Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003499.1

Orthogroup ID

OG0002142

Physical Location & Seq

Genomic Coordinates Forward (+)

48241 .. 54797

Gene Structure 6557 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

atgctgttgacgactacagctttatctgaagctgttacaaagattgaggagaagcatagggacctctgtcgcttggtcatacagttcataccacctgtgacacctccccagttgcctggttcagtgtttaggacatttctacagaaccttctactaaagaacagaggagctgaccgcaatcttccacctcctggagtttcaagcaattctgttcttgtttctttgtacacagttatacttcattttttatctgaggggtttggaatgggggaaatatgcggttggttgaagcacagtgaaaaaggtcgtgatgttggttttcttcataggggtggtcatcgaagctttccagtaggtttatttcttagaaatgatcctcatcgaaatgacaataccaggcttggaggatcttttagtcatctctcaaaatcacaccctgtagatgatcaggaagcagaagatatccggtgggaggaaggttgtatggatgatgaagaaacgagagtgactcatctaagtacaagaaaaccatgctgctgctcaagttacgacgaggattttacaagaatctcaaagaatccaattagatacacagctaaaggttcccgtgcccattgcagtcccatgccagagagatcttcccatgttactacagaatgcagtgctggaagtttgagtgatgatatggctgataaacctagttctagctaccaatctgaatctgattttagttattgcccggtgcaaaatacgagttttgtaccaagggagggtattatctcgtcagctacgctcagagaagaagaacttctagatgttctattgctgttgtatcatataggtcttgcgccaaattttaagcaggcatcatattacatgaatcaccagttgcagtcaattgccaatcttgaagaaactgataaaaaaattcgagaaggaccttgttttgagcaattgaagcatttgaaagaagctcgtaatgttcatagagaagaggttattgattctgtaagacaatgcgcttggtaccgtatctccctatcctctagatggaagcaaagaggaatgtatgcaacatgcatgtggactgttcagttgcttcttgtccttagcaaagtggatttgttgttcacttttgtccctgaatactatcttgaagctctggttgactgctttcatgtgttgcgcaagtgtgatcctccatttgtcccttcatcaatatttatcaagcaaggccttgcttcatttatcacctttgtggttacgcatttcaacgaccctcgaatatctagtgcagatcttagggatctgcttctccaatctatttcggtcttggtacaatacaaagaatatttggctgcgtttgagagcaatgaagcagcgaaacggaggatgccaaaagcattgctgtcagcatttgataatagatcctggatcccagtaacgaacattcttctgcgtttgtgcaagggatctgggtttggctcatcaaagcatggagaatcatcgtcatcatccatcatcttccagaggttgttagggcaagcttgcatcagtgatgaagggttgttctcggcttttctcaatcgcctgtttaacactctcagttggacaatgactgaattctcagtttctgttagagaaatgcaagaaaagtaccaggtgttagagttccagcagaagaaatgcagtgtgatatatgatctgtcatgcaatcttgcaagggttttggaattctgtactcatgagatacctcaagcatttctatctggggctgatacaaaccttcggaggttgactgagctgattgtctttattctgaaccacatcacttcagcagaagattccgagttttttgacttgtctttgagacgacatggtcaatctttagaaaaagtaaaccgagggatggtattggcacctctggtaggtattatcttgaacctgacaaatgctagtgaacagatggaatgcagggagcacaatgatgttgtcagcatctttgcaagcatggggtgccttgacagttttaattgcagatttcagtacctattggattacaactgggctggaattttaagaggcgatgcttatcttggaaaaattgcggagctagagaattttctgaacctcatccttctccgtagccaatcacaagaaaataagatatcagggggagaaactgatgtgaatgataacatgtgctgcatttgttatgcatgtgaagcagatgcacgatttgcaccttgttcccataggtcttgttatggctgcataaccagacatcttttgaattgccacagatgcttcttttgcaatgcagctgtactagatgttgtcaggattagtgagaaggcagattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030163 GO:0032446 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0060154 GO:0065007 GO:0070647 GO:0071704 GO:0098586 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPRY Ufd2P_core zf-C3HC4_3

