Rmu_sc0002759.1_g000051

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002759.1
OG0006392
Physical Location & Seq
Forward (+)
257188 .. 260921
3734 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3021 bp
atggctgcttcttccttacgagagttgcttacagaagaagcatatcaacgcaggaacaacaacaacatgttcgtcgccaaaaccaaaaaaccagtgaagtacagagttgctccagatgagtctctggctttgttgcctatacacatctgccacgatcgaaaaagctacgacttctccaagcacaaggctcaaaactctgttatgcgaaaagggtcgtctagaagagtgagttctacttcagagaggtcgaattccaagacggtggtctcggaaagtagttcgagaagaacagagcctgcggcgcttgatgaagttgccactaaagctgtggtttctattctcagcggatatgcgggtcgttatataaaggacgaggagtttagaggagggattgaggacaagtgtagggcttgtttggcgaggaagaaaagagattcggatagtggagtacttgagactttggaatcaggtgttgaaaatgttaacaagttggtggagaatccagttttttcgatgaaagcaatgagaaaatgcattgggaatttgagcagtgttgttgcttctctggatgccaataagtccaagatgaatgcttcgacttgtggtatacccaattcaaatctctctgcttgtgctcagctctacttggcaattgttcacaagcttgagagaaatgacttggtttctgctaagcatttgcttcaagttttctgtgattcaccatttttagcaagaacccatttgcttcctgatctatgggaacatctcttacttccacatcttcttcatctgaagatatggtataccaaggagattgaggttgtttcacactcatttgagaaggagaagagaatcaaatccttaaccaaagtctataatgaccaaatggatttggggactacaaagtctgctcaatactacaaagagtggcttaaatttggggctgaggctcctcctgttgctccagaaatacctctgccttcagtaccaagtagcagatcaagacgacggagagcatccgattctttcgcttcacattcctcattgaacaaaaatttatatcaggctgtgtttggccccacactcgaaaggcggtcagtggaccttgatgatcgaaatggagtttcaattgcttcttgggatgtaaatgaagaggagaagctgtttgaagatgaagctaatgcagacaagtacaacagtctcagttttgttcatagggaagacagtaatggacgaaagtcatcgagccgaagtcatagaaatccaaaaactgagttatggcctgagtctgatcagacaaagaaatcagactattttggattctttagctgccagaatgcacctactgaatgcctagtgaataggaatctcatatttaagagtaattcagttcaacaagaagacaattcccaccttccttcaagcaatttaggcagtgcaatcagtactctttactcgtcggatagtctcagtgattgcgaaattgcagttcgtgcaattaccaaagcttggttggactcacatggtgatcctgtcattgaagccatgttatccgagccacctcttatccagggaatgctggaggtgttgtttgcttccactgatgatgaaattttggaactagtaatatcggttttagctgaatttgtagcaagaaatgagcagaatagaaagataatactgaattttgatccacagcttgaaatcttcatgagacttctaagaagtagtggtctatttttgaaagcagctgttttgctttacctgttgatgccaaaggcaaaacagatgatatcacttgaatgggtggcactagtccttcgagtactcgagtttggagaccagttgcagaccctattcaccgtacgatgcagccctcaagcagcagcgttgtaccttttggaccagcttcttacgggttttgatgaagatcggaacttggagaatgctagacaggtggtttctctaggaggcttaagccttctggtgactcaaattgagaaaggggatactcatgagaggaataatgttgcttccataatttcatgctgtgttcgagctgatggaagctgtcgaaactacttggctgattttctgaacaagccttctcttctcgaactcattgtactcggaaatggaagcaactcaacttgttctgcatttgctctattgattgaaatactctgccttagtagacgaacgaagatcactcaaatcctagaaggactgaaagaaggatgctgtggcttgaacacaatgcaaattttattggtctatctgcagagagcttcaccagaagagcgccccttagttgcagccatattgctacaacttgatcttatgggagatccttttagatgcagtgtatatagagaagaagccatcgaagcaatgataggcgctttagattgtcgaacatgtgacgaaaaagtccaagaacgatcagcgagatctctcttgatgttgggaggctggttttcatacacaggagaggcatcaacagaacattggcttttacaacaagcgggtttcagttattggtcaagggattcatttcacttcaaagaaggttttttacactcaaatgaagacgaagaagcaacaaaaaattggcagaggaaagcagccactgcattgtttagaagcggtagtaagaaattactgggggcccttttggattccatagcaaatggcatcccgagtttagcacgagtgagccttgtgacattgtcctggatgagtagctttctcagtacagttggagatgaacatttgaagtccatggcatgctcaattcttgtgcctcagttgctcaagtcgctgaagtttcgcaaagatgtggaggaaagagtacttgcttcttactcattactgaatcttgtaaaaagttcaggtgatgaatacatccccatgctctcatcagtggacaaagaggttcttagcaaactccagaacctctccttagtgacatggacagctaatgaccttatttcaatcatcacaagcaattatgaggactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1006

Amino Acids

112.6

Weight (kDa)

6.51

Isoelectric Point (pI)

49.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_LIN PF23568 105 - 328 8.1e-89 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_2nd PF23654 474 - 635 1.3e-59 E3 ubiquitin-protein ligase LIN-like, ARM repeat
ARM_LIN_C PF23628 636 - 1000 1.2e-130 Putative E3 ubiquitin-protein ligase LIN, ARM-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 904, 2429
AccB7I CCANNNNNTGG 1 cut(s) 1509
AccI GTMKAC 3 cut(s) 607, 803, 2194
AciI CCGC 6 cut(s) 299, 345, 353, 1093, 2525, 2646
AclWI GGATC 3 cut(s) 1523, 1685, 2342
AcsI RAATTY 8 cut(s) 250, 541, 935, 1054, 1611, 1643, 1684, 2262
AcuI CTGAAG 4 cut(s) 222, 812, 966, 2843
AdeI CACNNNGTG 1 cut(s) 1526
AfiI CCNNNNNNNGG 1 cut(s) 1509
AflII CTTAAG 1 cut(s) 1975
AflIII ACRYGT 2 cut(s) 66, 2417
AhlI ACTAGT 2 cut(s) 1621, 1813
AjnI CCWGG 2 cut(s) 1569, 2732
Alw21I GWGCWC 1 cut(s) 637
Alw26I GTCTC 7 cut(s) 126, 271, 449, 1205, 1472, 1708, 1833
AlwI GGATC 3 cut(s) 1523, 1685, 2342
AlwNI CAGNNNCTG 2 cut(s) 296, 2630
Ama87I CYCGRG 2 cut(s) 1829, 2698
AoxI GGCC 3 cut(s) 1075, 1280, 2667
ApaI GGGCCC 1 cut(s) 2671
ApeKI GCWGC 8 cut(s) 5, 1329, 1748, 1872, 1883, 1886, 2315, 2624
ApoI RAATTY 8 cut(s) 250, 541, 935, 1054, 1611, 1643, 1684, 2262
