Rmu_sc0002381.1_g000025

KAT8 regulatory NSL complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002381.1
OG0007737
Physical Location & Seq
Reverse (-)
83115 .. 86999
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1389 bp
atgagtgaagatcagaagggtgagattattcggatgttgggggtgccaactgtgatgttccatgaaagatatttaggactacctacaatagcaggaaaaaataagaaggaaatgtttaagaagattaatgaaagattggagtctcacttgcaaggatggcaatcaatgctcttgtctaaagcagggaagacagttcttattaaagctatggggcaggcaatcccttcctactctatgtcagtatttcgactccctaaaggagtttatcgttcttatcaaagcaaagtggccaagtactggtggggaaaaggaggaaacaagaggggaatacattggtgtaccgaggaggtcctagaaacaagaaggcatgaggactgggatttagagatctcgaatgcttcaaccaagagctgccagcaaagacagtgtggaggttggctcttcatccagagtcactcggttcgaatttgggaggacaaatggttaccaatgccgtggtcattcaagattgctactcctcgctttctgccagctaatgccatggtgaatcatctcatggaccaggcaggtgaaaagaatgtcaggtatgtggaagacaactttctccctgtggatgtggaaaaaattctttccattccacttgggggtgtgaattcagaggatgcagccatttggcatatttgtcctaatgggatggcttcaccaccaagtccaaaacgcaggcgtaaggatgacgatagaaatgaaacggcagcaacatcgccggagaaatcatcccctgtggtggtctttgctcacggcgccggtgctccctcttcttctgattggatgatcagatggaaggatatgttgggaaaagcactaaatgctgttgaagttgttgcctttgattacccatacatgtctggtgggaaaaagagagcccctccgaaggctgaaaagttggtcgattttcacgctgattttgtgaagaaaactgttgaaaagtacccaggtcatccattgattttggctggaaaatctatgggttcaagagtcagctgcatggtagcttgcaaggaagatattcatgcttcagcaattgtttgcttagggtacccactaaagggtattaatggggcactgcgagatgaaactctgttgcgactttcaattcctgtaatgtttgtccagggtagtaaagatgcactttgtccattggaaaacctagaagttactcgcaagaagataaaatgtcttagtggtttgcatgtgattgatggtggcgaccactccttcaagattggaaagaagcagctgcaaaccactgggttaacgcaagaccaagctgaagatcttgcagttgaggcaattgcagcctttctgtcaagttttcttggagaaaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_5 Abhydrolase_6 DLH

Protein Analysis

462

Amino Acids

51.6

Weight (kDa)

9.17

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_11 PF20408 260 - 455 1.1e-41 Alpha/beta hydrolase domain
Abhydrolase_1 PF00561 260 - 365 4.2e-09 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 262 - 368 8e-08 Alpha/beta hydrolase family
Abhydrolase_5 PF12695 319 - 425 1e-05 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 557
Acc36I ACCTGC 1 cut(s) 557
Acc65I GGTACC 1 cut(s) 1095
AccB1I GGYRCC 3 cut(s) 43, 800, 1095
AccB7I CCANNNNNTGG 1 cut(s) 297
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 3 cut(s) 465, 624, 652
AcuI CTGAAG 2 cut(s) 1059, 1350
AcyI GRCGYC 1 cut(s) 801
AfaI GTAC 4 cut(s) 296, 340, 989, 1097
AfiI CCNNNNNNNGG 6 cut(s) 297, 644, 784, 931, 1105, 1106
AflIII ACRYGT 1 cut(s) 900
AgsI TTSAA 7 cut(s) 402, 505, 875, 983, 1032, 1152, 1279
