Rmu_sc0001353.1_g000065

GMC oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001353.1
OG0003277
Physical Location & Seq
Reverse (-)
283465 .. 292413
8949 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4002 bp
atgtatgtacaaggggcgaccacggctgaggtattgcggtggcttgtttctttccggcggtggggcatggcgtcatcgaatatgcgggatggattgtggcggaggcgggtagatcgcggcagaggggatccccgtagggatctgtttctgtcatgcgttgggatctggttgtggttgtcagcaggatgtagatcctgtttgcaacttggcaagctggtgcggcggaagcggcgagacagtggggggatgaagatggtgtttgtcggcggcgggaatgggtgtctgcagtgcttgattgctagtgggggaagtgggttggtttcctactcttttgggctacgaattggtctaggtgttatgccatgtaaatggtgtcattcccgaggacgaggacgatgttgttcaactccggtttacttttgttatcgatttgctgataagcgatcctttgcacgtggtctagcaccttcggacaaggtgttgaagaggacgctatcttcttcgcggttgattacaaggttttactggaattttcaggtttatatgttcaaagtagccttggaaataggcgtttggtggttagagcttgggccctttggcctgatggtctctgtaaccgcggtttcttggggttttggttcatgtcgcccccaatttgttgtggggtctggttatggaggttctgttgctgcttgtcggctggctatggcaggcgtaagggtgtgtctacttgaaaagggccggaaatgggaagcgcaggacttcccaactgacagcatcaaaatcttatcggctgtgaggatggagaaccagaacctagcgcaggacttcccaactgacagcttcaaaatcttatcggctgtgaggatggagaaccagaaccttggtgttagctatggaccaaaagatgctttatttcaggtgtacgagcaaaatgattctctagcagcagtggcttgtgggcttggtggaggttcactagtgaatgctggagttatgatgccagcatcagttcgtgctaggcggcatccaaaatggccgaaggaatgggaaaggaattggggtagttgtgaagcttctgctgcagacatgctgagaatacaaagcattcccgtcaagtttccttccgcgaaaattttggaagaagctgctgatggagtaacttttgacacttcaataaagcttagtgtgaattttgacattgaagaaccaacatcaaatggaacgaagcgtccacagatgggaaaaaatggcaggagatggctcgtttacttgaatgagattgactatgtgacctgtgattttgtgatcctatccgctggagtttttggcacaactgagatactcttccaatcacaaatgagaggactgaaactttcagaagcacttggatctggattcagctgtaatgggaacactgtggcttatcttgctggaacgccagcaccaatcaatggttatggattagacagaaagcgggtgttcacaactcctttccaagaaaggccagggccatcaatttcttcatctttcacttcttcactcggttttacaatccagagtgctgtacttccaatagcttatccatatctgctatttaaaggaatcacaacatatggatggcctgctgggtactggttcctccatggaattatagacaagataagacacattataggttccaaagcaagccaagcaatggttcttattgcagtgggacatgatgaaagtgatggtaagatcatattagagaagggcaacaaaaaaatctgctttactcctcctcaggatccccttctcccacgaaagattaaagcttttcagaagctcactaagaaactaggaggacttctcttcatgtcaaaataccgaagcacagcagttcatcttttaggagggtgcaatgtgtcttcagatccttcaggtggtgtttgcaaccccaatggacaggtttttgaaccagactcatcctcaacagtgcatcccggcctctacgtgtgtgatgcttctttgatcccatgttctgttgggataaatccatctcttaccatcacaactgcagctgagcacataagtaagaacattgtgcaggaagctctgaagtacaagagcagcaatggtcttgaatgtgtggtgaaaactgctgaccaaggtcaacaatccttcatcgagaagaattttattaaccgtcatggagaaatggtcatggttaaagaaaccatgaaaggttatgttgggggtatgccatgcactgcttatctaaaaatgaggatgaattctcaggaccagactttctctgatgtaaagttgggtaccggaaaatcccatccccttcttagaggtaaagttggaggacatgtagaaattagagcctttgagaaggatgatttacatatcatagatgggaacgtaaatttgtgtgtagttgatgacagaactccatacacacagtatatgcagtatgattttcttcttgcagcttctactggttcaagatatattctcaagggaagaaagataatgaatccatatttctttccattatatgcttggagagagatgacaacactgcatgttacattcgaaaaattttttgaggaagactcaaaggatgagaaggtggttctcaaaggggagcttcatatttcgatgacagagcttcttaagagcatcataaggcttcaaggaaacaatagaggaaggtttatgtgcctcctctcagggtctttcttaagaacttatttcttgccaataccacgtgggaatcagggtgatttagttctgtcagaagatagatcttatccaagtagcactctccatgaaataaaagcagaagacggattcactataggttgcagacaatggaagtcgaaacttcaaggtgaagaaaaactgaatccggttctccttcttaatgcatatgctattgagagtttctggctgccaactgagccaaatgatttggtcagaactttaattgaagaagggcatgaaacatggttattgaattctagattgcaccctctgaatccttctaatgattttacaattgaagatgttggaaaatttgatattcctgctgcaattaataagatccttgaaatccatggaccatgcacaaaggtgcatgtagttgcacactgtgttggaggctcagccatacacatagctatcatgggaggtcatgtctctgcaacccatatagcttctctgtcttgcaccaactcatcaatgttcttcaagcttaatgctatgtccacattcaaaatgtggcttcctctgataccgttgtcaatgttcatacttggaaacgacaagacacttcctcttttggaaacatcaaataccagctcccggcatcgcctcctgaaactgatagctagcttcatacctcggactgagagatgcacctgctttgactgtgaagttttctctggcgtatttggaaatgctttctggcatgaaaatatcaccccaaccttgcaccagtggttgaccaagaaaaacacgacaaggcttcctatggcagcatttccccatctcagaaaaatgtccaactctggttttattgtagacagcaagggttgcaactcatatttgatccatccagaaagaatggcactcccaacgctctatatatccggtgggcgatctctccttgtgactcctcaaacttctttcctagctcataagtacatgaagttgcaccagccagggtttagacatgaaagggtagttgtagagggttttgggcattcagatttattgattggagaagagtcccacaagaaggtgtttcctcacattttatctcatataagattagctgaacaaggggagattcatgccaaaggaaagaagtacagtaaagaagccttggatcgggaagatgatcaatattatgaaggcaactttggaatatttggaacttggttctctccgtttgtggttttcatgttgctgtttatctcactttcttggttggtggcagcagcggcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

1333

Amino Acids

148.47

Weight (kDa)

9.21

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_C PF05199 620 - 688 6.2e-10 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3419
Acc36I ACCTGC 1 cut(s) 3419
Acc65I GGTACC 1 cut(s) 2312
AccB1I GGYRCC 1 cut(s) 2312
AccB7I CCANNNNNTGG 2 cut(s) 1454, 1699
AccI GTMKAC 2 cut(s) 727, 3573
AccII CGCG 4 cut(s) 117, 505, 620, 1130
