Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002505.1

Orthogroup ID

OG0006857

Physical Location & Seq

Genomic Coordinates Forward (+)

73777 .. 82696

Gene Structure 8920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002505.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

atgtaccggactgtggctgcagctacaacctcaactcggggtggatctcccaccgatagtggggattatgtggttagtttggatcaagtgccgcggtggagcaatgcagagcatcggtcctctatggaatatgacaatgaggatccgtccttttcaaactcttacttccctgatcctttaacttctcagtccggggctcaaaatggtctcaatgcgatagtttcgaggtttccagttgatcatgaaattaattcaaagatatatttgtggagggggaacccttggaatctcgaagttgatgctgtagtaaactctacaaatgagaacatggatgaagcacactgcagccctggcttgcatgctgcagctggacctggtcttgcagaagaatgtgcctcattgggtggatgccgaacagggatggcaaaggttactaaagcttacgaccttccagctaggaggattatccatactgttggtcccaagtatgctgtgaagtaccatactgctgcagaaaatgctctgagccactgctaccgttcttgtcttgaactcctcattgaaaatggactgcaaagcattgcaatgggctgtatatatacagaggctaagaactatcctcgtgagccagctgcccatgttgctataaggactgtgcgacggtttctcgagaaacagaaggataaaattgcagctgttgtcttttgtactaccacatcaactgatacagaaatttacaaaagattgcttccgctttactttcctcgagatagacttgaagaggaggttgccatgtcaaaacttcctgcagatgtaggcgatgaaaatggtgagacaattatagatgaacgcaaaatcagaataaagcctttgcccaaaaaaactgctccaaagcctccacaagctccggttgaccttcctgttagtgatgtaggcttggcacggaggaactcatcacatttggattcgtatctggatccggcctttatgtctttaataaaagatccggaccagagacgcagggaacaatgggaaaaaactgctcaagcccaaagtggatggaattgtgctaaaatgcttggctttggtgatcttggtggacctccattgtctgctgcagaagaatactcgcttcattcaagataccttgctaaagcaaactctctcaatctttcagaaattgcggaaatgaaaattgtctaccgaggtggagttgacagcgagggtcgtcctgtaatggtagttgtgggggcacattttctgttgcgatgtcttgatctagaacgatttgtgcattatgttgtcaaggagtttgagcccataatacagaagccttatactgttgtgtacttccactctgctgcatctctacagcttcaaccagacttggggtggatgagaagattacaacaaatacttggtcgtaaacaccaacgtaatctgcatgcaatatatgtccttcaccctacatttggacttaaggcggctgtttttgctatgcaattgtttgtggacagtgtggtctggaagaaagtggtatatgtggatagattactgcagctcttcagatatgttcctcgtgagcagttgaccatccccgactttgtgttccagcatgatttggaagtgaatggtgggaagggtcttattgtggacccaagaacaaagtacgtgtatcatcttttcataaatattggggattcaatatcttataaaatcttgaagacgaagacgcacgttggcctcgttgctttctccgatgctgatgttggtttgaaaagagtctgggaaaaaacaagggtattgttgaaaatggtgcaaggtttgtcactgagcactctggctacgtcgcgtagcagttgtgtttgtggatcaatgccttcatggaggaggcattttagagtaatgaggaaagaccagataagtagcgaaagaaatttcatgtggcatcagtgtgatcatagcgtattcgtgaaaggtaaccctgatatgttgaggcaaaggaatgtaagggtggaagctgggtggctgtttaaagggggtgatcgggggtcggatgcaatctcagagcgcagtgagagtgctaatgaggatattttgatattcttcttccagctggacctggcaactcgagtccagtatgcattgaacatggaagagtatgacattgcacaacaactgagaaccaagctggctgaggttgaagcagaagttgctaggcagcaggaggggaaaaggggatcgtcttcaaagagtgaagctcaagataaggctataagtctcattcgcttacgggcagacctgcagggtgcaattgagagtgagaattatgcattggcagccaagctacgggatgaaatttccaaactggaggcagagtcattggctatatcagccaaagctttggcacatgaaaatgcaaactattcgtttcgtttgggacagagagtgaggcataaaatttttggctatagggctgtggtttgtggaatggatccggtgtgctgtgaatcaagttcatggatggaaactgctcaagttgaaaagttgtctcggggttctaatcagccattttatcaggttttggttgatgttcatgcagatcccaaccttctggtggcttatgttgctgaggagaatctattggcccctgacaaaccagacttggatcgatttgatcatccctatatttccttcttattctatgggatggatgcagctggtgatttcatccctatcaagcaactacgcgagaagtacaacaggccgcgacatgaaataccgctcgatgaggagcctggacgcgatgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO_2 Macro