AjnI CCWGG 3 cut(s) 561, 991, 1170
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AluBI AGCT 7 cut(s) 206, 411, 533, 1041, 1052, 1297, 1328
AluI AGCT 7 cut(s) 206, 411, 533, 1041, 1052, 1297, 1328
Alw21I GWGCWC 1 cut(s) 811
Alw26I GTCTC 1 cut(s) 147
AoxI GGCC 1 cut(s) 288
ApeKI GCWGC 7 cut(s) 411, 665, 752, 1041, 1294, 1297, 1355
ApoI RAATTY 3 cut(s) 465, 624, 652
AseI ATTAAT 2 cut(s) 126, 1113
Asp700I GAANNNNTTC 2 cut(s) 624, 1065
Asp718I GGTACC 1 cut(s) 1095
AspLEI GCGC 1 cut(s) 803
AspS9I GGNCC 2 cut(s) 349, 559
AsuHPI GGTGA 4 cut(s) 32, 556, 581, 693
AsuII TTCGAA 1 cut(s) 463
AvaII GGWCC 2 cut(s) 349, 559
BaeGI GKGCMC 1 cut(s) 1123
BalI TGGCCA 1 cut(s) 290
BanI GGYRCC 3 cut(s) 43, 800, 1095
BanII GRGCYC 1 cut(s) 925
BbsI GAAGAC 2 cut(s) 194, 600
Bbv12I GWGCWC 1 cut(s) 811
BbvI GCAGC 7 cut(s) 398, 677, 764, 1028, 1284, 1306, 1367
BccI CCATC 4 cut(s) 150, 688, 831, 1253
BceAI ACGGC 3 cut(s) 478, 765, 814
BcgI CGANNNNNNTGC 2 cut(s) 741, 775
BciT130I CCWGG 3 cut(s) 563, 993, 1172
BclI TGATCA 1 cut(s) 831
BcoDI GTCTC 1 cut(s) 147
BfaI CTAG 2 cut(s) 353, 1208
BfoI RGCGCY 1 cut(s) 804
BfuAI ACCTGC 1 cut(s) 557
BglII AGATCT 2 cut(s) 387, 1333
BisI GCNGC 7 cut(s) 412, 666, 753, 1042, 1295, 1298, 1356
BlsI GCNGC 7 cut(s) 413, 667, 754, 1043, 1296, 1299, 1357
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 3 cut(s) 563, 993, 1172
Bme18I GGWCC 2 cut(s) 349, 559
BmgT120I GGNCC 2 cut(s) 349, 559
BmiI GGNNCC 3 cut(s) 45, 802, 1097
BmrFI CCNGG 3 cut(s) 563, 993, 1172
BmrI ACTGGG 2 cut(s) 385, 1317
BmsI GCATC 2 cut(s) 652, 1174
BmuI ACTGGG 2 cut(s) 385, 1317
BpiI GAAGAC 2 cut(s) 194, 600
BplI GAGNNNNNCTC 4 cut(s) 423, 455, 910, 942
Bpu10I CCTNAGC 1 cut(s) 1090
Bpu14I TTCGAA 1 cut(s) 463
BsaBI GATNNNNATC 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 801
BsaJI CCNNGG 5 cut(s) 342, 494, 540, 991, 1171
Bsc4I CCNNNNNNNGG 6 cut(s) 297, 644, 784, 931, 1105, 1106
Bse118I RCCGGY 1 cut(s) 803
Bse1I ACTGG 3 cut(s) 302, 380, 1312
Bse8I GATNNNNATC 1 cut(s) 160
BseBI CCWGG 3 cut(s) 563, 993, 1172
BseDI CCNNGG 5 cut(s) 342, 494, 540, 991, 1171
BseJI GATNNNNATC 1 cut(s) 160
BseLI CCNNNNNNNGG 6 cut(s) 297, 644, 784, 931, 1105, 1106
BseNI ACTGG 3 cut(s) 302, 380, 1312
BseRI GAGGAG 2 cut(s) 359, 507
BseSI GKGCMC 1 cut(s) 1123
BseXI GCAGC 7 cut(s) 398, 677, 764, 1028, 1284, 1306, 1367
BshFI GGCC 1 cut(s) 290
BshNI GGYRCC 3 cut(s) 43, 800, 1095
BsiHKAI GWGCWC 1 cut(s) 811
BsiSI CCGG 2 cut(s) 764, 804
BslI CCNNNNNNNGG 6 cut(s) 297, 644, 784, 931, 1105, 1106
BsmAI GTCTC 1 cut(s) 147
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 463
