Rmu_sc0002901.1_g000002

DNA-damage-repair toleration protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002901.1
Physical Location & Seq
Forward (+)
1870 .. 2796
927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002901.1_g000002.1.cds

Sequence Viewer

Length: 927 bp
atggcggaaaccaccaccaccgcatggccgctcaaaatcatcgccggcgccgactccttcggctgttcactcaaagacgccttggtctcccacctccgctccctcaacatcgacgtcgacgacctcggcacctcctcctactactccatcgccgccgacgtcggccgccgcgtctcctcctcctcctccgccgacgacaccgaaacccgcggactcgtcgcctgcggcaccggagtcggcgtcgcgatcttcgccaacaagttccccggagtcttcgccgccacgtgtctctccccctccgacgccctcaacgcccggtccatcaacaactccaacgtcctcgccgtctccggcaagtccacggcgccggaatccgccgtcgagatcctcgacacgtggctcaacactcccttcaaggcgccgtgtccggcgtcggagtcgaaaccttggccggaagagatatcttcatttcttgataactcaatgaatgacatgccacaaattggagctgattctgatttgaaggagagctcttgctctatctgctgtttggtgaagaatcggaatttgaatccgatagatataattccgggtggatcaatgaagatattgagggagagtcccacatcggccatagttaggtttaaggccgggagcgtggagccggcgcaccaccacactttcggccacgatttggttgtgatggaggggaagaagagtgtgtggaatttaactaagaaggagagatttgatctagttgttggggattacttgtttactccagctggggatgtgcatagagtcaagtactatgaagataccgagttctttatcaagtgggatgggaaatgggatatgttcttcgatgaagatctcgagactgcgaagaaggctgttgatcaagcactggagaatgagggtaagtga

Protein Analysis

308

Amino Acids

33.4

Weight (kDa)