AspLEI GCGC 3 cut(s) 304, 2304, 2402
AspS9I GGNCC 5 cut(s) 1076, 1102, 1903, 2667, 2668
AsuHPI GGTGA 6 cut(s) 711, 1538, 1852, 1999, 2283, 2906
AvaI CYCGRG 2 cut(s) 1829, 2698
AvaII GGWCC 2 cut(s) 1102, 1903
BaeGI GKGCMC 1 cut(s) 2671
BanII GRGCYC 1 cut(s) 2671
BarI GAAGNNNNNNTAC 2 cut(s) 2559, 2591
BauI CACGAG 1 cut(s) 2709
BbsI GAAGAC 3 cut(s) 1227, 1407, 2595
Bbv12I GWGCWC 1 cut(s) 637
BbvCI CCTCAGC 1 cut(s) 945
BbvI GCAGC 7 cut(s) 1316, 1760, 1884, 1895, 1898, 2327, 2636
BccI CCATC 2 cut(s) 2057, 2390
BciT130I CCWGG 2 cut(s) 1571, 2734
BciVI GTATCC 1 cut(s) 2002
BclI TGATCA 1 cut(s) 1291
BcoDI GTCTC 7 cut(s) 126, 271, 449, 1205, 1472, 1708, 1833
BcuI ACTAGT 2 cut(s) 1621, 1813
BfaI CTAG 8 cut(s) 219, 1355, 1622, 1814, 1950, 1967, 2219, 3019
BfmI CTRYAG 1 cut(s) 2279
BfoI RGCGCY 3 cut(s) 305, 2305, 2403
BfrI CTTAAG 1 cut(s) 1975
BfuI GTATCC 1 cut(s) 2002
BglII AGATCT 1 cut(s) 2450
BisI GCNGC 9 cut(s) 6, 300, 1330, 1749, 1873, 1884, 1887, 2316, 2625
BlpI GCTNAGC 2 cut(s) 636, 690
BlsI GCNGC 9 cut(s) 7, 301, 1331, 1750, 1874, 1885, 1888, 2317, 2626
BmcAI AGTACT 4 cut(s) 450, 1447, 1827, 2853
Bme1390I CCNGG 2 cut(s) 1571, 2734
Bme18I GGWCC 2 cut(s) 1102, 1903
BmeT110I CYCGRG 2 cut(s) 1829, 2698
BmgT120I GGNCC 5 cut(s) 1076, 1102, 1903, 2667, 2668
BmiI GGNNCC 4 cut(s) 951, 1078, 2668, 2669
BmrFI CCNGG 2 cut(s) 1571, 2734
BmrI ACTGGG 1 cut(s) 2672
BmsI GCATC 8 cut(s) 559, 1025, 1761, 1859, 2228, 2348, 2504, 2703
BmuI ACTGGG 1 cut(s) 2672
BoxI GACNNNNGTC 2 cut(s) 263, 1237
BpiI GAAGAC 3 cut(s) 1227, 1407, 2595
BpmI CTGGAG 4 cut(s) 96, 948, 1601, 2933
Bpu10I CCTNAGC 1 cut(s) 945
Bpu1102I GCTNAGC 2 cut(s) 636, 690
BpuEI CTTGAG 4 cut(s) 473, 686, 1863, 2798
BsaBI GATNNNNATC 1 cut(s) 1929
BsaI GGTCTC 2 cut(s) 271, 1833
BsaJI CCNNGG 3 cut(s) 807, 1570, 2781
BsaXI ACNNNNNCTCC 6 cut(s) 158, 188, 1148, 1178, 1574, 1604
Bsc4I CCNNNNNNNGG 1 cut(s) 1509
Bse1I ACTGG 4 cut(s) 92, 503, 1843, 2667
Bse3DI GCAATG 2 cut(s) 528, 2397
Bse8I GATNNNNATC 1 cut(s) 1929
BseBI CCWGG 2 cut(s) 1571, 2734
BseDI CCNNGG 3 cut(s) 807, 1570, 2781
BseGI GGATG 7 cut(s) 574, 1016, 1147, 2243, 2694, 2742, 2904
BseJI GATNNNNATC 1 cut(s) 1929
BseLI CCNNNNNNNGG 1 cut(s) 1509
BseMI GCAATG 2 cut(s) 528, 2397
BseMII CTCAG 9 cut(s) 355, 650, 936, 1216, 1263, 1275, 1483, 2764, 2819