Bsp1286I GDGCHC 3 cut(s) 811, 925, 1123
Bsp143I GATC 4 cut(s) 10, 387, 831, 1333
Bsp19I CCATGG 1 cut(s) 540
BspANI GGCC 1 cut(s) 290
BspLI GGNNCC 3 cut(s) 45, 802, 1097
BspMI ACCTGC 1 cut(s) 557
BspQI GCTCTTC 1 cut(s) 446
BspT104I TTCGAA 1 cut(s) 463
BspT107I GGYRCC 3 cut(s) 43, 800, 1095
BsrFI RCCGGY 1 cut(s) 803
BsrI ACTGG 3 cut(s) 302, 380, 1312
BssAI RCCGGY 1 cut(s) 803
BssECI CCNNGG 5 cut(s) 342, 494, 540, 991, 1171
BssMI GATC 4 cut(s) 10, 387, 831, 1333
BssNI GRCGYC 1 cut(s) 801
BssT1I CCWWGG 1 cut(s) 540
Bst2UI CCWGG 3 cut(s) 563, 993, 1172
Bst4CI ACNGT 4 cut(s) 52, 193, 426, 979
Bst6I CTCTTC 2 cut(s) 446, 820
BstACI GRCGYC 1 cut(s) 801
BstAPI GCANNNNNTGC 2 cut(s) 166, 866
BstBI TTCGAA 1 cut(s) 463
BstC8I GCNNGC 5 cut(s) 216, 416, 531, 722, 1054
BstDEI CTNAG 2 cut(s) 1090, 1238
BstDSI CCRYGG 2 cut(s) 494, 540
BstEII GGTNACC 1 cut(s) 483
BstH2I RGCGCY 1 cut(s) 804
BstHHI GCGC 1 cut(s) 803
BstKTI GATC 4 cut(s) 13, 390, 834, 1336
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 4 cut(s) 10, 387, 831, 1333
BstMWI GCNNNNNNNGC 6 cut(s) 157, 166, 800, 866, 1346, 1355
BstNI CCWGG 3 cut(s) 563, 993, 1172
BstNSI RCATGY 2 cut(s) 904, 1253
BstPI GGTNACC 1 cut(s) 483
BstSCI CCNGG 3 cut(s) 561, 991, 1170
BstSLI GKGCMC 1 cut(s) 1123
BstV1I GCAGC 7 cut(s) 398, 677, 764, 1028, 1284, 1306, 1367
BstV2I GAAGAC 2 cut(s) 194, 600
BstX2I RGATCY 2 cut(s) 387, 1333
BstXI CCANNNNNNTGG 1 cut(s) 495
BstYI RGATCY 2 cut(s) 387, 1333
BsuRI GGCC 1 cut(s) 290
BtgI CCRYGG 2 cut(s) 494, 540
BtgZI GCGATG 1 cut(s) 744
BtsI GCAGTG 1 cut(s) 1121
BtsIMutI CAGTG 3 cut(s) 431, 1121, 1305
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 5 cut(s) 216, 416, 531, 722, 1054
CfoI GCGC 1 cut(s) 803
Cfr10I RCCGGY 1 cut(s) 803
Cfr13I GGNCC 2 cut(s) 349, 559
Csp6I GTAC 4 cut(s) 295, 339, 988, 1096
CviAII CATG 8 cut(s) 62, 368, 541, 556, 901, 1045, 1070, 1250
CviQI GTAC 4 cut(s) 295, 339, 988, 1096
DdeI CTNAG 2 cut(s) 1090, 1238
DinI GGCGCC 1 cut(s) 802
DpnI GATC 4 cut(s) 12, 389, 833, 1335
DpnII GATC 4 cut(s) 10, 387, 831, 1333
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 2 cut(s) 446, 820
EarI CTCTTC 2 cut(s) 446, 820
Eco130I CCWWGG 1 cut(s) 540
Eco24I GRGCYC 1 cut(s) 925
Eco47I GGWCC 2 cut(s) 349, 559
Eco57I CTGAAG 2 cut(s) 1059, 1350
Eco91I GGTNACC 1 cut(s) 483
EcoO109I RGGNCCY 1 cut(s) 349
EcoO65I GGTNACC 1 cut(s) 483
EcoRI GAATTC 1 cut(s) 652
EcoRII CCWGG 3 cut(s) 561, 991, 1170
EcoT14I CCWWGG 1 cut(s) 540
EcoT38I GRGCYC 1 cut(s) 925
EgeI GGCGCC 1 cut(s) 802
EheI GGCGCC 1 cut(s) 802
ErhI CCWWGG 1 cut(s) 540
