Rmu_sc0002845.1_g000025

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002845.1
OG0005060
Physical Location & Seq
Reverse (-)
103134 .. 117425
14292 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1908 bp
atgatggcgaacttgaattcgaaattagggttgttccgattagggacacggtggctgagcagtactgggagtgggccagggaagagggtcgcggcggtttggggcaatggagactacgggaggctcggattagggagcttggactctcactggagccctacccctctgctctgctctgcatttcaggaccaaagccttgaagccgttgcttgcggcggagctcacactctgttcttgacccaagctggccgggttttcgccaccggcctaaatgatttcggacagcttggggcctccactgatgtgccttatgctactgagccggtggaggtatcgggaatcaacaagccagttgtgcaaatttccgctggatattatcattcttgtgctgttacagaagatggagagttatacatgtgggggaagaactcatatgggcagcttggccttggaaagagaggatcaaaaacagttcctacaccagcaaaagttgaatgcttggctggaatcaccattaggatggtagctttgggatcagagcactcagtggctgttactgatggaggtgagtccttaagttggggaggaggttctggaagacttggtcatggccctgaatcagggattttaggaattttcaaaagtaccggtgaatatacaccaaggctcatcaagaaacttgaggggaccaaagtcaaaaaagttgctgctggattgctgcattcagcatgcgttgacgaaaatggatctgtattcgtatttggtgaaagagcagtagatagaatggggagtttaaaggggaagaatggaactgcaccgtccatgatcagcagactgccctgctcagaagaagtttcatgcggtggctatcacacatgcgtcataacaagtggtggagaactctacagttggggttcaaatgaaaatggttgccttggtattggtactactgatgtacttcatctgccggaaagagttcaaggtccattcttgaaatctgcagttgtcaaggtatcttgtggttggaagcatacagcagcaatttctgaaggcaatatcttcacatggggttggggaggttcacatggaacattttctgaagaagggcattcttctggaggacaactggtatcttgtggttggaagcatacagcagcaatttctgaaggcaatatcttcacatggggttggggaggttcacatggaacattttctgaagaagggcattcttctggaggacaactgggtcagggaactgatgttgactacataaaacctatgagggtcaagtttggggagaatttgaaagctttacagatatcatgtgggttcaatcacactggaaccgtttttctgcaatggcatggtcctcaagctcagttggtgattatggaacctgacttgtgcaaacaggtactgaataacaaagagagagcctatgtgaaaagagaacccttcccctatgtaaggaagctagttggaggtagcgttggaataacagaggattctgaaaaatgggcaaaactgagaaagctgtccaactatgccttccatggagagagcttaaaagcaagtaattctcacatataccgacatcagccttcatctatcaaaagatcggtggtgtcctctgtctctttcaggtcgtctgttcccttcaaggttgacttcacctgtctacatcagcttcacattcaagacccgcctcatcttccagatcgcctaggtcacctccatatcttcggatcgaattcgtcagttcccggagtcgctgaagagcacccagatcgtcggtccatcttcatcttcgggtctgtttttctccgtctccaggcaccaatctcttccggcactggtctcgatccagtcccattccggccacctggtccatctcccaccgtgccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
RCC1

Protein Analysis

635

Amino Acids

67.74

Weight (kDa)

8.53

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 32 - 362 7.5e-79 RCC1-like domain