4.93

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014381)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AatII GACGTC 2 cut(s) 117, 162
AccB1I GGYRCC 5 cut(s) 47, 128, 227, 364, 418
AccB7I CCANNNNNTGG 3 cut(s) 24, 503, 694
AccBSI CCGCTC 2 cut(s) 31, 99
AccI GTMKAC 1 cut(s) 117
AccII CGCG 3 cut(s) 171, 210, 245
AclWI GGATC 2 cut(s) 379, 604
AcoI YGGCCR 5 cut(s) 26, 163, 449, 630, 685
AcsI RAATTY 2 cut(s) 565, 727
AcvI CACGTG 2 cut(s) 285, 396
AcyI GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
AfaI GTAC 1 cut(s) 809
AfiI CCNNNNNNNGG 4 cut(s) 24, 503, 639, 694
AflIII ACRYGT 2 cut(s) 284, 393
AgsI TTSAA 3 cut(s) 415, 523, 571
AluBI AGCT 3 cut(s) 509, 531, 785
AluI AGCT 3 cut(s) 509, 531, 785
Alw21I GWGCWC 1 cut(s) 533
Alw26I GTCTC 5 cut(s) 91, 178, 293, 352, 872
AlwI GGATC 2 cut(s) 379, 604
Ama87I CYCGRG 1 cut(s) 875
AoxI GGCC 6 cut(s) 26, 163, 449, 630, 648, 685
ApoI RAATTY 2 cut(s) 565, 727
AspLEI GCGC 4 cut(s) 50, 367, 421, 670
AspS9I GGNCC 1 cut(s) 318
AsuC2I CCSGG 4 cut(s) 267, 316, 591, 652
AsuHPI GGTGA 1 cut(s) 565
AvaI CYCGRG 1 cut(s) 875
AvaII GGWCC 1 cut(s) 318
BanI GGYRCC 5 cut(s) 47, 128, 227, 364, 418
BanII GRGCYC 1 cut(s) 533
BbrPI CACGTG 2 cut(s) 285, 396
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 1 cut(s) 533
BccI CCATC 4 cut(s) 155, 329, 697, 836
BceAI ACGGC 4 cut(s) 329, 362, 378, 406
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BclI TGATCA 1 cut(s) 898
BcnI CCSGG 4 cut(s) 267, 316, 591, 652
BcoDI GTCTC 5 cut(s) 91, 178, 293, 352, 872
BfaI CTAG 1 cut(s) 755
BfoI RGCGCY 3 cut(s) 51, 368, 422
BglII AGATCT 1 cut(s) 871
BisI GCNGC 6 cut(s) 29, 153, 166, 169, 226, 279
BlsI GCNGC 6 cut(s) 30, 154, 167, 170, 227, 280
BmcAI AGTACT 1 cut(s) 809
Bme1390I CCNGG 4 cut(s) 267, 316, 591, 652
Bme18I GGWCC 1 cut(s) 318
BmeT110I CYCGRG 1 cut(s) 875
BmgT120I GGNCC 1 cut(s) 318
BmiI GGNNCC 6 cut(s) 49, 130, 229, 366, 420, 663
BmrFI CCNGG 4 cut(s) 267, 316, 591, 652
BpiI GAAGAC 1 cut(s) 265
BpmI CTGGAG 1 cut(s) 765
BpuMI CCSGG 4 cut(s) 267, 316, 591, 652
BsaAI YACGTR 2 cut(s) 285, 396
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
BsaI GGTCTC 1 cut(s) 91
BsaJI CCNNGG 6 cut(s) 81, 124, 208, 265, 360, 446
BsaWI WCCGGW 1 cut(s) 230
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 225, 255
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 503, 639, 694
Bse118I RCCGGY 2 cut(s) 44, 664
Bse1I ACTGG 1 cut(s) 912
Bse8I GATNNNNATC 1 cut(s) 870
BseDI CCNNGG 6 cut(s) 81, 124, 208, 265, 360, 446
BseGI GGATG 2 cut(s) 796, 847
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 4 cut(s) 24, 503, 639, 694
BseNI ACTGG 1 cut(s) 912
BseRI GAGGAG 5 cut(s) 124, 166, 169, 172, 175
BseX3I CGGCCG 1 cut(s) 163
BseYI CCCAGC 1 cut(s) 785
Bsh1236I CGCG 3 cut(s) 171, 210, 245