FaeI CATG 8 cut(s) 65, 371, 544, 559, 904, 1048, 1073, 1253
FalI AAGNNNNNCTT 2 cut(s) 1173, 1205
FatI CATG 8 cut(s) 61, 367, 540, 555, 900, 1044, 1069, 1249
FbaI TGATCA 1 cut(s) 831
Fnu4HI GCNGC 7 cut(s) 412, 666, 753, 1042, 1295, 1298, 1356
FriOI GRGCYC 1 cut(s) 925
Fsp4HI GCNGC 7 cut(s) 412, 666, 753, 1042, 1295, 1298, 1356
FspBI CTAG 2 cut(s) 353, 1208
GlaI GCGC 1 cut(s) 802
GluI GCNGC 7 cut(s) 412, 666, 753, 1042, 1295, 1298, 1356
HaeII RGCGCY 1 cut(s) 804
HaeIII GGCC 1 cut(s) 290
HapII CCGG 2 cut(s) 764, 804
HhaI GCGC 1 cut(s) 803
Hin1I GRCGYC 1 cut(s) 801
Hin1II CATG 8 cut(s) 65, 371, 544, 559, 904, 1048, 1073, 1253
Hin6I GCGC 1 cut(s) 801
HinP1I GCGC 1 cut(s) 801
HincII GTYRAC 1 cut(s) 1314
HindII GTYRAC 1 cut(s) 1314
HinfI GANTC 5 cut(s) 140, 249, 451, 547, 1035
HpaI GTTAAC 1 cut(s) 1314
HpaII CCGG 2 cut(s) 764, 804
HphI GGTGA 4 cut(s) 32, 556, 581, 693
Hpy166II GTNNAC 2 cut(s) 339, 1314
Hpy188I TCNGA 6 cut(s) 15, 33, 658, 823, 836, 930
Hpy188III TCNNGA 5 cut(s) 391, 448, 505, 1032, 1279
Hpy8I GTNNAC 2 cut(s) 339, 1314
HpyAV CCTTC 7 cut(s) 10, 100, 234, 357, 835, 925, 1285
HpyCH4III ACNGT 4 cut(s) 52, 193, 426, 979
HpyCH4V TGCA 9 cut(s) 151, 665, 1044, 1056, 1187, 1249, 1300, 1340, 1355
HpyF10VI GCNNNNNNNGC 6 cut(s) 157, 166, 800, 866, 1346, 1355
HpyF3I CTNAG 2 cut(s) 1090, 1238
Hsp92I GRCGYC 1 cut(s) 801
Hsp92II CATG 8 cut(s) 65, 371, 544, 559, 904, 1048, 1073, 1253
HspAI GCGC 1 cut(s) 801
KasI GGCGCC 1 cut(s) 800
KpnI GGTACC 1 cut(s) 1099
Ksp22I TGATCA 1 cut(s) 831
KspAI GTTAAC 1 cut(s) 1314
Kzo9I GATC 4 cut(s) 10, 387, 831, 1333
LguI GCTCTTC 1 cut(s) 446
LmnI GCTCC 1 cut(s) 814
Lsp1109I GCAGC 7 cut(s) 398, 677, 764, 1028, 1284, 1306, 1367
LweI GCATC 2 cut(s) 652, 1174
MaeI CTAG 2 cut(s) 353, 1208
MaeIII GTNAC 3 cut(s) 452, 483, 1213
MalI GATC 4 cut(s) 12, 389, 833, 1335
MboI GATC 4 cut(s) 10, 387, 831, 1333
MfeI CAATTG 2 cut(s) 1080, 1350
MflI RGATCY 2 cut(s) 387, 1333
MhlI GDGCHC 3 cut(s) 811, 925, 1123
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 6 cut(s) 465, 624, 652, 1080, 1152, 1350
MluNI TGGCCA 1 cut(s) 290
Mly113I GGCGCC 1 cut(s) 801
MlyI GAGTC 4 cut(s) 149, 243, 460, 1044
Mox20I TGGCCA 1 cut(s) 290
MroXI GAANNNNTTC 2 cut(s) 624, 1065
MscI TGGCCA 1 cut(s) 290
MseI TTAA 5 cut(s) 117, 126, 201, 1113, 1313
Msp20I TGGCCA 1 cut(s) 290
MspA1I CMGCKG 2 cut(s) 1041, 1297
MspI CCGG 2 cut(s) 764, 804
MspR9I CCNGG 3 cut(s) 563, 993, 1172
MunI CAATTG 2 cut(s) 1080, 1350
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 3 cut(s) 563, 993, 1172
MwoI GCNNNNNNNGC 6 cut(s) 157, 166, 800, 866, 1346, 1355