RCC1 PF00415 34 - 79 9e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 68 - 95 1.6e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 83 - 131 5.6e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 118 - 147 7.7e-15 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 134 - 185 1.3e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 192 - 245 2.9e-06 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 207 - 447 2.7e-43 RCC1-like domain
RCC1_2 PF13540 285 - 311 1.7e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 299 - 348 2.1e-14 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 409 - 448 1.9e-06 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1245
AccB1I GGYRCC 1 cut(s) 1834
AccI GTMKAC 1 cut(s) 1678
AccII CGCG 1 cut(s) 92
AciI CCGC 7 cut(s) 92, 95, 213, 216, 366, 861, 1703
AclWI GGATC 5 cut(s) 469, 541, 754, 1753, 1856
AcoI YGGCCR 2 cut(s) 247, 1877
AcsI RAATTY 5 cut(s) 16, 360, 633, 1300, 1750
AcuI CTGAAG 5 cut(s) 1068, 1119, 1185, 1236, 1794
AdeI CACNNNGTG 1 cut(s) 547
AfaI GTAC 5 cut(s) 64, 646, 946, 957, 1416
AfiI CCNNNNNNNGG 4 cut(s) 579, 620, 1467, 1831
AflII CTTAAG 1 cut(s) 574
AflIII ACRYGT 1 cut(s) 414
AgeI ACCGGT 1 cut(s) 647
AjnI CCWGG 3 cut(s) 76, 1830, 1882
AjuI GAANNNNNNNTTGG 2 cut(s) 1532, 1564
AleI CACNNNNGTG 1 cut(s) 302
Alw21I GWGCWC 3 cut(s) 223, 543, 1782
Alw26I GTCTC 4 cut(s) 105, 1639, 1832, 1862
AlwI GGATC 5 cut(s) 469, 541, 754, 1753, 1856
AlwNI CAGNNNCTG 2 cut(s) 551, 1417
AoxI GGCC 7 cut(s) 74, 247, 265, 291, 445, 610, 1877
ApeKI GCWGC 5 cut(s) 439, 707, 718, 1037, 1154
ApoI RAATTY 5 cut(s) 16, 360, 633, 1300, 1750
AsiGI ACCGGT 1 cut(s) 647
Asp700I GAANNNNTTC 3 cut(s) 975, 1093, 1210
AspA2I CCTAGG 1 cut(s) 1723
AspS9I GGNCC 9 cut(s) 74, 187, 291, 611, 687, 983, 1367, 1794, 1886
AsuC2I CCSGG 2 cut(s) 251, 1764
AsuHPI GGTGA 7 cut(s) 502, 578, 662, 776, 1396, 1663, 1721
AsuII TTCGAA 1 cut(s) 20
AvaII GGWCC 6 cut(s) 187, 687, 983, 1367, 1794, 1886
AvrII CCTAGG 1 cut(s) 1723
BanI GGYRCC 1 cut(s) 1834
BanII GRGCYC 2 cut(s) 158, 223
BbsI GAAGAC 1 cut(s) 604
Bbv12I GWGCWC 3 cut(s) 223, 543, 1782
BbvI GCAGC 5 cut(s) 451, 694, 705, 1049, 1166
BccI CCATC 5 cut(s) 395, 514, 554, 1805, 1897
BceAI ACGGC 1 cut(s) 188
BcgI CGANNNNNNTGC 4 cut(s) 1769, 1803, 1840, 1874
BciT130I CCWGG 3 cut(s) 78, 1832, 1884