AcoI YGGCCR 1 cut(s) 1037
AcsI RAATTY 9 cut(s) 529, 1134, 1192, 2176, 2275, 2413, 2588, 3007, 3065
AcuI CTGAAG 3 cut(s) 1896, 1905, 2120
AcvI CACGTG 2 cut(s) 455, 2759
AcyI GRCGYC 1 cut(s) 71
AdeI CACNNNGTG 1 cut(s) 3143
AfaI GTAC 8 cut(s) 9, 926, 1569, 1634, 2105, 2314, 3695, 3863
AflII CTTAAG 2 cut(s) 2663, 2731
AflIII ACRYGT 2 cut(s) 1995, 2356
AhlI ACTAGT 1 cut(s) 979
AjnI CCWGG 2 cut(s) 1507, 3712
AjuI GAANNNNNNNTTGG 4 cut(s) 1686, 1718, 3897, 3929
AleI CACNNNNGTG 1 cut(s) 3122
AloI GAACNNNNNNTCC 2 cut(s) 1216, 1248
Alw21I GWGCWC 1 cut(s) 2070
Alw26I GTCTC 3 cut(s) 228, 613, 3193
Ama87I CYCGRG 1 cut(s) 381
AoxI GGCC 8 cut(s) 590, 598, 739, 1037, 1505, 1511, 1622, 1987
ApaI GGGCCC 1 cut(s) 594
ApoI RAATTY 9 cut(s) 529, 1134, 1192, 2176, 2275, 2413, 2588, 3007, 3065
AseI ATTAAT 1 cut(s) 3087
Asp718I GGTACC 1 cut(s) 2312
AspLEI GCGC 2 cut(s) 757, 823
AspS9I GGNCC 7 cut(s) 590, 591, 739, 899, 1511, 2284, 3110
AsuC2I CCSGG 2 cut(s) 1986, 3355
AsuHPI GGTGA 4 cut(s) 2146, 2783, 2894, 3463
AsuII TTCGAA 1 cut(s) 2583
AsuNHI GCTAGC 1 cut(s) 3380
AvaI CYCGRG 1 cut(s) 381
AvaII GGWCC 3 cut(s) 899, 2284, 3110
AxyI CCTNAGG 1 cut(s) 1785
BaeGI GKGCMC 1 cut(s) 594
BaeI ACNNNNGTAYC 2 cut(s) 3275, 3308
BamHI GGATCC 2 cut(s) 127, 1789
BanI GGYRCC 1 cut(s) 2312
BanII GRGCYC 1 cut(s) 594
BbrPI CACGTG 2 cut(s) 455, 2759
BbsI GAAGAC 3 cut(s) 1902, 2607, 2841
Bbv12I GWGCWC 1 cut(s) 2070
BbvCI CCTCAGC 1 cut(s) 27
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 2 cut(s) 1509, 3714
BclI TGATCA 1 cut(s) 3892
BcnI CCSGG 2 cut(s) 1986, 3355
BcoDI GTCTC 3 cut(s) 228, 613, 3193
BcuI ACTAGT 1 cut(s) 979
BfmI CTRYAG 4 cut(s) 284, 1083, 2058, 2847
BfrI CTTAAG 2 cut(s) 2663, 2731
BfuAI ACCTGC 1 cut(s) 3419
BglII AGATCT 1 cut(s) 2795
BlpI GCTNAGC 2 cut(s) 2064, 3154
Bme1390I CCNGG 4 cut(s) 1509, 1986, 3355, 3714
Bme18I GGWCC 3 cut(s) 899, 2284, 3110
BmeT110I CYCGRG 1 cut(s) 381
BmgT120I GGNCC 7 cut(s) 590, 591, 739, 899, 1511, 2284, 3110
BmiI GGNNCC 6 cut(s) 129, 592, 1640, 1681, 1791, 2314
BmrFI CCNGG 4 cut(s) 1509, 1986, 3355, 3714
BmtI GCTAGC 1 cut(s) 3384
BoxI GACNNNNGTC 1 cut(s) 2151
BpiI GAAGAC 3 cut(s) 1902, 2607, 2841
BplI GAGNNNNNCTC 4 cut(s) 1836, 1868, 2588, 2620
BpmI CTGGAG 2 cut(s) 1011, 1341
Bpu10I CCTNAGC 1 cut(s) 27
Bpu1102I GCTNAGC 2 cut(s) 2064, 3154
Bpu14I TTCGAA 1 cut(s) 2583
BpuEI CTTGAG 1 cut(s) 2489