BseNI ACTGG 4 cut(s) 92, 503, 1843, 2667
BseRI GAGGAG 4 cut(s) 389, 399, 942, 1169
BseSI GKGCMC 1 cut(s) 2671
BseXI GCAGC 7 cut(s) 1316, 1760, 1884, 1895, 1898, 2327, 2636
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 3 cut(s) 1077, 1282, 2669
BsiEI CGRYCG 1 cut(s) 157
BsiHKAI GWGCWC 1 cut(s) 637
BsiHKCI CYCGRG 2 cut(s) 1829, 2698
BsiWI CGTACG 1 cut(s) 1864
BslFI GGGAC 1 cut(s) 910
BslI CCNNNNNNNGG 1 cut(s) 1509
BsmAI GTCTC 7 cut(s) 126, 271, 449, 1205, 1472, 1708, 1833
BsmFI GGGAC 1 cut(s) 910
BsmI GAATGC 5 cut(s) 595, 1342, 1355, 1581, 1951
BsnI GGCC 3 cut(s) 1077, 1282, 2669
Bso31I GGTCTC 2 cut(s) 271, 1833
BsoBI CYCGRG 2 cut(s) 1829, 2698
Bsp120I GGGCCC 1 cut(s) 2667
Bsp1286I GDGCHC 2 cut(s) 637, 2671
Bsp1720I GCTNAGC 2 cut(s) 636, 690
Bsp19I CCATGG 1 cut(s) 2781
BspACI CCGC 6 cut(s) 299, 345, 353, 1093, 2525, 2646
BspANI GGCC 3 cut(s) 1077, 1282, 2669
BspCNI CTCAG 9 cut(s) 354, 649, 937, 1215, 1264, 1276, 1482, 2763, 2818
BspHI TCATGA 2 cut(s) 1710, 2014
BspLI GGNNCC 4 cut(s) 951, 1078, 2668, 2669
BspMAI CTGCAG 1 cut(s) 2283
BspPI GGATC 3 cut(s) 1523, 1685, 2342
BspQI GCTCTTC 1 cut(s) 2292
BspTI CTTAAG 1 cut(s) 1975
BspTNI GGTCTC 2 cut(s) 271, 1833
BsrDI GCAATG 2 cut(s) 528, 2397
BsrI ACTGG 4 cut(s) 92, 503, 1843, 2667
BssECI CCNNGG 3 cut(s) 807, 1570, 2781
BssNAI GTATAC 2 cut(s) 608, 804
BssSI CACGAG 1 cut(s) 2709
BssT1I CCWWGG 2 cut(s) 807, 2781
Bst1107I GTATAC 2 cut(s) 608, 804
Bst2BI CACGAG 1 cut(s) 2709
Bst2UI CCWGG 2 cut(s) 1571, 2734
Bst4CI ACNGT 5 cut(s) 262, 1199, 1226, 1864, 2758
Bst6I CTCTTC 5 cut(s) 217, 842, 1146, 2115, 2292
BstAFI CTTAAG 1 cut(s) 1975
BstAPI GCANNNNNTGC 2 cut(s) 1493, 2630
BstC8I GCNNGC 2 cut(s) 297, 2788
BstDSI CCRYGG 1 cut(s) 2781
BstF5I GGATG 7 cut(s) 574, 1016, 1147, 2243, 2694, 2742, 2904
BstH2I RGCGCY 3 cut(s) 305, 2305, 2403
BstHHI GCGC 3 cut(s) 304, 2304, 2402
BstMAI GTCTC 7 cut(s) 126, 271, 449, 1205, 1472, 1708, 1833
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 9 cut(s) 301, 323, 416, 1431, 1493, 2387, 2630, 2809, 2818
BstNI CCWGG 2 cut(s) 1571, 2734
BstNSI RCATGY 3 cut(s) 70, 2421, 2790
BstPAI GACNNNNGTC 2 cut(s) 263, 1237
BstSCI CCNGG 2 cut(s) 1569, 2732
BstSFI CTRYAG 1 cut(s) 2279
BstSLI GKGCMC 1 cut(s) 2671
BstV1I GCAGC 7 cut(s) 1316, 1760, 1884, 1895, 1898, 2327, 2636