BclI TGATCA 1 cut(s) 825
BcnI CCSGG 2 cut(s) 251, 1764
BcoDI GTCTC 4 cut(s) 105, 1639, 1832, 1862
BfaI CTAG 2 cut(s) 1475, 1724
BfmI CTRYAG 2 cut(s) 904, 999
BfrI CTTAAG 1 cut(s) 574
BisI GCNGC 7 cut(s) 93, 214, 440, 708, 719, 1038, 1155
BlnI CCTAGG 1 cut(s) 1723
BlpI GCTNAGC 1 cut(s) 56
BlsI GCNGC 7 cut(s) 94, 215, 441, 709, 720, 1039, 1156
BmcAI AGTACT 1 cut(s) 64
Bme1390I CCNGG 5 cut(s) 78, 251, 1764, 1832, 1884
Bme18I GGWCC 6 cut(s) 187, 687, 983, 1367, 1794, 1886
BmgT120I GGNCC 9 cut(s) 74, 187, 291, 611, 687, 983, 1367, 1794, 1886
BmiI GGNNCC 6 cut(s) 155, 292, 688, 1345, 1395, 1836
BmrFI CCNGG 5 cut(s) 78, 251, 1764, 1832, 1884
BmrI ACTGGG 2 cut(s) 75, 1253
BmuI ACTGGG 2 cut(s) 75, 1253
BoxI GACNNNNGTC 1 cut(s) 692
BpiI GAAGAC 1 cut(s) 604
BpmI CTGGAG 4 cut(s) 172, 1137, 1254, 1814
Bpu1102I GCTNAGC 1 cut(s) 56
Bpu14I TTCGAA 1 cut(s) 20
BpuEI CTTGAG 2 cut(s) 701, 1356
BpuMI CCSGG 2 cut(s) 251, 1764
BsaI GGTCTC 1 cut(s) 1862
BsaJI CCNNGG 6 cut(s) 77, 448, 662, 934, 1552, 1723
BsaWI WCCGGW 1 cut(s) 647
BsaXI ACNNNNNCTCC 2 cut(s) 1473, 1503
Bsc4I CCNNNNNNNGG 4 cut(s) 579, 620, 1467, 1831
Bse118I RCCGGY 3 cut(s) 263, 322, 647
Bse1I ACTGG 8 cut(s) 70, 155, 350, 1131, 1248, 1345, 1858, 1865
Bse3DI GCAATG 2 cut(s) 112, 1364
BseBI CCWGG 3 cut(s) 78, 1832, 1884
BseDI CCNNGG 6 cut(s) 77, 448, 662, 934, 1552, 1723
BseGI GGATG 1 cut(s) 525
BseLI CCNNNNNNNGG 4 cut(s) 579, 620, 1467, 1831
BseMI GCAATG 2 cut(s) 112, 1364
BseMII CTCAG 6 cut(s) 47, 309, 558, 858, 1391, 1517
BseNI ACTGG 8 cut(s) 70, 155, 350, 1131, 1248, 1345, 1858, 1865
BseRI GAGGAG 1 cut(s) 600
BseXI GCAGC 5 cut(s) 451, 694, 705, 1049, 1166
BsgI GTGCAG 1 cut(s) 798
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 7 cut(s) 76, 249, 267, 293, 447, 612, 1879
BshNI GGYRCC 1 cut(s) 1834
BshTI ACCGGT 1 cut(s) 647
BsiHKAI GWGCWC 3 cut(s) 223, 543, 1782
BsiSI CCGG 8 cut(s) 250, 264, 323, 648, 968, 1764, 1848, 1876
BslFI GGGAC 3 cut(s) 58, 700, 1853
BslI CCNNNNNNNGG 4 cut(s) 579, 620, 1467, 1831
BsmAI GTCTC 4 cut(s) 105, 1639, 1832, 1862
BsmBI CGTCTC 1 cut(s) 1832
BsmFI GGGAC 3 cut(s) 58, 700, 1853
BsmI GAATGC 4 cut(s) 500, 721, 1108, 1225
BsnI GGCC 7 cut(s) 76, 249, 267, 293, 447, 612, 1879
Bso31I GGTCTC 1 cut(s) 1862
Bsp119I TTCGAA 1 cut(s) 20
Bsp1286I GDGCHC 4 cut(s) 158, 223, 543, 1782