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 6 cut(s) 28, 165, 451, 632, 650, 687
BshNI GGYRCC 5 cut(s) 47, 128, 227, 364, 418
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 533
BsiHKCI CYCGRG 1 cut(s) 875
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 4 cut(s) 24, 503, 639, 694
BsmAI GTCTC 5 cut(s) 91, 178, 293, 352, 872
BsmBI CGTCTC 2 cut(s) 178, 352
BsmFI GGGAC 1 cut(s) 606
BsnI GGCC 6 cut(s) 28, 165, 451, 632, 650, 687
Bso31I GGTCTC 1 cut(s) 91
BsoBI CYCGRG 1 cut(s) 875
Bsp1286I GDGCHC 1 cut(s) 533
Bsp143I GATC 6 cut(s) 246, 384, 596, 751, 871, 898
Bsp68I TCGCGA 1 cut(s) 245
BspANI GGCC 6 cut(s) 28, 165, 451, 632, 650, 687
BspFNI CGCG 3 cut(s) 171, 210, 245
BspLI GGNNCC 6 cut(s) 49, 130, 229, 366, 420, 663
BspPI GGATC 2 cut(s) 379, 604
BspT107I GGYRCC 5 cut(s) 47, 128, 227, 364, 418
BspTNI GGTCTC 1 cut(s) 91
BsrBI CCGCTC 2 cut(s) 31, 99
BsrFI RCCGGY 2 cut(s) 44, 664
BsrI ACTGG 1 cut(s) 912
BssAI RCCGGY 2 cut(s) 44, 664
BssECI CCNNGG 6 cut(s) 81, 124, 208, 265, 360, 446
BssMI GATC 6 cut(s) 246, 384, 596, 751, 871, 898
BssNI GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
BssT1I CCWWGG 2 cut(s) 81, 446
Bst6I CTCTTC 2 cut(s) 450, 710
BstACI GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
BstBAI YACGTR 2 cut(s) 285, 396
BstC8I GCNNGC 3 cut(s) 46, 223, 666
BstDEI CTNAG 1 cut(s) 735
BstDSI CCRYGG 2 cut(s) 208, 360
BstF5I GGATG 2 cut(s) 796, 847
BstFNI CGCG 3 cut(s) 171, 210, 245
BstH2I RGCGCY 3 cut(s) 51, 368, 422
BstHHI GCGC 4 cut(s) 50, 367, 421, 670
BstKTI GATC 6 cut(s) 249, 387, 599, 754, 874, 901
BstMAI GTCTC 5 cut(s) 91, 178, 293, 352, 872
BstMBI GATC 6 cut(s) 246, 384, 596, 751, 871, 898
BstMCI CGRYCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 4 cut(s) 251, 311, 543, 890
BstNSI RCATGY 1 cut(s) 496
BstSCI CCNGG 4 cut(s) 265, 314, 589, 650
BstUI CGCG 3 cut(s) 171, 210, 245
BstV2I GAAGAC 1 cut(s) 265
BstX2I RGATCY 2 cut(s) 384, 871
BstYI RGATCY 2 cut(s) 384, 871
BstZI CGGCCG 1 cut(s) 163
BsuRI GGCC 6 cut(s) 28, 165, 451, 632, 650, 687
BtgI CCRYGG 2 cut(s) 208, 360
BtgZI GCGATG 2 cut(s) 25, 133
BtsCI GGATG 2 cut(s) 796, 847
BtsIMutI CAGTG 1 cut(s) 905
BtuMI TCGCGA 1 cut(s) 245
Cac8I GCNNGC 3 cut(s) 46, 223, 666
CfoI GCGC 4 cut(s) 50, 367, 421, 670
Cfr10I RCCGGY 2 cut(s) 44, 664
Cfr13I GGNCC 1 cut(s) 318
Cfr42I CCGCGG 1 cut(s) 211
CseI GACGC 5 cut(s) 86, 160, 229, 311, 420
Csp6I GTAC 1 cut(s) 808
CviAII CATG 2 cut(s) 24, 493
CviQI GTAC 1 cut(s) 808
DdeI CTNAG 1 cut(s) 735
DinI GGCGCC 3 cut(s) 49, 366, 420
DpnI GATC 6 cut(s) 248, 386, 598, 753, 873, 900
DpnII GATC 6 cut(s) 246, 384, 596, 751, 871, 898
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 5 cut(s) 26, 163, 449, 630, 685
EagI CGGCCG 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 450, 710
EarI CTCTTC 2 cut(s) 450, 710
EciI GGCGGA 3 cut(s) 20, 178, 364