BstV2I GAAGAC 3 cut(s) 1227, 1407, 2595
BstX2I RGATCY 2 cut(s) 2347, 2450
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 2 cut(s) 2347, 2450
BstZ17I GTATAC 2 cut(s) 608, 804
BsuI GTATCC 1 cut(s) 2002
BsuRI GGCC 3 cut(s) 1077, 1282, 2669
BtgI CCRYGG 1 cut(s) 2781
BtsCI GGATG 7 cut(s) 574, 1016, 1147, 2243, 2694, 2742, 2904
BtsI GCAGTG 4 cut(s) 556, 1441, 2368, 2628
BtsIMutI CAGTG 9 cut(s) 99, 556, 1104, 1441, 1477, 1599, 2368, 2628, 2928
Cac8I GCNNGC 2 cut(s) 297, 2788
CaiI CAGNNNCTG 2 cut(s) 296, 2630
CciI TCATGA 2 cut(s) 1710, 2014
CfoI GCGC 3 cut(s) 304, 2304, 2402
Cfr13I GGNCC 5 cut(s) 1076, 1102, 1903, 2667, 2668
DraIII CACNNNGTG 1 cut(s) 1526
DrdI GACNNNNNNGTC 2 cut(s) 904, 2429
DseDI GACNNNNNNGTC 2 cut(s) 904, 2429
Eam1104I CTCTTC 5 cut(s) 217, 842, 1146, 2115, 2292
EarI CTCTTC 5 cut(s) 217, 842, 1146, 2115, 2292
Eco130I CCWWGG 2 cut(s) 807, 2781
Eco24I GRGCYC 1 cut(s) 2671
Eco31I GGTCTC 2 cut(s) 271, 1833
Eco32I GATATC 1 cut(s) 1794
Eco47I GGWCC 2 cut(s) 1102, 1903
Eco57I CTGAAG 4 cut(s) 222, 812, 966, 2843
Eco88I CYCGRG 2 cut(s) 1829, 2698
EcoO109I RGGNCCY 2 cut(s) 2667, 2668
EcoRI GAATTC 1 cut(s) 250
EcoRII CCWGG 2 cut(s) 1569, 2732
EcoRV GATATC 1 cut(s) 1794
EcoT14I CCWWGG 2 cut(s) 807, 2781
EcoT22I ATGCAT 1 cut(s) 536
EcoT38I GRGCYC 1 cut(s) 2671
ErhI CCWWGG 2 cut(s) 807, 2781
FalI AAGNNNNNCTT 4 cut(s) 915, 947, 2922, 2954
FaqI GGGAC 1 cut(s) 910
FauI CCCGC 2 cut(s) 346, 2518
FbaI TGATCA 1 cut(s) 1291
FblI GTMKAC 3 cut(s) 607, 803, 2194
Fnu4HI GCNGC 9 cut(s) 6, 300, 1330, 1749, 1873, 1884, 1887, 2316, 2625
FokI GGATG 7 cut(s) 581, 1003, 1154, 2250, 2681, 2749, 2891
FriOI GRGCYC 1 cut(s) 2671
Fsp4HI GCNGC 9 cut(s) 6, 300, 1330, 1749, 1873, 1884, 1887, 2316, 2625
FspBI CTAG 8 cut(s) 219, 1355, 1622, 1814, 1950, 1967, 2219, 3019
GlaI GCGC 3 cut(s) 303, 2303, 2401
GluI GCNGC 9 cut(s) 6, 300, 1330, 1749, 1873, 1884, 1887, 2316, 2625
GsuI CTGGAG 4 cut(s) 96, 948, 1601, 2933
HaeII RGCGCY 3 cut(s) 305, 2305, 2403
HaeIII GGCC 3 cut(s) 1077, 1282, 2669
HhaI GCGC 3 cut(s) 304, 2304, 2402
Hin6I GCGC 3 cut(s) 302, 2302, 2400
HinP1I GCGC 3 cut(s) 302, 2302, 2400
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HindIII AAGCTT 2 cut(s) 662, 1506
HpaI GTTAAC 1 cut(s) 484
HphI GGTGA 6 cut(s) 711, 1538, 1852, 1999, 2283, 2906
