Rh6AG190700

CS domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
34097274 .. 34097663
390 bp
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UTR
Exon/CDS
Intron
Rh6AG190700.1

Sequence Viewer

Length: 183 bp
ATGGACTTTGGCGACATGGATTTCTCTAAGCTGAATATGGGTGGTGGGGGCGATGGTCTTGATGAATTCGATGATAGCAGTGACACTGAAGACGAGACCGCAGAAGCAGCACCATCTGCCTCTGCTGAATCTGATACCAAGCCTACTGCAAGTATGGAGCATGAAGCAAAACCTTCAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

60

Amino Acids

6.23

Weight (kDa)

4.05

Isoelectric Point (pI)

31.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013609)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 99
AcsI RAATTY 1 cut(s) 65
AcuI CTGAAG 2 cut(s) 108, 159
AluBI AGCT 1 cut(s) 31
AluI AGCT 1 cut(s) 31
Alw26I GTCTC 1 cut(s) 89
ApeKI GCWGC 1 cut(s) 107
ApoI RAATTY 1 cut(s) 65
BbsI GAAGAC 1 cut(s) 96
BbvI GCAGC 1 cut(s) 119
BccI CCATC 2 cut(s) 47, 121
BcoDI GTCTC 1 cut(s) 89
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
BpiI GAAGAC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 89
BseXI GCAGC 1 cut(s) 119
BsmAI GTCTC 1 cut(s) 89
Bso31I GGTCTC 1 cut(s) 89
BspACI CCGC 1 cut(s) 99
BspTNI GGTCTC 1 cut(s) 89
BstAPI GCANNNNNTGC 1 cut(s) 116
BstDEI CTNAG 1 cut(s) 27
BstMAI GTCTC 1 cut(s) 89
BstMWI GCNNNNNNNGC 2 cut(s) 107, 116
BstV1I GCAGC 1 cut(s) 119
BstV2I GAAGAC 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 85
BtsIMutI CAGTG 2 cut(s) 84, 85
CviAII CATG 2 cut(s) 16, 161
CviJI RGCY 2 cut(s) 31, 142
CviKI_1 RGCY 2 cut(s) 31, 142
DdeI CTNAG 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 89
Eco57I CTGAAG 2 cut(s) 108, 159
EcoRI GAATTC 1 cut(s) 65
FaeI CATG 2 cut(s) 19, 164
FaiI YATR 4 cut(s) 17, 38, 155, 162
FatI CATG 2 cut(s) 15, 160
Fnu4HI GCNGC 1 cut(s) 108
Fsp4HI GCNGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 108
Hin1II CATG 2 cut(s) 19, 164
HinfI GANTC 1 cut(s) 128
Hpy188I TCNGA 2 cut(s) 133, 182
Hpy188III TCNNGA 1 cut(s) 59
HpyAV CCTTC 1 cut(s) 183
HpyCH4V TGCA 1 cut(s) 149
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 116
HpyF3I CTNAG 1 cut(s) 27
Hsp92II CATG 2 cut(s) 19, 164
LmnI GCTCC 1 cut(s) 157
Lsp1109I GCAGC 1 cut(s) 119
MaeIII GTNAC 1 cut(s) 80
MboII GAAGA 1 cut(s) 101
MluCI AATT 1 cut(s) 65
MnlI CCTC 1 cut(s) 130
MwoI GCNNNNNNNGC 2 cut(s) 107, 116
NlaIII CATG 2 cut(s) 19, 164
NmuCI GTSAC 1 cut(s) 80
PfeI GAWTC 1 cut(s) 128
PkrI GCNGC 1 cut(s) 109
SatI GCNGC 1 cut(s) 108
SetI ASST 2 cut(s) 33, 175
SgeI CNNG 6 cut(s) 28, 71, 106, 151, 162, 173
Sse9I AATT 1 cut(s) 65
SsiI CCGC 1 cut(s) 99
TaqI TCGA 1 cut(s) 69
TasI AATT 1 cut(s) 65
TfiI GAWTC 1 cut(s) 128
TscAI CASTG 2 cut(s) 85, 91
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 1 cut(s) 107
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 2 cut(s) 78, 177
TspRI CASTG 2 cut(s) 85, 91
XapI RAATTY 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.