Ecl136II GAGCTC 1 cut(s) 531
EclXI CGGCCG 1 cut(s) 163
Eco130I CCWWGG 2 cut(s) 81, 446
Eco24I GRGCYC 1 cut(s) 533
Eco31I GGTCTC 1 cut(s) 91
Eco32I GATATC 1 cut(s) 462
Eco47I GGWCC 1 cut(s) 318
Eco52I CGGCCG 1 cut(s) 163
Eco53kI GAGCTC 1 cut(s) 531
Eco72I CACGTG 2 cut(s) 285, 396
Eco88I CYCGRG 1 cut(s) 875
EcoICRI GAGCTC 1 cut(s) 531
EcoRV GATATC 1 cut(s) 462
EcoT14I CCWWGG 2 cut(s) 81, 446
EcoT38I GRGCYC 1 cut(s) 533
EgeI GGCGCC 3 cut(s) 49, 366, 420
EheI GGCGCC 3 cut(s) 49, 366, 420
ErhI CCWWGG 2 cut(s) 81, 446
Esp3I CGTCTC 2 cut(s) 178, 352
FaeI CATG 2 cut(s) 27, 496
FaiI YATR 7 cut(s) 25, 494, 584, 635, 798, 813, 857
FaqI GGGAC 1 cut(s) 606
FatI CATG 2 cut(s) 23, 492
FauI CCCGC 1 cut(s) 215
FbaI TGATCA 1 cut(s) 898
FblI GTMKAC 1 cut(s) 117
Fnu4HI GCNGC 6 cut(s) 29, 153, 166, 169, 226, 279
FokI GGATG 2 cut(s) 803, 854
FriOI GRGCYC 1 cut(s) 533
Fsp4HI GCNGC 6 cut(s) 29, 153, 166, 169, 226, 279
FspBI CTAG 1 cut(s) 755
GlaI GCGC 4 cut(s) 49, 366, 420, 669
GluI GCNGC 6 cut(s) 29, 153, 166, 169, 226, 279
GsaI CCCAGC 1 cut(s) 789
GsuI CTGGAG 1 cut(s) 765
HaeII RGCGCY 3 cut(s) 51, 368, 422
HaeIII GGCC 6 cut(s) 28, 165, 451, 632, 650, 687
HgaI GACGC 5 cut(s) 86, 160, 229, 311, 420
HhaI GCGC 4 cut(s) 50, 367, 421, 670
Hin1I GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
Hin1II CATG 2 cut(s) 27, 496
Hin6I GCGC 4 cut(s) 48, 365, 419, 668
HinP1I GCGC 4 cut(s) 48, 365, 419, 668
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HphI GGTGA 1 cut(s) 565
Hpy166II GTNNAC 4 cut(s) 68, 118, 360, 777
Hpy188I TCNGA 5 cut(s) 301, 436, 517, 564, 576
Hpy188III TCNNGA 5 cut(s) 244, 382, 473, 875, 877
Hpy8I GTNNAC 4 cut(s) 68, 118, 360, 777
HpyAV CCTTC 5 cut(s) 67, 421, 517, 733, 883
HpyCH4IV ACGT 5 cut(s) 114, 159, 284, 336, 395
HpyCH4V TGCA 1 cut(s) 796
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 311, 543, 890
HpyF3I CTNAG 1 cut(s) 735
HpySE526I ACGT 5 cut(s) 114, 159, 284, 336, 395
Hsp92I GRCGYC 9 cut(s) 48, 78, 114, 159, 240, 303, 365, 419, 431
Hsp92II CATG 2 cut(s) 27, 496
HspAI GCGC 4 cut(s) 48, 365, 419, 668
KasI GGCGCC 3 cut(s) 47, 364, 418
KroI GCCGGC 2 cut(s) 44, 664
KroNI GCCGGC 2 cut(s) 46, 666
Ksp22I TGATCA 1 cut(s) 898
KspI CCGCGG 1 cut(s) 211
Kzo9I GATC 6 cut(s) 246, 384, 596, 751, 871, 898
LmnI GCTCC 4 cut(s) 104, 506, 654, 661
MaeI CTAG 1 cut(s) 755
MaeII ACGT 5 cut(s) 114, 159, 284, 336, 395
MalI GATC 6 cut(s) 248, 386, 598, 753, 873, 900
MbiI CCGCTC 2 cut(s) 31, 99
MboI GATC 6 cut(s) 246, 384, 596, 751, 871, 898
MflI RGATCY 2 cut(s) 384, 871
MhlI GDGCHC 1 cut(s) 533
MluCI AATT 4 cut(s) 501, 565, 585, 727
Mly113I GGCGCC 3 cut(s) 48, 365, 419
MlyI GAGTC 7 cut(s) 47, 207, 243, 279, 446, 628, 810
MmeI TCCRAC 3 cut(s) 324, 357, 414
MreI CGCCGGCG 1 cut(s) 44
MroNI GCCGGC 2 cut(s) 44, 664
MseI TTAA 2 cut(s) 645, 731