Hpy166II GTNNAC 7 cut(s) 484, 608, 658, 804, 1102, 2195, 2926
Hpy8I GTNNAC 7 cut(s) 484, 608, 658, 804, 1102, 2195, 2926
Hpy99I CGWCG 3 cut(s) 77, 1011, 1462
HpyCH4III ACNGT 5 cut(s) 262, 1199, 1226, 1864, 2758
HpyF10VI GCNNNNNNNGC 9 cut(s) 301, 323, 416, 1431, 1493, 2387, 2630, 2809, 2818
HspAI GCGC 3 cut(s) 302, 2302, 2400
Ksp22I TGATCA 1 cut(s) 1291
KspAI GTTAAC 1 cut(s) 484
LguI GCTCTTC 1 cut(s) 2292
LmnI GCTCC 3 cut(s) 115, 955, 967
Lsp1109I GCAGC 7 cut(s) 1316, 1760, 1884, 1895, 1898, 2327, 2636
LweI GCATC 8 cut(s) 559, 1025, 1761, 1859, 2228, 2348, 2504, 2703
MaeI CTAG 8 cut(s) 219, 1355, 1622, 1814, 1950, 1967, 2219, 3019
MaeIII GTNAC 4 cut(s) 1987, 2420, 2722, 2965
MfeI CAATTG 2 cut(s) 651, 1128
MflI RGATCY 2 cut(s) 2347, 2450
MhlI GDGCHC 2 cut(s) 637, 2671
MlyI GAGTC 4 cut(s) 128, 1295, 1511, 1984
MmeI TCCRAC 3 cut(s) 1440, 1494, 2740
Mph1103I ATGCAT 1 cut(s) 536
MseI TTAA 5 cut(s) 483, 863, 933, 1377, 1976
MslI CAYNNNNRTG 3 cut(s) 1801, 2583, 2909
MspA1I CMGCKG 2 cut(s) 345, 1751
MspCI CTTAAG 1 cut(s) 1975
MspR9I CCNGG 2 cut(s) 1571, 2734
MunI CAATTG 2 cut(s) 651, 1128
Mva1269I GAATGC 5 cut(s) 595, 1342, 1355, 1581, 1951
MvaI CCWGG 2 cut(s) 1571, 2734
MwoI GCNNNNNNNGC 9 cut(s) 301, 323, 416, 1431, 1493, 2387, 2630, 2809, 2818
NcoI CCATGG 1 cut(s) 2781
NlaIV GGNNCC 4 cut(s) 951, 1078, 2668, 2669
NmuCI GTSAC 4 cut(s) 1987, 2420, 2722, 2965
NsiI ATGCAT 1 cut(s) 536
NspI RCATGY 3 cut(s) 70, 2421, 2790
PaeI GCATGC 1 cut(s) 2790
PaeR7I CTCGAG 1 cut(s) 1829
PagI TCATGA 2 cut(s) 1710, 2014
PciI ACATGT 2 cut(s) 66, 2417
PciSI GCTCTTC 1 cut(s) 2292
PctI GAATGC 5 cut(s) 595, 1342, 1355, 1581, 1951
Pfl23II CGTACG 1 cut(s) 1864
PflFI GACNNNGTC 1 cut(s) 2728
PflMI CCANNNNNTGG 1 cut(s) 1509
PfoI TCCNGGA 1 cut(s) 2732
PkrI GCNGC 9 cut(s) 7, 301, 1331, 1750, 1874, 1885, 1888, 2317, 2626
Ple19I CGATCG 1 cut(s) 157
PleI GAGTC 4 cut(s) 127, 1294, 1511, 1984
PpsI GAGTC 4 cut(s) 127, 1294, 1511, 1984
PscI ACATGT 2 cut(s) 66, 2417
PshAI GACNNNNGTC 2 cut(s) 263, 1237
Psp6I CCWGG 2 cut(s) 1569, 2732
PspGI CCWGG 2 cut(s) 1569, 2732
PspLI CGTACG 1 cut(s) 1864
PspN4I GGNNCC 4 cut(s) 951, 1078, 2668, 2669
PspOMI GGGCCC 1 cut(s) 2667
PspPI GGNCC 5 cut(s) 1076, 1102, 1903, 2667, 2668
PspXI VCTCGAGB 1 cut(s) 1829
