Rmu_sc0001419.1_g000004

CS domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001419.1
Physical Location & Seq
Reverse (-)
21206 .. 22058
853 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001419.1_g000004.1.cds

Sequence Viewer

Length: 384 bp
atgttttactgtcttcacggcatcagaagtgaaagttatggtcttggagaattattgtgcatacccatttatcccaatcaactttcaagaacacaggagagattgataaaacaagaaggaaaacctcctgtgttcttgaaagttgattgggataaatgggtagatgaggatgaggaggaaggccaaggacttggaaatgacatggactttggcgacatggatttctctaagctgaatatgggtggtgggggcgatggtcttgatgaattcgatgatagcagtgacactgaagacgagaccgctgaagcagcaccatctgcctctgctgaatctgataccaagcctactgcaagtatggagcatgaagcaaaaccttcagtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.0

Weight (kDa)

4.08

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 300
AcsI RAATTY 1 cut(s) 266
AcuI CTGAAG 3 cut(s) 309, 324, 360
AgsI TTSAA 2 cut(s) 87, 139
AluBI AGCT 1 cut(s) 232
AluI AGCT 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 290
AoxI GGCC 1 cut(s) 181
ApeKI GCWGC 1 cut(s) 308
ApoI RAATTY 1 cut(s) 266
ArsI GACNNNNNNTTYG 2 cut(s) 191, 223
BbsI GAAGAC 2 cut(s) 5, 297
BbvI GCAGC 1 cut(s) 320
BccI CCATC 2 cut(s) 248, 322
BceAI ACGGC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 290
BisI GCNGC 1 cut(s) 309
BlsI GCNGC 1 cut(s) 310
BmsI GCATC 1 cut(s) 30
BpiI GAAGAC 2 cut(s) 5, 297
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 1 cut(s) 184
BseDI CCNNGG 1 cut(s) 184
BseGI GGATG 1 cut(s) 175
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 1 cut(s) 320
BshFI GGCC 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 290
BsnI GGCC 1 cut(s) 183
Bso31I GGTCTC 1 cut(s) 290
BspACI CCGC 1 cut(s) 300
BspANI GGCC 1 cut(s) 183
BspTNI GGTCTC 1 cut(s) 290
BssECI CCNNGG 1 cut(s) 184
BssT1I CCWWGG 1 cut(s) 184
Bst4CI ACNGT 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 317
BstDEI CTNAG 1 cut(s) 228
BstF5I GGATG 1 cut(s) 175
BstMAI GTCTC 1 cut(s) 290
BstMWI GCNNNNNNNGC 2 cut(s) 308, 317
BstV1I GCAGC 1 cut(s) 320
BstV2I GAAGAC 2 cut(s) 5, 297
BstXI CCANNNNNNTGG 1 cut(s) 191
BsuRI GGCC 1 cut(s) 183
BtgZI GCGATG 1 cut(s) 267
BtsCI GGATG 1 cut(s) 175
BtsI GCAGTG 1 cut(s) 286
BtsIMutI CAGTG 2 cut(s) 285, 286
CviAII CATG 3 cut(s) 202, 217, 362
CviJI RGCY 3 cut(s) 183, 232, 343
CviKI_1 RGCY 3 cut(s) 183, 232, 343
DdeI CTNAG 1 cut(s) 228
Eco130I CCWWGG 1 cut(s) 184
Eco31I GGTCTC 1 cut(s) 290
Eco57I CTGAAG 3 cut(s) 309, 324, 360
EcoRI GAATTC 1 cut(s) 266
EcoT14I CCWWGG 1 cut(s) 184
ErhI CCWWGG 1 cut(s) 184
FaeI CATG 3 cut(s) 205, 220, 365
FaiI YATR 7 cut(s) 39, 62, 203, 218, 239, 356, 363
FatI CATG 3 cut(s) 201, 216, 361
Fnu4HI GCNGC 1 cut(s) 309
FokI GGATG 1 cut(s) 182
Fsp4HI GCNGC 1 cut(s) 309
GluI GCNGC 1 cut(s) 309
HaeIII GGCC 1 cut(s) 183
Hin1II CATG 3 cut(s) 205, 220, 365
HinfI GANTC 1 cut(s) 329
Hpy188I TCNGA 3 cut(s) 26, 334, 383
Hpy188III TCNNGA 3 cut(s) 87, 136, 260
HpyAV CCTTC 3 cut(s) 110, 173, 384
HpyCH4III ACNGT 1 cut(s) 11
HpyCH4V TGCA 2 cut(s) 60, 350
HpyF10VI GCNNNNNNNGC 2 cut(s) 308, 317
HpyF3I CTNAG 1 cut(s) 228
Hsp92II CATG 3 cut(s) 205, 220, 365
LmnI GCTCC 1 cut(s) 358
LpnPI CCDG 2 cut(s) 80, 141
Lsp1109I GCAGC 1 cut(s) 320
LweI GCATC 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 281
MboII GAAGA 2 cut(s) 5, 302
MluCI AATT 2 cut(s) 50, 266
MnlI CCTC 5 cut(s) 135, 160, 166, 169, 331
MspA1I CMGCKG 1 cut(s) 302
MwoI GCNNNNNNNGC 2 cut(s) 308, 317
NlaIII CATG 3 cut(s) 205, 220, 365
NmuCI GTSAC 1 cut(s) 281
PfeI GAWTC 1 cut(s) 329
PkrI GCNGC 1 cut(s) 310
SatI GCNGC 1 cut(s) 309
SetI ASST 3 cut(s) 127, 234, 376
SfaNI GCATC 1 cut(s) 30
Sse9I AATT 2 cut(s) 50, 266
SsiI CCGC 1 cut(s) 300
StyI CCWWGG 1 cut(s) 184
TaaI ACNGT 1 cut(s) 11
TaqI TCGA 1 cut(s) 270
TasI AATT 2 cut(s) 50, 266
TfiI GAWTC 1 cut(s) 329
TscAI CASTG 2 cut(s) 286, 292
TseFI GTSAC 1 cut(s) 281
TseI GCWGC 1 cut(s) 308
Tsp45I GTSAC 1 cut(s) 281
TspDTI ATGAA 2 cut(s) 279, 378
TspRI CASTG 2 cut(s) 286, 292
XapI RAATTY 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.