Protein Analysis

787

Amino Acids

89.18

Weight (kDa)

6.23

Isoelectric Point (pI)

50.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_RNF123	PF25576	525 - 717	2.2e-82	RNF123-like, TPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22010 AT2G22010
fragaria_vesca	FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_7g04730 FvH4_7g04730
malus_domestica	MD01G1017400.v1.1 MD15G1333600.v1.1
prunus_persica	Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1
pyrus_communis	pycom01g04820 pycom01g04830 pycom15g29160 pycom15g29170
rosa_chinensis	RchiOBHm_Chr2g0116231
rosa_laevigata	RLG00000018249
rosa_multiflora	Rmu_sc0003499.1_g000012 Rmu_sc0004888.1_g000064
rosa_roxburghii	Rroxscaffold_2G00127410
rosa_rugosa	Rorug02G0205000
rosa_samantha	Rh2AG260600 Rh2BG271700 Rh2CG266800 Rh2DG268800
rosa_wichuraiana	Rw2G020430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1878
Acc16I	TGCGCA	1 cut(s)	1187
Acc65I	GGTACC	1 cut(s)	1026
AccB1I	GGYRCC	3 cut(s)	1026, 1918, 2016
AccB7I	CCANNNNNTGG	1 cut(s)	191
AciI	CCGC	3 cut(s)	175, 279, 2108
AclWI	GGATC	8 cut(s)	368, 415, 1190, 1314, 1422, 1429, 1442, 1480
AcsI	RAATTY	6 cut(s)	853, 927, 1622, 1733, 2073, 2119
AcuI	CTGAAG	2 cut(s)	48, 1818
AfaI	GTAC	9 cut(s)	227, 520, 762, 1028, 1338, 1658, 1741, 2048, 2328
AfiI	CCNNNNNNNGG	6 cut(s)	191, 472, 770, 1050, 1909, 1928
AflIII	ACRYGT	1 cut(s)	2199
AgsI	TTSAA	9 cut(s)	201, 289, 911, 958, 967, 1157, 1273, 1942, 2293
AjnI	CCWGG	5 cut(s)	115, 190, 395, 1430, 1659
AleI	CACNNNNGTG	1 cut(s)	1256
AloI	GAACNNNNNNTCC	2 cut(s)	1112, 1144
Alw21I	GWGCWC	1 cut(s)	1983
Alw26I	GTCTC	1 cut(s)	1864
AlwI	GGATC	8 cut(s)	368, 415, 1190, 1314, 1422, 1429, 1442, 1480
AlwNI	CAGNNNCTG	1 cut(s)	1634
AoxI	GGCC	1 cut(s)	1234
ApeKI	GCWGC	7 cut(s)	534, 537, 1358, 1379, 2205, 2271, 2321
ApoI	RAATTY	6 cut(s)	853, 927, 1622, 1733, 2073, 2119
Asp700I	GAANNNNTTC	1 cut(s)	807
Asp718I	GGTACC	1 cut(s)	1026
AspLEI	GCGC	3 cut(s)	850, 1022, 1188
AspS9I	GGNCC	2 cut(s)	61, 938
AsuC2I	CCSGG	1 cut(s)	740
AsuHPI	GGTGA	2 cut(s)	875, 1243
AvaII	GGWCC	2 cut(s)	61, 938
BaeGI	GKGCMC	1 cut(s)	613
BamHI	GGATCC	1 cut(s)	1434