BpuMI CCSGG 2 cut(s) 1986, 3355
Bsa29I ATCGAT 1 cut(s) 427
BsaAI YACGTR 3 cut(s) 455, 1996, 2759
BsaBI GATNNNNATC 1 cut(s) 190
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 613
BsaWI WCCGGW 4 cut(s) 409, 2315, 2899, 3641
BsaXI ACNNNNNCTCC 8 cut(s) 669, 699, 2187, 2217, 2343, 2373, 3171, 3201
Bse1I ACTGG 4 cut(s) 530, 1640, 2491, 3487
Bse21I CCTNAGG 1 cut(s) 1785
Bse3DI GCAATG 3 cut(s) 1704, 1909, 2122
Bse8I GATNNNNATC 1 cut(s) 190
BseBI CCWGG 2 cut(s) 1509, 3714
BseCI ATCGAT 1 cut(s) 427
BseJI GATNNNNATC 1 cut(s) 190
BseMI GCAATG 3 cut(s) 1704, 1909, 2122
BseNI ACTGG 4 cut(s) 530, 1640, 2491, 3487
BseRI GAGGAG 4 cut(s) 1770, 1773, 2705, 3657
BseSI GKGCMC 1 cut(s) 594
BseYI CCCAGC 1 cut(s) 1628
BsgI GTGCAG 1 cut(s) 2108
Bsh1236I CGCG 4 cut(s) 117, 505, 620, 1130
BshFI GGCC 8 cut(s) 592, 600, 741, 1039, 1507, 1513, 1624, 1989
BshNI GGYRCC 1 cut(s) 2312
BshVI ATCGAT 1 cut(s) 427
BsiHKAI GWGCWC 1 cut(s) 2070
BsiHKCI CYCGRG 1 cut(s) 381
BsiSI CCGG 8 cut(s) 55, 410, 742, 1986, 2316, 2900, 3355, 3642
BslFI GGGAC 2 cut(s) 1731, 3766
BsmAI GTCTC 3 cut(s) 228, 613, 3193
BsmFI GGGAC 2 cut(s) 1731, 3766
BsmI GAATGC 3 cut(s) 991, 1107, 3754
BsnI GGCC 8 cut(s) 592, 600, 741, 1039, 1507, 1513, 1624, 1989
Bso31I GGTCTC 1 cut(s) 613
BsoBI CYCGRG 1 cut(s) 381
Bsp119I TTCGAA 1 cut(s) 2583
Bsp120I GGGCCC 1 cut(s) 590
Bsp1286I GDGCHC 2 cut(s) 594, 2070
Bsp1407I TGTACA 1 cut(s) 7
Bsp1720I GCTNAGC 2 cut(s) 2064, 3154
Bsp19I CCATGG 2 cut(s) 1645, 3106
BspANI GGCC 8 cut(s) 592, 600, 741, 1039, 1507, 1513, 1624, 1989
BspDI ATCGAT 1 cut(s) 427
BspFNI CGCG 4 cut(s) 117, 505, 620, 1130
BspLI GGNNCC 6 cut(s) 129, 592, 1640, 1681, 1791, 2314
BspMAI CTGCAG 3 cut(s) 288, 1087, 2062
BspMI ACCTGC 1 cut(s) 3419
BspOI GCTAGC 1 cut(s) 3384
BspT104I TTCGAA 1 cut(s) 2583
BspT107I GGYRCC 1 cut(s) 2312
BspTI CTTAAG 2 cut(s) 2663, 2731
BspTNI GGTCTC 1 cut(s) 613
BsrDI GCAATG 3 cut(s) 1704, 1909, 2122
BsrGI TGTACA 1 cut(s) 7
BsrI ACTGG 4 cut(s) 530, 1640, 2491, 3487
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 6 cut(s) 558, 883, 1645, 2149, 3106, 3876
Bst2UI CCWGG 2 cut(s) 1509, 3714
Bst4CI ACNGT 9 cut(s) 239, 1420, 1978, 2189, 2451, 3143, 3288, 3422, 3866
Bst6I CTCTTC 4 cut(s) 479, 1352, 1859, 3771
BstACI GRCGYC 1 cut(s) 71
BstAFI CTTAAG 2 cut(s) 2663, 2731
BstAPI GCANNNNNTGC 1 cut(s) 3585
BstAUI TGTACA 1 cut(s) 7