Protein Analysis

937

Amino Acids

105.69

Weight (kDa)

7.14

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69340 AT1G69340
fragaria_vesca	FvH4_4g30490 FvH4_4g30490 FvH4_4g30490 FvH4_4g30490
malus_domestica	MD13G1066000.v1.1 MD16G1064800.v1.1
prunus_persica	Prupe.1G282100_v2.0.a1 Prupe.1G282100_v2.0.a1
pyrus_communis	pycom13g05820 pycom16g05660
rosa_chinensis	RchiOBHm_Chr4g0438861
rosa_laevigata	RLG00000006324
rosa_multiflora	Rmu_sc0002505.1_g000021
rosa_roxburghii	Rroxscaffold_5G00379880 Rroxscaffold_7G00178430
rosa_rugosa	Rorug04G0313600 Rorug04G0313700 Rorug04G0313800
rosa_samantha	Rh4AG364600 Rh4BG375700 Rh4CG389800 Rh4DG370400
rosa_wichuraiana	Rw0G007270 Rw0G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AasI	GACNNNNNNGTC	1 cut(s)	1520
Acc36I	ACCTGC	1 cut(s)	2310
AccBSI	CCGCTC	1 cut(s)	2785
AccI	GTMKAC	1 cut(s)	1200
AccII	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
AccIII	TCCGGA	1 cut(s)	1006
AciI	CCGC	7 cut(s)	92, 94, 752, 1184, 1484, 2768, 2783
AcsI	RAATTY	4 cut(s)	732, 1936, 2358, 2460
AcuI	CTGAAG	1 cut(s)	1549
AfaI	GTAC	6 cut(s)	5, 500, 709, 1349, 1670, 2759
AfiI	CCNNNNNNNGG	7 cut(s)	13, 36, 60, 1388, 1472, 2349, 2617
AflII	CTTAAG	1 cut(s)	1478
AflIII	ACRYGT	1 cut(s)	1671
AjnI	CCWGG	4 cut(s)	349, 373, 2121, 2797
AjuI	GAANNNNNNNTTGG	2 cut(s)	2318, 2350
Alw21I	GWGCWC	1 cut(s)	1838
Alw26I	GTCTC	5 cut(s)	212, 827, 1009, 2285, 2556
Ama87I	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
Aor13HI	TCCGGA	1 cut(s)	1006
AoxI	GGCC	4 cut(s)	981, 1741, 2646, 2765
ApoI	RAATTY	4 cut(s)	732, 1936, 2358, 2460
ArsI	GACNNNNNNTTYG	2 cut(s)	1405, 1437
AseI	ATTAAT	1 cut(s)	249
AspLEI	GCGC	1 cut(s)	2073
AspS9I	GGNCC	8 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119, 2647
AsuC2I	CCSGG	1 cut(s)	193
AsuHPI	GGTGA	5 cut(s)	842, 1100, 1454, 2054, 2735
AvaI	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
AvaII	GGWCC	7 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119
BaeGI	GKGCMC	1 cut(s)	1255
BamHI	GGATCC	3 cut(s)	142, 976, 2494
BanII	GRGCYC	2 cut(s)	199, 1320
BauI	CACGAG	2 cut(s)	621, 1578
BbsI	GAAGAC	3 cut(s)	1730, 1736, 2238
Bbv12I	GWGCWC	1 cut(s)	1838
BbvCI	CCTCAGC	2 cut(s)	2196, 2631
BccI	CCATC	5 cut(s)	415, 1053, 1601, 2518, 2704
BcgI	CGANNNNNNTGC	4 cut(s)	281, 315, 2409, 2443