BanI	GGYRCC	3 cut(s)	1026, 1918, 2016
Bbv12I	GWGCWC	1 cut(s)	1983
BbvI	GCAGC	7 cut(s)	521, 524, 1345, 1391, 2192, 2258, 2333
BccI	CCATC	4 cut(s)	1044, 1526, 1903, 1960
BciT130I	CCWGG	5 cut(s)	117, 192, 397, 1432, 1661
BclI	TGATCA	1 cut(s)	445
BcnI	CCSGG	1 cut(s)	740
BcoDI	GTCTC	1 cut(s)	1864
BfaI	CTAG	8 cut(s)	699, 705, 812, 1047, 1290, 1956, 2114, 2330
BfmI	CTRYAG	4 cut(s)	15, 140, 438, 651
BglII	AGATCT	2 cut(s)	635, 1297
BisI	GCNGC	7 cut(s)	535, 538, 1359, 1380, 2206, 2272, 2322
BlsI	GCNGC	7 cut(s)	536, 539, 1360, 1381, 2207, 2273, 2323
Bme1390I	CCNGG	6 cut(s)	117, 192, 397, 740, 1432, 1661
Bme18I	GGWCC	2 cut(s)	61, 938
BmgT120I	GGNCC	2 cut(s)	61, 938
BmiI	GGNNCC	6 cut(s)	62, 604, 1028, 1436, 1920, 2018
BmrFI	CCNGG	6 cut(s)	117, 192, 397, 740, 1432, 1661
BmrI	ACTGGG	3 cut(s)	103, 1433, 2074
BmsI	GCATC	7 cut(s)	875, 1383, 1560, 2007, 2077, 2221, 2294
BmuI	ACTGGG	3 cut(s)	103, 1433, 2074
BoxI	GACNNNNGTC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	493, 525
BpmI	CTGGAG	1 cut(s)	213
Bpu10I	CCTNAGC	1 cut(s)	1109
BpuEI	CTTGAG	2 cut(s)	526, 1740
BpuMI	CCSGG	1 cut(s)	740
BsaBI	GATNNNNATC	2 cut(s)	378, 2091
BsaJI	CCNNGG	2 cut(s)	764, 1903
BsaWI	WCCGGW	1 cut(s)	465
BsaXI	ACNNNNNCTCC	2 cut(s)	1019, 1049
Bsc4I	CCNNNNNNNGG	6 cut(s)	191, 472, 770, 1050, 1909, 1928
Bse1I	ACTGG	5 cut(s)	109, 350, 886, 1439, 2069
Bse3DI	GCAATG	4 cut(s)	613, 1378, 1403, 2323
Bse8I	GATNNNNATC	2 cut(s)	378, 2091
BseBI	CCWGG	5 cut(s)	117, 192, 397, 1432, 1661
BseDI	CCNNGG	2 cut(s)	764, 1903
BseGI	GGATG	5 cut(s)	493, 1398, 1514, 1914, 2133
BseJI	GATNNNNATC	2 cut(s)	378, 2091
BseLI	CCNNNNNNNGG	6 cut(s)	191, 472, 770, 1050, 1909, 1928
BseMI	GCAATG	4 cut(s)	613, 1378, 1403, 2323
BseMII	CTCAG	5 cut(s)	243, 808, 1618, 1641, 1791
BseNI	ACTGG	5 cut(s)	109, 350, 886, 1439, 2069
BseRI	GAGGAG	2 cut(s)	62, 180
BseSI	GKGCMC	1 cut(s)	613
BseXI	GCAGC	7 cut(s)	521, 524, 1345, 1391, 2192, 2258, 2333
BsgI	GTGCAG	1 cut(s)	1314
BshFI	GGCC	1 cut(s)	1236
BshNI	GGYRCC	3 cut(s)	1026, 1918, 2016
BsiHKAI	GWGCWC	1 cut(s)	1983
BsiSI	CCGG	2 cut(s)	466, 740
BslFI	GGGAC	4 cut(s)	74, 606, 1124, 1193