PsrI GAACNNNNNNTAC 4 cut(s) 753, 785, 2109, 2141
PstI CTGCAG 1 cut(s) 2283
PstNI CAGNNNCTG 2 cut(s) 296, 2630
PsuI RGATCY 2 cut(s) 2347, 2450
PsyI GACNNNGTC 1 cut(s) 2728
PvuI CGATCG 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 1751
RseI CAYNNNNRTG 3 cut(s) 1801, 2583, 2909
SapI GCTCTTC 1 cut(s) 2292
SaqAI TTAA 5 cut(s) 483, 863, 933, 1377, 1976
SatI GCNGC 9 cut(s) 6, 300, 1330, 1749, 1873, 1884, 1887, 2316, 2625
Sau96I GGNCC 5 cut(s) 1076, 1102, 1903, 2667, 2668
ScaI AGTACT 4 cut(s) 450, 1447, 1827, 2853
SchI GAGTC 4 cut(s) 128, 1295, 1511, 1984
ScrFI CCNGG 2 cut(s) 1571, 2734
SduI GDGCHC 2 cut(s) 637, 2671
SfaNI GCATC 8 cut(s) 559, 1025, 1761, 1859, 2228, 2348, 2504, 2703
SfcI CTRYAG 1 cut(s) 2279
Sfr274I CTCGAG 1 cut(s) 1829
SinI GGWCC 2 cut(s) 1102, 1903
SlaI CTCGAG 1 cut(s) 1829
SmiMI CAYNNNNRTG 3 cut(s) 1801, 2583, 2909
SmlI CTYRAG 6 cut(s) 452, 665, 1829, 1878, 1975, 2813
SmoI CTYRAG 6 cut(s) 452, 665, 1829, 1878, 1975, 2813
SpeI ACTAGT 2 cut(s) 1621, 1813
SphI GCATGC 1 cut(s) 2790
SsiI CCGC 6 cut(s) 299, 345, 353, 1093, 2525, 2646
SspMI CTAG 8 cut(s) 219, 1355, 1622, 1814, 1950, 1967, 2219, 3019
StyD4I CCNGG 2 cut(s) 1569, 2732
StyI CCWWGG 2 cut(s) 807, 2781
TaaI ACNGT 5 cut(s) 262, 1199, 1226, 1864, 2758
TatI WGTACW 8 cut(s) 99, 448, 1191, 1445, 1825, 2125, 2753, 2851
TauI GCSGC 1 cut(s) 302
Tru1I TTAA 5 cut(s) 483, 863, 933, 1377, 1976
Tru9I TTAA 5 cut(s) 483, 863, 933, 1377, 1976
TscAI CASTG 9 cut(s) 99, 556, 1104, 1441, 1477, 1606, 2368, 2635, 2928
TseFI GTSAC 4 cut(s) 1987, 2420, 2722, 2965
TseI GCWGC 8 cut(s) 5, 1329, 1748, 1872, 1883, 1886, 2315, 2624
Tsp45I GTSAC 4 cut(s) 1987, 2420, 2722, 2965
TspGWI ACGGA 1 cut(s) 1024
TspRI CASTG 9 cut(s) 99, 556, 1104, 1441, 1477, 1606, 2368, 2635, 2928
Tth111I GACNNNGTC 1 cut(s) 2728
Van91I CCANNNNNTGG 1 cut(s) 1509
Vha464I CTTAAG 1 cut(s) 1975
VpaK11BI GGWCC 2 cut(s) 1102, 1903
XapI RAATTY 8 cut(s) 250, 541, 935, 1054, 1611, 1643, 1684, 2262
XbaI TCTAGA 1 cut(s) 218
XceI RCATGY 3 cut(s) 70, 2421, 2790
XcmI CCANNNNNNNNNTGG 2 cut(s) 325, 1510
XhoI CTCGAG 1 cut(s) 1829
XmiI GTMKAC 3 cut(s) 607, 803, 2194
XspI CTAG 8 cut(s) 219, 1355, 1622, 1814, 1950, 1967, 2219, 3019
ZrmI AGTACT 4 cut(s) 450, 1447, 1827, 2853
Zsp2I ATGCAT 1 cut(s) 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.