NarI GGCGCC 1 cut(s) 801
NcoI CCATGG 1 cut(s) 540
NdeII GATC 4 cut(s) 10, 387, 831, 1333
NlaIII CATG 8 cut(s) 65, 371, 544, 559, 904, 1048, 1073, 1253
NlaIV GGNNCC 3 cut(s) 45, 802, 1097
NmuCI GTSAC 1 cut(s) 452
NspI RCATGY 2 cut(s) 904, 1253
NspV TTCGAA 1 cut(s) 463
PaqCI CACCTGC 1 cut(s) 557
PciI ACATGT 1 cut(s) 900
PciSI GCTCTTC 1 cut(s) 446
PctI GAATGC 1 cut(s) 400
PdmI GAANNNNTTC 2 cut(s) 624, 1065
PfeI GAWTC 1 cut(s) 547
PflMI CCANNNNNTGG 1 cut(s) 297
PkrI GCNGC 7 cut(s) 413, 667, 754, 1043, 1296, 1299, 1357
PleI GAGTC 4 cut(s) 148, 243, 459, 1043
PluTI GGCGCC 1 cut(s) 804
PpsI GAGTC 4 cut(s) 148, 243, 459, 1043
PpuMI RGGWCCY 1 cut(s) 349
PscI ACATGT 1 cut(s) 900
PshBI ATTAAT 2 cut(s) 126, 1113
Psp5II RGGWCCY 1 cut(s) 349
Psp6I CCWGG 3 cut(s) 561, 991, 1170
PspEI GGTNACC 1 cut(s) 483
PspGI CCWGG 3 cut(s) 561, 991, 1170
PspN4I GGNNCC 3 cut(s) 45, 802, 1097
PspPI GGNCC 2 cut(s) 349, 559
PspPPI RGGWCCY 1 cut(s) 349
PsuI RGATCY 2 cut(s) 387, 1333
PvuII CAGCTG 2 cut(s) 1041, 1297
RsaI GTAC 4 cut(s) 296, 340, 989, 1097
RsaNI GTAC 4 cut(s) 295, 339, 988, 1096
SapI GCTCTTC 1 cut(s) 446
SaqAI TTAA 5 cut(s) 117, 126, 201, 1113, 1313
SatI GCNGC 7 cut(s) 412, 666, 753, 1042, 1295, 1298, 1356
Sau3AI GATC 4 cut(s) 10, 387, 831, 1333
Sau96I GGNCC 2 cut(s) 349, 559
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 4 cut(s) 149, 243, 460, 1044
ScrFI CCNGG 3 cut(s) 563, 993, 1172
SduI GDGCHC 3 cut(s) 811, 925, 1123
SfaNI GCATC 2 cut(s) 652, 1174
SfoI GGCGCC 1 cut(s) 802
SfuI TTCGAA 1 cut(s) 463
SgrAI CRCCGGYG 1 cut(s) 803
SinI GGWCC 2 cut(s) 349, 559
Sse9I AATT 6 cut(s) 465, 624, 652, 1080, 1152, 1350
SspDI GGCGCC 1 cut(s) 800
SspMI CTAG 2 cut(s) 353, 1208
StyD4I CCNGG 3 cut(s) 561, 991, 1170
StyI CCWWGG 1 cut(s) 540
TaaI ACNGT 4 cut(s) 52, 193, 426, 979
TaqI TCGA 4 cut(s) 247, 392, 463, 948
TasI AATT 6 cut(s) 465, 624, 652, 1080, 1152, 1350
TatI WGTACW 1 cut(s) 294
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 5 cut(s) 117, 126, 201, 1113, 1313
Tru9I TTAA 5 cut(s) 117, 126, 201, 1113, 1313
TscAI CASTG 3 cut(s) 431, 1128, 1312
TseFI GTSAC 1 cut(s) 452
TseI GCWGC 7 cut(s) 411, 665, 752, 1041, 1294, 1297, 1355
Tsp45I GTSAC 1 cut(s) 452
TspDTI ATGAA 6 cut(s) 78, 144, 433, 759, 1058, 1146
TspRI CASTG 3 cut(s) 431, 1128, 1312
Van91I CCANNNNNTGG 1 cut(s) 297
VpaK11BI GGWCC 2 cut(s) 349, 559
VspI ATTAAT 2 cut(s) 126, 1113
XapI RAATTY 3 cut(s) 465, 624, 652
XceI RCATGY 2 cut(s) 904, 1253
XmnI GAANNNNTTC 2 cut(s) 624, 1065
XspI CTAG 2 cut(s) 353, 1208
ZrmI AGTACT 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.