BslI	CCNNNNNNNGG	6 cut(s)	191, 472, 770, 1050, 1909, 1928
BsmAI	GTCTC	1 cut(s)	1864
BsmBI	CGTCTC	1 cut(s)	1864
BsmFI	GGGAC	4 cut(s)	74, 606, 1124, 1193
BsmI	GAATGC	2 cut(s)	662, 1976
BsnI	GGCC	1 cut(s)	1236
Bsp1286I	GDGCHC	2 cut(s)	613, 1983
Bsp1407I	TGTACA	1 cut(s)	225
BspACI	CCGC	3 cut(s)	175, 279, 2108
BspANI	GGCC	1 cut(s)	1236
BspCNI	CTCAG	5 cut(s)	244, 807, 1617, 1640, 1792
BspHI	TCATGA	1 cut(s)	1744
BspLI	GGNNCC	6 cut(s)	62, 604, 1028, 1436, 1920, 2018
BspPI	GGATC	8 cut(s)	368, 415, 1190, 1314, 1422, 1429, 1442, 1480
BspT107I	GGYRCC	3 cut(s)	1026, 1918, 2016
BsrDI	GCAATG	4 cut(s)	613, 1378, 1403, 2323
BsrGI	TGTACA	1 cut(s)	225
BsrI	ACTGG	5 cut(s)	109, 350, 886, 1439, 2069
BssECI	CCNNGG	2 cut(s)	764, 1903
BssT1I	CCWWGG	1 cut(s)	764
Bst2UI	CCWGG	5 cut(s)	117, 192, 397, 1432, 1661
Bst4CI	ACNGT	6 cut(s)	84, 232, 296, 1031, 1090, 2027
Bst6I	CTCTTC	1 cut(s)	987
BstAPI	GCANNNNNTGC	2 cut(s)	2016, 2240
BstAUI	TGTACA	1 cut(s)	225
BstC8I	GCNNGC	4 cut(s)	864, 1545, 1549, 2008
BstDEI	CTNAG	9 cut(s)	252, 365, 515, 794, 1109, 1301, 1604, 1627, 1800
BstENI	CCTNNNNNAGG	1 cut(s)	1926
BstF5I	GGATG	5 cut(s)	493, 1398, 1514, 1914, 2133
BstHHI	GCGC	3 cut(s)	850, 1022, 1188
BstMAI	GTCTC	1 cut(s)	1864
BstMWI	GCNNNNNNNGC	6 cut(s)	958, 2016, 2225, 2240, 2304, 2313
BstNI	CCWGG	5 cut(s)	117, 192, 397, 1432, 1661
BstNSI	RCATGY	4 cut(s)	1080, 1084, 2203, 2223
BstPAI	GACNNNNGTC	1 cut(s)	66
BstSCI	CCNGG	6 cut(s)	115, 190, 395, 738, 1430, 1659
BstSFI	CTRYAG	4 cut(s)	15, 140, 438, 651
BstSLI	GKGCMC	1 cut(s)	613
BstV1I	GCAGC	7 cut(s)	521, 524, 1345, 1391, 2192, 2258, 2333
BstX2I	RGATCY	7 cut(s)	407, 635, 1297, 1306, 1427, 1434, 1472
BstXI	CCANNNNNNTGG	1 cut(s)	116
BstYI	RGATCY	7 cut(s)	407, 635, 1297, 1306, 1427, 1434, 1472
BsuRI	GGCC	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	2100
BtsCI	GGATG	5 cut(s)	493, 1398, 1514, 1914, 2133
BtsI	GCAGTG	2 cut(s)	667, 1696
BtsIMutI	CAGTG	5 cut(s)	129, 301, 667, 1561, 1696
Cac8I	GCNNGC	4 cut(s)	864, 1545, 1549, 2008
CaiI	CAGNNNCTG	1 cut(s)	1634
CciI	TCATGA	1 cut(s)	1744
CfoI	GCGC	3 cut(s)	850, 1022, 1188
Cfr13I	GGNCC	2 cut(s)	61, 938
