A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g31284 FvH4_5g31801 FvH4_7g31600 FvH4_7g31610 FvH4_7g33811 FvH4_7g33811 FvH4_7g33811 FvH4_7g33811 |
| rosa_chinensis | RchiOBHm_Chr4g0438521 |
| rosa_laevigata | RLG00000006355 |
| rosa_multiflora | Rmu_sc0002327.1_g000008 Rmu_sc0002327.1_g000009 |
| rosa_rugosa | Rorug04G0331500 |
| rosa_samantha | Rh4AG383000 Rh4BG372800 Rh4BG397000 Rh4CG386700 Rh4CG412000 Rh4DG389900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 254 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 242 |
| AgsI | TTSAA | 1 cut(s) | 136 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 164, 196 |
| Alw26I | GTCTC | 1 cut(s) | 292 |
| AlwI | GGATC | 1 cut(s) | 254 |
| AoxI | GGCC | 1 cut(s) | 270 |
| AsuC2I | CCSGG | 1 cut(s) | 281 |
| BaeGI | GKGCMC | 1 cut(s) | 281 |
| BauI | CACGAG | 1 cut(s) | 274 |
| BcnI | CCSGG | 1 cut(s) | 281 |
| BcoDI | GTCTC | 1 cut(s) | 292 |
| Bme1390I | CCNGG | 1 cut(s) | 281 |
| BmrFI | CCNGG | 1 cut(s) | 281 |
| BpuMI | CCSGG | 1 cut(s) | 281 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseMII | CTCAG | 1 cut(s) | 191 |
| BseRI | GAGGAG | 1 cut(s) | 198 |
| BseSI | GKGCMC | 1 cut(s) | 281 |
| BshFI | GGCC | 1 cut(s) | 272 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BsmAI | GTCTC | 1 cut(s) | 292 |
| BsnI | GGCC | 1 cut(s) | 272 |
| Bsp1286I | GDGCHC | 1 cut(s) | 281 |
| Bsp143I | GATC | 1 cut(s) | 259 |
| BspANI | GGCC | 1 cut(s) | 272 |
| BspCNI | CTCAG | 1 cut(s) | 190 |
| BspPI | GGATC | 1 cut(s) | 254 |
| BssMI | GATC | 1 cut(s) | 259 |
| BssSI | CACGAG | 1 cut(s) | 274 |
| Bst2BI | CACGAG | 1 cut(s) | 274 |
| Bst4CI | ACNGT | 2 cut(s) | 50, 142 |
| BstDEI | CTNAG | 1 cut(s) | 177 |
| BstKTI | GATC | 1 cut(s) | 262 |
| BstMAI | GTCTC | 1 cut(s) | 292 |
| BstMBI | GATC | 1 cut(s) | 259 |
| BstSCI | CCNGG | 1 cut(s) | 279 |
| BstSLI | GKGCMC | 1 cut(s) | 281 |
| BsuRI | GGCC | 1 cut(s) | 272 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| CviJI | RGCY | 3 cut(s) | 234, 246, 272 |
| CviKI_1 | RGCY | 3 cut(s) | 234, 246, 272 |
| DdeI | CTNAG | 1 cut(s) | 177 |
| DpnI | GATC | 1 cut(s) | 261 |
| DpnII | GATC | 1 cut(s) | 259 |
| Eco147I | AGGCCT | 1 cut(s) | 272 |
| FaiI | YATR | 6 cut(s) | 76, 83, 221, 254, 300, 307 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 45, 77 |
| HaeIII | GGCC | 1 cut(s) | 272 |
| HapII | CCGG | 1 cut(s) | 281 |
| HinfI | GANTC | 2 cut(s) | 69, 293 |
| HpaII | CCGG | 1 cut(s) | 281 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 3 cut(s) | 68, 202, 292 |
| Hpy188III | TCNNGA | 2 cut(s) | 228, 263 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| HpyAV | CCTTC | 1 cut(s) | 71 |
| HpyCH4III | ACNGT | 2 cut(s) | 50, 142 |
| HpyCH4V | TGCA | 2 cut(s) | 102, 147 |
| HpyF3I | CTNAG | 1 cut(s) | 177 |
| Kzo9I | GATC | 1 cut(s) | 259 |
| LpnPI | CCDG | 2 cut(s) | 48, 294 |
| MaeIII | GTNAC | 1 cut(s) | 44 |
| MalI | GATC | 1 cut(s) | 261 |
| MboI | GATC | 1 cut(s) | 259 |
| MboII | GAAGA | 7 cut(s) | 16, 19, 22, 25, 28, 65, 189 |
| MhlI | GDGCHC | 1 cut(s) | 281 |
| MlyI | GAGTC | 2 cut(s) | 63, 287 |
| MmeI | TCCRAC | 1 cut(s) | 91 |
| MnlI | CCTC | 4 cut(s) | 176, 186, 219, 283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| MspI | CCGG | 1 cut(s) | 281 |
| MspR9I | CCNGG | 1 cut(s) | 281 |
| NciI | CCSGG | 1 cut(s) | 281 |
| NdeII | GATC | 1 cut(s) | 259 |
| NmuCI | GTSAC | 1 cut(s) | 44 |
| PceI | AGGCCT | 1 cut(s) | 272 |
| PleI | GAGTC | 2 cut(s) | 63, 287 |
| PpsI | GAGTC | 2 cut(s) | 63, 287 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| Sau3AI | GATC | 1 cut(s) | 259 |
| SchI | GAGTC | 2 cut(s) | 63, 287 |
| ScrFI | CCNGG | 1 cut(s) | 281 |
| SduI | GDGCHC | 1 cut(s) | 281 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| SseBI | AGGCCT | 1 cut(s) | 272 |
| StuI | AGGCCT | 1 cut(s) | 272 |
| StyD4I | CCNGG | 1 cut(s) | 279 |
| TaaI | ACNGT | 2 cut(s) | 50, 142 |
| TaqI | TCGA | 2 cut(s) | 227, 258 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseFI | GTSAC | 1 cut(s) | 44 |
| Tsp45I | GTSAC | 1 cut(s) | 44 |
| TspDTI | ATGAA | 2 cut(s) | 17, 116 |
| TspRI | CASTG | 1 cut(s) | 55 |