BciT130I	CCWGG	4 cut(s)	351, 375, 2123, 2799
BclI	TGATCA	3 cut(s)	238, 1957, 2677
BcnI	CCSGG	1 cut(s)	193
BcoDI	GTCTC	5 cut(s)	212, 827, 1009, 2285, 2556
BfaI	CTAG	3 cut(s)	456, 1280, 2217
BfrI	CTTAAG	1 cut(s)	1478
BfuAI	ACCTGC	1 cut(s)	2310
Bme1390I	CCNGG	5 cut(s)	193, 351, 375, 2123, 2799
Bme18I	GGWCC	7 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119
BmeT110I	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
BmgT120I	GGNCC	8 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119, 2647
BmiI	GGNNCC	8 cut(s)	144, 278, 481, 978, 1656, 2496, 2649, 2796
BmrFI	CCNGG	5 cut(s)	193, 351, 375, 2123, 2799
BmsI	GCATC	9 cut(s)	121, 289, 398, 1373, 1750, 1957, 2047, 2704, 2797
BpiI	GAAGAC	3 cut(s)	1730, 1736, 2238
BplI	GAGNNNNNCTC	2 cut(s)	2245, 2277
BpmI	CTGGAG	1 cut(s)	2390
Bpu10I	CCTNAGC	2 cut(s)	2196, 2631
BpuEI	CTTGAG	3 cut(s)	1029, 2247, 2520
BpuMI	CCSGG	1 cut(s)	193
Bsa29I	ATCGAT	1 cut(s)	2671
BsaAI	YACGTR	1 cut(s)	1672
BsaBI	GATNNNNATC	1 cut(s)	969
BsaI	GGTCTC	1 cut(s)	212
BsaJI	CCNNGG	5 cut(s)	92, 192, 281, 349, 1204
BsaWI	WCCGGW	4 cut(s)	6, 907, 1006, 2497
BsaXI	ACNNNNNCTCC	2 cut(s)	2363, 2393
Bsc4I	CCNNNNNNNGG	7 cut(s)	13, 36, 60, 1388, 1472, 2349, 2617
Bse1I	ACTGG	3 cut(s)	233, 2137, 2373
Bse3DI	GCAATG	4 cut(s)	109, 579, 591, 2166
Bse8I	GATNNNNATC	1 cut(s)	969
BseAI	TCCGGA	1 cut(s)	1006
BseBI	CCWGG	4 cut(s)	351, 375, 2123, 2799
BseCI	ATCGAT	1 cut(s)	2671
BseDI	CCNNGG	5 cut(s)	92, 192, 281, 349, 1204
BseJI	GATNNNNATC	1 cut(s)	969
BseLI	CCNNNNNNNGG	7 cut(s)	13, 36, 60, 1388, 1472, 2349, 2617
BseMI	GCAATG	4 cut(s)	109, 579, 591, 2166
BseMII	CTCAG	7 cut(s)	200, 515, 1823, 2079, 2171, 2187, 2622
BseNI	ACTGG	3 cut(s)	233, 2137, 2373
BseRI	GAGGAG	5 cut(s)	545, 797, 1903, 2648, 2807
BseSI	GKGCMC	1 cut(s)	1255
BseYI	CCCAGC	1 cut(s)	2021
Bsh1236I	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
BshFI	GGCC	4 cut(s)	983, 1743, 2648, 2767
BshVI	ATCGAT	1 cut(s)	2671
BsiHKAI	GWGCWC	1 cut(s)	1838
BsiHKCI	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
BsiSI	CCGG	6 cut(s)	7, 192, 908, 980, 1007, 2498
BslFI	GGGAC	2 cut(s)	465, 2454
BslI	CCNNNNNNNGG	7 cut(s)	13, 36, 60, 1388, 1472, 2349, 2617
BsmAI	GTCTC	5 cut(s)	212, 827, 1009, 2285, 2556
BsmBI	CGTCTC	1 cut(s)	1009
BsmFI	GGGAC	2 cut(s)	465, 2454