CsiI	ACCWGGT	1 cut(s)	1659
Csp6I	GTAC	9 cut(s)	226, 519, 761, 1027, 1337, 1657, 1740, 2047, 2327
CviQI	GTAC	9 cut(s)	226, 519, 761, 1027, 1337, 1657, 1740, 2047, 2327
DdeI	CTNAG	9 cut(s)	252, 365, 515, 794, 1109, 1301, 1604, 1627, 1800
DrdI	GACNNNNNNGTC	1 cut(s)	1878
DseDI	GACNNNNNNGTC	1 cut(s)	1878
Eam1104I	CTCTTC	1 cut(s)	987
EarI	CTCTTC	1 cut(s)	987
Eco130I	CCWWGG	1 cut(s)	764
Eco147I	AGGCCT	1 cut(s)	1236
Eco32I	GATATC	2 cut(s)	463, 2169
Eco47I	GGWCC	2 cut(s)	61, 938
Eco57I	CTGAAG	2 cut(s)	48, 1818
EcoNI	CCTNNNNNAGG	1 cut(s)	1926
EcoO109I	RGGNCCY	2 cut(s)	61, 938
EcoRI	GAATTC	2 cut(s)	1622, 1733
EcoRII	CCWGG	5 cut(s)	115, 190, 395, 1430, 1659
EcoRV	GATATC	2 cut(s)	463, 2169
EcoT14I	CCWWGG	1 cut(s)	764
EcoT22I	ATGCAT	2 cut(s)	1082, 2221
ErhI	CCWWGG	1 cut(s)	764
Esp3I	CGTCTC	1 cut(s)	1864
FalI	AAGNNNNNCTT	2 cut(s)	792, 824
FaqI	GGGAC	4 cut(s)	74, 606, 1124, 1193
FbaI	TGATCA	1 cut(s)	445
Fnu4HI	GCNGC	7 cut(s)	535, 538, 1359, 1380, 2206, 2272, 2322
FokI	GGATG	5 cut(s)	500, 1405, 1501, 1921, 2120
Fsp4HI	GCNGC	7 cut(s)	535, 538, 1359, 1380, 2206, 2272, 2322
FspBI	CTAG	8 cut(s)	699, 705, 812, 1047, 1290, 1956, 2114, 2330
FspI	TGCGCA	1 cut(s)	1187
GlaI	GCGC	3 cut(s)	849, 1021, 1187
GluI	GCNGC	7 cut(s)	535, 538, 1359, 1380, 2206, 2272, 2322
GsuI	CTGGAG	1 cut(s)	213
HaeIII	GGCC	1 cut(s)	1236
HapII	CCGG	2 cut(s)	466, 740
HhaI	GCGC	3 cut(s)	850, 1022, 1188
Hin6I	GCGC	3 cut(s)	848, 1020, 1186
HinP1I	GCGC	3 cut(s)	848, 1020, 1186
HincII	GTYRAC	3 cut(s)	9, 1168, 1797
HindII	GTYRAC	3 cut(s)	9, 1168, 1797
HindIII	AAGCTT	2 cut(s)	343, 1545
HinfI	GANTC	8 cut(s)	508, 567, 577, 719, 880, 1004, 1502, 1844
HpaII	CCGG	2 cut(s)	466, 740
HphI	GGTGA	2 cut(s)	875, 1243
Hpy166II	GTNNAC	8 cut(s)	9, 228, 1086, 1131, 1168, 1797, 1900, 1961
Hpy188I	TCNGA	9 cut(s)	28, 253, 718, 724, 797, 1791, 1821, 1849, 2127
Hpy8I	GTNNAC	8 cut(s)	9, 228, 1086, 1131, 1168, 1797, 1900, 1961
Hpy99I	CGWCG	1 cut(s)	554
HpyAV	CCTTC	8 cut(s)	158, 470, 929, 1221, 1556, 1796, 2147, 2347
HpyCH4III	ACNGT	6 cut(s)	84, 232, 296, 1031, 1090, 2027
HpyF10VI	GCNNNNNNNGC	6 cut(s)	958, 2016, 2225, 2240, 2304, 2313