Bsp143I GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
Bsp1720I GCTNAGC 1 cut(s) 56
Bsp19I CCATGG 1 cut(s) 1552
BspACI CCGC 7 cut(s) 92, 95, 213, 216, 366, 861, 1703
BspANI GGCC 7 cut(s) 76, 249, 267, 293, 447, 612, 1879
BspCNI CTCAG 6 cut(s) 48, 310, 557, 857, 1390, 1518
BspFNI CGCG 1 cut(s) 92
BspLI GGNNCC 6 cut(s) 155, 292, 688, 1345, 1395, 1836
BspMAI CTGCAG 1 cut(s) 1003
BspPI GGATC 5 cut(s) 469, 541, 754, 1753, 1856
BspQI GCTCTTC 1 cut(s) 1770
BspT104I TTCGAA 1 cut(s) 20
BspT107I GGYRCC 1 cut(s) 1834
BspTI CTTAAG 1 cut(s) 574
BspTNI GGTCTC 1 cut(s) 1862
BsrDI GCAATG 2 cut(s) 112, 1364
BsrFI RCCGGY 3 cut(s) 263, 322, 647
BsrI ACTGG 8 cut(s) 70, 155, 350, 1131, 1248, 1345, 1858, 1865
BssAI RCCGGY 3 cut(s) 263, 322, 647
BssECI CCNNGG 6 cut(s) 77, 448, 662, 934, 1552, 1723
BssMI GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
BssT1I CCWWGG 5 cut(s) 448, 662, 934, 1552, 1723
Bst2UI CCWGG 3 cut(s) 78, 1832, 1884
Bst4CI ACNGT 6 cut(s) 51, 472, 819, 908, 1348, 1900
Bst6I CTCTTC 3 cut(s) 77, 1770, 1849
BstAFI CTTAAG 1 cut(s) 574
BstBI TTCGAA 1 cut(s) 20
BstC8I GCNNGC 3 cut(s) 211, 247, 730
BstDEI CTNAG 7 cut(s) 56, 318, 544, 844, 1377, 1526, 1905
BstDSI CCRYGG 1 cut(s) 1552
BstEII GGTNACC 1 cut(s) 1727
BstENI CCTNNNNNAGG 2 cut(s) 618, 1465
BstF5I GGATG 1 cut(s) 525
BstFNI CGCG 1 cut(s) 92
BstKTI GATC 9 cut(s) 464, 536, 749, 828, 1619, 1720, 1748, 1789, 1864
BstMAI GTCTC 4 cut(s) 105, 1639, 1832, 1862
BstMBI GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
BstMWI GCNNNNNNNGC 1 cut(s) 355
BstNI CCWGG 3 cut(s) 78, 1832, 1884
BstNSI RCATGY 3 cut(s) 418, 732, 879
BstPAI GACNNNNGTC 1 cut(s) 692
BstPI GGTNACC 1 cut(s) 1727
BstSCI CCNGG 5 cut(s) 76, 249, 1762, 1830, 1882
BstSFI CTRYAG 2 cut(s) 904, 999
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 5 cut(s) 451, 694, 705, 1049, 1166
BstV2I GAAGAC 1 cut(s) 604
BstX2I RGATCY 1 cut(s) 746
BstXI CCANNNNNNTGG 1 cut(s) 520
BstYI RGATCY 1 cut(s) 746
BsuRI GGCC 7 cut(s) 76, 249, 267, 293, 447, 612, 1879
BtgI CCRYGG 1 cut(s) 1552
BtsCI GGATG 1 cut(s) 525
BtsIMutI CAGTG 5 cut(s) 148, 297, 552, 1338, 1851
Cac8I GCNNGC 3 cut(s) 211, 247, 730
CaiI CAGNNNCTG 2 cut(s) 551, 1417
Cfr10I RCCGGY 3 cut(s) 263, 322, 647
Cfr13I GGNCC 9 cut(s) 74, 187, 291, 611, 687, 983, 1367, 1794, 1886
CseI GACGC 1 cut(s) 868
CsiI ACCWGGT 1 cut(s) 1882