BsnI	GGCC	4 cut(s)	983, 1743, 2648, 2767
Bso31I	GGTCTC	1 cut(s)	212
BsoBI	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
Bsp1286I	GDGCHC	4 cut(s)	199, 1255, 1320, 1838
Bsp13I	TCCGGA	1 cut(s)	1006
BspACI	CCGC	7 cut(s)	92, 94, 752, 1184, 1484, 2768, 2783
BspANI	GGCC	4 cut(s)	983, 1743, 2648, 2767
BspCNI	CTCAG	7 cut(s)	199, 516, 1824, 2078, 2172, 2188, 2623
BspDI	ATCGAT	1 cut(s)	2671
BspEI	TCCGGA	1 cut(s)	1006
BspFNI	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	8 cut(s)	144, 278, 481, 978, 1656, 2496, 2649, 2796
BspMAI	CTGCAG	8 cut(s)	22, 347, 367, 514, 811, 1120, 1560, 2307
BspMI	ACCTGC	1 cut(s)	2310
BspQI	GCTCTTC	1 cut(s)	1568
BspTI	CTTAAG	1 cut(s)	1478
BspTNI	GGTCTC	1 cut(s)	212
BsrBI	CCGCTC	1 cut(s)	2785
BsrDI	GCAATG	4 cut(s)	109, 579, 591, 2166
BsrI	ACTGG	3 cut(s)	233, 2137, 2373
BssECI	CCNNGG	5 cut(s)	92, 192, 281, 349, 1204
BssSI	CACGAG	2 cut(s)	621, 1578
BssT1I	CCWWGG	1 cut(s)	281
Bst2BI	CACGAG	2 cut(s)	621, 1578
Bst2UI	CCWGG	4 cut(s)	351, 375, 2123, 2799
Bst4CI	ACNGT	7 cut(s)	13, 475, 539, 655, 663, 1342, 1517
Bst6I	CTCTTC	3 cut(s)	774, 1568, 2151
BstAFI	CTTAAG	1 cut(s)	1478
BstAPI	GCANNNNNTGC	2 cut(s)	518, 2213
BstBAI	YACGTR	1 cut(s)	1672
BstC8I	GCNNGC	5 cut(s)	356, 360, 630, 1446, 2193
BstDEI	CTNAG	9 cut(s)	186, 524, 609, 1832, 2065, 2180, 2196, 2631, 2811
BstDSI	CCRYGG	1 cut(s)	92
BstEII	GGTNACC	1 cut(s)	1979
BstFNI	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
BstHHI	GCGC	1 cut(s)	2073
BstMAI	GTCTC	5 cut(s)	212, 827, 1009, 2285, 2556
BstMWI	GCNNNNNNNGC	8 cut(s)	351, 518, 641, 1493, 2213, 2339, 2393, 2627
BstNI	CCWGG	4 cut(s)	351, 375, 2123, 2799
BstNSI	RCATGY	2 cut(s)	362, 1448
BstPI	GGTNACC	1 cut(s)	1979
BstSCI	CCNGG	5 cut(s)	191, 349, 373, 2121, 2797
BstSLI	GKGCMC	1 cut(s)	1255
BstUI	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
BstV2I	GAAGAC	3 cut(s)	1730, 1736, 2238
BstX2I	RGATCY	6 cut(s)	44, 142, 976, 1003, 2494, 2602
BstXI	CCANNNNNNTGG	3 cut(s)	476, 2404, 2614
BstYI	RGATCY	6 cut(s)	44, 142, 976, 1003, 2494, 2602
Bsu15I	ATCGAT	1 cut(s)	2671
BsuRI	GGCC	4 cut(s)	983, 1743, 2648, 2767
BsuTUI	ATCGAT	1 cut(s)	2671
BtgI	CCRYGG	1 cut(s)	92
BtgZI	GCGATG	2 cut(s)	834, 1282
BtsI	GCAGTG	3 cut(s)	340, 529, 2080
BtsIMutI	CAGTG	6 cut(s)	340, 529, 1522, 1829, 1958, 2080
BveI	ACCTGC	1 cut(s)	2310