MspA1I CMGCKG 2 cut(s) 210, 785
MspR9I CCNGG 4 cut(s) 267, 316, 591, 652
MvnI CGCG 3 cut(s) 171, 210, 245
MwoI GCNNNNNNNGC 4 cut(s) 251, 311, 543, 890
NaeI GCCGGC 2 cut(s) 46, 666
NarI GGCGCC 3 cut(s) 48, 365, 419
NciI CCSGG 4 cut(s) 267, 316, 591, 652
NdeII GATC 6 cut(s) 246, 384, 596, 751, 871, 898
NgoMIV GCCGGC 2 cut(s) 44, 664
NlaIII CATG 2 cut(s) 27, 496
NlaIV GGNNCC 6 cut(s) 49, 130, 229, 366, 420, 663
NmeAIII GCCGAG 1 cut(s) 105
NruI TCGCGA 1 cut(s) 245
NspI RCATGY 1 cut(s) 496
PaeR7I CTCGAG 1 cut(s) 875
PcsI WCGNNNNNNNCGW 6 cut(s) 48, 117, 156, 168, 342, 387
PdiI GCCGGC 2 cut(s) 46, 666
PfeI GAWTC 4 cut(s) 371, 512, 559, 571
PflMI CCANNNNNTGG 3 cut(s) 24, 503, 694
PkrI GCNGC 6 cut(s) 30, 154, 167, 170, 227, 280
PleI GAGTC 7 cut(s) 47, 207, 242, 278, 445, 627, 809
PluTI GGCGCC 3 cut(s) 51, 368, 422
PmaCI CACGTG 2 cut(s) 285, 396
PmlI CACGTG 2 cut(s) 285, 396
PpsI GAGTC 7 cut(s) 47, 207, 242, 278, 445, 627, 809
Ppu21I YACGTR 2 cut(s) 285, 396
Psp124BI GAGCTC 1 cut(s) 533
PspCI CACGTG 2 cut(s) 285, 396
PspFI CCCAGC 1 cut(s) 785
PspN4I GGNNCC 6 cut(s) 49, 130, 229, 366, 420, 663
PspPI GGNCC 1 cut(s) 318
PsuI RGATCY 2 cut(s) 384, 871
PvuII CAGCTG 1 cut(s) 785
RruI TCGCGA 1 cut(s) 245
RsaI GTAC 1 cut(s) 809
RsaNI GTAC 1 cut(s) 808
SacI GAGCTC 1 cut(s) 533
SacII CCGCGG 1 cut(s) 211
SalI GTCGAC 1 cut(s) 116
SaqAI TTAA 2 cut(s) 645, 731
SatI GCNGC 6 cut(s) 29, 153, 166, 169, 226, 279
Sau3AI GATC 6 cut(s) 246, 384, 596, 751, 871, 898
Sau96I GGNCC 1 cut(s) 318
ScaI AGTACT 1 cut(s) 809
SchI GAGTC 7 cut(s) 47, 207, 243, 279, 446, 628, 810
ScrFI CCNGG 4 cut(s) 267, 316, 591, 652
SduI GDGCHC 1 cut(s) 533
SfoI GGCGCC 3 cut(s) 49, 366, 420
Sfr274I CTCGAG 1 cut(s) 875
Sfr303I CCGCGG 1 cut(s) 211
SgrAI CRCCGGYG 1 cut(s) 44
SgrBI CCGCGG 1 cut(s) 211
SgrDI CGTCGACG 1 cut(s) 116
SinI GGWCC 1 cut(s) 318
SlaI CTCGAG 1 cut(s) 875
SmlI CTYRAG 1 cut(s) 875
SmoI CTYRAG 1 cut(s) 875
Sse9I AATT 4 cut(s) 501, 565, 585, 727
SspDI GGCGCC 3 cut(s) 47, 364, 418
SspMI CTAG 1 cut(s) 755
SstI GAGCTC 1 cut(s) 533
StyD4I CCNGG 4 cut(s) 265, 314, 589, 650
StyI CCWWGG 2 cut(s) 81, 446
TaiI ACGT 5 cut(s) 117, 162, 287, 339, 398
TaqI TCGA 7 cut(s) 111, 117, 381, 390, 440, 864, 876
TasI AATT 4 cut(s) 501, 565, 585, 727
TatI WGTACW 1 cut(s) 807
TauI GCSGC 6 cut(s) 31, 155, 168, 171, 228, 281
TfiI GAWTC 4 cut(s) 371, 512, 559, 571
Tru1I TTAA 2 cut(s) 645, 731
Tru9I TTAA 2 cut(s) 645, 731
TscAI CASTG 1 cut(s) 912
TspDTI ATGAA 5 cut(s) 456, 500, 617, 828, 882
TspRI CASTG 1 cut(s) 912
Van91I CCANNNNNTGG 3 cut(s) 24, 503, 694
VpaK11BI GGWCC 1 cut(s) 318
XapI RAATTY 2 cut(s) 565, 727
XceI RCATGY 1 cut(s) 496
XhoI CTCGAG 1 cut(s) 875
XmiI GTMKAC 1 cut(s) 117
XspI CTAG 1 cut(s) 755
ZraI GACGTC 2 cut(s) 115, 160
ZrmI AGTACT 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.