HpyF3I	CTNAG	9 cut(s)	252, 365, 515, 794, 1109, 1301, 1604, 1627, 1800
HspAI	GCGC	3 cut(s)	848, 1020, 1186
KpnI	GGTACC	1 cut(s)	1030
Ksp22I	TGATCA	1 cut(s)	445
LmnI	GCTCC	3 cut(s)	167, 1978, 2110
Lsp1109I	GCAGC	7 cut(s)	521, 524, 1345, 1391, 2192, 2258, 2333
LweI	GCATC	7 cut(s)	875, 1383, 1560, 2007, 2077, 2221, 2294
MabI	ACCWGGT	1 cut(s)	1659
MaeI	CTAG	8 cut(s)	699, 705, 812, 1047, 1290, 1956, 2114, 2330
MaeIII	GTNAC	7 cut(s)	34, 97, 505, 545, 646, 1261, 1441
MfeI	CAATTG	2 cut(s)	897, 953
MflI	RGATCY	7 cut(s)	407, 635, 1297, 1306, 1427, 1434, 1472
MhlI	GDGCHC	2 cut(s)	613, 1983
MlyI	GAGTC	1 cut(s)	502
MmeI	TCCRAC	1 cut(s)	1589
Mph1103I	ATGCAT	2 cut(s)	1082, 2221
MroXI	GAANNNNTTC	1 cut(s)	807
MseI	TTAA	4 cut(s)	858, 1596, 2031, 2078
MslI	CAYNNNNRTG	5 cut(s)	330, 384, 1081, 1256, 1986
MspA1I	CMGCKG	1 cut(s)	2324
MspI	CCGG	2 cut(s)	466, 740
MspR9I	CCNGG	6 cut(s)	117, 192, 397, 740, 1432, 1661
MunI	CAATTG	2 cut(s)	897, 953
Mva1269I	GAATGC	2 cut(s)	662, 1976
MvaI	CCWGG	5 cut(s)	117, 192, 397, 1432, 1661
MwoI	GCNNNNNNNGC	6 cut(s)	958, 2016, 2225, 2240, 2304, 2313
NciI	CCSGG	1 cut(s)	740
NlaIV	GGNNCC	6 cut(s)	62, 604, 1028, 1436, 1920, 2018
NmeAIII	GCCGAG	1 cut(s)	1553
NmuCI	GTSAC	2 cut(s)	97, 505
NsbI	TGCGCA	1 cut(s)	1187
NsiI	ATGCAT	2 cut(s)	1082, 2221
NspI	RCATGY	4 cut(s)	1080, 1084, 2203, 2223
OliI	CACNNNNGTG	1 cut(s)	1256
PagI	TCATGA	1 cut(s)	1744
PceI	AGGCCT	1 cut(s)	1236
PciI	ACATGT	1 cut(s)	2199
PctI	GAATGC	2 cut(s)	662, 1976
PdmI	GAANNNNTTC	1 cut(s)	807
PfeI	GAWTC	7 cut(s)	567, 577, 719, 880, 1004, 1502, 1844
PflFI	GACNNNGTC	1 cut(s)	1878
PflMI	CCANNNNNTGG	1 cut(s)	191
PfoI	TCCNGGA	2 cut(s)	190, 1430
PkrI	GCNGC	7 cut(s)	536, 539, 1360, 1381, 2207, 2273, 2323
PleI	GAGTC	1 cut(s)	502
PpsI	GAGTC	1 cut(s)	502
PpuMI	RGGWCCY	2 cut(s)	61, 938
PscI	ACATGT	1 cut(s)	2199
PshAI	GACNNNNGTC	1 cut(s)	66
Psp5II	RGGWCCY	2 cut(s)	61, 938
Psp6I	CCWGG	5 cut(s)	115, 190, 395, 1430, 1659
PspGI	CCWGG	5 cut(s)	115, 190, 395, 1430, 1659
PspN4I	GGNNCC	6 cut(s)	62, 604, 1028, 1436, 1920, 2018
PspPI	GGNCC	2 cut(s)	61, 938
PspPPI	RGGWCCY	2 cut(s)	61, 938