Cac8I	GCNNGC	5 cut(s)	356, 360, 630, 1446, 2193
CciI	TCATGA	1 cut(s)	241
CfoI	GCGC	1 cut(s)	2073
Cfr13I	GGNCC	8 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119, 2647
Cfr42I	CCGCGG	1 cut(s)	95
ClaI	ATCGAT	1 cut(s)	2671
CseI	GACGC	2 cut(s)	1026, 1741
CsiI	ACCWGGT	1 cut(s)	373
Csp6I	GTAC	6 cut(s)	4, 499, 708, 1348, 1669, 2758
CviQI	GTAC	6 cut(s)	4, 499, 708, 1348, 1669, 2758
DdeI	CTNAG	9 cut(s)	186, 524, 609, 1832, 2065, 2180, 2196, 2631, 2811
DraI	TTTAAA	1 cut(s)	2035
DrdI	GACNNNNNNGTC	1 cut(s)	1520
DseDI	GACNNNNNNGTC	1 cut(s)	1520
Eam1104I	CTCTTC	3 cut(s)	774, 1568, 2151
EarI	CTCTTC	3 cut(s)	774, 1568, 2151
Eco130I	CCWWGG	1 cut(s)	281
Eco24I	GRGCYC	2 cut(s)	199, 1320
Eco31I	GGTCTC	1 cut(s)	212
Eco47I	GGWCC	7 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119
Eco57I	CTGAAG	1 cut(s)	1549
Eco88I	CYCGRG	5 cut(s)	36, 668, 765, 2130, 2553
Eco91I	GGTNACC	1 cut(s)	1979
EcoO65I	GGTNACC	1 cut(s)	1979
EcoRII	CCWGG	4 cut(s)	349, 373, 2121, 2797
EcoT14I	CCWWGG	1 cut(s)	281
EcoT22I	ATGCAT	2 cut(s)	2146, 2335
EcoT38I	GRGCYC	2 cut(s)	199, 1320
ErhI	CCWWGG	1 cut(s)	281
Esp3I	CGTCTC	1 cut(s)	1009
FaqI	GGGAC	2 cut(s)	465, 2454
FbaI	TGATCA	3 cut(s)	238, 1957, 2677
FblI	GTMKAC	1 cut(s)	1200
FriOI	GRGCYC	2 cut(s)	199, 1320
FspBI	CTAG	3 cut(s)	456, 1280, 2217
GlaI	GCGC	1 cut(s)	2072
GsaI	CCCAGC	1 cut(s)	2025
GsuI	CTGGAG	1 cut(s)	2390
HaeIII	GGCC	4 cut(s)	983, 1743, 2648, 2767
HapII	CCGG	6 cut(s)	7, 192, 908, 980, 1007, 2498
HgaI	GACGC	2 cut(s)	1026, 1741
HhaI	GCGC	1 cut(s)	2073
Hin6I	GCGC	1 cut(s)	2071
HinP1I	GCGC	1 cut(s)	2071
HincII	GTYRAC	3 cut(s)	913, 1216, 1590
HindII	GTYRAC	3 cut(s)	913, 1216, 1590
HindIII	AAGCTT	2 cut(s)	438, 2400
HinfI	GANTC	8 cut(s)	286, 965, 1700, 1782, 2133, 2378, 2510, 2638
HpaII	CCGG	6 cut(s)	7, 192, 908, 980, 1007, 2498
HphI	GGTGA	5 cut(s)	842, 1100, 1454, 2054, 2735
Hpy188I	TCNGA	7 cut(s)	525, 860, 1177, 1568, 1759, 2056, 2068
Hpy99I	CGWCG	2 cut(s)	663, 1852
HpyAV	CCTTC	8 cut(s)	458, 673, 926, 1469, 1633, 1890, 2621, 2704
HpyCH4III	ACNGT	7 cut(s)	13, 475, 539, 655, 663, 1342, 1517
HpyCH4IV	ACGT	4 cut(s)	1435, 1671, 1737, 1847
HpyF10VI	GCNNNNNNNGC	8 cut(s)	351, 518, 641, 1493, 2213, 2339, 2393, 2627
HpyF3I	CTNAG	9 cut(s)	186, 524, 609, 1832, 2065, 2180, 2196, 2631, 2811