Csp6I GTAC 5 cut(s) 63, 645, 945, 956, 1415
CspAI ACCGGT 1 cut(s) 647
CviQI GTAC 5 cut(s) 63, 645, 945, 956, 1415
DdeI CTNAG 7 cut(s) 56, 318, 544, 844, 1377, 1526, 1905
DpnI GATC 9 cut(s) 463, 535, 748, 827, 1618, 1719, 1747, 1788, 1863
DpnII GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
DraI TTTAAA 1 cut(s) 795
DraIII CACNNNGTG 1 cut(s) 547
DrdI GACNNNNNNGTC 1 cut(s) 1245
DseDI GACNNNNNNGTC 1 cut(s) 1245
EaeI YGGCCR 2 cut(s) 247, 1877
Eam1104I CTCTTC 3 cut(s) 77, 1770, 1849
EarI CTCTTC 3 cut(s) 77, 1770, 1849
EciI GGCGGA 1 cut(s) 231
Ecl136II GAGCTC 1 cut(s) 221
Eco130I CCWWGG 5 cut(s) 448, 662, 934, 1552, 1723
Eco24I GRGCYC 2 cut(s) 158, 223
Eco31I GGTCTC 1 cut(s) 1862
Eco32I GATATC 1 cut(s) 1320
Eco47I GGWCC 6 cut(s) 187, 687, 983, 1367, 1794, 1886
Eco53kI GAGCTC 1 cut(s) 221
Eco57I CTGAAG 5 cut(s) 1068, 1119, 1185, 1236, 1794
Eco91I GGTNACC 1 cut(s) 1727
EcoICRI GAGCTC 1 cut(s) 221
EcoNI CCTNNNNNAGG 2 cut(s) 618, 1465
EcoO109I RGGNCCY 1 cut(s) 291
EcoO65I GGTNACC 1 cut(s) 1727
EcoRI GAATTC 2 cut(s) 16, 1750
EcoRII CCWGG 3 cut(s) 76, 1830, 1882
EcoRV GATATC 1 cut(s) 1320
EcoT14I CCWWGG 5 cut(s) 448, 662, 934, 1552, 1723
EcoT38I GRGCYC 2 cut(s) 158, 223
ErhI CCWWGG 5 cut(s) 448, 662, 934, 1552, 1723
Esp3I CGTCTC 1 cut(s) 1832
FalI AAGNNNNNCTT 2 cut(s) 1652, 1684
FaqI GGGAC 3 cut(s) 58, 700, 1853
FauI CCCGC 1 cut(s) 1710
FauNDI CATATG 1 cut(s) 433
FbaI TGATCA 1 cut(s) 825
FblI GTMKAC 1 cut(s) 1678
Fnu4HI GCNGC 7 cut(s) 93, 214, 440, 708, 719, 1038, 1155
FokI GGATG 1 cut(s) 532
FriOI GRGCYC 2 cut(s) 158, 223
Fsp4HI GCNGC 7 cut(s) 93, 214, 440, 708, 719, 1038, 1155
FspBI CTAG 2 cut(s) 1475, 1724
GluI GCNGC 7 cut(s) 93, 214, 440, 708, 719, 1038, 1155
GsuI CTGGAG 4 cut(s) 172, 1137, 1254, 1814
HaeIII GGCC 7 cut(s) 76, 249, 267, 293, 447, 612, 1879
HapII CCGG 8 cut(s) 250, 264, 323, 648, 968, 1764, 1848, 1876
HgaI GACGC 1 cut(s) 868
HincII GTYRAC 3 cut(s) 736, 1264, 1666
HindII GTYRAC 3 cut(s) 736, 1264, 1666
HindIII AAGCTT 1 cut(s) 1308
HinfI GANTC 7 cut(s) 143, 339, 507, 569, 617, 1505, 1767
HpaII CCGG 8 cut(s) 250, 264, 323, 648, 968, 1764, 1848, 1876
HphI GGTGA 7 cut(s) 502, 578, 662, 776, 1396, 1663, 1721
Hpy166II GTNNAC 6 cut(s) 736, 1082, 1199, 1264, 1666, 1679
Hpy8I GTNNAC 6 cut(s) 736, 1082, 1199, 1264, 1666, 1679
Hpy99I CGWCG 1 cut(s) 1794