BstBAI YACGTR 3 cut(s) 455, 1996, 2759
BstBI TTCGAA 1 cut(s) 2583
BstC8I GCNNGC 8 cut(s) 212, 702, 712, 1005, 1443, 1626, 1690, 3382
BstDSI CCRYGG 4 cut(s) 21, 618, 1645, 3106
BstENI CCTNNNNNAGG 1 cut(s) 821
BstFNI CGCG 4 cut(s) 117, 505, 620, 1130
BstHHI GCGC 2 cut(s) 757, 823
BstMAI GTCTC 3 cut(s) 228, 613, 3193
BstNI CCWGG 2 cut(s) 1509, 3714
BstNSI RCATGY 4 cut(s) 1093, 2360, 2576, 3131
BstPAI GACNNNNGTC 1 cut(s) 2151
BstSCI CCNGG 4 cut(s) 1507, 1984, 3353, 3712
BstSFI CTRYAG 4 cut(s) 284, 1083, 2058, 2847
BstSLI GKGCMC 1 cut(s) 594
BstUI CGCG 4 cut(s) 117, 505, 620, 1130
BstV2I GAAGAC 3 cut(s) 1902, 2607, 2841
BstX2I RGATCY 9 cut(s) 127, 139, 162, 191, 1391, 1789, 1915, 2795, 3093
BstXI CCANNNNNNTGG 2 cut(s) 369, 884
BstYI RGATCY 9 cut(s) 127, 139, 162, 191, 1391, 1789, 1915, 2795, 3093
Bsu15I ATCGAT 1 cut(s) 427
Bsu36I CCTNAGG 1 cut(s) 1785
BsuRI GGCC 8 cut(s) 592, 600, 741, 1039, 1507, 1513, 1624, 1989
BsuTUI ATCGAT 1 cut(s) 427
BtgI CCRYGG 4 cut(s) 21, 618, 1645, 3106
BtgZI GCGATG 1 cut(s) 3344
BtsI GCAGTG 5 cut(s) 293, 957, 1719, 2250, 2567
BveI ACCTGC 1 cut(s) 3419
Cac8I GCNNGC 8 cut(s) 212, 702, 712, 1005, 1443, 1626, 1690, 3382
CfoI GCGC 2 cut(s) 757, 823
Cfr13I GGNCC 7 cut(s) 590, 591, 739, 899, 1511, 2284, 3110
Cfr42I CCGCGG 1 cut(s) 621
ClaI ATCGAT 1 cut(s) 427
CseI GACGC 3 cut(s) 60, 499, 1220
Csp6I GTAC 8 cut(s) 8, 925, 1568, 1633, 2104, 2313, 3694, 3862
CviQI GTAC 8 cut(s) 8, 925, 1568, 1633, 2104, 2313, 3694, 3862
DraI TTTAAA 1 cut(s) 1600
DraIII CACNNNGTG 1 cut(s) 3143
EaeI YGGCCR 1 cut(s) 1037
Eam1104I CTCTTC 4 cut(s) 479, 1352, 1859, 3771
EarI CTCTTC 4 cut(s) 479, 1352, 1859, 3771
EciI GGCGGA 2 cut(s) 115, 238
Eco130I CCWWGG 6 cut(s) 558, 883, 1645, 2149, 3106, 3876
Eco24I GRGCYC 1 cut(s) 594
Eco31I GGTCTC 1 cut(s) 613
Eco47I GGWCC 3 cut(s) 899, 2284, 3110
Eco57I CTGAAG 3 cut(s) 1896, 1905, 2120
Eco72I CACGTG 2 cut(s) 455, 2759
Eco81I CCTNAGG 1 cut(s) 1785
Eco88I CYCGRG 1 cut(s) 381
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoO109I RGGNCCY 1 cut(s) 591
EcoRI GAATTC 2 cut(s) 2275, 3007
EcoRII CCWGG 2 cut(s) 1507, 3712
EcoT14I CCWWGG 6 cut(s) 558, 883, 1645, 2149, 3106, 3876
EcoT22I ATGCAT 1 cut(s) 2920
EcoT38I GRGCYC 1 cut(s) 594
ErhI CCWWGG 6 cut(s) 558, 883, 1645, 2149, 3106, 3876
FalI AAGNNNNNCTT 4 cut(s) 431, 463, 2622, 2654
FaqI GGGAC 2 cut(s) 1731, 3766