HpySE526I	ACGT	4 cut(s)	1435, 1671, 1737, 1847
HspAI	GCGC	1 cut(s)	2071
Kpn2I	TCCGGA	1 cut(s)	1006
Ksp22I	TGATCA	3 cut(s)	238, 1957, 2677
KspI	CCGCGG	1 cut(s)	95
LguI	GCTCTTC	1 cut(s)	1568
LmnI	GCTCC	4 cut(s)	99, 892, 910, 2794
LweI	GCATC	9 cut(s)	121, 289, 398, 1373, 1750, 1957, 2047, 2704, 2797
MabI	ACCWGGT	1 cut(s)	373
MaeI	CTAG	3 cut(s)	456, 1280, 2217
MaeII	ACGT	4 cut(s)	1435, 1671, 1737, 1847
MaeIII	GTNAC	3 cut(s)	430, 1827, 1979
MbiI	CCGCTC	1 cut(s)	2785
MfeI	CAATTG	2 cut(s)	1502, 2313
MflI	RGATCY	6 cut(s)	44, 142, 976, 1003, 2494, 2602
MhlI	GDGCHC	4 cut(s)	199, 1255, 1320, 1838
MlyI	GAGTC	3 cut(s)	1791, 2142, 2387
MmeI	TCCRAC	1 cut(s)	2034
Mph1103I	ATGCAT	2 cut(s)	2146, 2335
MroI	TCCGGA	1 cut(s)	1006
MseI	TTAA	5 cut(s)	179, 249, 995, 1479, 2034
MslI	CAYNNNNRTG	3 cut(s)	584, 1953, 2415
MspA1I	CMGCKG	6 cut(s)	94, 368, 632, 695, 2116, 2720
MspCI	CTTAAG	1 cut(s)	1478
MspI	CCGG	6 cut(s)	7, 192, 908, 980, 1007, 2498
MspR9I	CCNGG	5 cut(s)	193, 351, 375, 2123, 2799
MunI	CAATTG	2 cut(s)	1502, 2313
MvaI	CCWGG	4 cut(s)	351, 375, 2123, 2799
MvnI	CGCG	5 cut(s)	94, 1852, 2751, 2770, 2805
MwoI	GCNNNNNNNGC	8 cut(s)	351, 518, 641, 1493, 2213, 2339, 2393, 2627
NciI	CCSGG	1 cut(s)	193
NlaIV	GGNNCC	8 cut(s)	144, 278, 481, 978, 1656, 2496, 2649, 2796
NmuCI	GTSAC	1 cut(s)	1827
NsiI	ATGCAT	2 cut(s)	2146, 2335
NspI	RCATGY	2 cut(s)	362, 1448
PaeI	GCATGC	2 cut(s)	362, 1448
PaeR7I	CTCGAG	3 cut(s)	668, 765, 2130
PagI	TCATGA	1 cut(s)	241
PciSI	GCTCTTC	1 cut(s)	1568
PcsI	WCGNNNNNNNCGW	1 cut(s)	1743
PfeI	GAWTC	5 cut(s)	286, 965, 1700, 2510, 2638
PflFI	GACNNNGTC	1 cut(s)	375
PleI	GAGTC	3 cut(s)	1790, 2141, 2386
PpsI	GAGTC	3 cut(s)	1790, 2141, 2386
Ppu21I	YACGTR	1 cut(s)	1672
PshBI	ATTAAT	1 cut(s)	249
PsiI	TTATAA	1 cut(s)	1713
Psp6I	CCWGG	4 cut(s)	349, 373, 2121, 2797
PspEI	GGTNACC	1 cut(s)	1979
PspFI	CCCAGC	1 cut(s)	2021
PspGI	CCWGG	4 cut(s)	349, 373, 2121, 2797
PspN4I	GGNNCC	8 cut(s)	144, 278, 481, 978, 1656, 2496, 2649, 2796
PspPI	GGNCC	8 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119, 2647
PspXI	VCTCGAGB	1 cut(s)	2130
PstI	CTGCAG	8 cut(s)	22, 347, 367, 514, 811, 1120, 1560, 2307
PsuI	RGATCY	6 cut(s)	44, 142, 976, 1003, 2494, 2602
PsyI	GACNNNGTC	1 cut(s)	375
PvuII	CAGCTG	5 cut(s)	368, 632, 695, 2116, 2720
RsaI	GTAC	6 cut(s)	5, 500, 709, 1349, 1670, 2759