PstNI	CAGNNNCTG	1 cut(s)	1634
PsuI	RGATCY	7 cut(s)	407, 635, 1297, 1306, 1427, 1434, 1472
PsyI	GACNNNGTC	1 cut(s)	1878
PvuII	CAGCTG	1 cut(s)	2324
RsaI	GTAC	9 cut(s)	227, 520, 762, 1028, 1338, 1658, 1741, 2048, 2328
RsaNI	GTAC	9 cut(s)	226, 519, 761, 1027, 1337, 1657, 1740, 2047, 2327
RseI	CAYNNNNRTG	5 cut(s)	330, 384, 1081, 1256, 1986
SaqAI	TTAA	4 cut(s)	858, 1596, 2031, 2078
SatI	GCNGC	7 cut(s)	535, 538, 1359, 1380, 2206, 2272, 2322
Sau96I	GGNCC	2 cut(s)	61, 938
SchI	GAGTC	1 cut(s)	502
ScrFI	CCNGG	6 cut(s)	117, 192, 397, 740, 1432, 1661
SduI	GDGCHC	2 cut(s)	613, 1983
SexAI	ACCWGGT	1 cut(s)	1659
SfaNI	GCATC	7 cut(s)	875, 1383, 1560, 2007, 2077, 2221, 2294
SfcI	CTRYAG	4 cut(s)	15, 140, 438, 651
SinI	GGWCC	2 cut(s)	61, 938
SmiMI	CAYNNNNRTG	5 cut(s)	330, 384, 1081, 1256, 1986
SmlI	CTYRAG	2 cut(s)	541, 1755
SmoI	CTYRAG	2 cut(s)	541, 1755
SseBI	AGGCCT	1 cut(s)	1236
SsiI	CCGC	3 cut(s)	175, 279, 2108
SspI	AATATT	2 cut(s)	1221, 1352
SspMI	CTAG	8 cut(s)	699, 705, 812, 1047, 1290, 1956, 2114, 2330
StuI	AGGCCT	1 cut(s)	1236
StyD4I	CCNGG	6 cut(s)	115, 190, 395, 738, 1430, 1659
StyI	CCWWGG	1 cut(s)	764
TaaI	ACNGT	6 cut(s)	84, 232, 296, 1031, 1090, 2027
TaqI	TCGA	4 cut(s)	340, 382, 931, 1282
TaqII	GACCGA	1 cut(s)	1318
TatI	WGTACW	4 cut(s)	225, 518, 1739, 2326
TfiI	GAWTC	7 cut(s)	567, 577, 719, 880, 1004, 1502, 1844
Tru1I	TTAA	4 cut(s)	858, 1596, 2031, 2078
Tru9I	TTAA	4 cut(s)	858, 1596, 2031, 2078
TscAI	CASTG	5 cut(s)	129, 301, 667, 1561, 1696
TseFI	GTSAC	2 cut(s)	97, 505
TseI	GCWGC	7 cut(s)	534, 537, 1358, 1379, 2205, 2271, 2321
Tsp45I	GTSAC	2 cut(s)	97, 505
TspGWI	ACGGA	2 cut(s)	1402, 2132
TspRI	CASTG	5 cut(s)	129, 301, 667, 1561, 1696
Tth111I	GACNNNGTC	1 cut(s)	1878
Van91I	CCANNNNNTGG	1 cut(s)	191
VpaK11BI	GGWCC	2 cut(s)	61, 938
XagI	CCTNNNNNAGG	1 cut(s)	1926
XapI	RAATTY	6 cut(s)	853, 927, 1622, 1733, 2073, 2119
XbaI	TCTAGA	2 cut(s)	811, 1046
XceI	RCATGY	4 cut(s)	1080, 1084, 2203, 2223
XmnI	GAANNNNTTC	1 cut(s)	807
XspI	CTAG	8 cut(s)	699, 705, 812, 1047, 1290, 1956, 2114, 2330
Zsp2I	ATGCAT	2 cut(s)	1082, 2221

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.