FauI CCCGC 4 cut(s) 78, 99, 263, 1470
FauNDI CATATG 2 cut(s) 1615, 2920
FbaI TGATCA 1 cut(s) 3892
FblI GTMKAC 2 cut(s) 727, 3573
FriOI GRGCYC 1 cut(s) 594
GlaI GCGC 2 cut(s) 756, 822
GsaI CCCAGC 1 cut(s) 1632
GsuI CTGGAG 2 cut(s) 1011, 1341
HaeIII GGCC 8 cut(s) 592, 600, 741, 1039, 1507, 1513, 1624, 1989
HapII CCGG 8 cut(s) 55, 410, 742, 1986, 2316, 2900, 3355, 3642
HgaI GACGC 3 cut(s) 60, 499, 1220
HhaI GCGC 2 cut(s) 757, 823
Hin1I GRCGYC 1 cut(s) 71
Hin6I GCGC 2 cut(s) 755, 821
HinP1I GCGC 2 cut(s) 755, 821
HincII GTYRAC 2 cut(s) 2156, 3495
HindII GTYRAC 2 cut(s) 2156, 3495
HindIII AAGCTT 4 cut(s) 1074, 1181, 1815, 3242
HpaII CCGG 8 cut(s) 55, 410, 742, 1986, 2316, 2900, 3355, 3642
HphI GGTGA 4 cut(s) 2146, 2783, 2894, 3463
HpyCH4III ACNGT 9 cut(s) 239, 1420, 1978, 2189, 2451, 3143, 3288, 3422, 3866
HpyCH4IV ACGT 4 cut(s) 454, 1995, 2409, 2758
HpySE526I ACGT 4 cut(s) 454, 1995, 2409, 2758
Hsp92I GRCGYC 1 cut(s) 71
HspAI GCGC 2 cut(s) 755, 821
KpnI GGTACC 1 cut(s) 2316
Ksp22I TGATCA 1 cut(s) 3892
KspI CCGCGG 1 cut(s) 621
LmnI GCTCC 2 cut(s) 2635, 3356
MaeII ACGT 4 cut(s) 454, 1995, 2409, 2758
MaeIII GTNAC 5 cut(s) 613, 1159, 1291, 2575, 3661
MfeI CAATTG 1 cut(s) 3048
MflI RGATCY 9 cut(s) 127, 139, 162, 191, 1391, 1789, 1915, 2795, 3093
MhlI GDGCHC 2 cut(s) 594, 2070
MlyI GAGTC 4 cut(s) 1958, 2597, 3658, 3788
MmeI TCCRAC 4 cut(s) 2329, 3040, 3127, 3579
Mph1103I ATGCAT 1 cut(s) 2920
MslI CAYNNNNRTG 3 cut(s) 367, 1618, 3122
MspA1I CMGCKG 5 cut(s) 620, 1319, 1404, 2063, 3995
MspCI CTTAAG 2 cut(s) 2663, 2731
MspI CCGG 8 cut(s) 55, 410, 742, 1986, 2316, 2900, 3355, 3642
MspR9I CCNGG 4 cut(s) 1509, 1986, 3355, 3714
MunI CAATTG 1 cut(s) 3048
Mva1269I GAATGC 3 cut(s) 991, 1107, 3754
MvaI CCWGG 2 cut(s) 1509, 3714
MvnI CGCG 4 cut(s) 117, 505, 620, 1130
NciI CCSGG 2 cut(s) 1986, 3355
NcoI CCATGG 2 cut(s) 1645, 3106
NdeI CATATG 2 cut(s) 1615, 2920
NheI GCTAGC 1 cut(s) 3380
NlaIV GGNNCC 6 cut(s) 129, 592, 1640, 1681, 1791, 2314
NmuCI GTSAC 2 cut(s) 1291, 3661
NsiI ATGCAT 1 cut(s) 2920
NspI RCATGY 4 cut(s) 1093, 2360, 2576, 3131
NspV TTCGAA 1 cut(s) 2583
OliI CACNNNNGTG 1 cut(s) 3122
PaqCI CACCTGC 1 cut(s) 3419
PciI ACATGT 1 cut(s) 2356
PctI GAATGC 3 cut(s) 991, 1107, 3754
PfeI GAWTC 9 cut(s) 938, 1398, 1605, 2524, 2764, 2841, 2896, 3028, 3841
PflMI CCANNNNNTGG 2 cut(s) 1454, 1699
PleI GAGTC 4 cut(s) 1958, 2597, 3658, 3787