RsaNI	GTAC	6 cut(s)	4, 499, 708, 1348, 1669, 2758
RseI	CAYNNNNRTG	3 cut(s)	584, 1953, 2415
SacII	CCGCGG	1 cut(s)	95
SapI	GCTCTTC	1 cut(s)	1568
SaqAI	TTAA	5 cut(s)	179, 249, 995, 1479, 2034
Sau96I	GGNCC	8 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119, 2647
SbfI	CCTGCAGG	1 cut(s)	2307
SchI	GAGTC	3 cut(s)	1791, 2142, 2387
ScrFI	CCNGG	5 cut(s)	193, 351, 375, 2123, 2799
SdaI	CCTGCAGG	1 cut(s)	2307
SduI	GDGCHC	4 cut(s)	199, 1255, 1320, 1838
SexAI	ACCWGGT	1 cut(s)	373
SfaNI	GCATC	9 cut(s)	121, 289, 398, 1373, 1750, 1957, 2047, 2704, 2797
Sfr274I	CTCGAG	3 cut(s)	668, 765, 2130
Sfr303I	CCGCGG	1 cut(s)	95
SgrBI	CCGCGG	1 cut(s)	95
SinI	GGWCC	7 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119
SlaI	CTCGAG	3 cut(s)	668, 765, 2130
SmiMI	CAYNNNNRTG	3 cut(s)	584, 1953, 2415
SmlI	CTYRAG	7 cut(s)	668, 765, 1044, 1478, 2130, 2262, 2535
SmoI	CTYRAG	7 cut(s)	668, 765, 1044, 1478, 2130, 2262, 2535
SphI	GCATGC	2 cut(s)	362, 1448
Sse8387I	CCTGCAGG	1 cut(s)	2307
SsiI	CCGC	7 cut(s)	92, 94, 752, 1184, 1484, 2768, 2783
SspI	AATATT	1 cut(s)	1693
SspMI	CTAG	3 cut(s)	456, 1280, 2217
StyD4I	CCNGG	5 cut(s)	191, 349, 373, 2121, 2797
StyI	CCWWGG	1 cut(s)	281
TaaI	ACNGT	7 cut(s)	13, 475, 539, 655, 663, 1342, 1517
TaiI	ACGT	4 cut(s)	1438, 1674, 1740, 1850
TaqI	TCGA	7 cut(s)	224, 291, 669, 766, 2131, 2671, 2787
TaqII	GACCGA	1 cut(s)	105
TatI	WGTACW	3 cut(s)	707, 1347, 2757
TauI	GCSGC	3 cut(s)	94, 1487, 2770
TfiI	GAWTC	5 cut(s)	286, 965, 1700, 2510, 2638
Tru1I	TTAA	5 cut(s)	179, 249, 995, 1479, 2034
Tru9I	TTAA	5 cut(s)	179, 249, 995, 1479, 2034
TscAI	CASTG	6 cut(s)	347, 536, 1522, 1836, 1958, 2080
TseFI	GTSAC	1 cut(s)	1827
Tsp45I	GTSAC	1 cut(s)	1827
TspGWI	ACGGA	2 cut(s)	135, 958
TspRI	CASTG	6 cut(s)	347, 536, 1522, 1836, 1958, 2080
Tth111I	GACNNNGTC	1 cut(s)	375
Vha464I	CTTAAG	1 cut(s)	1478
VpaK11BI	GGWCC	7 cut(s)	117, 371, 479, 1009, 1100, 1654, 2119
VspI	ATTAAT	1 cut(s)	249
XapI	RAATTY	4 cut(s)	732, 1936, 2358, 2460
XbaI	TCTAGA	1 cut(s)	1279
XceI	RCATGY	2 cut(s)	362, 1448
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1389, 2614
XhoI	CTCGAG	3 cut(s)	668, 765, 2130
XmiI	GTMKAC	1 cut(s)	1200
XspI	CTAG	3 cut(s)	456, 1280, 2217
Zsp2I	ATGCAT	2 cut(s)	2146, 2335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.