441, 1449
NmuCI	GTSAC	1 cut(s)	1761
NspI	RCATGY	2 cut(s)	1094, 2036
NspV	TTCGAA	1 cut(s)	823
PaeI	GCATGC	1 cut(s)	1094
PaeR7I	CTCGAG	1 cut(s)	485
PagI	TCATGA	2 cut(s)	1521, 1879
PaqCI	CACCTGC	1 cut(s)	1591
PceI	AGGCCT	1 cut(s)	1121
PciI	ACATGT	1 cut(s)	2032
PcsI	WCGNNNNNNNCGW	2 cut(s)	582, 732
PdiI	GCCGGC	1 cut(s)	2173
PflFI	GACNNNGTC	1 cut(s)	2012
Ple19I	CGATCG	1 cut(s)	546
PleI	GAGTC	5 cut(s)	500, 1340, 1628, 1966, 2003
PpsI	GAGTC	5 cut(s)	500, 1340, 1628, 1966, 2003
PscI	ACATGT	1 cut(s)	2032
Psp6I	CCWGG	2 cut(s)	660, 909
PspGI	CCWGG	2 cut(s)	660, 909
PspN4I	GGNNCC	5 cut(s)	85, 562, 571, 992, 1134
PspPI	GGNCC	5 cut(s)	20, 281, 560, 991, 1472
PspXI	VCTCGAGB	1 cut(s)	485
PstI	CTGCAG	3 cut(s)	226, 1086, 1242
PsuI	RGATCY	1 cut(s)	245
PsyI	GACNNNGTC	1 cut(s)	2012
PvuI	CGATCG	1 cut(s)	546
PvuII	CAGCTG	1 cut(s)	1910
RsaI	GTAC	3 cut(s)	85, 959, 2126
RsaNI	GTAC	3 cut(s)	84, 958, 2125
RseI	CAYNNNNRTG	1 cut(s)	1830
SalI	GTCGAC	1 cut(s)	584
SaqAI	TTAA	5 cut(s)	1350, 1482, 1619, 1799, 1866
Sau3AI	GATC	8 cut(s)	245, 543, 681, 699, 904, 1018, 1574, 1783
Sau96I	GGNCC	5 cut(s)	20, 281, 560, 991, 1472
SchI	GAGTC	5 cut(s)	500, 1341, 1628, 1966, 2003
ScrFI	CCNGG	5 cut(s)	564, 662, 730, 770, 911
SduI	GDGCHC	2 cut(s)	492, 1714
SfaNI	GCATC	2 cut(s)	160, 1708
SfcI	CTRYAG	3 cut(s)	222, 1082, 1238
Sfr274I	CTCGAG	1 cut(s)	485
SfuI	TTCGAA	1 cut(s)	823
SinI	GGWCC	2 cut(s)	20, 560
SlaI	CTCGAG	1 cut(s)	485
SmiMI	CAYNNNNRTG	1 cut(s)	1830
SmlI	CTYRAG	2 cut(s)	485, 1123
SmoI	CTYRAG	2 cut(s)	485, 1123
SphI	GCATGC	1 cut(s)	1094
SseBI	AGGCCT	1 cut(s)	1121
SspI	AATATT	1 cut(s)	1891
SspMI	CTAG	3 cut(s)	249, 1425, 1845
StuI	AGGCCT	1 cut(s)	1121
StyD4I	CCNGG	5 cut(s)	562, 660, 728, 768, 909
StyI	CCWWGG	1 cut(s)	204
TaaI	ACNGT	2 cut(s)	835, 2129
TaiI	ACGT	3 cut(s)	585, 965, 1768
TaqII	GACCGA	1 cut(s)	2002
TatI	WGTACW	2 cut(s)	957, 2124
TauI	GCSGC	7 cut(s)	212, 466, 469, 484, 534, 558, 570
Tru1I	TTAA	5 cut(s)	1350, 1482, 1619, 1799, 1866
Tru9I	TTAA	5 cut(s)	1350, 1482, 1619, 1799, 1866
TscAI	CASTG	4 cut(s)	30, 854, 881, 1680
TseFI	GTSAC	1 cut(s)	1761
TseI	GCWGC	9 cut(s)	185, 200, 224, 227, 528, 1084, 1087, 1907, 2081
Tsp45I	GTSAC	1 cut(s)	1761
TspDTI	ATGAA	8 cut(s)	467, 1017, 1388, 1785, 1788, 1875, 1901, 2072
TspGWI	ACGGA	3 cut(s)	646, 1112, 2124
TspRI	CASTG	4 cut(s)	30, 854, 881, 1680
Tth111I	GACNNNGTC	1 cut(s)	2012
VneI	GTGCAC	1 cut(s)	1710
VpaK11BI	GGWCC	2 cut(s)	20, 560
XapI	RAATTY	6 cut(s)	377, 674, 716, 838, 919, 1792
XceI	RCATGY	2 cut(s)	1094, 2036
XhoI	CTCGAG	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	585
XspI	CTAG	3 cut(s)	249, 1425, 1845

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.