PmaCI CACGTG 2 cut(s) 455, 2759
PmlI CACGTG 2 cut(s) 455, 2759
PpsI GAGTC 4 cut(s) 1958, 2597, 3658, 3787
Ppu21I YACGTR 3 cut(s) 455, 1996, 2759
PscI ACATGT 1 cut(s) 2356
PshAI GACNNNNGTC 1 cut(s) 2151
PshBI ATTAAT 1 cut(s) 3087
Psp6I CCWGG 2 cut(s) 1507, 3712
PspCI CACGTG 2 cut(s) 455, 2759
PspFI CCCAGC 1 cut(s) 1628
PspGI CCWGG 2 cut(s) 1507, 3712
PspN4I GGNNCC 6 cut(s) 129, 592, 1640, 1681, 1791, 2314
PspOMI GGGCCC 1 cut(s) 590
PspPI GGNCC 7 cut(s) 590, 591, 739, 899, 1511, 2284, 3110
PstI CTGCAG 3 cut(s) 288, 1087, 2062
PsuI RGATCY 9 cut(s) 127, 139, 162, 191, 1391, 1789, 1915, 2795, 3093
PvuII CAGCTG 2 cut(s) 1404, 2063
RsaI GTAC 8 cut(s) 9, 926, 1569, 1634, 2105, 2314, 3695, 3863
RsaNI GTAC 8 cut(s) 8, 925, 1568, 1633, 2104, 2313, 3694, 3862
RseI CAYNNNNRTG 3 cut(s) 367, 1618, 3122
SacII CCGCGG 1 cut(s) 621
Sau96I GGNCC 7 cut(s) 590, 591, 739, 899, 1511, 2284, 3110
SchI GAGTC 4 cut(s) 1958, 2597, 3658, 3788
ScrFI CCNGG 4 cut(s) 1509, 1986, 3355, 3714
SduI GDGCHC 2 cut(s) 594, 2070
SfcI CTRYAG 4 cut(s) 284, 1083, 2058, 2847
Sfr303I CCGCGG 1 cut(s) 621
SfuI TTCGAA 1 cut(s) 2583
SgrBI CCGCGG 1 cut(s) 621
SinI GGWCC 3 cut(s) 899, 2284, 3110
SmiMI CAYNNNNRTG 3 cut(s) 367, 1618, 3122
SmlI CTYRAG 3 cut(s) 2504, 2663, 2731
SmoI CTYRAG 3 cut(s) 2504, 2663, 2731
SpeI ACTAGT 1 cut(s) 979
SspI AATATT 2 cut(s) 3899, 3921
StyD4I CCNGG 4 cut(s) 1507, 1984, 3353, 3712
StyI CCWWGG 6 cut(s) 558, 883, 1645, 2149, 3106, 3876
TaaI ACNGT 9 cut(s) 239, 1420, 1978, 2189, 2451, 3143, 3288, 3422, 3866
TaiI ACGT 4 cut(s) 457, 1998, 2412, 2761
TaqI TCGA 6 cut(s) 77, 427, 2169, 2583, 2648, 2870
TatI WGTACW 5 cut(s) 7, 1567, 2103, 3693, 3861
TauI GCSGC 6 cut(s) 120, 223, 232, 270, 1027, 3998
TfiI GAWTC 9 cut(s) 938, 1398, 1605, 2524, 2764, 2841, 2896, 3028, 3841
TseFI GTSAC 2 cut(s) 1291, 3661
Tsp45I GTSAC 2 cut(s) 1291, 3661
TspGWI ACGGA 2 cut(s) 2853, 3930
Van91I CCANNNNNTGG 2 cut(s) 1454, 1699
Vha464I CTTAAG 2 cut(s) 2663, 2731
VpaK11BI GGWCC 3 cut(s) 899, 2284, 3110
VspI ATTAAT 1 cut(s) 3087
XagI CCTNNNNNAGG 1 cut(s) 821
XapI RAATTY 9 cut(s) 529, 1134, 1192, 2176, 2275, 2413, 2588, 3007, 3065
XbaI TCTAGA 1 cut(s) 3011
XceI RCATGY 4 cut(s) 1093, 2360, 2576, 3131
XcmI CCANNNNNNNNNTGG 1 cut(s) 2547
XmiI GTMKAC 2 cut(s) 727, 3573
Zsp2I ATGCAT 1 cut(s) 2920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.