HpyAV CCTTC 8 cut(s) 1043, 1097, 1160, 1214, 1465, 1558, 1611, 1666
HpyCH4III ACNGT 6 cut(s) 51, 472, 819, 908, 1348, 1900
HpyCH4V TGCA 7 cut(s) 179, 358, 721, 815, 1001, 1357, 1407
HpyF10VI GCNNNNNNNGC 1 cut(s) 355
HpyF3I CTNAG 7 cut(s) 56, 318, 544, 844, 1377, 1526, 1905
Ksp22I TGATCA 1 cut(s) 825
Kzo9I GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
LguI GCTCTTC 1 cut(s) 1770
LmnI GCTCC 3 cut(s) 135, 153, 218
Lsp1109I GCAGC 5 cut(s) 451, 694, 705, 1049, 1166
MabI ACCWGGT 1 cut(s) 1882
MaeI CTAG 2 cut(s) 1475, 1724
MaeIII GTNAC 3 cut(s) 391, 553, 1727
MalI GATC 9 cut(s) 463, 535, 748, 827, 1618, 1719, 1747, 1788, 1863
MboI GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
MflI RGATCY 1 cut(s) 746
MhlI GDGCHC 4 cut(s) 158, 223, 543, 1782
MluCI AATT 9 cut(s) 16, 23, 360, 633, 1041, 1158, 1300, 1576, 1750
MlyI GAGTC 3 cut(s) 137, 578, 1776
MmeI TCCRAC 5 cut(s) 1004, 1121, 1459, 1471, 1563
MroXI GAANNNNTTC 3 cut(s) 975, 1093, 1210
MseI TTAA 3 cut(s) 575, 794, 1565
MslI CAYNNNNRTG 3 cut(s) 302, 384, 518
MspA1I CMGCKG 1 cut(s) 368
MspCI CTTAAG 1 cut(s) 574
MspI CCGG 8 cut(s) 250, 264, 323, 648, 968, 1764, 1848, 1876
MspR9I CCNGG 5 cut(s) 78, 251, 1764, 1832, 1884
Mva1269I GAATGC 4 cut(s) 500, 721, 1108, 1225
MvaI CCWGG 3 cut(s) 78, 1832, 1884
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 1 cut(s) 355
NciI CCSGG 2 cut(s) 251, 1764
NcoI CCATGG 1 cut(s) 1552
NdeI CATATG 1 cut(s) 433
NdeII GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
NlaIV GGNNCC 6 cut(s) 155, 292, 688, 1345, 1395, 1836
NmuCI GTSAC 1 cut(s) 1727
NspI RCATGY 3 cut(s) 418, 732, 879
NspV TTCGAA 1 cut(s) 20
OliI CACNNNNGTG 1 cut(s) 302
PaeI GCATGC 1 cut(s) 732
PciI ACATGT 1 cut(s) 414
PciSI GCTCTTC 1 cut(s) 1770
PctI GAATGC 4 cut(s) 500, 721, 1108, 1225
PdmI GAANNNNTTC 3 cut(s) 975, 1093, 1210
PfeI GAWTC 4 cut(s) 339, 507, 617, 1505
PflFI GACNNNGTC 1 cut(s) 603
PfoI TCCNGGA 1 cut(s) 1762
PinAI ACCGGT 1 cut(s) 647
PkrI GCNGC 7 cut(s) 94, 215, 441, 709, 720, 1039, 1156
PleI GAGTC 3 cut(s) 137, 577, 1775
PpsI GAGTC 3 cut(s) 137, 577, 1775
PscI ACATGT 1 cut(s) 414
PshAI GACNNNNGTC 1 cut(s) 692
Psp124BI GAGCTC 1 cut(s) 223
Psp6I CCWGG 3 cut(s) 76, 1830, 1882
PspEI GGTNACC 1 cut(s) 1727
PspGI CCWGG 3 cut(s) 76, 1830, 1882
PspN4I GGNNCC 6 cut(s) 155, 292, 688, 1345, 1395, 1836
PspPI GGNCC 9 cut(s) 74, 187, 291, 611, 687, 983, 1367, 1794, 1886
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 2 cut(s) 551, 1417
PsuI RGATCY 1 cut(s) 746
PsyI GACNNNGTC 1 cut(s) 603
RsaI GTAC 5 cut(s) 64, 646, 946, 957, 1416
RsaNI GTAC 5 cut(s) 63, 645, 945, 956, 1415
RseI CAYNNNNRTG 3 cut(s) 302, 384, 518
SacI GAGCTC 1 cut(s) 223
SapI GCTCTTC 1 cut(s) 1770
SaqAI TTAA 3 cut(s) 575, 794, 1565
SatI GCNGC 7 cut(s) 93, 214, 440, 708, 719, 1038, 1155
Sau3AI GATC 9 cut(s) 461, 533, 746, 825, 1616, 1717, 1745, 1786, 1861
Sau96I GGNCC 9 cut(s) 74, 187, 291, 611, 687, 983, 1367, 1794, 1886
ScaI AGTACT 1 cut(s) 64
SchI GAGTC 3 cut(s) 137, 578, 1776
ScrFI CCNGG 5 cut(s) 78, 251, 1764, 1832, 1884
SduI GDGCHC 4 cut(s) 158, 223, 543, 1782
SexAI ACCWGGT 1 cut(s) 1882
SfcI CTRYAG 2 cut(s) 904, 999
SfuI TTCGAA 1 cut(s) 20
SinI GGWCC 6 cut(s) 187, 687, 983, 1367, 1794, 1886
SmiMI CAYNNNNRTG 3 cut(s) 302, 384, 518
SmlI CTYRAG 3 cut(s) 574, 680, 1371
SmoI CTYRAG 3 cut(s) 574, 680, 1371
SphI GCATGC 1 cut(s) 732
Sse9I AATT 9 cut(s) 16, 23, 360, 633, 1041, 1158, 1300, 1576, 1750
SsiI CCGC 7 cut(s) 92, 95, 213, 216, 366, 861, 1703
SspMI CTAG 2 cut(s) 1475, 1724
SstI GAGCTC 1 cut(s) 223
StyD4I CCNGG 5 cut(s) 76, 249, 1762, 1830, 1882
StyI CCWWGG 5 cut(s) 448, 662, 934, 1552, 1723
TaaI ACNGT 6 cut(s) 51, 472, 819, 908, 1348, 1900
TaqI TCGA 3 cut(s) 20, 1748, 1860
TaqII GACCGA 1 cut(s) 1782
TasI AATT 9 cut(s) 16, 23, 360, 633, 1041, 1158, 1300, 1576, 1750
TatI WGTACW 2 cut(s) 62, 955
TauI GCSGC 2 cut(s) 95, 216
TfiI GAWTC 4 cut(s) 339, 507, 617, 1505
Tru1I TTAA 3 cut(s) 575, 794, 1565
Tru9I TTAA 3 cut(s) 575, 794, 1565
TscAI CASTG 5 cut(s) 155, 304, 552, 1345, 1858
TseFI GTSAC 1 cut(s) 1727
TseI GCWGC 5 cut(s) 439, 707, 718, 1037, 1154
Tsp45I GTSAC 1 cut(s) 1727
TspDTI ATGAA 5 cut(s) 846, 936, 950, 1593, 1792
TspGWI ACGGA 1 cut(s) 1814
TspRI CASTG 5 cut(s) 155, 304, 552, 1345, 1858
Tth111I GACNNNGTC 1 cut(s) 603
Vha464I CTTAAG 1 cut(s) 574
VpaK11BI GGWCC 6 cut(s) 187, 687, 983, 1367, 1794, 1886
XagI CCTNNNNNAGG 2 cut(s) 618, 1465
XapI RAATTY 5 cut(s) 16, 360, 633, 1300, 1750
XceI RCATGY 3 cut(s) 418, 732, 879
XmaJI CCTAGG 1 cut(s) 1723
XmiI GTMKAC 1 cut(s) 1678
XmnI GAANNNNTTC 3 cut(s) 975, 1093, 1210
XspI CTAG 2 cut(s) 1475, 1724
ZrmI AGTACT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.